AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0101020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101020 MtrunA17_Chr1g0149561 97.179 709 19 1 1 709 1 708 0.0 1429
Msa0101020 MtrunA17_Chr4g0075481 36.207 754 371 14 1 659 1 739 2.62e-144 440
Msa0101020 MtrunA17_Chr2g0289351 37.642 441 196 10 251 662 50 440 5.53e-89 286
Msa0101020 MtrunA17_Chr2g0304261 57.377 183 73 3 6 185 2 182 1.42e-60 216
Msa0101020 MtrunA17_Chr7g0237741 31.646 158 93 5 7 152 52 206 4.42e-16 79.0
Msa0101020 MtrunA17_Chr2g0323971 33.913 115 70 4 41 152 98 209 5.91e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101020 AT2G25290.2 59.164 742 264 15 1 707 1 738 0.0 832
Msa0101020 AT2G25290.3 59.164 742 264 15 1 707 1 738 0.0 832
Msa0101020 AT2G25290.4 59.164 742 264 15 1 707 1 738 0.0 832
Msa0101020 AT2G25290.1 59.164 742 264 15 1 707 1 738 0.0 832
Msa0101020 AT4G32070.2 55.357 784 264 18 1 707 1 775 0.0 808
Msa0101020 AT4G32070.1 55.357 784 264 18 1 707 1 775 0.0 808
Msa0101020 AT5G20360.5 39.623 689 385 13 38 705 33 711 1.29e-163 488
Msa0101020 AT5G20360.6 39.623 689 385 13 38 705 33 711 1.29e-163 488
Msa0101020 AT5G20360.7 39.623 689 385 13 38 705 63 741 2.63e-163 489
Msa0101020 AT5G20360.4 39.623 689 385 13 38 705 63 741 2.63e-163 489
Msa0101020 AT5G20360.3 39.623 689 385 13 38 705 113 791 1.73e-162 488
Msa0101020 AT5G20360.1 39.623 689 385 13 38 705 123 801 2.92e-162 488
Msa0101020 AT5G20360.2 39.623 689 385 13 38 705 123 801 2.92e-162 488
Msa0101020 AT1G62390.1 37.464 702 366 10 31 662 41 739 1.60e-145 443
Msa0101020 AT3G58620.2 36.885 122 70 3 45 166 453 567 4.18e-12 70.1
Msa0101020 AT3G58620.1 36.885 122 70 3 45 166 453 567 4.71e-12 69.7
Msa0101020 AT4G30480.2 34.532 139 78 4 41 169 105 240 1.08e-11 66.6

Find 217 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTTGGCTTTGTTTAAT+TGG 0.077180 1_3:+7521294 Msa0101020:CDS
TGCTTTGGCTTTGTTTAATT+GGG 0.159575 1_3:+7521295 Msa0101020:CDS
TAATGCACAGTTAGAGAAAA+TGG 0.163980 1_3:+7521697 Msa0101020:CDS
TTCTTGTTGTTGTTTGATTT+TGG 0.181726 1_3:-7520018 None:intergenic
GGCGTTGAATCGGTTGGATT+TGG 0.260217 1_3:+7520359 Msa0101020:CDS
GGATAGGTATCCGGGGTTAA+AGG 0.285842 1_3:+7520854 Msa0101020:CDS
CGCGGTTTAGGAAAGTTGTT+AGG 0.290109 1_3:+7520541 Msa0101020:CDS
ACAATAAGGTGCCCCATAAA+AGG 0.298701 1_3:-7521796 None:intergenic
GTGGCTGTTGTGTGTAGGTT+AGG 0.301436 1_3:-7519785 None:intergenic
GCAGAGGACAGCATGGAAAA+AGG 0.303320 1_3:+7521611 Msa0101020:CDS
GTATATTACGCAGGTGGATT+TGG 0.303895 1_3:+7520983 Msa0101020:CDS
