AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1182400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1182400 MtrunA17_Chr8g0338051 89.614 337 21 5 1 336 1 324 0.0 543
Msa1182400 MtrunA17_Chr4g0009941 30.216 278 144 10 72 330 2 248 5.12e-26 104
Msa1182400 MtrunA17_Chr7g0238901 30.000 280 142 10 72 330 76 322 6.84e-24 100
Msa1182400 MtrunA17_Chr4g0034391 33.493 209 100 9 68 253 70 262 1.85e-19 89.4
Msa1182400 MtrunA17_Chr4g0064601 30.651 261 147 10 74 330 56 286 1.38e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1182400 AT4G31530.1 76.136 264 54 1 72 335 69 323 1.79e-137 393
Msa1182400 AT4G31530.2 72.302 278 54 2 72 335 69 337 1.51e-133 384
Msa1182400 AT2G37660.1 31.502 273 133 11 79 330 79 318 2.23e-25 104
Msa1182400 AT5G02240.1 28.938 273 140 10 79 330 7 246 9.75e-23 95.9
Msa1182400 AT3G18890.1 31.660 259 129 11 73 311 78 308 2.46e-21 95.5
Msa1182400 AT2G34460.1 31.939 263 145 11 76 334 46 278 2.03e-20 90.1
Msa1182400 AT4G18810.1 25.424 177 102 5 50 207 103 268 5.97e-11 63.9
Msa1182400 AT4G18810.2 25.424 177 102 5 50 207 103 268 8.39e-11 63.5

Find 201 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAAAGTGGTTTCAATTT+TGG 0.080038 8_1:-17523707 Msa1182410:CDS
TTTAACTAACTCCTTGTAAA+TGG 0.124595 8_1:+17523886 Msa1182400:three_prime_UTR
TGATTCTTACCAACTCTTTC+TGG 0.132930 8_1:-17520558 None:intergenic
GAGATTGGATTGTTGTAATT+AGG 0.157177 8_1:-17518248 None:intergenic
CAGAGTTAACTTCGTATATT+TGG 0.162981 8_1:-17521584 None:intergenic
AGCCAAGTTGAGTGAATTTC+AGG 0.164430 8_1:-17522310 Msa1182410:CDS
CGTAGCATTATGAACCTATT+TGG 0.182500 8_1:+17521121 Msa1182400:CDS
TATACTTCTTCATTCATTAT+TGG 0.199218 8_1:+17521920 Msa1182400:three_prime_UTR
ATGAAACAAGTGCTTATAAT+TGG 0.199667 8_1:-17521991 None:intergenic
CTAATGGCAGCTACTCTAAA+TGG 0.209076 8_1:-17522276 Msa1182410:CDS
TGAATATAAACTTCTTATTC+AGG 0.212644 8_1:+17521947 Msa1182400:three_prime_UTR
AAAGACCATATTTGATTCTT+TGG 0.213929 8_1:-17523729 Msa1182410:CDS
GCAGCTTCACGCAGCTTAAT+TGG 0.215913 8_1:+17522345 Msa1182400:three_prime_UTR
TCCAAACTTGTCCTTGTTCT+TGG 0.216236 8_1:+17518389 Msa1182400:CDS
TCTTACCTAATTATAGTATA+TGG 0.230550 8_1:-17521196 None:intergenic
GCTTTCCATATACTATAATT+AGG 0.245017 8_1:+17521191 Msa1182400:CDS
GAAGTAGAAGATTGGGAGAT+TGG 0.258492 8_1:-17518263 None:intergenic
GAGGAATTTCTTCAGAATTC+TGG 0.258581 8_1:+17521169 Msa1182400:CDS
TAATCACTTTCAGGAGTCTT+AGG 0.258854 8_1:-17523420 Msa1182410:intron
AGTTTGATAGGCTTGGTGTT+AGG 0.272913 8_1:-17523063 Msa1182410:CDS
AGATTGGATTGTTGTAATTA+GGG 0.273367 8_1:-17518247 None:intergenic
GTCCTTGTTCTTGGTGGTTC+AGG 0.275808 8_1:+17518398 Msa1182400:CDS
GGTCCATCTGTCAACCTTCC+AGG 0.296760 8_1:-17521305 None:intergenic
CCGGAAATCAACGGTGTTAT+CGG 0.302126 8_1:-17524184 Msa1182410:CDS
CACTTCTGAGCATCATTTCC+AGG 0.302200 8_1:-17521779 None:intergenic
CATTCAAGTTTAAGTTTGAT+AGG 0.308178 8_1:-17523075 Msa1182410:CDS
GAATGGGTTTAAACCGGATT+TGG 0.310000 8_1:-17523912 Msa1182410:CDS
ACAGTATTGCATGAACCTTC+TGG 0.317360 8_1:-17522909 Msa1182410:intron
TGGATGGAATGACCTGGGTC+TGG 0.321021 8_1:+17524082 Msa1182400:three_prime_UTR
AATATCTTCTTCACAGTTGC+TGG 0.331916 8_1:+17522849 Msa1182400:three_prime_UTR
CAACGGCGAGCAGTGCTTAT+AGG 0.332728 8_1:+17521374 Msa1182400:CDS
CACAAGGAAGCATGATGATT+TGG 0.333240 8_1:+17520297 Msa1182400:CDS
TTCACGCAGCTTAATTGGTT+CGG 0.335996 8_1:+17522350 Msa1182400:three_prime_UTR
GCAATTTATATGCATCATAT+AGG 0.343736 8_1:+17521871 Msa1182400:three_prime_UTR
AAATTTGCTCGTAAATATCT+TGG 0.347281 8_1:+17524062 Msa1182400:three_prime_UTR
GTTTGATAGGCTTGGTGTTA+GGG 0.353707 8_1:-17523062 Msa1182410:CDS
CACGTTTAGAAGTAGAAGAT+TGG 0.355319 8_1:-17518271 None:intergenic
ATTGTTGTAATTAGGGAGTT+TGG 0.356898 8_1:-17518240 None:intergenic
GTTATTCTTGTATCATCAAT+AGG 0.359072 8_1:+17520772 Msa1182400:CDS
TGTTCTATCACCACGTAGTT+TGG 0.360785 8_1:+17523325 Msa1182400:three_prime_UTR
TTAAGTTGCGCTTGATACTT+AGG 0.362138 8_1:+17519913 Msa1182400:CDS
TTGTAAATGGGTACCAAATC+CGG 0.372687 8_1:+17523899 Msa1182400:three_prime_UTR
ATAGATAAATTTCATGAATA+CGG 0.372867 8_1:-17523385 Msa1182410:CDS
TGTACTTCAAGACACCAAAT+AGG 0.374552 8_1:-17521135 None:intergenic
ACCAAGAACAAGGACAAGTT+TGG 0.379863 8_1:-17518390 None:intergenic
CACATAGAGCCGGTTTGGTT+GGG 0.381130 8_1:+17523817 Msa1182400:three_prime_UTR
GAGAAAGCCAAGACACTGTT+TGG 0.384195 8_1:+17519942 Msa1182400:CDS
TCACGCAGCTTAATTGGTTC+GGG 0.385896 8_1:+17522351 Msa1182400:three_prime_UTR
TTGGAATCAGACGTGGAGAT+TGG 0.388447 8_1:+17524148 Msa1182400:three_prime_UTR
TACTTGTGTAAGTTGAATAA+TGG 0.389821 8_1:+17518145 Msa1182400:exon
TCAGGAAGAATTGGTACTAA+TGG 0.390432 8_1:-17522292 Msa1182410:CDS
TAATGGCAGCTACTCTAAAT+GGG 0.399582 8_1:-17522275 Msa1182410:CDS
CGTCTGATTCCAACTCCAAC+CGG 0.402368 8_1:-17524138 Msa1182410:CDS
TTAACTAACTCCTTGTAAAT+GGG 0.404427 8_1:+17523887 Msa1182400:three_prime_UTR
TGTGAGAAAGCAAAGCAAAA+TGG 0.408525 8_1:-17522150 Msa1182410:CDS
AAACTTGTCCTTGTTCTTGG+TGG 0.409074 8_1:+17518392 Msa1182400:CDS
TCATCATCCCACCGCCTTGA+AGG 0.413160 8_1:-17520528 None:intergenic
GAGTGAATTTCAGGAAGAAT+TGG 0.418836 8_1:-17522301 Msa1182410:CDS
ATGATGATGAGGGAATGTTT+TGG 0.419623 8_1:-17518364 None:intergenic
CAATTTATATGCATCATATA+GGG 0.425634 8_1:+17521872 Msa1182400:three_prime_UTR
ACGTTTAGAAGTAGAAGATT+GGG 0.426305 8_1:-17518270 None:intergenic
TGAACGAAGCCATCCATCAT+TGG 0.427002 8_1:+17523995 Msa1182400:three_prime_UTR
CGGTTTGGTTGGGTTGATGC+GGG 0.430268 8_1:+17523827 Msa1182400:three_prime_UTR
GGATGGAATGACCTGGGTCT+GGG 0.430844 8_1:+17524083 Msa1182400:three_prime_UTR
GTGGACTGCTTAAAGTTAGA+AGG 0.434355 8_1:+17522772 Msa1182400:three_prime_UTR
CATGTTCTCGATCAACTTCT+CGG 0.440999 8_1:+17522230 Msa1182400:three_prime_UTR
TTCAAGAAGCATTGTGAAGA+AGG 0.442527 8_1:-17523355 Msa1182410:CDS
GCTGCTGAGGCTTCGCTCCA+TGG 0.449801 8_1:+17524031 Msa1182400:three_prime_UTR
CCGGTTTGGTTGGGTTGATG+CGG 0.452888 8_1:+17523826 Msa1182400:three_prime_UTR
TGGAATCAGACGTGGAGATT+GGG 0.453311 8_1:+17524149 Msa1182400:three_prime_UTR
