AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1096550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096550 MtrunA17_Chr7g0221691 96.239 452 17 0 1 452 1 452 0.0 904
Msa1096550 MtrunA17_Chr7g0249421 67.164 335 101 6 84 409 51 385 3.72e-153 444
Msa1096550 MtrunA17_Chr8g0342431 52.736 402 129 5 42 410 1 374 2.42e-132 387
Msa1096550 MtrunA17_Chr4g0022171 53.892 334 146 4 86 418 54 380 5.37e-128 379
Msa1096550 MtrunA17_Chr2g0324061 48.441 417 198 8 42 452 1 406 1.19e-124 370
Msa1096550 MtrunA17_Chr7g0243571 52.199 341 153 4 84 422 46 378 5.46e-117 350
Msa1096550 MtrunA17_Chr4g0004971 50.774 323 141 5 89 409 38 344 2.79e-107 322
Msa1096550 MtrunA17_Chr7g0272061 48.923 325 153 3 88 410 50 363 5.61e-105 317
Msa1096550 MtrunA17_Chr4g0067711 48.589 319 144 5 93 410 55 354 4.35e-102 308
Msa1096550 MtrunA17_Chr1g0192421 46.914 324 152 3 88 410 48 352 2.66e-101 306
Msa1096550 MtrunA17_Chr2g0295401 48.276 319 141 5 95 410 58 355 8.57e-98 298
Msa1096550 MtrunA17_Chr1g0151781 46.226 318 147 5 93 408 33 328 4.88e-87 269
Msa1096550 MtrunA17_Chr4g0066371 31.987 297 140 7 111 387 68 322 6.25e-31 123
Msa1096550 MtrunA17_Chr6g0486661 25.680 331 180 6 111 419 106 392 4.61e-27 114
Msa1096550 MtrunA17_Chr5g0396731 32.117 274 125 9 106 371 80 300 2.60e-25 106
Msa1096550 MtrunA17_Chr2g0286951 30.100 299 146 8 111 389 69 324 3.36e-24 104
Msa1096550 MtrunA17_Chr6g0483411 33.163 196 96 6 232 411 145 321 4.43e-20 90.9
Msa1096550 MtrunA17_Chr2g0317021 37.306 193 79 9 204 384 154 316 4.67e-20 90.9
Msa1096550 MtrunA17_Chr4g0050381 37.778 180 92 9 208 384 98 260 4.33e-18 84.3
Msa1096550 MtrunA17_Chr2g0279151 38.674 181 89 10 208 384 102 264 8.08e-18 83.6
Msa1096550 MtrunA17_Chr1g0150451 30.522 249 136 9 150 384 82 307 9.61e-18 84.3
Msa1096550 MtrunA17_Chr5g0435721 30.303 264 140 8 106 369 200 419 1.31e-17 85.1
Msa1096550 MtrunA17_Chr8g0389921 40.146 137 66 4 232 368 266 386 1.50e-17 84.7
Msa1096550 MtrunA17_Chr3g0135961 30.097 309 143 14 71 368 238 484 2.79e-17 84.3
Msa1096550 MtrunA17_Chr1g0150781 30.242 248 120 10 127 368 288 488 4.33e-17 83.6
Msa1096550 MtrunA17_Chr3g0136711 30.350 257 117 11 131 384 67 264 1.02e-16 80.5
Msa1096550 MtrunA17_Chr3g0115851 39.444 180 89 9 208 384 103 265 2.14e-16 79.3
Msa1096550 MtrunA17_Chr8g0360351 36.364 165 71 7 232 386 126 266 2.69e-16 79.0
Msa1096550 MtrunA17_Chr4g0051661 34.637 179 98 7 211 387 223 384 5.50e-16 79.7
Msa1096550 MtrunA17_Chr1g0212961 27.799 259 122 10 129 385 126 321 5.80e-16 79.0
Msa1096550 MtrunA17_Chr3g0112291 28.679 265 145 8 106 369 100 321 9.85e-16 78.6
Msa1096550 MtrunA17_Chr5g0407161 30.901 233 119 9 168 386 126 330 1.06e-15 78.6
Msa1096550 MtrunA17_Chr4g0070871 30.417 240 120 9 129 368 253 445 1.35e-15 79.0
Msa1096550 MtrunA17_Chr7g0250061 30.180 222 102 9 226 411 149 353 4.73e-15 76.6
Msa1096550 MtrunA17_Chr3g0144111 31.429 175 88 6 201 368 40 189 5.40e-15 74.7
Msa1096550 MtrunA17_Chr3g0105371 29.520 271 144 13 134 397 86 316 1.09e-14 75.1
Msa1096550 MtrunA17_Chr2g0293811 30.603 232 129 8 167 386 105 316 1.20e-14 75.1
Msa1096550 MtrunA17_Chr8g0371321 32.093 215 104 8 242 420 157 365 1.24e-14 75.5
Msa1096550 MtrunA17_Chr3g0126511 28.333 240 110 8 131 368 127 306 1.28e-14 75.1
Msa1096550 MtrunA17_Chr7g0238501 26.688 311 166 11 100 386 238 510 4.05e-14 74.3
Msa1096550 MtrunA17_Chr7g0263281 32.903 155 86 5 245 382 152 305 7.52e-14 72.8
Msa1096550 MtrunA17_Chr1g0171571 29.808 208 123 8 168 369 420 610 8.44e-14 73.6
Msa1096550 MtrunA17_Chr1g0158781 27.778 288 145 10 84 369 104 330 8.79e-14 72.8
Msa1096550 MtrunA17_Chr2g0299981 28.814 236 142 7 129 364 267 476 9.66e-14 73.2
Msa1096550 MtrunA17_Chr5g0430481 27.675 271 133 11 100 368 125 334 9.81e-14 72.4
Msa1096550 MtrunA17_Chr3g0136811 32.903 155 78 4 223 369 151 287 1.62e-13 71.6
Msa1096550 MtrunA17_Chr1g0150071 35.256 156 73 7 223 369 151 287 3.18e-13 70.9
Msa1096550 MtrunA17_Chr1g0194191 27.711 249 122 10 127 369 116 312 3.98e-13 70.9
Msa1096550 MtrunA17_Chr4g0001761 32.903 155 78 4 223 369 151 287 7.00e-13 69.7
Msa1096550 MtrunA17_Chr2g0295991 26.599 297 172 11 122 386 158 440 7.26e-13 70.5
Msa1096550 MtrunA17_Chr4g0039061 26.019 319 176 11 88 386 168 446 1.19e-12 69.7
Msa1096550 MtrunA17_Chr1g0213351 31.515 165 85 4 244 386 160 318 1.89e-12 68.6
Msa1096550 MtrunA17_Chr3g0138281 34.483 145 71 5 231 369 182 308 1.89e-12 68.6
Msa1096550 MtrunA17_Chr4g0067301 28.426 197 103 5 219 386 264 451 2.33e-12 68.9
Msa1096550 MtrunA17_Chr7g0256751 32.727 165 80 8 245 386 151 307 1.64e-11 65.9
Msa1096550 MtrunA17_Chr1g0211251 32.051 156 86 6 245 382 162 315 2.02e-11 65.5
Msa1096550 MtrunA17_Chr1g0192471 28.302 265 158 11 139 388 36 283 2.91e-11 65.1
Msa1096550 MtrunA17_Chr4g0065141 26.482 253 117 8 125 368 120 312 3.39e-11 64.7
Msa1096550 MtrunA17_Chr7g0271971 27.692 260 157 10 143 388 41 283 8.88e-11 63.5
Msa1096550 MtrunA17_Chr1g0175381 29.193 161 91 5 245 386 160 316 9.95e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096550 AT3G02750.2 58.354 401 131 8 42 411 1 396 1.02e-147 430
Msa1096550 AT3G02750.1 58.354 401 131 8 42 411 1 396 1.02e-147 430
Msa1096550 AT1G16220.1 62.080 327 120 3 85 408 51 376 8.05e-144 420
Msa1096550 AT5G36250.1 57.065 368 139 4 84 437 53 415 1.90e-142 415
Msa1096550 AT1G79630.1 50.337 445 185 10 42 451 1 444 3.20e-142 417
Msa1096550 AT1G79630.8 51.395 430 178 9 52 451 12 440 7.81e-142 416
Msa1096550 AT3G02750.3 53.670 436 131 9 42 411 1 431 1.15e-139 411
Msa1096550 AT5G36250.2 54.974 382 139 5 84 437 53 429 2.54e-138 405
Msa1096550 AT1G79630.2 52.316 367 149 7 110 451 9 374 7.00e-125 370
Msa1096550 AT1G79630.7 52.316 367 149 7 110 451 9 374 7.00e-125 370
Msa1096550 AT1G03590.1 53.714 350 148 5 86 430 48 388 4.97e-121 361
Msa1096550 AT4G03415.1 51.149 348 161 5 86 432 55 394 7.37e-116 348
Msa1096550 AT4G03415.3 51.149 348 161 5 86 432 55 394 7.37e-116 348
Msa1096550 AT4G03415.2 51.149 348 161 5 86 432 55 394 7.37e-116 348
Msa1096550 AT5G36250.3 57.491 287 106 2 84 359 53 334 4.21e-113 337
Msa1096550 AT1G79630.6 51.198 334 137 7 143 451 2 334 1.08e-106 322
Msa1096550 AT1G79630.3 51.198 334 137 7 143 451 2 334 1.08e-106 322
Msa1096550 AT1G79630.4 51.198 334 137 7 143 451 2 334 1.08e-106 322
Msa1096550 AT1G79630.5 51.198 334 137 7 143 451 2 334 1.08e-106 322
Msa1096550 AT5G27930.1 48.182 330 140 4 85 407 48 353 6.81e-105 317
Msa1096550 AT5G27930.2 48.182 330 140 4 85 407 48 353 6.81e-105 317
Msa1096550 AT5G01700.2 52.366 317 129 4 94 409 43 338 2.46e-104 315
Msa1096550 AT5G01700.1 52.258 310 126 4 101 409 1 289 1.23e-102 309
Msa1096550 AT3G05640.2 48.113 318 140 4 93 409 57 350 1.82e-100 305
Msa1096550 AT3G05640.1 48.113 318 140 4 93 409 57 350 1.82e-100 305
Msa1096550 AT3G05640.3 48.113 318 140 4 93 409 57 350 1.82e-100 305