AAAATATTGAAGAATAAAAT+AGG 0.304235 1_3:-7522250 None:intergenic
GTTTGATTCTGATTCGTATC+TGG 0.333235 1_3:+7521160 Msa0101020:CDS
ATAAGGGTGTTGGGGCTAAT+AGG 0.333240 1_3:+7521078 Msa0101020:CDS
TTTGGCTTGTCATTCTTTAG+AGG 0.335912 1_3:+7522214 Msa0101020:three_prime_UTR
TACGCAGGTGGATTTGGATA+TGG 0.341945 1_3:+7520989 Msa0101020:CDS
GTGAGGTGAGAGGGGAGAAT+GGG 0.343540 1_3:+7521042 Msa0101020:CDS
TTATACAATTCTATTTCTTC+CGG 0.343726 1_3:+7524068 Msa0101020:three_prime_UTR
GATGGATTGGAGGGTGTAAA+AGG 0.344106 1_3:-7519724 None:intergenic
GGGGAATGTTCACTTGTCTA+AGG 0.350249 1_3:+7521316 Msa0101020:CDS
TGATAGTTTGAGGATTACTA+TGG 0.351621 1_3:+7520446 Msa0101020:CDS
TCATTACAACTTCATTCATT+TGG 0.352394 1_3:+7519816 Msa0101020:five_prime_UTR
GATTCCATTTGTTGGTTTGA+AGG 0.352952 1_3:+7523954 Msa0101020:three_prime_UTR
AGTATTTGATTTGCCATTAG+AGG 0.355207 1_3:+7523888 Msa0101020:three_prime_UTR
CAGTATATGATTCCATTTGT+TGG 0.356548 1_3:+7523946 Msa0101020:three_prime_UTR
TAAGGATAGGGAAGGTGATT+TGG 0.357323 1_3:+7520893 Msa0101020:CDS
AGCCGCCTGCTGCGCGGTTT+AGG 0.357668 1_3:+7520529 Msa0101020:CDS
GTTTCAAGAGATGGCTGCTT+TGG 0.361028 1_3:+7521280 Msa0101020:CDS
TCCAACGCAGTTGAATTATT+CGG 0.366515 1_3:-7520417 None:intergenic
TATTAGATGGGCGCAGTTGC+CGG 0.370574 1_3:+7520794 Msa0101020:CDS
GGGTGTTCTTGTGAAGTATA+AGG 0.372992 1_3:+7520875 Msa0101020:CDS
ACCAACATGGGAGGAATGTT+TGG 0.374580 1_3:+7521853 Msa0101020:CDS
GGCCATGTGTTATATGCAAT+TGG 0.379545 1_3:+7520236 Msa0101020:CDS
AAGAAGAAGAAAGGGCATAA+AGG 0.384960 1_3:+7520576 Msa0101020:CDS
TTCTGAAGAAGCTGAAGATC+AGG 0.386284 1_3:+7521748 Msa0101020:CDS
AGGACTGTGAAGTTGATATA+TGG 0.388536 1_3:+7520765 Msa0101020:CDS
GGATAGTAACGAAGTTGTTA+AGG 0.389904 1_3:+7520725 Msa0101020:CDS
GGCTGTTTAAGAACCATGTT+GGG 0.393596 1_3:+7521138 Msa0101020:CDS
TATATGGAGAGGATATTAGA+TGG 0.397585 1_3:+7520781 Msa0101020:CDS
ATGGGCTACGAAGGAGTATA+AGG 0.401726 1_3:+7521412 Msa0101020:CDS
AAGATTAATAAGAAGAAGAA+AGG 0.408833 1_3:+7520567 Msa0101020:CDS
GAGAAGGAGATAAGGGTGTT+GGG 0.411879 1_3:+7521069 Msa0101020:CDS
TGGCTGTTGTGTGTAGGTTA+GGG 0.412914 1_3:-7519784 None:intergenic
TGAGTAGTGGTGAGGTGAGA+GGG 0.413021 1_3:+7521033 Msa0101020:CDS
TACGAGGGACTCCTAGCTCT+TGG 0.413739 1_3:+7521482 Msa0101020:CDS
TGATGAGACTGAGATTGCTT+TGG 0.414076 1_3:+7520488 Msa0101020:CDS
AACAGAACGCTCATACAATA+AGG 0.415328 1_3:-7521810 None:intergenic
CTTACTCACCTGCCTTTGAA+TGG 0.416578 1_3:-7522287 None:intergenic
GGTGAGGTGAGAGGGGAGAA+TGG 0.419918 1_3:+7521041 Msa0101020:CDS