CTATCAAACTTAAACTTGAA+TGG 0.453816 8_1:+17523076 Msa1182400:three_prime_UTR
GATGGATGATCGTCATTTCC+AGG 0.457508 8_1:+17523277 Msa1182400:three_prime_UTR
GAATGCACATAGAGCCGGTT+TGG 0.457660 8_1:+17523812 Msa1182400:three_prime_UTR
ATGTTTCAGGGTGAAGGTCC+TGG 0.459105 8_1:+17521761 Msa1182400:intron
TTCCTGAAATTCACTCAACT+TGG 0.460240 8_1:+17522308 Msa1182400:three_prime_UTR
GGTTATGAATGGGTTTAAAC+CGG 0.462487 8_1:-17523918 Msa1182410:CDS
GCACATAGAGCCGGTTTGGT+TGG 0.465169 8_1:+17523816 Msa1182400:three_prime_UTR
CCTAGTCCAGATGACATTGT+TGG 0.467798 8_1:-17523106 Msa1182410:CDS
ATGACAGAGGCGGTTATGAA+TGG 0.467859 8_1:-17523929 Msa1182410:CDS
ATTTCTCCATGGATTGAGCC+AGG 0.471335 8_1:-17523025 Msa1182410:CDS
TTGTGATCGTTGGTTCGCTT+CGG 0.472288 8_1:-17523852 Msa1182410:CDS
CAACCATCTTTATTTCTCCA+TGG 0.477130 8_1:-17523036 Msa1182410:CDS
TGCATGGGCTGGAACATTTG+AGG 0.477714 8_1:-17522796 Msa1182410:CDS
GAATTGAACCCGGTTGGAGT+TGG 0.479110 8_1:+17524129 Msa1182400:three_prime_UTR
TTCGTCCAAAGAATCAAATA+TGG 0.479274 8_1:+17523724 Msa1182400:three_prime_UTR
TTTGGATCCATCCATGTTTG+AGG 0.480502 8_1:+17520315 Msa1182400:CDS
TAAGTTGCGCTTGATACTTA+GGG 0.482644 8_1:+17519914 Msa1182400:CDS
TCAGGACCAACAATGTCATC+TGG 0.490161 8_1:+17523100 Msa1182400:three_prime_UTR
CTTGGTGGTTCAGGCGGTGT+TGG 0.490175 8_1:+17518407 Msa1182400:CDS
AAACCGGCTCTATGTGCATT+CGG 0.490673 8_1:-17523810 Msa1182410:CDS
TGACAGAGGCGGTTATGAAT+GGG 0.491337 8_1:-17523928 Msa1182410:CDS
AAGTTTAAGTTTGATAGGCT+TGG 0.491369 8_1:-17523070 Msa1182410:CDS
CCATGGATTGAGCCAGGAAA+AGG 0.492155 8_1:-17523019 Msa1182410:intron
ACAAAGAGGGATGCATGGGC+TGG 0.493354 8_1:-17522807 Msa1182410:CDS
ACATTACTCAAAGCAACAGC+TGG 0.493897 8_1:+17521350 Msa1182400:CDS
AACTTAAACTTGAATGGCTC+AGG 0.493924 8_1:+17523082 Msa1182400:three_prime_UTR
TAGATAAATTTCATGAATAC+GGG 0.494752 8_1:-17523384 Msa1182410:CDS
GTCTTGAAGTACAAGAAGAT+GGG 0.495045 8_1:+17521145 Msa1182400:CDS
TTGTTCACCAAACAGTGTCT+TGG 0.499030 8_1:-17519949 None:intergenic
TTCAGCAACCACAATTCTAC+TGG 0.500117 8_1:-17521523 None:intergenic
CCATGGCAATTCATTACACT+TGG 0.500166 8_1:-17520800 None:intergenic
TTACGATCACGTGCCAATGC+CGG 0.500603 8_1:-17523140 Msa1182410:CDS
ATTAGGTATGCTTACCTCCA+TGG 0.503084 8_1:-17520817 None:intergenic
GAAGTGTATGAAACATTAAG+AGG 0.503321 8_1:-17523220 Msa1182410:CDS
AATGACACAAATAAGCTCAT+TGG 0.504718 8_1:-17523764 Msa1182410:CDS
GGAACTCCGTCCACCGGCAT+TGG 0.505974 8_1:+17523127 Msa1182400:three_prime_UTR
AGTTTGCGGTTTGTGATCGT+TGG 0.508199 8_1:-17523862 Msa1182410:CDS
CCGCATCAACCCAACCAAAC+CGG 0.508661 8_1:-17523826 Msa1182410:CDS
GAATGCTCATATTGTGATGT+TGG 0.517660 8_1:+17522879 Msa1182400:three_prime_UTR
TCATATTGTGATGTTGGAAA+TGG 0.518175 8_1:+17522885 Msa1182400:three_prime_UTR
TTGCTCGTAAATATCTTGGA+TGG 0.518777 8_1:+17524066 Msa1182400:three_prime_UTR
GCATGGGCTGGAACATTTGA+GGG 0.521357 8_1:-17522795 Msa1182410:CDS
TTTGATTCTTTGGACGAAAG+TGG 0.521512 8_1:-17523719 Msa1182410:CDS
GTGCATTCGGCCACGTCACA+TGG 0.523053 8_1:-17523797 Msa1182410:CDS
TTCGACTTGTTATCAATACC+TGG 0.526979 8_1:-17523295 Msa1182410:CDS
TGTCTTGAAGTACAAGAAGA+TGG 0.527274 8_1:+17521144 Msa1182400:CDS
GGATTTGGTACCCATTTACA+AGG 0.528252 8_1:-17523897 Msa1182410:CDS
CTTCTTCATTCATTATTGGA+AGG 0.529566 8_1:+17521924 Msa1182400:three_prime_UTR
GAATATAAACTTCTTATTCA+GGG 0.530107 8_1:+17521948 Msa1182400:three_prime_UTR
GGAGTTAGTTAAAGAGTTTG+CGG 0.531901 8_1:-17523876 Msa1182410:CDS
CATGGAGAAATAAAGATGGT+TGG 0.536049 8_1:+17523037 Msa1182400:three_prime_UTR
TTTGACAAAGAGGGATGCAT+GGG 0.538347 8_1:-17522811 Msa1182410:CDS
TTGAGATCATAAGACGTGTA+TGG 0.539437 8_1:-17521326 None:intergenic
CTGGGTCAACGTAGATTGAC+TGG 0.540860 8_1:+17524101 Msa1182400:three_prime_UTR
AGAAGCAGTTAAATATGTTG+AGG 0.543269 8_1:-17522199 Msa1182410:CDS
TTACCTGGACAATCAGTTCG+TGG 0.546945 8_1:+17522753 Msa1182400:intron
AAGAAAGAGAGTGAAACTGA+AGG 0.548534 8_1:-17518181 None:intergenic
CGCCTGAACCACCAAGAACA+AGG 0.551133 8_1:-17518400 None:intergenic
TATTTATTTGAAGATTGGGT+GGG 0.551280 8_1:+17520706 Msa1182400:intron
GCAAAGCAAAATGGAGCTGA+TGG 0.552812 8_1:-17522141 Msa1182410:CDS
ACTCATGTGATTTGCTGCAC+AGG 0.557364 8_1:+17520492 Msa1182400:CDS
GATTATTCACCACCGATCAC+AGG 0.558474 8_1:+17522035 Msa1182400:three_prime_UTR
CATTAAGAGGCAGTCCGCAA+TGG 0.560504 8_1:-17523207 Msa1182410:CDS
ATGTTCTCGATCAACTTCTC+GGG 0.561429 8_1:+17522231 Msa1182400:three_prime_UTR
GACACAAATAAGCTCATTGG+AGG 0.561936 8_1:-17523761 Msa1182410:CDS
CACGTGCCAATGCCGGTGGA+CGG 0.563655 8_1:-17523133 Msa1182410:CDS
GGTTGCTGAAGCTTGCGTAC+AGG 0.566427 8_1:+17521536 Msa1182400:CDS
AAGAACAAGGACAAGTTTGG+AGG 0.567335 8_1:-17518387 None:intergenic
AAGTTTGGAGGATGATGATG+AGG 0.568899 8_1:-17518375 None:intergenic
GTCACTGAATTGAACCCGGT+TGG 0.569195 8_1:+17524123 Msa1182400:three_prime_UTR
AGACCTGGAAGGTTGACAGA+TGG 0.569259 8_1:+17521302 Msa1182400:intron
CCAACAATGTCATCTGGACT+AGG 0.569750 8_1:+17523106 Msa1182400:three_prime_UTR
ATGCATATGTTTCAGGGTGA+AGG 0.572654 8_1:+17521755 Msa1182400:intron
GATCATCCATCTCACGATGT+AGG 0.573106 8_1:-17523265 Msa1182410:CDS
TGTAATTAGGGAGTTTGGTG+AGG 0.574655 8_1:-17518235 None:intergenic
TGAATATGATAGGTATTCAA+AGG 0.574682 8_1:+17520271 Msa1182400:intron
TCAAGAAGCATTGTGAAGAA+GGG 0.578757 8_1:-17523354 Msa1182410:CDS
AATCCATGGAGAAATAAAGA+TGG 0.580843 8_1:+17523033 Msa1182400:three_prime_UTR
GAAAATACACCAGAAAGAGT+TGG 0.580873 8_1:+17520549 Msa1182400:CDS
TTATTTATTTGAAGATTGGG+TGG 0.582766 8_1:+17520705 Msa1182400:intron
GAGTTTACCTCAAACATGGA+TGG 0.585827 8_1:-17520322 None:intergenic
CGATCACGTGCCAATGCCGG+TGG 0.586750 8_1:-17523137 Msa1182410:CDS
TGAAGAGTTTACCTCAAACA+TGG 0.589358 8_1:-17520326 None:intergenic
CCTTCTCCTACATCGTGAGA+TGG 0.589412 8_1:+17523259 Msa1182400:three_prime_UTR
CGAGCAGTGCTTATAGGTCA+AGG 0.592563 8_1:+17521380 Msa1182400:CDS
GAGAGGTTTCTGTGAGTCAG+TGG 0.594248 8_1:-17518330 None:intergenic
ATCTACGTTGACCCAGACCC+AGG 0.594366 8_1:-17524094 Msa1182410:CDS
TGGCCGAATGCACATAGAGC+CGG 0.596503 8_1:+17523807 Msa1182400:three_prime_UTR
AGTTTGGAGGATGATGATGA+GGG 0.596908 8_1:-17518374 None:intergenic