Msa1096550 AT3G16800.2 44.937 316 146 4 95 408 59 348 7.54e-86 267
Msa1096550 AT3G16800.1 44.937 316 146 4 95 408 59 348 7.54e-86 267
Msa1096550 AT3G16800.3 44.937 316 146 4 95 408 59 348 7.54e-86 267
Msa1096550 AT5G27930.3 46.763 278 118 3 85 356 48 301 1.75e-85 265
Msa1096550 AT4G32950.1 43.949 314 136 7 98 409 42 317 9.78e-76 240
Msa1096550 AT5G26010.1 42.453 318 150 5 98 413 43 329 4.04e-75 238
Msa1096550 AT3G16800.4 44.326 282 129 4 132 411 1 256 1.30e-72 229
Msa1096550 AT3G16800.6 44.326 282 129 4 132 411 1 256 1.30e-72 229
Msa1096550 AT4G32950.2 41.923 260 112 6 98 356 42 263 3.69e-56 187
Msa1096550 AT3G16800.5 41.176 187 83 3 95 280 59 219 1.70e-36 134
Msa1096550 AT2G20050.1 28.956 297 149 6 111 387 125 379 4.22e-28 118
Msa1096550 AT2G20050.2 28.956 297 149 6 111 387 125 379 4.88e-28 118
Msa1096550 AT3G06270.1 27.609 297 153 6 111 387 70 324 2.49e-23 100
Msa1096550 AT2G20630.1 37.615 218 107 12 184 396 80 273 1.90e-21 94.4
Msa1096550 AT2G20630.2 37.615 218 107 12 184 396 80 273 2.60e-21 94.4
Msa1096550 AT4G28400.3 38.172 186 90 9 204 386 82 245 3.89e-21 93.2
Msa1096550 AT4G28400.1 38.172 186 90 9 204 386 104 267 5.79e-21 93.2
Msa1096550 AT4G31750.1 28.313 332 177 14 123 429 16 311 8.59e-20 90.1
Msa1096550 AT4G31750.3 28.313 332 177 14 123 429 16 311 8.59e-20 90.1
Msa1096550 AT4G31750.2 30.072 276 151 10 123 384 16 263 1.31e-19 89.7
Msa1096550 AT1G72770.4 31.405 242 131 9 129 368 238 446 8.67e-19 89.4
Msa1096550 AT1G72770.1 31.405 242 131 9 129 368 238 446 8.67e-19 89.4
Msa1096550 AT1G72770.3 31.405 242 131 9 129 368 238 446 8.67e-19 89.4
Msa1096550 AT1G07430.1 41.259 143 68 4 227 369 228 354 3.74e-18 87.0
Msa1096550 AT3G11410.1 31.154 260 142 10 106 363 112 336 1.51e-17 84.7
Msa1096550 AT5G10740.1 32.735 223 119 9 168 384 66 263 2.39e-17 83.6
Msa1096550 AT5G10740.2 32.735 223 119 9 168 384 66 263 2.39e-17 83.6
Msa1096550 AT5G59220.1 30.000 270 137 10 106 369 119 342 6.57e-17 82.8
Msa1096550 AT3G15260.2 36.170 188 80 8 209 386 116 273 2.09e-16 79.7
Msa1096550 AT3G15260.1 36.170 188 80 8 209 386 116 273 2.09e-16 79.7
Msa1096550 AT5G53140.1 24.713 348 192 12 102 439 104 391 2.15e-16 81.3
Msa1096550 AT5G53140.2 24.713 348 192 12 102 439 104 391 2.15e-16 81.3
Msa1096550 AT5G24940.1 32.632 190 102 7 199 384 96 263 5.19e-16 80.5
Msa1096550 AT2G25620.1 29.433 282 122 12 106 369 97 319 6.78e-16 79.7
Msa1096550 AT2G25620.2 29.433 282 122 12 106 369 97 319 6.78e-16 79.7
Msa1096550 AT3G51470.2 30.332 211 110 7 168 369 64 246 4.01e-15 76.6
Msa1096550 AT1G07160.1 29.661 236 144 8 134 368 121 335 5.60e-15 76.6
Msa1096550 AT3G51470.1 30.332 211 110 7 168 369 108 290 7.15e-15 76.3
Msa1096550 AT2G34740.1 35.032 157 85 7 232 386 178 319 9.94e-15 75.5
Msa1096550 AT2G33700.1 34.706 170 83 6 204 368 160 306 1.06e-14 75.9
Msa1096550 AT3G62260.3 30.279 251 114 9 127 369 25 222 2.04e-14 73.9
Msa1096550 AT3G17250.1 28.346 254 124 10 129 374 158 361 2.40e-14 75.1
Msa1096550 AT3G62260.2 30.279 251 114 9 127 369 115 312 2.46e-14 74.7
Msa1096550 AT3G62260.1 30.279 251 114 9 127 369 114 311 2.63e-14 74.7
Msa1096550 AT5G51760.2 39.568 139 66 5 231 368 200 321 3.27e-14 74.3
Msa1096550 AT5G51760.1 39.568 139 66 5 231 368 230 351 4.08e-14 74.3
Msa1096550 AT1G22280.3 36.813 182 95 10 206 384 106 270 4.44e-14 73.2
Msa1096550 AT3G16560.3 27.723 303 156 12 122 386 167 444 4.48e-14 74.3
Msa1096550 AT1G22280.1 36.813 182 95 10 206 384 100 264 4.54e-14 72.8
Msa1096550 AT5G57050.1 29.167 240 122 7 129 368 160 351 4.95e-14 74.3
Msa1096550 AT1G43900.1 28.571 301 150 12 88 383 110 350 5.01e-14 73.9
Msa1096550 AT3G16560.1 27.723 303 156 12 122 386 167 444 5.09e-14 74.3
Msa1096550 AT3G16560.4 27.723 303 156 12 122 386 167 444 5.09e-14 74.3
Msa1096550 AT3G16560.2 27.723 303 156 12 122 386 167 444 5.09e-14 74.3
Msa1096550 AT2G30020.1 26.022 269 142 7 100 368 141 352 5.52e-14 73.9
Msa1096550 AT1G48040.1 33.673 196 97 6 205 387 161 336 5.79e-14 73.6
Msa1096550 AT5G57050.2 29.167 240 122 7 129 368 120 311 6.51e-14 73.6
Msa1096550 AT2G40180.1 27.941 272 139 10 100 369 130 346 1.67e-13 72.4
Msa1096550 AT1G78200.5 33.333 183 103 7 206 384 54 221 1.72e-13 70.5
Msa1096550 AT1G78200.4 33.333 183 103 7 206 384 54 221 1.72e-13 70.5
Msa1096550 AT1G78200.1 33.333 183 103 7 206 384 99 266 1.93e-13 70.9
Msa1096550 AT1G78200.3 33.333 183 103 7 206 384 99 266 1.93e-13 70.9
Msa1096550 AT1G78200.2 33.333 183 103 7 206 384 99 266 1.93e-13 70.9
Msa1096550 AT1G67820.2 26.966 267 135 9 104 369 90 297 1.98e-13 72.4
Msa1096550 AT1G18030.1 29.897 194 101 7 232 409 175 349 2.89e-13 71.2
Msa1096550 AT1G34750.2 34.615 182 99 9 206 384 101 265 3.22e-13 70.5
Msa1096550 AT1G34750.1 34.615 182 99 9 206 384 101 265 3.22e-13 70.5
Msa1096550 AT1G34750.3 34.615 182 99 9 206 384 101 265 3.22e-13 70.5
Msa1096550 AT1G67820.1 26.966 267 135 9 104 369 126 333 3.25e-13 71.6
Msa1096550 AT3G12620.2 31.250 208 108 10 236 411 156 360 3.94e-13 71.2
Msa1096550 AT3G12620.1 31.250 208 108 10 236 411 156 360 3.94e-13 71.2
Msa1096550 AT5G02760.1 36.184 152 77 6 245 379 153 301 5.36e-13 70.5
Msa1096550 AT2G29380.1 28.996 269 141 12 106 368 85 309 6.35e-13 70.5
Msa1096550 AT3G51370.2 29.648 199 106 7 245 411 75 271 8.66e-13 69.3
Msa1096550 AT5G66080.2 30.000 200 104 6 245 411 59 255 9.78e-13 68.9
Msa1096550 AT3G51370.1 29.648 199 106 7 245 411 160 356 1.26e-12 69.7
Msa1096550 AT3G51370.3 29.648 199 106 7 245 411 160 356 1.26e-12 69.7
Msa1096550 AT3G55050.1 32.544 169 93 7 236 386 157 322 1.40e-12 69.3
Msa1096550 AT3G55050.2 32.544 169 93 7 236 386 157 322 1.40e-12 69.3
Msa1096550 AT2G40860.2 30.000 190 111 5 204 385 458 633 1.68e-12 70.1
Msa1096550 AT2G40860.1 30.000 190 111 5 204 385 458 633 1.86e-12 69.7
Msa1096550 AT2G40860.4 30.000 190 111 5 204 385 360 535 1.96e-12 69.7
Msa1096550 AT5G66080.1 30.000 200 104 6 245 411 163 359 2.03e-12 68.9
Msa1096550 AT1G17550.1 29.661 236 136 9 129 364 237 442 2.83e-12 68.9
Msa1096550 AT1G17550.2 29.661 236 136 9 129 364 237 442 2.83e-12 68.9
Msa1096550 AT4G31860.1 30.323 155 82 4 223 369 151 287 5.82e-12 67.4
Msa1096550 AT4G31860.3 30.323 155 82 4 223 369 151 287 5.85e-12 66.6
Msa1096550 AT1G09160.2 34.756 164 86 8 231 386 131 281 1.02e-11 67.0
Msa1096550 AT1G09160.1 34.756 164 86 8 231 386 131 281 1.02e-11 67.0
Msa1096550 AT3G17090.1 26.396 197 114 6 245 411 166 361 1.81e-11 65.9
Msa1096550 AT5G06750.2 31.707 164 87 5 245 386 81 241 7.31e-11 63.5
Msa1096550 AT5G06750.3 31.707 164 87 6 245 386 163 323 8.15e-11 63.9
Msa1096550 AT5G06750.1 31.707 164 87 6 245 386 163 323 8.15e-11 63.9

Find 155 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATCTTAATGTCTAAAT+TGG 0.132930 7_3:+21122965 None:intergenic
CATTGTGCACTAAGCTTTAA+AGG 0.182238 7_3:+21125843 None:intergenic