GTGAGAGGGGAGAATGGGGT+TGG 0.422494 1_3:+7521047 Msa0101020:CDS
ATTGAGGAACAGCGTTTGAA+TGG 0.424825 1_3:+7521653 Msa0101020:CDS
GGGGAGAATGGGGTTGGAGA+AGG 0.425637 1_3:+7521053 Msa0101020:CDS
AAATGTTAATGTTAATGTTA+AGG 0.428883 1_3:+7520659 Msa0101020:CDS
TGGAGATTCTTGATAGTTTG+AGG 0.428936 1_3:+7520436 Msa0101020:CDS
AGCTGCAGAACCTCCTCAAA+AGG 0.429826 1_3:-7521578 None:intergenic
GATACTAGGATTAGAAAGAT+TGG 0.430226 1_3:+7523861 Msa0101020:three_prime_UTR
TGTGATAAGGGATAGGTATC+CGG 0.440872 1_3:+7520845 Msa0101020:CDS
AAAATTGTTCCAGGATGTAA+TGG 0.443210 1_3:-7522185 None:intergenic
GAAGGATAAGGTTACGGATA+AGG 0.446110 1_3:+7520698 Msa0101020:CDS
CTCGACCCGTCTTCCTGAAA+AGG 0.446613 1_3:-7521353 None:intergenic
ATCTGGATATTCATGAGGTT+GGG 0.451158 1_3:+7521177 Msa0101020:CDS
GGTTGGGATGAAGATATATT+CGG 0.451414 1_3:+7521193 Msa0101020:CDS
TGGGGTTGGAGAAGGAGATA+AGG 0.452188 1_3:+7521061 Msa0101020:CDS
TGTTATATGCAATTGGGTCT+TGG 0.453077 1_3:+7520243 Msa0101020:CDS
GTGATAAGGGATAGGTATCC+GGG 0.453408 1_3:+7520846 Msa0101020:CDS
AGGATTACTATGGAGGAGAA+AGG 0.457524 1_3:+7520456 Msa0101020:CDS
ATTACCTTCAAACCAACAAA+TGG 0.459199 1_3:-7523958 None:intergenic
AACATTAACATTTCCAACAT+TGG 0.459292 1_3:-7520649 None:intergenic
AACAATAAGAATATCGAAGT+TGG 0.461398 1_3:+7521554 Msa0101020:CDS
ACGAGGGACTCCTAGCTCTT+GGG 0.465698 1_3:+7521483 Msa0101020:CDS
GCTGAGGGTTGTCATGTGCT+TGG 0.466822 1_3:+7520948 Msa0101020:CDS
GGGTGAAGATTCGAAGGATA+AGG 0.466903 1_3:+7520686 Msa0101020:CDS
GCTTTGGCTTTGTTTAATTG+GGG 0.471043 1_3:+7521296 Msa0101020:CDS
TATCTGGATATTCATGAGGT+TGG 0.472474 1_3:+7521176 Msa0101020:CDS
GTTGGTGAGAGATGTGATAA+GGG 0.473972 1_3:+7520833 Msa0101020:CDS
GATAGGTATCCGGGGTTAAA+GGG 0.478058 1_3:+7520855 Msa0101020:CDS
AGATTAATAAGAAGAAGAAA+GGG 0.479602 1_3:+7520568 Msa0101020:CDS
AGATCGATGGGGAAACCAGC+TGG 0.483060 1_3:+7519973 Msa0101020:exon
GTATTTGATTTGCCATTAGA+GGG 0.483155 1_3:+7523889 Msa0101020:three_prime_UTR
TTTGTAGAGATTGGGATACT+AGG 0.484831 1_3:+7523847 Msa0101020:three_prime_UTR
GGGGTTGGAGAAGGAGATAA+GGG 0.485908 1_3:+7521062 Msa0101020:CDS
AATGCACAGTTAGAGAAAAT+GGG 0.486916 1_3:+7521698 Msa0101020:CDS
GGAGAAGGAGATAAGGGTGT+TGG 0.487702 1_3:+7521068 Msa0101020:CDS
TTGAGCAAGCAAAGCTATGC+TGG 0.490157 1_3:+7521516 Msa0101020:CDS
CTTGCATTCCATTCAAAGGC+AGG 0.494025 1_3:+7522279 Msa0101020:three_prime_UTR
GAGTAGTGGTGAGGTGAGAG+GGG 0.494532 1_3:+7521034 Msa0101020:CDS
AGTGTTACGAGGCGTTGAAT+CGG 0.494656 1_3:+7520349 Msa0101020:CDS
TCACAAGAATTAAGAGAAGA+AGG 0.494937 1_3:+7520099 Msa0101020:CDS