CTTGTTCTTGGTGGTTCAGG+CGG 0.597608 8_1:+17518401 Msa1182400:CDS
GAAGTGGCAAGAATTATTTG+TGG 0.603707 8_1:+17521796 Msa1182400:CDS
AAGTTGCCTCCAATGATGGA+TGG 0.606133 8_1:-17524004 Msa1182410:CDS
ATACGAAGTTAACTCTGTTG+AGG 0.606565 8_1:+17521590 Msa1182400:CDS
CTGGAAATGATGCTCAGAAG+TGG 0.606575 8_1:+17521780 Msa1182400:CDS
TCAAAGCAACAGCTGGGCAA+CGG 0.612805 8_1:+17521357 Msa1182400:CDS
CCATCTCACGATGTAGGAGA+AGG 0.613581 8_1:-17523259 Msa1182410:CDS
GTCTGATTCCAACTCCAACC+GGG 0.615760 8_1:-17524137 Msa1182410:CDS
TCCCTCAACCCGGAAATCAA+CGG 0.618124 8_1:-17524193 Msa1182410:CDS
ACAAGATGAAGAGAAACTGC+AGG 0.619181 8_1:+17519968 Msa1182400:CDS
TCTTGAAGTACAAGAAGATG+GGG 0.623108 8_1:+17521146 Msa1182400:CDS
ATATCTTGGATGGAATGACC+TGG 0.623346 8_1:+17524076 Msa1182400:three_prime_UTR
GTGATTACTTACGATGAACA+TGG 0.625748 8_1:-17523169 Msa1182410:CDS
AACAACATTTCATTCCATTG+CGG 0.629018 8_1:+17523193 Msa1182400:three_prime_UTR
GGACTAGGAACTCCGTCCAC+CGG 0.630848 8_1:+17523121 Msa1182400:three_prime_UTR
CTTTCAGGAGATAAACTAGT+GGG 0.632068 8_1:+17521495 Msa1182400:intron
ACGAAGCCATCCATCATTGG+AGG 0.636218 8_1:+17523998 Msa1182400:three_prime_UTR
AACAAACCTGTAGAAAAGGG+TGG 0.636809 8_1:+17523661 Msa1182400:intron
AACCTGTAGAAAAGGGTGGA+TGG 0.641177 8_1:+17523665 Msa1182400:intron
TATCTTGGATGGAATGACCT+GGG 0.641424 8_1:+17524077 Msa1182400:three_prime_UTR
CATTACTCAAAGCAACAGCT+GGG 0.641871 8_1:+17521351 Msa1182400:CDS
CCAAGTGTAATGAATTGCCA+TGG 0.645224 8_1:+17520800 Msa1182400:CDS
TTGTAGCATCACTGCTTCAG+CGG 0.646030 8_1:+17519886 Msa1182400:CDS
GCTAGTTAAGCCATGTGACG+TGG 0.653066 8_1:+17523787 Msa1182400:three_prime_UTR
GATGTTGGAAATGGTCCAGA+AGG 0.664520 8_1:+17522894 Msa1182400:three_prime_UTR
CTTGTATAACCTGTGATCGG+TGG 0.668023 8_1:-17522044 Msa1182410:CDS
AATGGCAGCTACTCTAAATG+GGG 0.671594 8_1:-17522274 Msa1182410:CDS
TGTCTTGTATAACCTGTGAT+CGG 0.673075 8_1:-17522047 Msa1182410:CDS
ACACAAATAAGCTCATTGGA+GGG 0.674023 8_1:-17523760 Msa1182410:CDS
AGTGTAATGAATTGCCATGG+AGG 0.674948 8_1:+17520803 Msa1182400:CDS
GGGTGAAGCCAGTAGAATTG+TGG 0.678142 8_1:+17521515 Msa1182400:CDS
GTTGGAGTTGGAATCAGACG+TGG 0.684438 8_1:+17524141 Msa1182400:three_prime_UTR
AGGTATTCAAAGGAGACACA+AGG 0.686371 8_1:+17520281 Msa1182400:intron
ACTGGTCACTGAATTGAACC+CGG 0.689925 8_1:+17524119 Msa1182400:three_prime_UTR
GCTTTCAGGAGATAAACTAG+TGG 0.695591 8_1:+17521494 Msa1182400:intron
GACAGTGACAATGACAGAGG+CGG 0.712697 8_1:-17523939 Msa1182410:CDS
CGCGACAGTGACAATGACAG+AGG 0.712747 8_1:-17523942 Msa1182410:CDS
ATTACTTACGATGAACATGG+AGG 0.726286 8_1:-17523166 Msa1182410:CDS
CTTGAAGTACAAGAAGATGG+GGG 0.735141 8_1:+17521147 Msa1182400:CDS
CTGTAGAAAAGGGTGGATGG+TGG 0.748685 8_1:+17523668 Msa1182400:intron
GCTTCGTTCAAAATGCAGCG+AGG 0.769826 8_1:-17523982 Msa1182410:CDS
AGGGAAATTACCAAACTACG+TGG 0.780325 8_1:-17523335 Msa1182410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACAATATGTAAATATTT+CGG - chr8_1:17518824-17518843 None:intergenic 10.0%
!!! ATTTTTATTTATTTGAAGAT+TGG + chr8_1:17520701-17520720 Msa1182400:intron 10.0%
!!! TTTTTATTTATTTGAAGATT+GGG + chr8_1:17520702-17520721 Msa1182400:intron 10.0%
!!! TATAATTTTATATACCTTTT+GGG - chr8_1:17522672-17522691 Msa1182410:intron 10.0%
!!! TTATAATTTTATATACCTTT+TGG - chr8_1:17522673-17522692 Msa1182410:intron 10.0%
!! AAATATTTGAAGATTGAAAT+AGG + chr8_1:17519046-17519065 Msa1182400:intron 15.0%
!! TAATTATAAAAATATTTCGG+TGG + chr8_1:17519371-17519390 Msa1182400:intron 15.0%
!! AATTATAAAAATATTTCGGT+GGG + chr8_1:17519372-17519391 Msa1182400:intron 15.0%
!!! AAATGCATTTTAAATATATG+AGG - chr8_1:17521281-17521300 None:intergenic 15.0%
!! ATAGATAAATTTCATGAATA+CGG - chr8_1:17523388-17523407 Msa1182410:CDS 15.0%
!!! TAATTTTCACTTCATTAAAA+TGG + chr8_1:17523570-17523589 Msa1182400:intron 15.0%
!! ATTTGATACAAGATATTATA+AGG + chr8_1:17523622-17523641 Msa1182400:intron 15.0%
!!! TTTGATTTTGAATTTGCTTT+AGG + chr8_1:17518538-17518557 Msa1182400:intron 20.0%
!! TTACGATGATTAAAATCAAA+TGG + chr8_1:17518886-17518905 Msa1182400:intron 20.0%
!! TCTAATAAGCTAATTTATAG+AGG + chr8_1:17519322-17519341 Msa1182400:intron 20.0%
!! TGCATAAAATAACACTAAAA+AGG - chr8_1:17519757-17519776 None:intergenic 20.0%
!!! TCATCAGTATTGTTTTTATT+TGG + chr8_1:17520382-17520401 Msa1182400:intron 20.0%
!! TAAACTGAGAACTAATTATT+AGG - chr8_1:17520837-17520856 None:intergenic 20.0%
!!! GCATTTATTGATTTAAGATT+CGG + chr8_1:17520954-17520973 Msa1182400:intron 20.0%
!!! ATGTAAACTATGTTGATAAA+TGG + chr8_1:17521063-17521082 Msa1182400:intron 20.0%
!! TCTTACCTAATTATAGTATA+TGG - chr8_1:17521199-17521218 None:intergenic 20.0%
!! TTAAATATATGAGGAGATTT+CGG - chr8_1:17521272-17521291 None:intergenic 20.0%
!! TAGGTATATATAGTTATACA+TGG + chr8_1:17521639-17521658 Msa1182400:intron 20.0%
!! CAATTTATATGCATCATATA+GGG + chr8_1:17521872-17521891 Msa1182400:three_prime_UTR 20.0%
!! TATACTTCTTCATTCATTAT+TGG + chr8_1:17521920-17521939 Msa1182400:three_prime_UTR 20.0%
!! TGAATATAAACTTCTTATTC+AGG + chr8_1:17521947-17521966 Msa1182400:three_prime_UTR 20.0%
!! GAATATAAACTTCTTATTCA+GGG + chr8_1:17521948-17521967 Msa1182400:three_prime_UTR 20.0%
!!! TGAAAGAAATTTTTGGAATT+GGG + chr8_1:17522078-17522097 Msa1182400:three_prime_UTR 20.0%
!!! ACAAATATTGATATTTTACC+TGG + chr8_1:17522738-17522757 Msa1182400:intron 20.0%
!! TAGATAAATTTCATGAATAC+GGG - chr8_1:17523387-17523406 Msa1182410:CDS 20.0%
!! TAATTCTATTAATCACTTTC+AGG - chr8_1:17523432-17523451 Msa1182410:intron 20.0%
!! TACTTGTGTAAGTTGAATAA+TGG + chr8_1:17518145-17518164 Msa1182400:exon 25.0%
! AGATTGGATTGTTGTAATTA+GGG - chr8_1:17518250-17518269 None:intergenic 25.0%
! TGAATTACAAATGAAAGAGA+AGG - chr8_1:17518455-17518474 None:intergenic 25.0%
! AATCAAACTAATTTCACTCA+AGG - chr8_1:17518525-17518544 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+CGG - chr8_1:17518568-17518587 None:intergenic 25.0%
! ATAAGTTGTTTATCCAAACA+TGG - chr8_1:17519087-17519106 None:intergenic 25.0%
!!! AGATACTAGTGATACTTTTT+GGG - chr8_1:17519286-17519305 None:intergenic 25.0%