TGGGAAGAGAAGGAGGTTAA+AGG 0.204772 7_3:-21126895 Msa1096550:CDS
CTGGCTATGGCACGGGCTTT+TGG 0.207991 7_3:-21124694 Msa1096550:CDS
TCAACTCTGTATTTGAATTA+AGG 0.217387 7_3:+21123476 None:intergenic
CTGAACATTGTGAGGGCTTT+GGG 0.245524 7_3:-21127005 Msa1096550:CDS
TTGAGTCAGCTGTTCTTTCT+TGG 0.253023 7_3:-21123552 Msa1096550:CDS
TTTGAAGGCTAGCAAGATTA+TGG 0.259201 7_3:-21125670 Msa1096550:CDS
AAAATTGGAGTTATTGGTTA+TGG 0.267026 7_3:-21122936 Msa1096550:three_prime_UTR
CTTCTCTGTATAGGTTGATT+TGG 0.283500 7_3:-21123091 Msa1096550:three_prime_UTR
TTCTTCTACCATGGATTATA+AGG 0.286247 7_3:-21126871 Msa1096550:CDS
GTATTGCAGGCAAGGTAAAA+AGG 0.288468 7_3:-21126802 Msa1096550:CDS
CCACATCTGGTTCATTCTTA+AGG 0.290859 7_3:+21124752 None:intergenic
ACCAAGATGCTATGCTTGTT+TGG 0.296521 7_3:-21126773 Msa1096550:CDS
TTTGATGGTCATGGACCTTA+TGG 0.316111 7_3:-21125900 Msa1096550:CDS
GTCTACTGCTGCTAGATTAC+TGG 0.321098 7_3:-21123575 Msa1096550:CDS
GCATTTGATGGGTGGGGTAT+TGG 0.330712 7_3:-21123188 Msa1096550:three_prime_UTR
TCTGAACATTGTGAGGGCTT+TGG 0.333102 7_3:-21127006 Msa1096550:CDS
GAATCGATATGGAACGGATT+TGG 0.339552 7_3:-21127081 Msa1096550:CDS
ATAAATAATGAAAAGAATAT+TGG 0.342514 7_3:+21123229 None:intergenic
ATAGGGTTGCAAAGAAAGTT+AGG 0.347280 7_3:-21125875 Msa1096550:CDS
TTTCCTTGGACAGCATTTGA+TGG 0.348769 7_3:-21123200 Msa1096550:three_prime_UTR
TACTTGGAAGATTAGGCTTA+AGG 0.350076 7_3:+21125380 None:intergenic
AAATCAAGGAATCGAAAATC+TGG 0.355931 7_3:+21127696 None:intergenic
CACATCTGGTTCATTCTTAA+GGG 0.356003 7_3:+21124753 None:intergenic
CGGATTTGGTTGGAGAAGGG+AGG 0.358073 7_3:-21127067 Msa1096550:CDS
CTACCTAGTGAGAATGGAAT+TGG 0.360090 7_3:-21123385 Msa1096550:CDS
CCAAGATGCTATGCTTGTTT+GGG 0.385024 7_3:-21126772 Msa1096550:CDS
GATGGAGTCAATGATCAAAA+TGG 0.388111 7_3:-21125798 Msa1096550:CDS
AATCTTGCTAGCCTTCAAAT+AGG 0.388665 7_3:+21125674 None:intergenic
AGATTGCTTCTATGTATTGC+AGG 0.393864 7_3:-21126815 Msa1096550:CDS
GTTAAAGGGTTCTTCTACCA+TGG 0.401337 7_3:-21126880 Msa1096550:CDS
TTGTCTTTGAAGTAGATAGT+AGG 0.402987 7_3:-21122744 Msa1096550:three_prime_UTR
AGAGATGATTGATCAACAAC+TGG 0.404278 7_3:+21123406 None:intergenic
ATGTATATACTTGGAAGATT+AGG 0.412084 7_3:+21125373 None:intergenic
AAATCAATCCAACATCCTTT+AGG 0.413241 7_3:+21124662 None:intergenic
TAGGGGCTGGACCTTGTCAT+TGG 0.415147 7_3:-21125481 Msa1096550:CDS
AAAAGGCTTGGGAAGAGATA+TGG 0.418296 7_3:+21123321 None:intergenic
TAACTCTGATTTCCCAGGTC+TGG 0.419673 7_3:-21124713 Msa1096550:CDS
AGCCAAACCCGAGCCACATC+TGG 0.420808 7_3:+21124739 None:intergenic
AGAATTAAATTGTGAAATCA+AGG 0.423532 7_3:+21127682 None:intergenic
ACAGAGGTTGGTGGTGGTGC+TGG 0.431168 7_3:-21126966 Msa1096550:CDS
CATTGTGAGGGCTTTGGGAA+TGG 0.436025 7_3:-21127000 Msa1096550:CDS
AACCAGATGTGGCTCGGGTT+TGG 0.437527 7_3:-21124741 Msa1096550:CDS
TTTGATGGGTGGGGTATTGG+AGG 0.438372 7_3:-21123185 Msa1096550:three_prime_UTR
ATTGTGAGGGCTTTGGGAAT+GGG 0.439573 7_3:-21126999 Msa1096550:CDS
CGATGGAGCAAATACTATCT+TGG 0.439772 7_3:-21125709 Msa1096550:CDS
ATTGTGCACTAAGCTTTAAA+GGG 0.440654 7_3:+21125844 None:intergenic
TTCCTTGGACAGCATTTGAT+GGG 0.441794 7_3:-21123199 Msa1096550:three_prime_UTR
TTTGCAACCCTATGGCCATA+AGG 0.445351 7_3:+21125885 None:intergenic
TTTAAAGCTTAGTGCACAAT+GGG 0.445439 7_3:-21125841 Msa1096550:CDS
AGAAGGGAGGGGATCAGATT+CGG 0.447482 7_3:-21127054 Msa1096550:CDS
ACTGGGTCTGTTGATGCATC+TGG 0.450576 7_3:+21123424 None:intergenic
TTGGACAGCATTTGATGGGT+GGG 0.453307 7_3:-21123195 Msa1096550:three_prime_UTR
CCCAGGTCTGGCTATGGCAC+GGG 0.454695 7_3:-21124701 Msa1096550:CDS
TAACTTTCTTTGCAACCCTA+TGG 0.454759 7_3:+21125877 None:intergenic
CCTGGGAGAATGTTCTTGAA+TGG 0.460019 7_3:-21126846 Msa1096550:CDS
CTTGGACAGCATTTGATGGG+TGG 0.461442 7_3:-21123196 Msa1096550:three_prime_UTR
GGGGATTCTAGAGCTGTATT+GGG 0.466077 7_3:-21125451 Msa1096550:CDS
TAAGAGAATCCTCGTGATCT+CGG 0.467300 7_3:+21125425 None:intergenic
GTTGCTTACCTGCTTGATCA+AGG 0.469706 7_3:+21125587 None:intergenic
ATCCGGAGGAAAAGGGGTAC+CGG 0.470995 7_3:-21123143 Msa1096550:three_prime_UTR
CCCAAACAAGCATAGCATCT+TGG 0.472982 7_3:+21126772 None:intergenic
TCAGATTCGGAGTGTTTAGC+TGG 0.473304 7_3:-21127041 Msa1096550:CDS
AGGCGGTGATATGAGACATC+TGG 0.474698 7_3:+21124634 None:intergenic
TACACATTATATAGTTTGTC+CGG 0.476947 7_3:-21123042 Msa1096550:three_prime_UTR
AGACCTGGGAAATCAGAGTT+AGG 0.478906 7_3:+21124715 None:intergenic
GGAACGGATTTGGTTGGAGA+AGG 0.480128 7_3:-21127071 Msa1096550:CDS
TCATCTCTACCTAGTGAGAA+TGG 0.480153 7_3:-21123391 Msa1096550:CDS
CAAATTCATCCTTCTCTGTA+AGG 0.481540 7_3:+21124614 None:intergenic
GGACCTTGTCATTGGAAATG+TGG 0.482196 7_3:-21125473 Msa1096550:CDS
GGGAAGAGAAGGAGGTTAAA+GGG 0.484227 7_3:-21126894 Msa1096550:CDS
TCGCAGGAATTGAACGTTGA+CGG 0.485879 7_3:-21126918 Msa1096550:CDS
CAATCATCAATCTTACAGTA+AGG 0.486586 7_3:+21123517 None:intergenic
CGAGTGGTTGCGTCAGCGGC+AGG 0.488457 7_3:+21127768 None:intergenic
CTGCCTAACTCTGATTTCCC+AGG 0.491210 7_3:-21124718 Msa1096550:CDS
GAACGGATTTGGTTGGAGAA+GGG 0.492334 7_3:-21127070 Msa1096550:CDS
CGATATGGAACGGATTTGGT+TGG 0.493543 7_3:-21127077 Msa1096550:CDS
CTGGGAGAATGTTCTTGAAT+GGG 0.494177 7_3:-21126845 Msa1096550:CDS
CGAAGAAGTTGTGGAGATTG+TGG 0.494222 7_3:-21123611 Msa1096550:CDS
GACCTTGTCATTGGAAATGT+GGG 0.496004 7_3:-21125472 Msa1096550:CDS
TGATTTCCCAGGTCTGGCTA+TGG 0.496031 7_3:-21124707 Msa1096550:CDS
GCCCGTGCCATAGCCAGACC+TGG 0.499142 7_3:+21124700 None:intergenic
TTGCATCGTAAGAATAAAGA+TGG 0.500267 7_3:-21125816 Msa1096550:CDS
ACTAAGAGAATCCTATTTGA+AGG 0.501057 7_3:-21125685 Msa1096550:CDS
TCCCAGGTCTGGCTATGGCA+CGG 0.506350 7_3:-21124702 Msa1096550:CDS
TGGACAGCATTTGATGGGTG+GGG 0.512967 7_3:-21123194 Msa1096550:three_prime_UTR
GAATGAACCAGATGTGGCTC+GGG 0.516219 7_3:-21124746 Msa1096550:CDS
AAGAGAATCCTCGTGATCTC+GGG 0.518359 7_3:+21125426 None:intergenic
CCCAGGTACCTTATAATCCA+TGG 0.518689 7_3:+21126863 None:intergenic
TTTATCAAACGAAGAAGTTG+TGG 0.520290 7_3:-21123620 Msa1096550:CDS
ACCATGGATTATAAGGTACC+TGG 0.524514 7_3:-21126864 Msa1096550:CDS
TCCGGAGGAAAAGGGGTACC+GGG 0.529297 7_3:-21123142 Msa1096550:three_prime_UTR
AGATGCTATGCTTGTTTGGG+AGG 0.530358 7_3:-21126769 Msa1096550:intron
TAGGGTTGCAAAGAAAGTTA+GGG 0.535573 7_3:-21125874 Msa1096550:CDS
GCTTCTATGTATTGCAGGCA+AGG 0.535775 7_3:-21126810 Msa1096550:CDS
CTCTTCAGAATTATAACTTG+TGG 0.536276 7_3:+21125770 None:intergenic
GTCACGAGTGGTTGCGTCAG+CGG 0.537877 7_3:+21127764 None:intergenic
GGATTTGGTTGGAGAAGGGA+GGG 0.538389 7_3:-21127066 Msa1096550:CDS
GCGTGAATCCAAAATCAAAT+CGG 0.539683 7_3:+21127613 None:intergenic
GTCTCTGCTAACTTATTCGC+AGG 0.543314 7_3:-21126934 Msa1096550:CDS
AGAATGAACCAGATGTGGCT+CGG 0.546848 7_3:-21124747 Msa1096550:CDS
TTGTTGTGTTAGCAACAGAT+GGG 0.547286 7_3:-21124594 Msa1096550:CDS
GAGGTTGGTGGTGGTGCTGG+TGG 0.548138 7_3:-21126963 Msa1096550:CDS