ATGTTAAAGCTGGATATGAA+TGG 0.495987 1_3:+7521393 Msa0101020:CDS
GTCATGTGCTTGGTTCGATC+CGG 0.496468 1_3:+7520958 Msa0101020:CDS
TAAGGTTACGGATAAGGATA+AGG 0.497434 1_3:+7520704 Msa0101020:CDS
AGTTGGTGAGAGATGTGATA+AGG 0.498390 1_3:+7520832 Msa0101020:CDS
TCCAGGATGTAATGGAGTCT+TGG 0.500662 1_3:-7522177 None:intergenic
TTCTGAGTTGAGGTTAGCTG+AGG 0.503420 1_3:+7520932 Msa0101020:CDS
GAGAAGAAAGCCACCAATGT+TGG 0.504400 1_3:+7520636 Msa0101020:CDS
CTTTGGCTTTGTTTAATTGG+GGG 0.508071 1_3:+7521297 Msa0101020:CDS
ATGAGTAGTGGTGAGGTGAG+AGG 0.509195 1_3:+7521032 Msa0101020:CDS
GTTGATGTGGGAGGAGATTG+AGG 0.511356 1_3:+7521637 Msa0101020:CDS
GGATTACTATGGAGGAGAAA+GGG 0.511446 1_3:+7520457 Msa0101020:CDS
TTACGAGGCGTTGAATCGGT+TGG 0.511704 1_3:+7520353 Msa0101020:CDS
TGTTAAAGCTGGATATGAAT+GGG 0.512823 1_3:+7521394 Msa0101020:CDS
GAAGATATATTCGGAGGCGA+TGG 0.514826 1_3:+7521202 Msa0101020:CDS
AGGAAGATAAAGCGGTTACT+AGG 0.515733 1_3:+7520745 Msa0101020:CDS
TCTGTTGTGGAATTTAAGCT+AGG 0.515915 1_3:+7521827 Msa0101020:CDS
GACTCGAACCATTGTTTCGT+CGG 0.516704 1_3:+7522148 Msa0101020:CDS
TGAAGTCAACGTGGATGGAT+TGG 0.523020 1_3:-7519737 None:intergenic
AATGTCAGTTGTAGAAGCTC+CGG 0.523785 1_3:-7521903 None:intergenic
AGGCTGTTTAAGAACCATGT+TGG 0.526266 1_3:+7521137 Msa0101020:CDS
GCCGAATAATTCAACTGCGT+TGG 0.526616 1_3:+7520416 Msa0101020:CDS
AATGGTTCGAGTCGGAAAGT+TGG 0.527329 1_3:-7522138 None:intergenic
TGCAGTGTGCTATACAATAC+CGG 0.527574 1_3:-7524087 None:intergenic
TCTCTCGAGCATGTTAAAGC+TGG 0.529882 1_3:+7521383 Msa0101020:CDS
AGTATTGATTCATAGATCGA+TGG 0.529960 1_3:+7519960 Msa0101020:exon
TGCGGATAAGTTTCAAGAGA+TGG 0.533330 1_3:+7521271 Msa0101020:CDS
GCGGTTTAGGAAAGTTGTTA+GGG 0.534543 1_3:+7520542 Msa0101020:CDS
AGATTCGAAGGATAAGGTTA+CGG 0.534915 1_3:+7520692 Msa0101020:CDS
ACTTTCCTAAACCGCGCAGC+AGG 0.535349 1_3:-7520534 None:intergenic
TAGTTTGAGGATTACTATGG+AGG 0.535558 1_3:+7520449 Msa0101020:CDS
GTTGAAAAGTTTGAACTAGC+CGG 0.537285 1_3:+7521884 Msa0101020:CDS
AGGAGTCCCTCGTAGAAGTC+CGG 0.537617 1_3:-7521473 None:intergenic
TGAGAGATGTGATAAGGGAT+AGG 0.541480 1_3:+7520838 Msa0101020:CDS
TTATGTGAAGTCAACGTGGA+TGG 0.545002 1_3:-7519742 None:intergenic
GCATGGAATGAGATGTATGA+TGG 0.545970 1_3:+7522099 Msa0101020:CDS
TTGCTGTTTCATTAGAACAA+TGG 0.546528 1_3:-7521943 None:intergenic
AGAATCTGTGAAAATCAAAC+CGG 0.549691 1_3:+7521454 Msa0101020:CDS
ATTAACATTTCCAACATTGG+TGG 0.550948 1_3:-7520646 None:intergenic
TCTGAGTTGAGGTTAGCTGA+GGG 0.552191 1_3:+7520933 Msa0101020:CDS