!! TAGATACTAGTGATACTTTT+TGG - chr8_1:17519287-17519306 None:intergenic 25.0%
! AATAGTATTAACAACCTTGT+TGG + chr8_1:17519696-17519715 Msa1182400:intron 25.0%
!! TTGACTTGACTTAATATTCA+GGG + chr8_1:17519856-17519875 Msa1182400:intron 25.0%
! TGAATATGATAGGTATTCAA+AGG + chr8_1:17520271-17520290 Msa1182400:intron 25.0%
! CAATTTACCATATATTCTCT+TGG - chr8_1:17520426-17520445 None:intergenic 25.0%
! CAAGAGAATATATGGTAAAT+TGG + chr8_1:17520424-17520443 Msa1182400:intron 25.0%
! TGCATATATATTGCAGATTT+CGG + chr8_1:17520586-17520605 Msa1182400:intron 25.0%
! TTATTTATTTGAAGATTGGG+TGG + chr8_1:17520705-17520724 Msa1182400:intron 25.0%
! TATTTATTTGAAGATTGGGT+GGG + chr8_1:17520706-17520725 Msa1182400:intron 25.0%
! GTTATTCTTGTATCATCAAT+AGG + chr8_1:17520772-17520791 Msa1182400:CDS 25.0%
! GCTTTCCATATACTATAATT+AGG + chr8_1:17521191-17521210 Msa1182400:CDS 25.0%
! TAAATATATGAGGAGATTTC+GGG - chr8_1:17521271-17521290 None:intergenic 25.0%
!!! TTTAAAATGCATTTTAGACC+TGG + chr8_1:17521287-17521306 Msa1182400:intron 25.0%
! AATTATGCGATGAACATTAT+TGG - chr8_1:17521410-17521429 None:intergenic 25.0%
!!! AGCAAAAACACTTTTAGAAA+AGG - chr8_1:17521450-17521469 None:intergenic 25.0%
!! AAGTGTTAGAAATTTTGTGA+CGG + chr8_1:17521472-17521491 Msa1182400:intron 25.0%
!!! TCAGTGGTAATTTTGTTTTT+AGG + chr8_1:17521620-17521639 Msa1182400:intron 25.0%
!!! TTGATTCTATAATGGGATTT+TGG - chr8_1:17521685-17521704 None:intergenic 25.0%
!!! TACGGTTTTGATTCTATAAT+GGG - chr8_1:17521692-17521711 None:intergenic 25.0%
!!! TTACGGTTTTGATTCTATAA+TGG - chr8_1:17521693-17521712 None:intergenic 25.0%
! GCAATTTATATGCATCATAT+AGG + chr8_1:17521871-17521890 Msa1182400:three_prime_UTR 25.0%
! ATGAAACAAGTGCTTATAAT+TGG - chr8_1:17521994-17522013 None:intergenic 25.0%
!! CATCTTGTGAAAGAAATTTT+TGG + chr8_1:17522071-17522090 Msa1182400:three_prime_UTR 25.0%
!!! GTGAAAGAAATTTTTGGAAT+TGG + chr8_1:17522077-17522096 Msa1182400:three_prime_UTR 25.0%
! TACACAGATTAATCATAACA+TGG - chr8_1:17522944-17522963 Msa1182410:intron 25.0%
!! CATTCAAGTTTAAGTTTGAT+AGG - chr8_1:17523078-17523097 Msa1182410:CDS 25.0%
! CTATCAAACTTAAACTTGAA+TGG + chr8_1:17523076-17523095 Msa1182400:three_prime_UTR 25.0%
! CAAAAATTTAGAGAGAAACT+TGG - chr8_1:17523533-17523552 Msa1182410:intron 25.0%
! GACGTTAATCTATATTACAA+AGG + chr8_1:17523592-17523611 Msa1182400:intron 25.0%
! GATATTATAAGGTACGAAAA+TGG + chr8_1:17523633-17523652 Msa1182400:intron 25.0%
! AAAGACCATATTTGATTCTT+TGG - chr8_1:17523732-17523751 Msa1182410:CDS 25.0%
! TTTAACTAACTCCTTGTAAA+TGG + chr8_1:17523886-17523905 Msa1182400:three_prime_UTR 25.0%
! TTAACTAACTCCTTGTAAAT+GGG + chr8_1:17523887-17523906 Msa1182400:three_prime_UTR 25.0%
!! GATATTTACGAGCAAATTTT+TGG - chr8_1:17524061-17524080 Msa1182410:CDS 25.0%
!! AAATTTGCTCGTAAATATCT+TGG + chr8_1:17524062-17524081 Msa1182400:three_prime_UTR 25.0%
ATTGTTGTAATTAGGGAGTT+TGG - chr8_1:17518243-17518262 None:intergenic 30.0%
GAGATTGGATTGTTGTAATT+AGG - chr8_1:17518251-17518270 None:intergenic 30.0%
ACGTTTAGAAGTAGAAGATT+GGG - chr8_1:17518273-17518292 None:intergenic 30.0%
AAGGAAGAAGAATGAATGAA+TGG - chr8_1:17518436-17518455 None:intergenic 30.0%
TGAAACATTAAGAACCTGTT+TGG - chr8_1:17518799-17518818 None:intergenic 30.0%
TCAAACATTTATGCCATGTT+TGG + chr8_1:17519071-17519090 Msa1182400:intron 30.0%
ATAAGCTCTTTCAATAACAC+AGG + chr8_1:17519136-17519155 Msa1182400:intron 30.0%
! TGTTTTCATAAGTTACCCTA+AGG + chr8_1:17519198-17519217 Msa1182400:intron 30.0%
ATCACTAGTATCTATGTTAG+TGG + chr8_1:17519293-17519312 Msa1182400:intron 30.0%
TAATTTATAGAGGCCTTTAG+TGG + chr8_1:17519332-17519351 Msa1182400:intron 30.0%
ACATTTGTCATTGATCTCAA+CGG - chr8_1:17519560-17519579 None:intergenic 30.0%
TCTCATCGTTTACTTTCATA+TGG + chr8_1:17519593-17519612 Msa1182400:intron 30.0%
AATACGACATATTACCAACA+AGG - chr8_1:17519713-17519732 None:intergenic 30.0%
AATATGTCGTATTGTCATTG+TGG + chr8_1:17519720-17519739 Msa1182400:intron 30.0%
CAGAAAACAACTGTAAAATG+TGG + chr8_1:17519779-17519798 Msa1182400:intron 30.0%
!!! CTATGCCAATAGTTTTGATT+CGG + chr8_1:17519817-17519836 Msa1182400:intron 30.0%
!!! TATGCCAATAGTTTTGATTC+GGG + chr8_1:17519818-17519837 Msa1182400:intron 30.0%
!! GTTGACTTGACTTAATATTC+AGG + chr8_1:17519855-17519874 Msa1182400:intron 30.0%
AAAGAGCTCTTGAATATGAT+AGG + chr8_1:17520261-17520280 Msa1182400:intron 30.0%
GTATCAGTTATGTATTTGTC+AGG - chr8_1:17520357-17520376 None:intergenic 30.0%
TTACCATATATTCTCTTGGT+TGG - chr8_1:17520422-17520441 None:intergenic 30.0%
TTCTCTTTGATTATCCTTGT+AGG + chr8_1:17520464-17520483 Msa1182400:intron 30.0%
TCTCTTTGATTATCCTTGTA+GGG + chr8_1:17520465-17520484 Msa1182400:intron 30.0%
GAAATATATAGTTTCGTGTG+TGG + chr8_1:17520624-17520643 Msa1182400:intron 30.0%
! AAGAATAACTCTTTTCACTG+AGG - chr8_1:17520761-17520780 None:intergenic 30.0%
ATCAGCTAATTCTTCCATTA+AGG - chr8_1:17520920-17520939 None:intergenic 30.0%
!!! TAGCTGATACTTGTTTTTGT+TGG + chr8_1:17520932-17520951 Msa1182400:intron 30.0%
! GCCTTTCTTGATTTAAGATT+CGG + chr8_1:17521013-17521032 Msa1182400:intron 30.0%
ACCGAATCTTAAATCAAGAA+AGG - chr8_1:17521017-17521036 None:intergenic 30.0%
CAGAGTTAACTTCGTATATT+TGG - chr8_1:17521587-17521606 None:intergenic 30.0%
CTTCTTCATTCATTATTGGA+AGG + chr8_1:17521924-17521943 Msa1182400:three_prime_UTR 30.0%
!!! AAGAAATTTTTGGAATTGGG+TGG + chr8_1:17522081-17522100 Msa1182400:three_prime_UTR 30.0%
AGAAGCAGTTAAATATGTTG+AGG - chr8_1:17522202-17522221 Msa1182410:CDS 30.0%
TAAATAGTCAAGAAACACGA+TGG + chr8_1:17522398-17522417 Msa1182400:intron 30.0%
AATGTTACCTCAATTCATGT+TGG - chr8_1:17522558-17522577 Msa1182410:intron 30.0%
! ATTTTTACTTCACACCCAAA+AGG + chr8_1:17522655-17522674 Msa1182400:intron 30.0%
ATATAGTCACAGTAGAAGAA+AGG + chr8_1:17522700-17522719 Msa1182400:intron 30.0%
TCATATTGTGATGTTGGAAA+TGG + chr8_1:17522885-17522904 Msa1182400:three_prime_UTR 30.0%
! ATCTTATTCTTACCTTTTCC+TGG + chr8_1:17523007-17523026 Msa1182400:intron 30.0%
AATCCATGGAGAAATAAAGA+TGG + chr8_1:17523033-17523052 Msa1182400:three_prime_UTR 30.0%
! AAGTTTAAGTTTGATAGGCT+TGG - chr8_1:17523073-17523092 Msa1182410:CDS 30.0%