GAGAGGATCAGACATCGTAA+AGG 0.555695 7_3:-21124787 Msa1096550:CDS
GTCATGGACCTTATGGCCAT+AGG 0.558177 7_3:-21125893 Msa1096550:CDS
TCATGGACCTTATGGCCATA+GGG 0.559275 7_3:-21125892 Msa1096550:CDS
GGATCTTGTATAACAGAGGT+TGG 0.559776 7_3:-21126978 Msa1096550:CDS
CTGTATTTGAATTAAGGAAG+AGG 0.560437 7_3:+21123482 None:intergenic
TTTGTTGTGTTAGCAACAGA+TGG 0.562594 7_3:-21124595 Msa1096550:CDS
AGCAGTTACCTTGATCAAGC+AGG 0.564057 7_3:-21125595 Msa1096550:intron
CTTTAAAGCTTAGTGCACAA+TGG 0.567498 7_3:-21125842 Msa1096550:CDS
GGATCAGACATCGTAAAGGA+AGG 0.567716 7_3:-21124783 Msa1096550:CDS
ATATCACCGCCTTACAGAGA+AGG 0.568434 7_3:-21124623 Msa1096550:CDS
ACGTTGACGGTGGGAAGAGA+AGG 0.569685 7_3:-21126905 Msa1096550:CDS
AACAACAATCATCATGACTC+AGG 0.570815 7_3:-21127513 Msa1096550:intron
AACATTGATCATGAGCTCGA+TGG 0.572230 7_3:-21125726 Msa1096550:CDS
CAGGAATTGAACGTTGACGG+TGG 0.572937 7_3:-21126915 Msa1096550:CDS
GATTTGGTTGGAGAAGGGAG+GGG 0.573701 7_3:-21127065 Msa1096550:CDS
ACTCCAATTCCATTCTCACT+AGG 0.575682 7_3:+21123382 None:intergenic
GAATTGTTGTTGTGGTTGAG+AGG 0.576501 7_3:+21127725 None:intergenic
CCTTAAGAATGAACCAGATG+TGG 0.586414 7_3:-21124752 Msa1096550:CDS
CATGATTATTGTAATACCGT+GGG 0.593882 7_3:-21122838 Msa1096550:three_prime_UTR
CACCCATCAAATGCTGTCCA+AGG 0.594908 7_3:+21123197 None:intergenic
AATCATCAATCTTACAGTAA+GGG 0.595112 7_3:+21123518 None:intergenic
CAAATCAACCTATACAGAGA+AGG 0.595309 7_3:+21123092 None:intergenic
ATAATGTGTATCTAGAGACT+TGG 0.599911 7_3:+21123055 None:intergenic
GTGGTTGCGTCAGCGGCAGG+TGG 0.600444 7_3:+21127771 None:intergenic
GGAATGAAGAATTGTTGTTG+TGG 0.600646 7_3:+21127717 None:intergenic
TCATGATTATTGTAATACCG+TGG 0.603289 7_3:-21122839 Msa1096550:three_prime_UTR
ATCTGGTGTCAGCTTGTCTG+TGG 0.603547 7_3:+21123441 None:intergenic
CCATGGATTATAAGGTACCT+GGG 0.604671 7_3:-21126863 Msa1096550:CDS
ATGACAGTTCAGAAAATCAC+CGG 0.609103 7_3:+21123023 None:intergenic
TTCATTCATTTATATAGACA+CGG 0.611607 7_3:+21127875 None:intergenic
ATTTCACAGAGGAAGAAGAG+AGG 0.611881 7_3:-21124804 Msa1096550:intron
AGGAATTGAACGTTGACGGT+GGG 0.613550 7_3:-21126914 Msa1096550:CDS
TAGTGAGAATGGAATTGGAG+TGG 0.616716 7_3:-21123380 Msa1096550:CDS
GTTGTGGTTGAGAGGAGAAG+CGG 0.619127 7_3:+21127733 None:intergenic
CCTTGTCATTGGAAATGTGG+GGG 0.625699 7_3:-21125470 Msa1096550:CDS
GATCAGACATCGTAAAGGAA+GGG 0.640592 7_3:-21124782 Msa1096550:CDS
TGTTGTGTTAGCAACAGATG+GGG 0.643650 7_3:-21124593 Msa1096550:intron
CCCGTGCCATAGCCAGACCT+GGG 0.644006 7_3:+21124701 None:intergenic
TCTTGTATAACAGAGGTTGG+TGG 0.645707 7_3:-21126975 Msa1096550:CDS
CCATTCAAGAACATTCTCCC+AGG 0.646560 7_3:+21126846 None:intergenic
TGTATAACAGAGGTTGGTGG+TGG 0.648597 7_3:-21126972 Msa1096550:CDS
GCTGACGCAACCACTCGTGA+CGG 0.649417 7_3:-21127762 Msa1096550:five_prime_UTR
TTGACGGTGGGAAGAGAAGG+AGG 0.652215 7_3:-21126902 Msa1096550:CDS
ATTGGGAACCCGAGATCACG+AGG 0.666845 7_3:-21125434 Msa1096550:CDS
AATGGGATCTTGTATAACAG+AGG 0.673381 7_3:-21126982 Msa1096550:CDS
GAGATGATTGATCAACAACT+GGG 0.687400 7_3:+21123407 None:intergenic
ATTCATCCTTCTCTGTAAGG+CGG 0.688558 7_3:+21124617 None:intergenic
ACCTTGTCATTGGAAATGTG+GGG 0.692727 7_3:-21125471 Msa1096550:CDS
TAAGATTGATGATTGTGCTG+CGG 0.726918 7_3:-21123509 Msa1096550:CDS
AGATTGTGGCATCTGCACCG+CGG 0.775815 7_3:-21123597 Msa1096550:CDS
AATCTAGCAGCAGTAGACCG+CGG 0.778903 7_3:+21123580 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTCTTTTAACTAAAA+AGG + chr7_3:21126519-21126538 None:intergenic 10.0%
!!! TAAAAGAAATTTTTATTAGA+AGG - chr7_3:21126526-21126545 Msa1096550:intron 10.0%
!!! AAAAGAAATTTTTATTAGAA+GGG - chr7_3:21126527-21126546 Msa1096550:intron 10.0%
!! ATAAATAATGAAAAGAATAT+TGG + chr7_3:21127368-21127387 None:intergenic 10.0%
!!! TTTATATATATTATTTTGCG+TGG - chr7_3:21122766-21122785 Msa1096550:three_prime_UTR 15.0%
!! TAATATATGCTTAAAGATAA+TGG + chr7_3:21123857-21123876 None:intergenic 15.0%
!!! ATTATTTTTAAACTCGTATA+TGG + chr7_3:21125524-21125543 None:intergenic 15.0%
!! ATATACGAGTTTAAAAATAA+TGG - chr7_3:21125523-21125542 Msa1096550:intron 15.0%
!!! TGTTTAACTTTATTTACTTT+TGG - chr7_3:21125625-21125644 Msa1096550:CDS 15.0%
!!! ACAGTTTCTTTTAATTAAAA+GGG + chr7_3:21126348-21126367 None:intergenic 15.0%
!!! TACAGTTTCTTTTAATTAAA+AGG + chr7_3:21126349-21126368 None:intergenic 15.0%
!! AAAAATAATCAAATATTTCG+AGG + chr7_3:21126403-21126422 None:intergenic 15.0%
!! ATATACTAATACAGTATATT+TGG + chr7_3:21126671-21126690 None:intergenic 15.0%
!! AAATATACTGTATTAGTATA+TGG - chr7_3:21126670-21126689 Msa1096550:intron 15.0%
!! AATTCAAATATTTAATAGCA+CGG + chr7_3:21126912-21126931 None:intergenic 15.0%
!!! CTTTTTTTATTTAGAAGTTT+GGG - chr7_3:21127291-21127310 Msa1096550:intron 15.0%
!! AGAATTAAATTGTGAAATCA+AGG + chr7_3:21122915-21122934 None:intergenic 20.0%
!! TATAATTATGTTACTGTTGA+TGG - chr7_3:21123230-21123249 Msa1096550:three_prime_UTR 20.0%
!! AAAAGAGAAAACTACAAAAA+TGG + chr7_3:21124272-21124291 None:intergenic 20.0%
!! ACAAGAGTTAAATTAAATGA+GGG + chr7_3:21124595-21124614 None:intergenic 20.0%
!! AACAAGAGTTAAATTAAATG+AGG + chr7_3:21124596-21124615 None:intergenic 20.0%
!! TAATTATTTGCTCAAAACTA+AGG - chr7_3:21124615-21124634 Msa1096550:CDS 20.0%
!! AACATAGTGTAAAACAAATA+AGG + chr7_3:21125074-21125093 None:intergenic 20.0%
!! TTACATTTGATAAGTTATGT+TGG - chr7_3:21125497-21125516 Msa1096550:intron 20.0%
!! AATGTATTAAATAGTTGTGT+TGG - chr7_3:21125576-21125595 Msa1096550:intron 20.0%
!!! TTTTAATAAATGCTGTAACT+TGG - chr7_3:21125697-21125716 Msa1096550:CDS 20.0%
!! TATGTAGAAATAACCAAATA+TGG - chr7_3:21126093-21126112 Msa1096550:intron 20.0%
!!! TGATTATTTTCTCACATAAT+TGG - chr7_3:21126240-21126259 Msa1096550:intron 20.0%
!! TAATACAGTATATTTGGTTA+AGG + chr7_3:21126665-21126684 None:intergenic 20.0%
!!! ATTGTAAAGTCTTTTTTTGT+GGG - chr7_3:21126731-21126750 Msa1096550:intron 20.0%
!! TGTGAATAATTAGATATAGA+GGG - chr7_3:21126812-21126831 Msa1096550:CDS 20.0%
!! TTCTAAATAAAAAAAGGCTT+GGG + chr7_3:21127287-21127306 None:intergenic 20.0%
!! CCAAACTTCTAAATAAAAAA+AGG + chr7_3:21127293-21127312 None:intergenic 20.0%
!!! CCTTTTTTTATTTAGAAGTT+TGG - chr7_3:21127290-21127309 Msa1096550:intron 20.0%
!!! TTATTTATCTTTCTTTTCCT+TGG - chr7_3:21127380-21127399 Msa1096550:intron 20.0%
!! TTCTATCTTAATGTCTAAAT+TGG + chr7_3:21127632-21127651 None:intergenic 20.0%
! TCTACAAAAAAAAAAAACGC+TGG - chr7_3:21122932-21122951 Msa1096550:three_prime_UTR 25.0%
! CAAAATCAAATCGGAAAAAA+AGG + chr7_3:21122975-21122994 None:intergenic 25.0%
!!! CTTTTTTTCCGATTTGATTT+TGG - chr7_3:21122973-21122992 Msa1096550:three_prime_UTR 25.0%
! GTTTGGATAACTAACAATTA+TGG - chr7_3:21124011-21124030 Msa1096550:intron 25.0%
! AAAGTTTATTTCGACTTACA+TGG + chr7_3:21124236-21124255 None:intergenic 25.0%
!! TAAAAGTGTACACATATTCA+TGG + chr7_3:21124302-21124321 None:intergenic 25.0%