GATATATTCGGAGGCGATGG+AGG 0.553793 1_3:+7521205 Msa0101020:CDS
GGATGATTACTGTGGAGGAA+TGG 0.555855 1_3:+7521099 Msa0101020:CDS
GGTGAAGGGTGAAGATTCGA+AGG 0.556597 1_3:+7520680 Msa0101020:CDS
TTCTTGTGAAGTATAAGGAT+AGG 0.556963 1_3:+7520880 Msa0101020:CDS
TCGATGACATAGTGCAAGCA+TGG 0.557013 1_3:+7522082 Msa0101020:CDS
AAGGCTTGCATTCCATTCAA+AGG 0.557191 1_3:+7522275 Msa0101020:three_prime_UTR
GTATTGATTCATAGATCGAT+GGG 0.558921 1_3:+7519961 Msa0101020:exon
GCCATGTGTTATATGCAATT+GGG 0.559073 1_3:+7520237 Msa0101020:CDS
ATTCAACGCCTCGTAACACT+TGG 0.561428 1_3:-7520346 None:intergenic
GCTGCAGAACCTCCTCAAAA+GGG 0.561685 1_3:-7521577 None:intergenic
AAGTAGAGCCGCCTGCTGCG+CGG 0.563860 1_3:+7520523 Msa0101020:CDS
ACAAGAACACCCTTTAACCC+CGG 0.566730 1_3:-7520864 None:intergenic
TGAGGTGAGAGGGGAGAATG+GGG 0.567723 1_3:+7521043 Msa0101020:CDS
TCATTATGTCAACTATGTGA+TGG 0.568270 1_3:+7523791 Msa0101020:three_prime_UTR
TCTTGTGAAGTATAAGGATA+GGG 0.568474 1_3:+7520881 Msa0101020:CDS
AATGTTAATGTTAAGGTGAA+GGG 0.568909 1_3:+7520666 Msa0101020:CDS
GGAACACGCCGACGAAACAA+TGG 0.570618 1_3:-7522156 None:intergenic
AACATGGGAGGAATGTTTGG+AGG 0.573058 1_3:+7521856 Msa0101020:CDS
CATATAACACATGGCCATGT+TGG 0.573374 1_3:-7520229 None:intergenic
AAGAAAGGGCATAAAGGAGA+AGG 0.575305 1_3:+7520582 Msa0101020:CDS
ACTGTTGATACCCAAGAGCT+AGG 0.576141 1_3:-7521493 None:intergenic
AAGGAGAAGGCGAGGAAGAG+CGG 0.579153 1_3:+7520595 Msa0101020:CDS
ATTTGATTTGCCATTAGAGG+GGG 0.581931 1_3:+7523891 Msa0101020:three_prime_UTR
TCCAAGACTCCATTACATCC+TGG 0.582606 1_3:+7522176 Msa0101020:CDS
TTACTACTACTTCTGAGTTG+AGG 0.582702 1_3:+7520922 Msa0101020:CDS
CCACCTGCGTAATATACAGC+CGG 0.584515 1_3:-7520977 None:intergenic
GTTGTGTGGCTGTTGTGTGT+AGG 0.584894 1_3:-7519790 None:intergenic
CATTATGTCAACTATGTGAT+GGG 0.586777 1_3:+7523792 Msa0101020:three_prime_UTR
GAGGATTCAGTGACGAATGA+TGG 0.587808 1_3:+7521224 Msa0101020:CDS
TAATGTTAATGTTAAGGTGA+AGG 0.589069 1_3:+7520665 Msa0101020:CDS
AATGGCTTGTTCAGTTTGCG+AGG 0.590314 1_3:+7521117 Msa0101020:CDS
TCCAAACATTCCTCCCATGT+TGG 0.593550 1_3:-7521854 None:intergenic
TTAGAGAAAATGGGTTTGCA+CGG 0.595862 1_3:+7521707 Msa0101020:CDS
AGAAGGAGATAAGGGTGTTG+GGG 0.600333 1_3:+7521070 Msa0101020:CDS
TTCCTAAACCGCGCAGCAGG+CGG 0.600423 1_3:-7520531 None:intergenic
ATATGGAGAGGATATTAGAT+GGG 0.603947 1_3:+7520782 Msa0101020:CDS
TAATAGGATGATTACTGTGG+AGG 0.608454 1_3:+7521094 Msa0101020:CDS
TTGCACTCGTTAATCGCTCG+AGG 0.610141 1_3:-7520273 None:intergenic
TGGATATGAATGGGCTACGA+AGG 0.610634 1_3:+7521403 Msa0101020:CDS