AACAACATTTCATTCCATTG+CGG + chr8_1:17523193-17523212 Msa1182400:three_prime_UTR 30.0%
GAAGTGTATGAAACATTAAG+AGG - chr8_1:17523223-17523242 Msa1182410:CDS 30.0%
AATGAACAAACCTGTAGAAA+AGG + chr8_1:17523657-17523676 Msa1182400:intron 30.0%
ATGAACAAACCTGTAGAAAA+GGG + chr8_1:17523658-17523677 Msa1182400:intron 30.0%
! ACGAAAGTGGTTTCAATTTT+GGG - chr8_1:17523709-17523728 Msa1182410:CDS 30.0%
TTCGTCCAAAGAATCAAATA+TGG + chr8_1:17523724-17523743 Msa1182400:three_prime_UTR 30.0%
! GAATCAAATATGGTCTTTTG+AGG + chr8_1:17523734-17523753 Msa1182400:three_prime_UTR 30.0%
AATGACACAAATAAGCTCAT+TGG - chr8_1:17523767-17523786 Msa1182410:CDS 30.0%
AAGAAAGAGAGTGAAACTGA+AGG - chr8_1:17518184-17518203 None:intergenic 35.0%
CACGTTTAGAAGTAGAAGAT+TGG - chr8_1:17518274-17518293 None:intergenic 35.0%
!! TTTTGGTTGTTCTCAATGAG+AGG - chr8_1:17518350-17518369 None:intergenic 35.0%
!! ATGATGATGAGGGAATGTTT+TGG - chr8_1:17518367-17518386 None:intergenic 35.0%
! AAACACTTGTGATACTGGTT+TGG - chr8_1:17518767-17518786 None:intergenic 35.0%
ATTTCTCAAAAATCCTGACC+AGG - chr8_1:17519020-17519039 None:intergenic 35.0%
TTAGTTCCATAAGCTCCTTA+GGG - chr8_1:17519216-17519235 None:intergenic 35.0%
AAAAAGTCAGCAACCACTAA+AGG - chr8_1:17519348-17519367 None:intergenic 35.0%
ATCAGTTAGTAGTTAGTTGC+TGG + chr8_1:17519433-17519452 Msa1182400:intron 35.0%
CGTATTGTCATTGTGGAATA+AGG + chr8_1:17519727-17519746 Msa1182400:intron 35.0%
!!! ATGCCAATAGTTTTGATTCG+GGG + chr8_1:17519819-17519838 Msa1182400:intron 35.0%
! TTAAGTTGCGCTTGATACTT+AGG + chr8_1:17519913-17519932 Msa1182400:CDS 35.0%
TAAGTTGCGCTTGATACTTA+GGG + chr8_1:17519914-17519933 Msa1182400:CDS 35.0%
TTAACAGACAGTGTAAGTCT+AGG + chr8_1:17520015-17520034 Msa1182400:intron 35.0%
GGTACCACAAAAGCAATTAA+GGG - chr8_1:17520180-17520199 None:intergenic 35.0%
TGGTACCACAAAAGCAATTA+AGG - chr8_1:17520181-17520200 None:intergenic 35.0%
TGAAGAGTTTACCTCAAACA+TGG - chr8_1:17520329-17520348 None:intergenic 35.0%
CATCCAACCAAGAGAATATA+TGG + chr8_1:17520416-17520435 Msa1182400:intron 35.0%
GAAAATACACCAGAAAGAGT+TGG + chr8_1:17520549-17520568 Msa1182400:CDS 35.0%
TGATTCTTACCAACTCTTTC+TGG - chr8_1:17520561-17520580 None:intergenic 35.0%
GCTTGAAAAGTTGACGATTA+AGG - chr8_1:17520656-17520675 None:intergenic 35.0%
! ATAACTCTTTTCACTGAGGA+AGG - chr8_1:17520757-17520776 None:intergenic 35.0%
AAAGAGTTTATAGCCGATCA+TGG - chr8_1:17520878-17520897 None:intergenic 35.0%
CGTAGCATTATGAACCTATT+TGG + chr8_1:17521121-17521140 Msa1182400:CDS 35.0%
TGTACTTCAAGACACCAAAT+AGG - chr8_1:17521138-17521157 None:intergenic 35.0%
TGTCTTGAAGTACAAGAAGA+TGG + chr8_1:17521144-17521163 Msa1182400:CDS 35.0%
GTCTTGAAGTACAAGAAGAT+GGG + chr8_1:17521145-17521164 Msa1182400:CDS 35.0%
TCTTGAAGTACAAGAAGATG+GGG + chr8_1:17521146-17521165 Msa1182400:CDS 35.0%
GAGGAATTTCTTCAGAATTC+TGG + chr8_1:17521169-17521188 Msa1182400:CDS 35.0%
! TTCGGGAACATTCAACATTT+TGG - chr8_1:17521254-17521273 None:intergenic 35.0%
! AAATGCATTTTAGACCTGGA+AGG + chr8_1:17521291-17521310 Msa1182400:intron 35.0%
TTGAGATCATAAGACGTGTA+TGG - chr8_1:17521329-17521348 None:intergenic 35.0%
CTTTCAGGAGATAAACTAGT+GGG + chr8_1:17521495-17521514 Msa1182400:intron 35.0%
ATACGAAGTTAACTCTGTTG+AGG + chr8_1:17521590-17521609 Msa1182400:CDS 35.0%
TGCTGAAATGCATATGTTTC+AGG + chr8_1:17521748-17521767 Msa1182400:intron 35.0%
GCTGAAATGCATATGTTTCA+GGG + chr8_1:17521749-17521768 Msa1182400:intron 35.0%
GAAGTGGCAAGAATTATTTG+TGG + chr8_1:17521796-17521815 Msa1182400:CDS 35.0%
TGTCTTGTATAACCTGTGAT+CGG - chr8_1:17522050-17522069 Msa1182410:CDS 35.0%
TGTGAGAAAGCAAAGCAAAA+TGG - chr8_1:17522153-17522172 Msa1182410:CDS 35.0%
TAATGGCAGCTACTCTAAAT+GGG - chr8_1:17522278-17522297 Msa1182410:CDS 35.0%
TCAGGAAGAATTGGTACTAA+TGG - chr8_1:17522295-17522314 Msa1182410:CDS 35.0%
GAGTGAATTTCAGGAAGAAT+TGG - chr8_1:17522304-17522323 Msa1182410:CDS 35.0%
TTCCTGAAATTCACTCAACT+TGG + chr8_1:17522308-17522327 Msa1182400:three_prime_UTR 35.0%
TCCCTCTTTGTCAAAAATTC+AGG + chr8_1:17522819-17522838 Msa1182400:three_prime_UTR 35.0%
! CCCTGAATTTTTGACAAAGA+GGG - chr8_1:17522823-17522842 Msa1182410:CDS 35.0%
CCCTCTTTGTCAAAAATTCA+GGG + chr8_1:17522820-17522839 Msa1182400:three_prime_UTR 35.0%
! TCCCTGAATTTTTGACAAAG+AGG - chr8_1:17522824-17522843 Msa1182410:CDS 35.0%
AATATCTTCTTCACAGTTGC+TGG + chr8_1:17522849-17522868 Msa1182400:three_prime_UTR 35.0%
GAATGCTCATATTGTGATGT+TGG + chr8_1:17522879-17522898 Msa1182400:three_prime_UTR 35.0%
! CAACCATCTTTATTTCTCCA+TGG - chr8_1:17523039-17523058 Msa1182410:CDS 35.0%
CATGGAGAAATAAAGATGGT+TGG + chr8_1:17523037-17523056 Msa1182400:three_prime_UTR 35.0%
AACTTAAACTTGAATGGCTC+AGG + chr8_1:17523082-17523101 Msa1182400:three_prime_UTR 35.0%
ATTACTTACGATGAACATGG+AGG - chr8_1:17523169-17523188 Msa1182410:CDS 35.0%
GTGATTACTTACGATGAACA+TGG - chr8_1:17523172-17523191 Msa1182410:CDS 35.0%
!! TTCGACTTGTTATCAATACC+TGG - chr8_1:17523298-17523317 Msa1182410:CDS 35.0%
!! TCAAGAAGCATTGTGAAGAA+GGG - chr8_1:17523357-17523376 Msa1182410:CDS 35.0%
!! TTCAAGAAGCATTGTGAAGA+AGG - chr8_1:17523358-17523377 Msa1182410:CDS 35.0%
TAATCACTTTCAGGAGTCTT+AGG - chr8_1:17523423-17523442 Msa1182410:intron 35.0%
! GACGAAAGTGGTTTCAATTT+TGG - chr8_1:17523710-17523729 Msa1182410:CDS 35.0%
TTTGATTCTTTGGACGAAAG+TGG - chr8_1:17523722-17523741 Msa1182410:CDS 35.0%
ACACAAATAAGCTCATTGGA+GGG - chr8_1:17523763-17523782 Msa1182410:CDS 35.0%
GGAGTTAGTTAAAGAGTTTG+CGG - chr8_1:17523879-17523898 Msa1182410:CDS 35.0%
TTGTAAATGGGTACCAAATC+CGG + chr8_1:17523899-17523918 Msa1182400:three_prime_UTR 35.0%
! GGTTATGAATGGGTTTAAAC+CGG - chr8_1:17523921-17523940 Msa1182410:CDS 35.0%
AAAAAAGTTGCCTCCAATGA+TGG - chr8_1:17524011-17524030 Msa1182410:CDS 35.0%
!! AGCAAATTTTTGGAGAACCA+TGG - chr8_1:17524051-17524070 Msa1182410:CDS 35.0%
TTGCTCGTAAATATCTTGGA+TGG + chr8_1:17524066-17524085 Msa1182400:three_prime_UTR 35.0%
! TGTAATTAGGGAGTTTGGTG+AGG - chr8_1:17518238-17518257 None:intergenic 40.0%
GAAGTAGAAGATTGGGAGAT+TGG - chr8_1:17518266-17518285 None:intergenic 40.0%