!!! GTGTACACTTTTATTTTATC+TGG - chr7_3:21124309-21124328 Msa1096550:intron 25.0%
! CTAGAATATAAACCACAAAT+AGG + chr7_3:21124348-21124367 None:intergenic 25.0%
!!! TGAAAAATGTCGATTCTTTT+TGG - chr7_3:21124427-21124446 Msa1096550:intron 25.0%
!!! TCTTTTTGGCTTTTGAATTT+AGG - chr7_3:21124441-21124460 Msa1096550:intron 25.0%
!!! CTTTTTGGCTTTTGAATTTA+GGG - chr7_3:21124442-21124461 Msa1096550:intron 25.0%
!! CTTTTGCTTATAAATCATTC+TGG + chr7_3:21124493-21124512 None:intergenic 25.0%
! ATATTTCATTCCAAGATAGA+TGG + chr7_3:21124520-21124539 None:intergenic 25.0%
! TAGAGATAGTAGCAATAAAA+AGG + chr7_3:21124566-21124585 None:intergenic 25.0%
! CAAGAGTTAAATTAAATGAG+GGG + chr7_3:21124594-21124613 None:intergenic 25.0%
! AAAGTTCTGTATACACAAAA+TGG + chr7_3:21124641-21124660 None:intergenic 25.0%
!! TATACAGAACTTTTGTTCAA+AGG - chr7_3:21124648-21124667 Msa1096550:CDS 25.0%
! ATCAAAAACACCACAAAAAA+CGG + chr7_3:21124680-21124699 None:intergenic 25.0%
! ATGTATATACTTGGAAGATT+AGG + chr7_3:21125224-21125243 None:intergenic 25.0%
! TCTTGCAATATATAGATAGA+TGG + chr7_3:21125416-21125435 None:intergenic 25.0%
! ACTTATGACTTATCATTCAT+AGG - chr7_3:21125546-21125565 Msa1096550:intron 25.0%
! AATCAAGTTTGAACCATATT+TGG + chr7_3:21126109-21126128 None:intergenic 25.0%
! AAATATGGTTCAAACTTGAT+TGG - chr7_3:21126108-21126127 Msa1096550:intron 25.0%
! TAATATTCCACAATCAAGTT+AGG + chr7_3:21126281-21126300 None:intergenic 25.0%
! TATTACAATTTACTGAACCT+TGG - chr7_3:21126564-21126583 Msa1096550:intron 25.0%
! CACAAAAAAAGACTTTACAA+TGG + chr7_3:21126732-21126751 None:intergenic 25.0%
!!! CATTGTAAAGTCTTTTTTTG+TGG - chr7_3:21126730-21126749 Msa1096550:intron 25.0%
!!! TTGTAAAGTCTTTTTTTGTG+GGG - chr7_3:21126732-21126751 Msa1096550:intron 25.0%
! TGTGTAAAAAGAAAACTCTT+AGG - chr7_3:21126759-21126778 Msa1096550:intron 25.0%
! GTGTAAAAAGAAAACTCTTA+GGG - chr7_3:21126760-21126779 Msa1096550:intron 25.0%
! TGTAAAAAGAAAACTCTTAG+GGG - chr7_3:21126761-21126780 Msa1096550:intron 25.0%
! GTGTGAATAATTAGATATAG+AGG - chr7_3:21126811-21126830 Msa1096550:CDS 25.0%
! AATTGTTCTATGTTTGCAAT+TGG + chr7_3:21126841-21126860 None:intergenic 25.0%
! AATCATCAATCTTACAGTAA+GGG + chr7_3:21127079-21127098 None:intergenic 25.0%
! TCAACTCTGTATTTGAATTA+AGG + chr7_3:21127121-21127140 None:intergenic 25.0%
! CTTCTAAATAAAAAAAGGCT+TGG + chr7_3:21127288-21127307 None:intergenic 25.0%
!! TTCAATATATGTTTTGCATC+CGG - chr7_3:21127434-21127453 Msa1096550:intron 25.0%
!! TACACATTATATAGTTTGTC+CGG - chr7_3:21127552-21127571 Msa1096550:five_prime_UTR 25.0%
! AAGATAGAACTTGCAAAAAT+TGG - chr7_3:21127643-21127662 Msa1096550:five_prime_UTR 25.0%
!! AAAATTGGAGTTATTGGTTA+TGG - chr7_3:21127658-21127677 Msa1096550:five_prime_UTR 25.0%
AAATCAAGGAATCGAAAATC+TGG + chr7_3:21122901-21122920 None:intergenic 30.0%
GAGACAGACAAACAAAAATT+TGG + chr7_3:21123423-21123442 None:intergenic 30.0%
! ATGATGATGATGATTGTATC+AGG - chr7_3:21123477-21123496 Msa1096550:CDS 30.0%
!!! AGTTTTGAATCGATATGGAA+CGG - chr7_3:21123507-21123526 Msa1096550:CDS 30.0%
! AATGTTTTCTGAACATTGTG+AGG - chr7_3:21123581-21123600 Msa1096550:CDS 30.0%
! ATGTTTTCTGAACATTGTGA+GGG - chr7_3:21123582-21123601 Msa1096550:CDS 30.0%
! TTCTTCTACCATGGATTATA+AGG - chr7_3:21123723-21123742 Msa1096550:intron 30.0%
! ACATGGTTAGTTGGAAAAAT+TGG + chr7_3:21123971-21123990 None:intergenic 30.0%
! ATTTTTCCAACTAACCATGT+TGG - chr7_3:21123971-21123990 Msa1096550:intron 30.0%
TCTATGTCTATGAGTAAGTT+TGG - chr7_3:21123994-21124013 Msa1096550:intron 30.0%
!!! TGCCTTGTTTTTTCCTAAAA+TGG - chr7_3:21124132-21124151 Msa1096550:intron 30.0%
!!! GCCTTGTTTTTTCCTAAAAT+GGG - chr7_3:21124133-21124152 Msa1096550:intron 30.0%
!! ACCCATTTTAGGAAAAAACA+AGG + chr7_3:21124137-21124156 None:intergenic 30.0%
! ATCCAAATTTTGCCTATTTG+TGG - chr7_3:21124333-21124352 Msa1096550:intron 30.0%
AACCACAAATAGGCAAAATT+TGG + chr7_3:21124338-21124357 None:intergenic 30.0%
! AAGCGAAAGTGAAAACTTTT+TGG - chr7_3:21124540-21124559 Msa1096550:intron 30.0%
!!! GTTTTTTGTGGTGTTTTTGA+TGG - chr7_3:21124679-21124698 Msa1096550:CDS 30.0%
!! ATTGTGCACTAAGCTTTAAA+GGG + chr7_3:21124753-21124772 None:intergenic 30.0%
! TTTAAAGCTTAGTGCACAAT+GGG - chr7_3:21124753-21124772 Msa1096550:CDS 30.0%
TTGCATCGTAAGAATAAAGA+TGG - chr7_3:21124778-21124797 Msa1096550:CDS 30.0%
CTCTTCAGAATTATAACTTG+TGG + chr7_3:21124827-21124846 None:intergenic 30.0%
ACTAAGAGAATCCTATTTGA+AGG - chr7_3:21124909-21124928 Msa1096550:intron 30.0%
!! ATATTGATTGCTTTTGCAGT+GGG - chr7_3:21124971-21124990 Msa1096550:intron 30.0%
! TCTACTCCTTATGTTCTTTT+AGG - chr7_3:21125094-21125113 Msa1096550:intron 30.0%
! CTACTCCTTATGTTCTTTTA+GGG - chr7_3:21125095-21125114 Msa1096550:intron 30.0%
! TACTCCTTATGTTCTTTTAG+GGG - chr7_3:21125096-21125115 Msa1096550:intron 30.0%
TTTCCATACTTCAATCAGAT+TGG - chr7_3:21125726-21125745 Msa1096550:CDS 30.0%
! ATTTGCACTTTATTTCACAG+AGG - chr7_3:21125779-21125798 Msa1096550:CDS 30.0%
!! TTTTGGAGATTTTTGCCTAA+AGG - chr7_3:21125917-21125936 Msa1096550:CDS 30.0%
AAATCAATCCAACATCCTTT+AGG + chr7_3:21125935-21125954 None:intergenic 30.0%
!! GGTTATTTCTACATACTAGA+AGG + chr7_3:21126088-21126107 None:intergenic 30.0%
!!! TGTTTTGATTAAACAGCAAG+GGG + chr7_3:21126145-21126164 None:intergenic 30.0%
!!! GTGTTTTGATTAAACAGCAA+GGG + chr7_3:21126146-21126165 None:intergenic 30.0%
!!! AGTGTTTTGATTAAACAGCA+AGG + chr7_3:21126147-21126166 None:intergenic 30.0%
TAATATCTCATACCCAAGTT+AGG + chr7_3:21126452-21126471 None:intergenic 30.0%
!!! TGTAAAGTCTTTTTTTGTGG+GGG - chr7_3:21126733-21126752 Msa1096550:intron 30.0%
TTTATCAAACGAAGAAGTTG+TGG - chr7_3:21126974-21126993 Msa1096550:CDS 30.0%
CAATCATCAATCTTACAGTA+AGG + chr7_3:21127080-21127099 None:intergenic 30.0%
CTGTATTTGAATTAAGGAAG+AGG + chr7_3:21127115-21127134 None:intergenic 30.0%
!!! GTCAAAGAGAGACATTTTTT+TGG - chr7_3:21127331-21127350 Msa1096550:intron 30.0%
ATAATGTGTATCTAGAGACT+TGG + chr7_3:21127542-21127561 None:intergenic 30.0%
CTTGCAAAAATTGGAGTTAT+TGG - chr7_3:21127652-21127671 Msa1096550:five_prime_UTR 30.0%
TCATGATTATTGTAATACCG+TGG - chr7_3:21127755-21127774 Msa1096550:five_prime_UTR 30.0%
CATGATTATTGTAATACCGT+GGG - chr7_3:21127756-21127775 Msa1096550:five_prime_UTR 30.0%
AGAAAAAATAGTGATTCCCA+CGG + chr7_3:21127775-21127794 None:intergenic 30.0%
!! TTGTCTTTGAAGTAGATAGT+AGG - chr7_3:21127850-21127869 Msa1096550:five_prime_UTR 30.0%
! GGAATGAAGAATTGTTGTTG+TGG + chr7_3:21122880-21122899 None:intergenic 35.0%
GCGTGAATCCAAAATCAAAT+CGG + chr7_3:21122984-21123003 None:intergenic 35.0%
AACAACAATCATCATGACTC+AGG - chr7_3:21123081-21123100 Msa1096550:three_prime_UTR 35.0%
! GTCTGTTTTGTATCAGACAA+CGG + chr7_3:21123367-21123386 None:intergenic 35.0%
!!! GTGGAAGTTTTGAATCGATA+TGG - chr7_3:21123502-21123521 Msa1096550:CDS 35.0%
AATGGGATCTTGTATAACAG+AGG - chr7_3:21123612-21123631 Msa1096550:CDS 35.0%
AGATTGCTTCTATGTATTGC+AGG - chr7_3:21123779-21123798 Msa1096550:intron 35.0%
TATTGCAGGCAAGGTAAAAA+GGG - chr7_3:21123793-21123812 Msa1096550:intron 35.0%
! GGGGCTTAAATGATTTTGTT+TGG - chr7_3:21124183-21124202 Msa1096550:intron 35.0%
CAAAAGTTGTCCATCTATCT+TGG - chr7_3:21124507-21124526 Msa1096550:intron 35.0%
! ACAGAACTTTTGTTCAAAGG+AGG - chr7_3:21124651-21124670 Msa1096550:CDS 35.0%
! CAGAACTTTTGTTCAAAGGA+GGG - chr7_3:21124652-21124671 Msa1096550:CDS 35.0%
TAACTTTCTTTGCAACCCTA+TGG + chr7_3:21124720-21124739 None:intergenic 35.0%
ATAGGGTTGCAAAGAAAGTT+AGG - chr7_3:21124719-21124738 Msa1096550:CDS 35.0%
TAGGGTTGCAAAGAAAGTTA+GGG - chr7_3:21124720-21124739 Msa1096550:CDS 35.0%
! CATTGTGCACTAAGCTTTAA+AGG + chr7_3:21124754-21124773 None:intergenic 35.0%
!! CTTTAAAGCTTAGTGCACAA+TGG - chr7_3:21124752-21124771 Msa1096550:CDS 35.0%
GATGGAGTCAATGATCAAAA+TGG - chr7_3:21124796-21124815 Msa1096550:CDS 35.0%
!! AATCTTGCTAGCCTTCAAAT+AGG + chr7_3:21124923-21124942 None:intergenic 35.0%
TTTGAAGGCTAGCAAGATTA+TGG - chr7_3:21124924-21124943 Msa1096550:intron 35.0%
!! GATATTGATTGCTTTTGCAG+TGG - chr7_3:21124970-21124989 Msa1096550:intron 35.0%
TACTTGGAAGATTAGGCTTA+AGG + chr7_3:21125217-21125236 None:intergenic 35.0%
GAGAGAGAGATGTATATACT+TGG + chr7_3:21125233-21125252 None:intergenic 35.0%
AAAGACACAAAGACTGAGAA+GGG + chr7_3:21125360-21125379 None:intergenic 35.0%
TAAAGACACAAAGACTGAGA+AGG + chr7_3:21125361-21125380 None:intergenic 35.0%
AAGTTACACAGAATACTGCT+TGG + chr7_3:21125457-21125476 None:intergenic 35.0%
AAATAGTTGTGTTGGAGCAA+TGG - chr7_3:21125584-21125603 Msa1096550:intron 35.0%
! CACATCTGGTTCATTCTTAA+GGG + chr7_3:21125844-21125863 None:intergenic 35.0%
! GATTTTTGCCTAAAGGATGT+TGG - chr7_3:21125924-21125943 Msa1096550:CDS 35.0%
CAAATTCATCCTTCTCTGTA+AGG + chr7_3:21125983-21126002 None:intergenic 35.0%
! TTTGTTGTGTTAGCAACAGA+TGG - chr7_3:21125999-21126018 Msa1096550:intron 35.0%
TTGTTGTGTTAGCAACAGAT+GGG - chr7_3:21126000-21126019 Msa1096550:intron 35.0%
!!! GCACTCTACAGTTTTGTTAT+AGG - chr7_3:21126205-21126224 Msa1096550:intron 35.0%
TTCTACACCTAACTTGATTG+TGG - chr7_3:21126271-21126290 Msa1096550:intron 35.0%
ATTTCGAGGCATATAGCAAA+GGG + chr7_3:21126389-21126408 None:intergenic 35.0%
TATTTCGAGGCATATAGCAA+AGG + chr7_3:21126390-21126409 None:intergenic 35.0%
TTCACTTTCTACACCTAACT+TGG - chr7_3:21126436-21126455 Msa1096550:intron 35.0%
TCACTTTCTACACCTAACTT+GGG - chr7_3:21126437-21126456 Msa1096550:intron 35.0%
TACTGAACCTTGGAAAAAGT+TGG - chr7_3:21126574-21126593 Msa1096550:intron 35.0%
!! GTTTCAACCAACTTTTTCCA+AGG + chr7_3:21126584-21126603 None:intergenic 35.0%
GGTAACAATGCTAGATCAAA+TGG - chr7_3:21126782-21126801 Msa1096550:CDS 35.0%
ATGCTAGATCAAATGGATGA+TGG - chr7_3:21126789-21126808 Msa1096550:CDS 35.0%
TAAAACATCCCAAATCTGCA+CGG + chr7_3:21126958-21126977 None:intergenic 35.0%
! TAAGATTGATGATTGTGCTG+CGG - chr7_3:21127085-21127104 Msa1096550:CDS 35.0%
GAGATGATTGATCAACAACT+GGG + chr7_3:21127190-21127209 None:intergenic 35.0%
AGAGATGATTGATCAACAAC+TGG + chr7_3:21127191-21127210 None:intergenic 35.0%
! ATGCTATCACAGCAGTTTTT+CGG + chr7_3:21127243-21127262 None:intergenic 35.0%
! AATATATGTTTTGCATCCGG+AGG - chr7_3:21127437-21127456 Msa1096550:intron 35.0%
TCTAGCACTAAAAATAAGCC+CGG + chr7_3:21127473-21127492 None:intergenic 35.0%
!! GTCATTTTCCTTCTCTGTAT+AGG - chr7_3:21127494-21127513 Msa1096550:intron 35.0%
CAAATCAACCTATACAGAGA+AGG + chr7_3:21127505-21127524 None:intergenic 35.0%
!! CTTCTCTGTATAGGTTGATT+TGG - chr7_3:21127503-21127522 Msa1096550:intron 35.0%
ATGACAGTTCAGAAAATCAC+CGG + chr7_3:21127574-21127593 None:intergenic 35.0%
!! TGGTTATGGATTTTTCAGTC+AGG - chr7_3:21127672-21127691 Msa1096550:five_prime_UTR 35.0%
!!! TTTGCGTTTTGATTTACTGC+AGG - chr7_3:21127823-21127842 Msa1096550:five_prime_UTR 35.0%
! GAATTGTTGTTGTGGTTGAG+AGG + chr7_3:21122872-21122891 None:intergenic 40.0%
! AAAAAGCGCGTGAATTGAAG+AGG + chr7_3:21123012-21123031 None:intergenic 40.0%
TGAAACACTAACACAGACAC+AGG + chr7_3:21123445-21123464 None:intergenic 40.0%
ATGATGATTGTATCAGGCTG+TGG - chr7_3:21123483-21123502 Msa1096550:CDS 40.0%
! GAATCGATATGGAACGGATT+TGG - chr7_3:21123513-21123532 Msa1096550:CDS 40.0%
GGATCTTGTATAACAGAGGT+TGG - chr7_3:21123616-21123635 Msa1096550:CDS 40.0%
TCTTGTATAACAGAGGTTGG+TGG - chr7_3:21123619-21123638 Msa1096550:CDS 40.0%
GTTAAAGGGTTCTTCTACCA+TGG - chr7_3:21123714-21123733 Msa1096550:intron 40.0%
! ACCATGGATTATAAGGTACC+TGG - chr7_3:21123730-21123749 Msa1096550:intron 40.0%
! CCATGGATTATAAGGTACCT+GGG - chr7_3:21123731-21123750 Msa1096550:intron 40.0%
CTGGGAGAATGTTCTTGAAT+GGG - chr7_3:21123749-21123768 Msa1096550:intron 40.0%
GTATTGCAGGCAAGGTAAAA+AGG - chr7_3:21123792-21123811 Msa1096550:intron 40.0%
ACCAAGATGCTATGCTTGTT+TGG - chr7_3:21123821-21123840 Msa1096550:intron 40.0%
CCAAGATGCTATGCTTGTTT+GGG - chr7_3:21123822-21123841 Msa1096550:intron 40.0%
CATAGACCAACATGGTTAGT+TGG + chr7_3:21123980-21123999 None:intergenic 40.0%
CTCATAGACATAGACCAACA+TGG + chr7_3:21123988-21124007 None:intergenic 40.0%
! TTTCCGTGTTTTTCCCAAGA+TGG - chr7_3:21124074-21124093 Msa1096550:intron 40.0%
! TTCCGTGTTTTTCCCAAGAT+GGG - chr7_3:21124075-21124094 Msa1096550:intron 40.0%
AACCCATCTTGGGAAAAACA+CGG + chr7_3:21124080-21124099 None:intergenic 40.0%
! TCCTAAAATGGGTTTGTGAC+TGG - chr7_3:21124144-21124163 Msa1096550:intron 40.0%
!!! ACTGGCTTTGGTTGTACTTT+TGG - chr7_3:21124162-21124181 Msa1096550:intron 40.0%
!!! CTGGCTTTGGTTGTACTTTT+GGG - chr7_3:21124163-21124182 Msa1096550:intron 40.0%
!!! TGGCTTTGGTTGTACTTTTG+GGG - chr7_3:21124164-21124183 Msa1096550:intron 40.0%
!! TGTGGTGTTTTTGATGGTCA+TGG - chr7_3:21124685-21124704 Msa1096550:CDS 40.0%
! TTTGATGGTCATGGACCTTA+TGG - chr7_3:21124694-21124713 Msa1096550:CDS 40.0%
AACATTGATCATGAGCTCGA+TGG - chr7_3:21124868-21124887 Msa1096550:intron 40.0%
CGATGGAGCAAATACTATCT+TGG - chr7_3:21124885-21124904 Msa1096550:intron 40.0%
GACCTTGTCATTGGAAATGT+GGG - chr7_3:21125122-21125141 Msa1096550:intron 40.0%
ACCTTGTCATTGGAAATGTG+GGG - chr7_3:21125123-21125142 Msa1096550:intron 40.0%
TAAGAGAATCCTCGTGATCT+CGG + chr7_3:21125172-21125191 None:intergenic 40.0%
AAGACACAAAGACTGAGAAG+GGG + chr7_3:21125359-21125378 None:intergenic 40.0%
! TTGTGTTGGAGCAATGGATT+GGG - chr7_3:21125590-21125609 Msa1096550:intron 40.0%
! CTTTTGGCAGAACGCTTAAT+TGG - chr7_3:21125641-21125660 Msa1096550:CDS 40.0%
GTGCCAATCTGATTGAAGTA+TGG + chr7_3:21125732-21125751 None:intergenic 40.0%
ATTTCACAGAGGAAGAAGAG+AGG - chr7_3:21125790-21125809 Msa1096550:CDS 40.0%
GATCAGACATCGTAAAGGAA+GGG - chr7_3:21125812-21125831 Msa1096550:CDS 40.0%
! CCACATCTGGTTCATTCTTA+AGG + chr7_3:21125845-21125864 None:intergenic 40.0%
CCTTAAGAATGAACCAGATG+TGG - chr7_3:21125842-21125861 Msa1096550:CDS 40.0%
ATTCATCCTTCTCTGTAAGG+CGG + chr7_3:21125980-21125999 None:intergenic 40.0%