! AGTTTGGAGGATGATGATGA+GGG - chr8_1:17518377-17518396 None:intergenic 40.0%
! AAGTTTGGAGGATGATGATG+AGG - chr8_1:17518378-17518397 None:intergenic 40.0%
AAGAACAAGGACAAGTTTGG+AGG - chr8_1:17518390-17518409 None:intergenic 40.0%
TCCAAACTTGTCCTTGTTCT+TGG + chr8_1:17518389-17518408 Msa1182400:CDS 40.0%
ACCAAGAACAAGGACAAGTT+TGG - chr8_1:17518393-17518412 None:intergenic 40.0%
AAACTTGTCCTTGTTCTTGG+TGG + chr8_1:17518392-17518411 Msa1182400:CDS 40.0%
AGCACAAACACTTGTGATAC+TGG - chr8_1:17518772-17518791 None:intergenic 40.0%
TGTTTGTGCTCAATCCAAAC+AGG + chr8_1:17518782-17518801 Msa1182400:intron 40.0%
CTCAAGGACTCAAGGTAAAT+TGG - chr8_1:17518925-17518944 None:intergenic 40.0%
GATACAAATCAGATGGCTCA+AGG - chr8_1:17518941-17518960 None:intergenic 40.0%
! GCCATCTGATTTGTATCCAA+TGG + chr8_1:17518944-17518963 Msa1182400:intron 40.0%
GCCATTGGATACAAATCAGA+TGG - chr8_1:17518948-17518967 None:intergenic 40.0%
AGTATGCTAGTTCAAGCCAT+TGG - chr8_1:17518963-17518982 None:intergenic 40.0%
CCCAGAGTAAAAAAACCCAA+CGG - chr8_1:17518993-17519012 None:intergenic 40.0%
!!! CCGTTGGGTTTTTTTACTCT+GGG + chr8_1:17518990-17519009 Msa1182400:intron 40.0%
!!! CGTTGGGTTTTTTTACTCTG+GGG + chr8_1:17518991-17519010 Msa1182400:intron 40.0%
AAGTTACCCTAAGGAGCTTA+TGG + chr8_1:17519207-17519226 Msa1182400:intron 40.0%
CTTAGTTCCATAAGCTCCTT+AGG - chr8_1:17519217-17519236 None:intergenic 40.0%
TAGTATAGCTCACATGTCCT+TGG - chr8_1:17519639-17519658 None:intergenic 40.0%
ACTCCCCGAATCAAAACTAT+TGG - chr8_1:17519825-17519844 None:intergenic 40.0%
TTGTTCACCAAACAGTGTCT+TGG - chr8_1:17519952-17519971 None:intergenic 40.0%
ACAAGATGAAGAGAAACTGC+AGG + chr8_1:17519968-17519987 Msa1182400:CDS 40.0%
! GTGTAAGTCTAGGACTTGTT+CGG + chr8_1:17520025-17520044 Msa1182400:intron 40.0%
! TCTAGGACTTGTTCGGTTTA+GGG + chr8_1:17520032-17520051 Msa1182400:intron 40.0%
!! AAGGCCCTTAATTGCTTTTG+TGG + chr8_1:17520173-17520192 Msa1182400:intron 40.0%
!! CAAAGCTTTTTCTTCCTTGG+TGG - chr8_1:17520201-17520220 None:intergenic 40.0%
!! CCACAAAGCTTTTTCTTCCT+TGG - chr8_1:17520204-17520223 None:intergenic 40.0%
CCAAGGAAGAAAAAGCTTTG+TGG + chr8_1:17520201-17520220 Msa1182400:intron 40.0%
AGGTATTCAAAGGAGACACA+AGG + chr8_1:17520281-17520300 Msa1182400:intron 40.0%
! CACAAGGAAGCATGATGATT+TGG + chr8_1:17520297-17520316 Msa1182400:CDS 40.0%
TTTGGATCCATCCATGTTTG+AGG + chr8_1:17520315-17520334 Msa1182400:CDS 40.0%
GAGTTTACCTCAAACATGGA+TGG - chr8_1:17520325-17520344 None:intergenic 40.0%
! GAACAACAGCTTTTCCTTCA+AGG + chr8_1:17520514-17520533 Msa1182400:CDS 40.0%
CCATGGCAATTCATTACACT+TGG - chr8_1:17520803-17520822 None:intergenic 40.0%
CCAAGTGTAATGAATTGCCA+TGG + chr8_1:17520800-17520819 Msa1182400:CDS 40.0%
AGTGTAATGAATTGCCATGG+AGG + chr8_1:17520803-17520822 Msa1182400:CDS 40.0%
ATTAGGTATGCTTACCTCCA+TGG - chr8_1:17520820-17520839 None:intergenic 40.0%
TAGTGTAGCCTATCCATGAT+CGG + chr8_1:17520862-17520881 Msa1182400:intron 40.0%
GTTTATAGCCGATCATGGAT+AGG - chr8_1:17520873-17520892 None:intergenic 40.0%
ATTAAGGTCACACTAGATGC+TGG - chr8_1:17520904-17520923 None:intergenic 40.0%
AGCATCTAGTGTGACCTTAA+TGG + chr8_1:17520903-17520922 Msa1182400:intron 40.0%
! AGATTCGGTTTCACTACGTA+TGG + chr8_1:17520969-17520988 Msa1182400:intron 40.0%
! GTTACTACCATGCTACTTGT+TGG + chr8_1:17520991-17521010 Msa1182400:intron 40.0%
CTTGAAGTACAAGAAGATGG+GGG + chr8_1:17521147-17521166 Msa1182400:CDS 40.0%
ACATTACTCAAAGCAACAGC+TGG + chr8_1:17521350-17521369 Msa1182400:CDS 40.0%
CATTACTCAAAGCAACAGCT+GGG + chr8_1:17521351-17521370 Msa1182400:CDS 40.0%
! GAAATTTTGTGACGGCTTTC+AGG + chr8_1:17521480-17521499 Msa1182400:intron 40.0%
GCTTTCAGGAGATAAACTAG+TGG + chr8_1:17521494-17521513 Msa1182400:intron 40.0%
TTCAGCAACCACAATTCTAC+TGG - chr8_1:17521526-17521545 None:intergenic 40.0%
CTGTTGAGGTAAACTTTCAG+TGG + chr8_1:17521604-17521623 Msa1182400:intron 40.0%
ATGCATATGTTTCAGGGTGA+AGG + chr8_1:17521755-17521774 Msa1182400:intron 40.0%
CATGTTCTCGATCAACTTCT+CGG + chr8_1:17522230-17522249 Msa1182400:three_prime_UTR 40.0%
ATGTTCTCGATCAACTTCTC+GGG + chr8_1:17522231-17522250 Msa1182400:three_prime_UTR 40.0%
AATGGCAGCTACTCTAAATG+GGG - chr8_1:17522277-17522296 Msa1182410:CDS 40.0%
CTAATGGCAGCTACTCTAAA+TGG - chr8_1:17522279-17522298 Msa1182410:CDS 40.0%
! AGCCAAGTTGAGTGAATTTC+AGG - chr8_1:17522313-17522332 Msa1182410:CDS 40.0%
TTCACGCAGCTTAATTGGTT+CGG + chr8_1:17522350-17522369 Msa1182400:three_prime_UTR 40.0%
TAGTCAAGAAACACGATGGA+TGG + chr8_1:17522402-17522421 Msa1182400:intron 40.0%
GTCTGATCCAACATGAATTG+AGG + chr8_1:17522548-17522567 Msa1182400:intron 40.0%
! GTGGACTGCTTAAAGTTAGA+AGG + chr8_1:17522772-17522791 Msa1182400:three_prime_UTR 40.0%
TTTGACAAAGAGGGATGCAT+GGG - chr8_1:17522814-17522833 Msa1182410:CDS 40.0%
! TTTTGACAAAGAGGGATGCA+TGG - chr8_1:17522815-17522834 Msa1182410:CDS 40.0%
ACAGTATTGCATGAACCTTC+TGG - chr8_1:17522912-17522931 Msa1182410:intron 40.0%
!! GTTTGATAGGCTTGGTGTTA+GGG - chr8_1:17523065-17523084 Msa1182410:CDS 40.0%
!! AGTTTGATAGGCTTGGTGTT+AGG - chr8_1:17523066-17523085 Msa1182410:CDS 40.0%
TGTTCTATCACCACGTAGTT+TGG + chr8_1:17523325-17523344 Msa1182400:three_prime_UTR 40.0%
AGGGAAATTACCAAACTACG+TGG - chr8_1:17523338-17523357 Msa1182410:CDS 40.0%
AACAAACCTGTAGAAAAGGG+TGG + chr8_1:17523661-17523680 Msa1182400:intron 40.0%
GACACAAATAAGCTCATTGG+AGG - chr8_1:17523764-17523783 Msa1182410:CDS 40.0%
! GGATTTGGTACCCATTTACA+AGG - chr8_1:17523900-17523919 Msa1182410:CDS 40.0%
! GAATGGGTTTAAACCGGATT+TGG - chr8_1:17523915-17523934 Msa1182410:CDS 40.0%
!!! ATTGTCACTGTCGCGTTTTT+TGG + chr8_1:17523950-17523969 Msa1182400:three_prime_UTR 40.0%
ATATCTTGGATGGAATGACC+TGG + chr8_1:17524076-17524095 Msa1182400:three_prime_UTR 40.0%
TATCTTGGATGGAATGACCT+GGG + chr8_1:17524077-17524096 Msa1182400:three_prime_UTR 40.0%
CTTGAACTAGCATACTGCAG+TGG + chr8_1:17518967-17518986 Msa1182400:intron 45.0%
!!! GCCGTTGGGTTTTTTTACTC+TGG + chr8_1:17518989-17519008 Msa1182400:intron 45.0%
!!! TTTTTTACTCTGGGGAGTCC+TGG + chr8_1:17518999-17519018 Msa1182400:intron 45.0%