TGTTGTGTTAGCAACAGATG+GGG - chr7_3:21126001-21126020 Msa1096550:intron 40.0%
CTGCTGAGACATACTCAATT+AGG - chr7_3:21126305-21126324 Msa1096550:intron 40.0%
CTGAGACATACTCAATTAGG+TGG - chr7_3:21126308-21126327 Msa1096550:intron 40.0%
TTTCGAGGCATATAGCAAAG+GGG + chr7_3:21126388-21126407 None:intergenic 40.0%
CTGTTGAGACATGCTTGATT+GGG - chr7_3:21126476-21126495 Msa1096550:intron 40.0%
CAAAATGCCAGAACTTTCAG+GGG + chr7_3:21126642-21126661 None:intergenic 40.0%
GCAAAATGCCAGAACTTTCA+GGG + chr7_3:21126643-21126662 None:intergenic 40.0%
ATATGGTAGCTCCTTGCAAT+CGG - chr7_3:21126687-21126706 Msa1096550:intron 40.0%
TAACTTTCTCTCCGATTGCA+AGG + chr7_3:21126701-21126720 None:intergenic 40.0%
TTGCAATCGGAGAGAAAGTT+AGG - chr7_3:21126700-21126719 Msa1096550:intron 40.0%
ATGATTCTTCCGTGCAGATT+TGG - chr7_3:21126946-21126965 Msa1096550:CDS 40.0%
TGATTCTTCCGTGCAGATTT+GGG - chr7_3:21126947-21126966 Msa1096550:CDS 40.0%
TTGAGTCAGCTGTTCTTTCT+TGG - chr7_3:21127042-21127061 Msa1096550:CDS 40.0%
TCATCTCTACCTAGTGAGAA+TGG - chr7_3:21127203-21127222 Msa1096550:intron 40.0%
CTACCTAGTGAGAATGGAAT+TGG - chr7_3:21127209-21127228 Msa1096550:intron 40.0%
ACTCCAATTCCATTCTCACT+AGG + chr7_3:21127215-21127234 None:intergenic 40.0%
TAGTGAGAATGGAATTGGAG+TGG - chr7_3:21127214-21127233 Msa1096550:intron 40.0%
AAAAGGCTTGGGAAGAGATA+TGG + chr7_3:21127276-21127295 None:intergenic 40.0%
TTTCCTTGGACAGCATTTGA+TGG - chr7_3:21127394-21127413 Msa1096550:intron 40.0%
TTCCTTGGACAGCATTTGAT+GGG - chr7_3:21127395-21127414 Msa1096550:intron 40.0%
!!! GGGCTTATTTTTAGTGCTAG+AGG - chr7_3:21127472-21127491 Msa1096550:intron 40.0%
!!! TTCACGCGCTTTTTGAGTCA+AGG - chr7_3:21123018-21123037 Msa1096550:three_prime_UTR 45.0%
ACACCGACAATTCTGATCGA+AGG - chr7_3:21123336-21123355 Msa1096550:three_prime_UTR 45.0%
ACGCCTTCGATCAGAATTGT+CGG + chr7_3:21123342-21123361 None:intergenic 45.0%
! CGATATGGAACGGATTTGGT+TGG - chr7_3:21123517-21123536 Msa1096550:CDS 45.0%
! GAACGGATTTGGTTGGAGAA+GGG - chr7_3:21123524-21123543 Msa1096550:CDS 45.0%
! TCAGATTCGGAGTGTTTAGC+TGG - chr7_3:21123553-21123572 Msa1096550:CDS 45.0%
TCTGAACATTGTGAGGGCTT+TGG - chr7_3:21123588-21123607 Msa1096550:CDS 45.0%
CTGAACATTGTGAGGGCTTT+GGG - chr7_3:21123589-21123608 Msa1096550:CDS 45.0%
!! ATTGTGAGGGCTTTGGGAAT+GGG - chr7_3:21123595-21123614 Msa1096550:CDS 45.0%
!! TGTATAACAGAGGTTGGTGG+TGG - chr7_3:21123622-21123641 Msa1096550:CDS 45.0%
GTCTCTGCTAACTTATTCGC+AGG - chr7_3:21123660-21123679 Msa1096550:intron 45.0%
TCGCAGGAATTGAACGTTGA+CGG - chr7_3:21123676-21123695 Msa1096550:intron 45.0%
AGGAATTGAACGTTGACGGT+GGG - chr7_3:21123680-21123699 Msa1096550:intron 45.0%
TGGGAAGAGAAGGAGGTTAA+AGG - chr7_3:21123699-21123718 Msa1096550:intron 45.0%
GGGAAGAGAAGGAGGTTAAA+GGG - chr7_3:21123700-21123719 Msa1096550:intron 45.0%
CCCAGGTACCTTATAATCCA+TGG + chr7_3:21123734-21123753 None:intergenic 45.0%
CCATTCAAGAACATTCTCCC+AGG + chr7_3:21123751-21123770 None:intergenic 45.0%
CCTGGGAGAATGTTCTTGAA+TGG - chr7_3:21123748-21123767 Msa1096550:intron 45.0%
GCTTCTATGTATTGCAGGCA+AGG - chr7_3:21123784-21123803 Msa1096550:intron 45.0%
CCCAAACAAGCATAGCATCT+TGG + chr7_3:21123825-21123844 None:intergenic 45.0%
AGATGCTATGCTTGTTTGGG+AGG - chr7_3:21123825-21123844 Msa1096550:intron 45.0%
! GCCAGTCACAAACCCATTTT+AGG + chr7_3:21124148-21124167 None:intergenic 45.0%
!! AATGGGTTTGTGACTGGCTT+TGG - chr7_3:21124150-21124169 Msa1096550:intron 45.0%
TCATGGACCTTATGGCCATA+GGG - chr7_3:21124702-21124721 Msa1096550:CDS 45.0%
TTTGCAACCCTATGGCCATA+AGG + chr7_3:21124712-21124731 None:intergenic 45.0%
AGCAGTTACCTTGATCAAGC+AGG - chr7_3:21124999-21125018 Msa1096550:intron 45.0%
GTTGCTTACCTGCTTGATCA+AGG + chr7_3:21125010-21125029 None:intergenic 45.0%
CCAGCCCCTAAAAGAACATA+AGG + chr7_3:21125103-21125122 None:intergenic 45.0%
!! CCTTATGTTCTTTTAGGGGC+TGG - chr7_3:21125100-21125119 Msa1096550:intron 45.0%
GGACCTTGTCATTGGAAATG+TGG - chr7_3:21125121-21125140 Msa1096550:intron 45.0%
CCTTGTCATTGGAAATGTGG+GGG - chr7_3:21125124-21125143 Msa1096550:intron 45.0%
!! GGGGATTCTAGAGCTGTATT+GGG - chr7_3:21125143-21125162 Msa1096550:intron 45.0%
AAGAGAATCCTCGTGATCTC+GGG + chr7_3:21125171-21125190 None:intergenic 45.0%
AGACACAAAGACTGAGAAGG+GGG + chr7_3:21125358-21125377 None:intergenic 45.0%
GTTGTGTTGGAGCAATGGAT+TGG - chr7_3:21125589-21125608 Msa1096550:intron 45.0%
GAGAGGATCAGACATCGTAA+AGG - chr7_3:21125807-21125826 Msa1096550:CDS 45.0%
GGATCAGACATCGTAAAGGA+AGG - chr7_3:21125811-21125830 Msa1096550:CDS 45.0%
AGAATGAACCAGATGTGGCT+CGG - chr7_3:21125847-21125866 Msa1096550:CDS 45.0%
AGACCTGGGAAATCAGAGTT+AGG + chr7_3:21125882-21125901 None:intergenic 45.0%
TAACTCTGATTTCCCAGGTC+TGG - chr7_3:21125881-21125900 Msa1096550:CDS 45.0%
ATATCACCGCCTTACAGAGA+AGG - chr7_3:21125971-21125990 Msa1096550:intron 45.0%
TGTTAGCAACAGATGGGGTA+AGG - chr7_3:21126006-21126025 Msa1096550:intron 45.0%
GCTGTTGAGACATGCTTGAT+TGG - chr7_3:21126475-21126494 Msa1096550:intron 45.0%
TTGAGACATGCTTGATTGGG+TGG - chr7_3:21126479-21126498 Msa1096550:intron 45.0%
TGAGACATGCTTGATTGGGT+GGG - chr7_3:21126480-21126499 Msa1096550:intron 45.0%
AGCATTTCCCCTGAAAGTTC+TGG - chr7_3:21126632-21126651 Msa1096550:intron 45.0%
GGCAAAATGCCAGAACTTTC+AGG + chr7_3:21126644-21126663 None:intergenic 45.0%
CGAAGAAGTTGTGGAGATTG+TGG - chr7_3:21126983-21127002 Msa1096550:CDS 45.0%
GTCTACTGCTGCTAGATTAC+TGG - chr7_3:21127019-21127038 Msa1096550:CDS 45.0%
! TTGGACAGCATTTGATGGGT+GGG - chr7_3:21127399-21127418 Msa1096550:intron 45.0%
! TGTTTTGCATCCGGAGGAAA+AGG - chr7_3:21127443-21127462 Msa1096550:intron 45.0%
! GTTTTGCATCCGGAGGAAAA+GGG - chr7_3:21127444-21127463 Msa1096550:intron 45.0%
! TTTTGCATCCGGAGGAAAAG+GGG - chr7_3:21127445-21127464 Msa1096550:intron 45.0%
!!! TTTTTTTTTTTTTTTTGAAA+TGG - chr7_3:21123203-21123222 Msa1096550:three_prime_UTR 5.0%
GTTGTGGTTGAGAGGAGAAG+CGG + chr7_3:21122864-21122883 None:intergenic 50.0%
! GGAACGGATTTGGTTGGAGA+AGG - chr7_3:21123523-21123542 Msa1096550:CDS 50.0%
! GGATTTGGTTGGAGAAGGGA+GGG - chr7_3:21123528-21123547 Msa1096550:CDS 50.0%
! GATTTGGTTGGAGAAGGGAG+GGG - chr7_3:21123529-21123548 Msa1096550:CDS 50.0%
AGAAGGGAGGGGATCAGATT+CGG - chr7_3:21123540-21123559 Msa1096550:CDS 50.0%
!! CATTGTGAGGGCTTTGGGAA+TGG - chr7_3:21123594-21123613 Msa1096550:CDS 50.0%
CAGGAATTGAACGTTGACGG+TGG - chr7_3:21123679-21123698 Msa1096550:intron 50.0%
ACCAGCGCAAAACCCATCTT+GGG + chr7_3:21124090-21124109 None:intergenic 50.0%
AACCAGCGCAAAACCCATCT+TGG + chr7_3:21124091-21124110 None:intergenic 50.0%
!!! TGGGTTTTGCGCTGGTTTGT+TGG - chr7_3:21124094-21124113 Msa1096550:intron 50.0%
!!! AAGGAGGGCACCGTTTTTTG+TGG - chr7_3:21124667-21124686 Msa1096550:CDS 50.0%
GTCATGGACCTTATGGCCAT+AGG - chr7_3:21124701-21124720 Msa1096550:CDS 50.0%
CCCCCACATTTCCAATGACA+AGG + chr7_3:21125127-21125146 None:intergenic 50.0%
!! GGGGGATTCTAGAGCTGTAT+TGG - chr7_3:21125142-21125161 Msa1096550:intron 50.0%
GATGTGTGTGTGTGTGTGTG+TGG + chr7_3:21125331-21125350 None:intergenic 50.0%
CAAAGACTGAGAAGGGGGTT+GGG + chr7_3:21125353-21125372 None:intergenic 50.0%
ACAAAGACTGAGAAGGGGGT+TGG + chr7_3:21125354-21125373 None:intergenic 50.0%
GAATGAACCAGATGTGGCTC+GGG - chr7_3:21125848-21125867 Msa1096550:CDS 50.0%
CTGCCTAACTCTGATTTCCC+AGG - chr7_3:21125876-21125895 Msa1096550:CDS 50.0%
TGATTTCCCAGGTCTGGCTA+TGG - chr7_3:21125887-21125906 Msa1096550:CDS 50.0%
AGGCGGTGATATGAGACATC+TGG + chr7_3:21125963-21125982 None:intergenic 50.0%
AATCTAGCAGCAGTAGACCG+CGG + chr7_3:21127017-21127036 None:intergenic 50.0%
! ATCTGGTGTCAGCTTGTCTG+TGG + chr7_3:21127156-21127175 None:intergenic 50.0%
ACTGGGTCTGTTGATGCATC+TGG + chr7_3:21127173-21127192 None:intergenic 50.0%
CACCCATCAAATGCTGTCCA+AGG + chr7_3:21127400-21127419 None:intergenic 50.0%
CTTGGACAGCATTTGATGGG+TGG - chr7_3:21127398-21127417 Msa1096550:intron 50.0%
! TGGACAGCATTTGATGGGTG+GGG - chr7_3:21127400-21127419 Msa1096550:intron 50.0%
! GCATTTGATGGGTGGGGTAT+TGG - chr7_3:21127406-21127425 Msa1096550:intron 50.0%
!! TTTGATGGGTGGGGTATTGG+AGG - chr7_3:21127409-21127428 Msa1096550:intron 50.0%
! CGGATTTGGTTGGAGAAGGG+AGG - chr7_3:21123527-21123546 Msa1096550:CDS 55.0%
ACGTTGACGGTGGGAAGAGA+AGG - chr7_3:21123689-21123708 Msa1096550:intron 55.0%
TTGACGGTGGGAAGAGAAGG+AGG - chr7_3:21123692-21123711 Msa1096550:intron 55.0%
!! TCCCAAGATGGGTTTTGCGC+TGG - chr7_3:21124086-21124105 Msa1096550:intron 55.0%
TAGGGGCTGGACCTTGTCAT+TGG - chr7_3:21125113-21125132 Msa1096550:intron 55.0%
ATTGGGAACCCGAGATCACG+AGG - chr7_3:21125160-21125179 Msa1096550:intron 55.0%
! AACCAGATGTGGCTCGGGTT+TGG - chr7_3:21125853-21125872 Msa1096550:CDS 55.0%
AGATTGTGGCATCTGCACCG+CGG - chr7_3:21126997-21127016 Msa1096550:CDS 55.0%
! ATCCGGAGGAAAAGGGGTAC+CGG - chr7_3:21127451-21127470 Msa1096550:intron 55.0%
GTCACGAGTGGTTGCGTCAG+CGG + chr7_3:21122833-21122852 None:intergenic 60.0%
GCTGACGCAACCACTCGTGA+CGG - chr7_3:21122832-21122851 Msa1096550:three_prime_UTR 60.0%
!! ACAGAGGTTGGTGGTGGTGC+TGG - chr7_3:21123628-21123647 Msa1096550:CDS 60.0%
AGCCAAACCCGAGCCACATC+TGG + chr7_3:21125858-21125877 None:intergenic 60.0%
TCCCAGGTCTGGCTATGGCA+CGG - chr7_3:21125892-21125911 Msa1096550:CDS 60.0%
! CTGGCTATGGCACGGGCTTT+TGG - chr7_3:21125900-21125919 Msa1096550:CDS 60.0%
!! TCCGGAGGAAAAGGGGTACC+GGG - chr7_3:21127452-21127471 Msa1096550:intron 60.0%
!! GAGGTTGGTGGTGGTGCTGG+TGG - chr7_3:21123631-21123650 Msa1096550:CDS 65.0%
CCCGTGCCATAGCCAGACCT+GGG + chr7_3:21125896-21125915 None:intergenic 65.0%
CCCAGGTCTGGCTATGGCAC+GGG - chr7_3:21125893-21125912 Msa1096550:CDS 65.0%
! GCCCGGTACCCCTTTTCCTC+CGG + chr7_3:21127456-21127475 None:intergenic 65.0%
GTTGCGTCAGCGGCAGGTGG+TGG + chr7_3:21122823-21122842 None:intergenic 70.0%
GTGGTTGCGTCAGCGGCAGG+TGG + chr7_3:21122826-21122845 None:intergenic 70.0%
CGAGTGGTTGCGTCAGCGGC+AGG + chr7_3:21122829-21122848 None:intergenic 70.0%
GCGGTAGCGTCCGTCACGAG+TGG + chr7_3:21122845-21122864 None:intergenic 70.0%
GCCCGTGCCATAGCCAGACC+TGG + chr7_3:21125897-21125916 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 21122722 21127894 21122722 ID=Msa1096550;Name=Msa1096550
chr7_3 mRNA 21122722 21127894 21122722 ID=Msa1096550-mRNA-1;Parent=Msa1096550;Name=Msa1096550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=372|1|1|1|1|1|6|638|452
chr7_3 exon 21122722 21123653 21122722 ID=Msa1096550-mRNA-1:exon:4591;Parent=Msa1096550-mRNA-1
chr7_3 exon 21124594 21124817 21124594 ID=Msa1096550-mRNA-1:exon:4590;Parent=Msa1096550-mRNA-1
chr7_3 exon 21125383 21125500 21125383 ID=Msa1096550-mRNA-1:exon:4589;Parent=Msa1096550-mRNA-1
chr7_3 exon 21125596 21125961 21125596 ID=Msa1096550-mRNA-1:exon:4588;Parent=Msa1096550-mRNA-1
chr7_3 exon 21126770 21127117 21126770 ID=Msa1096550-mRNA-1:exon:4587;Parent=Msa1096550-mRNA-1
chr7_3 exon 21127514 21127894 21127514 ID=Msa1096550-mRNA-1:exon:4586;Parent=Msa1096550-mRNA-1
chr7_3 five_prime_UTR 21127523 21127894 21127523 ID=Msa1096550-mRNA-1:five_prime_utr;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21127514 21127522 21127514 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21126770 21127117 21126770 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21125596 21125961 21125596 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21125383 21125500 21125383 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21124594 21124817 21124594 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 CDS 21123360 21123653 21123360 ID=Msa1096550-mRNA-1:cds;Parent=Msa1096550-mRNA-1
chr7_3 three_prime_UTR 21122722 21123359 21122722 ID=Msa1096550-mRNA-1:three_prime_utr;Parent=Msa1096550-mRNA-1
Gene Sequence

>Msa1096550

ATGACTCAGGCTGTGGAAGTTTTGAATCGATATGGAACGGATTTGGTTGGAGAAGGGAGGGGATCAGATTCGGAGTGTTTAGCTGGTTTTGAATGTTTTCTGAACATTGTGAGGGCTTTGGGAATGGGATCTTGTATAACAGAGGTTGGTGGTGGTGCTGGTGGTTCGCAGTCTCTGCTAACTTATTCGCAGGAATTGAACGTTGACGGTGGGAAGAGAAGGAGGTTAAAGGGTTCTTCTACCATGGATTATAAGGTACCTGGGAGAATGTTCTTGAATGGGTCAAGTGAGATTGCTTCTATGTATTGCAGGCAAGGTAAAAAGGGAATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAGGGCACCGTTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAGAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAGTGCACAATGGGATTTGCATCGTAAGAATAAAGATGGAGTCAATGATCAAAATGGTGCTGCCACAAGTTATAATTCTGAAGAGCAAATTAAACTGATTGACGAGAACATTGATCATGAGCTCGATGGAGCAAATACTATCTTGGCACTAAGAGAATCCTATTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAAATGCATCGTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGGCTGGACCTTGTCATTGGAAATGTGGGGGATTCTAGAGCTGTATTGGGAACCCGAGATCACGAGGATTCTCTTATTGCTGTTCAGTTGACTGTTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATCAGACATCGTAAAGGAAGGGTGTTTTCCCTTAAGAATGAACCAGATGTGGCTCGGGTTTGGCTGCCTAACTCTGATTTCCCAGGTCTGGCTATGGCACGGGCTTTTGGAGATTTTTGCCTAAAGGATGTTGGATTGATTTCTGTTCCAGATGTCTCATATCACCGCCTTACAGAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTTTTATCAAACGAAGAAGTTGTGGAGATTGTGGCATCTGCACCGCGGTCTACTGCTGCTAGATTACTGGTTGAGTCAGCTGTTCTTTCTTGGAAGACAAAATTCCCTTACTGTAAGATTGATGATTGTGCTGCGGTGTGCCTCTTCCTTAATTCAAATACAGAGTTGAATGCTGAACATACCACAGACAAGCTGACACCAGATGCATCAACAGACCCAGTTGTTGATCAATCATCTCTACCTAGTGAGAATGGAATTGGAGTGGAAGCCGAAAAACTGCTGTGA
Protein sequence

>Msa1096550

MTQAVEVLNRYGTDLVGEGRGSDSECLAGFECFLNIVRALGMGSCITEVGGGAGGSQSLLTYSQELNVDGGKRRRLKGSSTMDYKVPGRMFLNGSSEIASMYCRQGKKGINQDAMLVWENFCSKEGTVFCGVFDGHGPYGHRVAKKVRDSFPLKLSAQWDLHRKNKDGVNDQNGAATSYNSEEQIKLIDENIDHELDGANTILALRESYLKASKIMDKELKMHRDIDCFCSGTTAVTLIKQGLDLVIGNVGDSRAVLGTRDHEDSLIAVQLTVDLKPNLPKEEERIRHRKGRVFSLKNEPDVARVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVEIVASAPRSTAARLLVESAVLSWKTKFPYCKIDDCAAVCLFLNSNTELNAEHTTDKLTPDASTDPVVDQSSLPSENGIGVEAEKLL*