TGCTGGCAATCTGTTACAGT+TGG + chr8_1:17519450-17519469 Msa1182400:intron 45.0%
CAGAGTCTAGTTACGATCCA+AGG + chr8_1:17519619-17519638 Msa1182400:intron 45.0%
TTGTAGCATCACTGCTTCAG+CGG + chr8_1:17519886-17519905 Msa1182400:CDS 45.0%
GAGAAAGCCAAGACACTGTT+TGG + chr8_1:17519942-17519961 Msa1182400:CDS 45.0%
! GTCTAGGACTTGTTCGGTTT+AGG + chr8_1:17520031-17520050 Msa1182400:intron 45.0%
!! TTGCTTTTGTGGTACCACCA+AGG + chr8_1:17520184-17520203 Msa1182400:intron 45.0%
!! ACTCATGTGATTTGCTGCAC+AGG + chr8_1:17520492-17520511 Msa1182400:CDS 45.0%
! CAACAGCTTTTCCTTCAAGG+CGG + chr8_1:17520517-17520536 Msa1182400:CDS 45.0%
AGAAAGGCCAACAAGTAGCA+TGG - chr8_1:17521001-17521020 None:intergenic 45.0%
CACTTCTGAGCATCATTTCC+AGG - chr8_1:17521782-17521801 None:intergenic 45.0%
CTGGAAATGATGCTCAGAAG+TGG + chr8_1:17521780-17521799 Msa1182400:CDS 45.0%
GATTATTCACCACCGATCAC+AGG + chr8_1:17522035-17522054 Msa1182400:three_prime_UTR 45.0%
CTTGTATAACCTGTGATCGG+TGG - chr8_1:17522047-17522066 Msa1182410:CDS 45.0%
GCAAAGCAAAATGGAGCTGA+TGG - chr8_1:17522144-17522163 Msa1182410:CDS 45.0%
! TCACGCAGCTTAATTGGTTC+GGG + chr8_1:17522351-17522370 Msa1182400:three_prime_UTR 45.0%
TTACCTGGACAATCAGTTCG+TGG + chr8_1:17522753-17522772 Msa1182400:intron 45.0%
GATGTTGGAAATGGTCCAGA+AGG + chr8_1:17522894-17522913 Msa1182400:three_prime_UTR 45.0%
! ATTTCTCCATGGATTGAGCC+AGG - chr8_1:17523028-17523047 Msa1182410:CDS 45.0%
GATCATCCATCTCACGATGT+AGG - chr8_1:17523268-17523287 Msa1182410:CDS 45.0%
GATGGATGATCGTCATTTCC+AGG + chr8_1:17523277-17523296 Msa1182400:three_prime_UTR 45.0%
AACCTGTAGAAAAGGGTGGA+TGG + chr8_1:17523665-17523684 Msa1182400:intron 45.0%
! AAACCGGCTCTATGTGCATT+CGG - chr8_1:17523813-17523832 Msa1182410:CDS 45.0%
!! TTGTGATCGTTGGTTCGCTT+CGG - chr8_1:17523855-17523874 Msa1182410:CDS 45.0%
AGTTTGCGGTTTGTGATCGT+TGG - chr8_1:17523865-17523884 Msa1182410:CDS 45.0%
TGACAGAGGCGGTTATGAAT+GGG - chr8_1:17523931-17523950 Msa1182410:CDS 45.0%
ATGACAGAGGCGGTTATGAA+TGG - chr8_1:17523932-17523951 Msa1182410:CDS 45.0%
TGAACGAAGCCATCCATCAT+TGG + chr8_1:17523995-17524014 Msa1182400:three_prime_UTR 45.0%
! AAGTTGCCTCCAATGATGGA+TGG - chr8_1:17524007-17524026 Msa1182410:CDS 45.0%
!!! AGGCAACTTTTTTGCTGCTG+AGG + chr8_1:17524018-17524037 Msa1182400:three_prime_UTR 45.0%
ACTGGTCACTGAATTGAACC+CGG + chr8_1:17524119-17524138 Msa1182400:three_prime_UTR 45.0%
TTGGAATCAGACGTGGAGAT+TGG + chr8_1:17524148-17524167 Msa1182400:three_prime_UTR 45.0%
TGGAATCAGACGTGGAGATT+GGG + chr8_1:17524149-17524168 Msa1182400:three_prime_UTR 45.0%
!! TACTAATTATAAAAATATTT+CGG + chr8_1:17519368-17519387 Msa1182400:intron 5.0%
!!! TTTTTTTTTTTTTAACAAAA+AGG + chr8_1:17520154-17520173 Msa1182400:intron 5.0%
!!! TAAAAATATTAAGAATTTTA+CGG - chr8_1:17521710-17521729 None:intergenic 5.0%
GAGAGGTTTCTGTGAGTCAG+TGG - chr8_1:17518333-17518352 None:intergenic 50.0%
! GTCCTTGTTCTTGGTGGTTC+AGG + chr8_1:17518398-17518417 Msa1182400:CDS 50.0%
! CTTGTTCTTGGTGGTTCAGG+CGG + chr8_1:17518401-17518420 Msa1182400:CDS 50.0%
! TGCTTTAGGCTCACCGTGTT+TGG + chr8_1:17518552-17518571 Msa1182400:intron 50.0%
TCAGATGGCTCAAGGACTCA+AGG - chr8_1:17518933-17518952 None:intergenic 50.0%
CACATGAGTGACTCCCTACA+AGG - chr8_1:17520481-17520500 None:intergenic 50.0%
! AGCTTTTCCTTCAAGGCGGT+GGG + chr8_1:17520521-17520540 Msa1182400:CDS 50.0%
GAAGTACAAGAAGATGGGGG+AGG + chr8_1:17521150-17521169 Msa1182400:CDS 50.0%
AGACCTGGAAGGTTGACAGA+TGG + chr8_1:17521302-17521321 Msa1182400:intron 50.0%
TCAAAGCAACAGCTGGGCAA+CGG + chr8_1:17521357-17521376 Msa1182400:CDS 50.0%
CGAGCAGTGCTTATAGGTCA+AGG + chr8_1:17521380-17521399 Msa1182400:CDS 50.0%
GGGTGAAGCCAGTAGAATTG+TGG + chr8_1:17521515-17521534 Msa1182400:CDS 50.0%
ATGTTTCAGGGTGAAGGTCC+TGG + chr8_1:17521761-17521780 Msa1182400:intron 50.0%
GCAGCTTCACGCAGCTTAAT+TGG + chr8_1:17522345-17522364 Msa1182400:three_prime_UTR 50.0%
AGTCCACGAACTGATTGTCC+AGG - chr8_1:17522759-17522778 Msa1182410:CDS 50.0%
!! GCATGGGCTGGAACATTTGA+GGG - chr8_1:17522798-17522817 Msa1182410:CDS 50.0%
!! TGCATGGGCTGGAACATTTG+AGG - chr8_1:17522799-17522818 Msa1182410:CDS 50.0%
! CCATGGATTGAGCCAGGAAA+AGG - chr8_1:17523022-17523041 Msa1182410:CDS 50.0%
! CCTTTTCCTGGCTCAATCCA+TGG + chr8_1:17523019-17523038 Msa1182400:intron 50.0%
TTACGATCACGTGCCAATGC+CGG - chr8_1:17523143-17523162 Msa1182410:CDS 50.0%
CATTAAGAGGCAGTCCGCAA+TGG - chr8_1:17523210-17523229 Msa1182410:CDS 50.0%
CCATCTCACGATGTAGGAGA+AGG - chr8_1:17523262-17523281 Msa1182410:CDS 50.0%
CCTTCTCCTACATCGTGAGA+TGG + chr8_1:17523259-17523278 Msa1182400:three_prime_UTR 50.0%
! CACCATCCACCCTTTTCTAC+AGG - chr8_1:17523670-17523689 Msa1182410:CDS 50.0%
CTGTAGAAAAGGGTGGATGG+TGG + chr8_1:17523668-17523687 Msa1182400:intron 50.0%
GCTAGTTAAGCCATGTGACG+TGG + chr8_1:17523787-17523806 Msa1182400:three_prime_UTR 50.0%
GAATGCACATAGAGCCGGTT+TGG + chr8_1:17523812-17523831 Msa1182400:three_prime_UTR 50.0%
!! CACATAGAGCCGGTTTGGTT+GGG + chr8_1:17523817-17523836 Msa1182400:three_prime_UTR 50.0%
GACAGTGACAATGACAGAGG+CGG - chr8_1:17523942-17523961 Msa1182410:CDS 50.0%
GCTTCGTTCAAAATGCAGCG+AGG - chr8_1:17523985-17524004 Msa1182410:CDS 50.0%
ACGAAGCCATCCATCATTGG+AGG + chr8_1:17523998-17524017 Msa1182400:three_prime_UTR 50.0%
CTGGGTCAACGTAGATTGAC+TGG + chr8_1:17524101-17524120 Msa1182400:three_prime_UTR 50.0%
GTCACTGAATTGAACCCGGT+TGG + chr8_1:17524123-17524142 Msa1182400:three_prime_UTR 50.0%
GAATTGAACCCGGTTGGAGT+TGG + chr8_1:17524129-17524148 Msa1182400:three_prime_UTR 50.0%
GTCTGATTCCAACTCCAACC+GGG - chr8_1:17524140-17524159 Msa1182410:CDS 50.0%
CGTCTGATTCCAACTCCAAC+CGG - chr8_1:17524141-17524160 Msa1182410:CDS 50.0%
GTTGGAGTTGGAATCAGACG+TGG + chr8_1:17524141-17524160 Msa1182400:three_prime_UTR 50.0%
CGCCTGAACCACCAAGAACA+AGG - chr8_1:17518403-17518422 None:intergenic 55.0%
TAGCATACTGCAGTGGCCGT+TGG + chr8_1:17518974-17518993 Msa1182400:intron 55.0%
AGCATACTGCAGTGGCCGTT+GGG + chr8_1:17518975-17518994 Msa1182400:intron 55.0%
! CAGCTTTTCCTTCAAGGCGG+TGG + chr8_1:17520520-17520539 Msa1182400:CDS 55.0%
TCATCATCCCACCGCCTTGA+AGG - chr8_1:17520531-17520550 None:intergenic 55.0%
GGTCCATCTGTCAACCTTCC+AGG - chr8_1:17521308-17521327 None:intergenic 55.0%
CAACGGCGAGCAGTGCTTAT+AGG + chr8_1:17521374-17521393 Msa1182400:CDS 55.0%
GGTTGCTGAAGCTTGCGTAC+AGG + chr8_1:17521536-17521555 Msa1182400:CDS 55.0%
ACAAAGAGGGATGCATGGGC+TGG - chr8_1:17522810-17522829 Msa1182410:CDS 55.0%
TGGCCGAATGCACATAGAGC+CGG + chr8_1:17523807-17523826 Msa1182400:three_prime_UTR 55.0%
!! GCACATAGAGCCGGTTTGGT+TGG + chr8_1:17523816-17523835 Msa1182400:three_prime_UTR 55.0%
CCGCATCAACCCAACCAAAC+CGG - chr8_1:17523829-17523848 Msa1182410:CDS 55.0%
!! CCGGTTTGGTTGGGTTGATG+CGG + chr8_1:17523826-17523845 Msa1182400:three_prime_UTR 55.0%
!! CGGTTTGGTTGGGTTGATGC+GGG + chr8_1:17523827-17523846 Msa1182400:three_prime_UTR 55.0%
CGCGACAGTGACAATGACAG+AGG - chr8_1:17523945-17523964 Msa1182410:CDS 55.0%
TGGATGGAATGACCTGGGTC+TGG + chr8_1:17524082-17524101 Msa1182400:three_prime_UTR 55.0%
GGATGGAATGACCTGGGTCT+GGG + chr8_1:17524083-17524102 Msa1182400:three_prime_UTR 55.0%
ATCTACGTTGACCCAGACCC+AGG - chr8_1:17524097-17524116 Msa1182410:CDS 55.0%
! CTTGGTGGTTCAGGCGGTGT+TGG + chr8_1:17518407-17518426 Msa1182400:CDS 60.0%
! TACTCTGGGGAGTCCTGGTC+AGG + chr8_1:17519004-17519023 Msa1182400:intron 60.0%
GTCTAGTCAGCTAGAGCGCG+CGG - chr8_1:17521822-17521841 None:intergenic 60.0%
GGACTAGGAACTCCGTCCAC+CGG + chr8_1:17523121-17523140 Msa1182400:three_prime_UTR 60.0%
GTGCATTCGGCCACGTCACA+TGG - chr8_1:17523800-17523819 Msa1182410:CDS 60.0%
GGAACTCCGTCCACCGGCAT+TGG + chr8_1:17523127-17523146 Msa1182400:three_prime_UTR 65.0%
CACGTGCCAATGCCGGTGGA+CGG - chr8_1:17523136-17523155 Msa1182410:CDS 65.0%
CGATCACGTGCCAATGCCGG+TGG - chr8_1:17523140-17523159 Msa1182410:CDS 65.0%
GCTGCTGAGGCTTCGCTCCA+TGG + chr8_1:17524031-17524050 Msa1182400:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 17518112 17524201 17518112 ID=Msa1182400;Name=Msa1182400
chr8_1 mRNA 17518112 17524201 17518112 ID=Msa1182400-mRNA-1;Parent=Msa1182400;Name=Msa1182400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=52|0.90|0.91|1|0.72|0.66|12|1661|336
chr8_1 exon 17518112 17518428 17518112 ID=Msa1182400-mRNA-1:exon:6529;Parent=Msa1182400-mRNA-1
chr8_1 exon 17519877 17519989 17519877 ID=Msa1182400-mRNA-1:exon:6530;Parent=Msa1182400-mRNA-1
chr8_1 exon 17520283 17520336 17520283 ID=Msa1182400-mRNA-1:exon:6531;Parent=Msa1182400-mRNA-1
chr8_1 exon 17520486 17520570 17520486 ID=Msa1182400-mRNA-1:exon:6532;Parent=Msa1182400-mRNA-1
chr8_1 exon 17520719 17520824 17520719 ID=Msa1182400-mRNA-1:exon:6533;Parent=Msa1182400-mRNA-1
chr8_1 exon 17521099 17521212 17521099 ID=Msa1182400-mRNA-1:exon:6534;Parent=Msa1182400-mRNA-1
chr8_1 exon 17521304 17521401 17521304 ID=Msa1182400-mRNA-1:exon:6535;Parent=Msa1182400-mRNA-1
chr8_1 exon 17521502 17521611 17521502 ID=Msa1182400-mRNA-1:exon:6536;Parent=Msa1182400-mRNA-1
chr8_1 exon 17521770 17522384 17521770 ID=Msa1182400-mRNA-1:exon:6537;Parent=Msa1182400-mRNA-1
chr8_1 exon 17522760 17522929 17522760 ID=Msa1182400-mRNA-1:exon:6538;Parent=Msa1182400-mRNA-1
chr8_1 exon 17523022 17523435 17523022 ID=Msa1182400-mRNA-1:exon:6539;Parent=Msa1182400-mRNA-1
chr8_1 exon 17523674 17524201 17523674 ID=Msa1182400-mRNA-1:exon:6540;Parent=Msa1182400-mRNA-1
chr8_1 five_prime_UTR 17518112 17518163 17518112 ID=Msa1182400-mRNA-1:five_prime_utr;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17518164 17518428 17518164 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17519877 17519989 17519877 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17520283 17520336 17520283 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17520486 17520570 17520486 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17520719 17520824 17520719 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17521099 17521212 17521099 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17521304 17521401 17521304 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17521502 17521611 17521502 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 CDS 17521770 17521835 17521770 ID=Msa1182400-mRNA-1:cds;Parent=Msa1182400-mRNA-1
chr8_1 three_prime_UTR 17521836 17522384 17521836 ID=Msa1182400-mRNA-1:three_prime_utr;Parent=Msa1182400-mRNA-1
chr8_1 three_prime_UTR 17522760 17522929 17522760 ID=Msa1182400-mRNA-1:three_prime_utr;Parent=Msa1182400-mRNA-1
chr8_1 three_prime_UTR 17523022 17523435 17523022 ID=Msa1182400-mRNA-1:three_prime_utr;Parent=Msa1182400-mRNA-1
chr8_1 three_prime_UTR 17523674 17524201 17523674 ID=Msa1182400-mRNA-1:three_prime_utr;Parent=Msa1182400-mRNA-1
Gene Sequence

>Msa1182400

ATGGCTTCTACTGTTTTCCTTCAGTTTCACTCTCTTTCTTCTTCTTCATCTTCTTCTAATCATCAACTCTTCCTCACCAAACTCCCTAATTACAACAATCCAATCTCCCAATCTTCTACTTCTAAACGTGCTTTCAATTATAAGCGCGTTTACTCAAAAGCTGTTTCCACTGACTCACAGAAACCTCTCATTGAGAACAACCAAAACATTCCCTCATCATCATCCTCCAAACTTGTCCTTGTTCTTGGTGGTTCAGGCGGTGTTGGGCAGCTAGTTGTAGCATCACTGCTTCAGCGGAATATTAAGTTGCGCTTGATACTTAGGGATCTTGAGAAAGCCAAGACACTGTTTGGTGAACAAGATGAAGAGAAACTGCAGGTATTCAAAGGAGACACAAGGAAGCATGATGATTTGGATCCATCCATGTTTGAGGGAGTCACTCATGTGATTTGCTGCACAGGAACAACAGCTTTTCCTTCAAGGCGGTGGGATGATGAAAATACACCAGAAAGAGTTGATTGGGTGGGAGTGAAGAATCTAGTATCTGTGTTGCCTTCCTCAGTGAAAAGAGTTATTCTTGTATCATCAATAGGTGTGACCAAGTGTAATGAATTGCCATGGAGACTTGTTAATCTTCATTTTTCACGTAGCATTATGAACCTATTTGGTGTCTTGAAGTACAAGAAGATGGGGGAGGAATTTCTTCAGAATTCTGGCTTTCCATATACTATAATTAGACCTGGAAGGTTGACAGATGGACCATACACGTCTTATGATCTCAATACATTACTCAAAGCAACAGCTGGGCAACGGCGAGCAGTGCTTATAGGTCAAGGAGATAAACTAGTGGGTGAAGCCAGTAGAATTGTGGTTGCTGAAGCTTGCGTACAGGCACTAGATCTAGAAGTCACTGAAAACCAAATATACGAAGTTAACTCTGTTGAGGGTGAAGGTCCTGGAAATGATGCTCAGAAGTGGCAAGAATTATTTGTGGCCGCGCGCTCTAGCTGA
Protein sequence

>Msa1182400

MASTVFLQFHSLSSSSSSSNHQLFLTKLPNYNNPISQSSTSKRAFNYKRVYSKAVSTDSQKPLIENNQNIPSSSSSKLVLVLGGSGGVGQLVVASLLQRNIKLRLILRDLEKAKTLFGEQDEEKLQVFKGDTRKHDDLDPSMFEGVTHVICCTGTTAFPSRRWDDENTPERVDWVGVKNLVSVLPSSVKRVILVSSIGVTKCNELPWRLVNLHFSRSIMNLFGVLKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACVQALDLEVTENQIYEVNSVEGEGPGNDAQKWQELFVAARSS*