TAACAAGGCAGAGGACAGCA+TGG 0.611758 1_3:+7521604 Msa0101020:CDS
GGTGAATTGTAGTATGAAGT+TGG 0.612990 1_3:+7520815 Msa0101020:CDS
AGAAGAGCTTTACTATACCT+CGG 0.613368 1_3:-7520315 None:intergenic
AGTCAACGTGGATGGATTGG+AGG 0.614072 1_3:-7519734 None:intergenic
ATCAAACCGGACTTCTACGA+GGG 0.616046 1_3:+7521467 Msa0101020:CDS
ATTGTATGAGCGTTCTGTTG+TGG 0.617025 1_3:+7521814 Msa0101020:CDS
AACTTCATACTACAATTCAC+CGG 0.617885 1_3:-7520813 None:intergenic
GGTTCTGCAGCTCTATAACA+AGG 0.619781 1_3:+7521589 Msa0101020:CDS
AAAAGGGATGTTGATGTGGG+AGG 0.621444 1_3:+7521628 Msa0101020:CDS
TTGTTCTAATGAAACAGCAA+TGG 0.622294 1_3:+7521946 Msa0101020:CDS
AGGGCATAAAGGAGAAGGCG+AGG 0.623032 1_3:+7520587 Msa0101020:CDS
TATTTGATTTGCCATTAGAG+GGG 0.623324 1_3:+7523890 Msa0101020:three_prime_UTR
TTCGTATCTGGATATTCATG+AGG 0.624473 1_3:+7521172 Msa0101020:CDS
TCTAATGAAACAGCAATGGA+AGG 0.625596 1_3:+7521950 Msa0101020:CDS
AATCAGAATCAAACCCAACA+TGG 0.625835 1_3:-7521151 None:intergenic
AGTTGTTAAGGAAGATAAAG+CGG 0.626540 1_3:+7520737 Msa0101020:CDS
GTGAAGTATAAGGATAGGGA+AGG 0.628310 1_3:+7520885 Msa0101020:CDS
AGTTGTAATGATTCGTTGTG+TGG 0.632436 1_3:-7519804 None:intergenic
TTAAGCTAGGACTACCAACA+TGG 0.632474 1_3:+7521840 Msa0101020:CDS
GCAGCTCTATAACAAGGCAG+AGG 0.632813 1_3:+7521595 Msa0101020:CDS
TTTGATTTGCCATTAGAGGG+GGG 0.633770 1_3:+7523892 Msa0101020:three_prime_UTR
AAGATCAGGCTTCAAAGATG+AGG 0.634249 1_3:+7521762 Msa0101020:CDS
TTGATTTGCCATTAGAGGGG+GGG 0.635677 1_3:+7523893 Msa0101020:three_prime_UTR
TGCACATCTTCACACCAACA+TGG 0.638664 1_3:+7520215 Msa0101020:CDS
TTGTGACATGTTGATGAACA+TGG 0.639131 1_3:-7520082 None:intergenic
TCAAACAACAACAAGAACAA+AGG 0.642821 1_3:+7520024 Msa0101020:CDS
TGTGAAGTTGATATATGGAG+AGG 0.643074 1_3:+7520770 Msa0101020:CDS
GACGAAACAATGGTTCGAGT+CGG 0.643395 1_3:-7522146 None:intergenic
AGAGCTGTTTGATATTGCTG+CGG 0.643756 1_3:+7521253 Msa0101020:CDS
TAGAAGAGCCAAGTGTTACG+AGG 0.646607 1_3:+7520338 Msa0101020:CDS
TGCACTCGTTAATCGCTCGA+GGG 0.647015 1_3:-7520272 None:intergenic
GTCAACGTGGATGGATTGGA+GGG 0.652372 1_3:-7519733 None:intergenic
GGAGCTTCTACAACTGACAT+TGG 0.653645 1_3:+7521905 Msa0101020:CDS
ATGTTCACTTGTCTAAGGCG+AGG 0.655166 1_3:+7521321 Msa0101020:CDS
CCGGCTGTATATTACGCAGG+TGG 0.660415 1_3:+7520977 Msa0101020:CDS
CATGGAATGAGATGTATGAT+GGG 0.662583 1_3:+7522100 Msa0101020:CDS
ACCCAATTGCATATAACACA+TGG 0.669146 1_3:-7520238 None:intergenic
TATGATGAAAAGATGAGTAG+TGG 0.669294 1_3:+7521020 Msa0101020:CDS
TGATAAGGGATAGGTATCCG+GGG 0.671748 1_3:+7520847 Msa0101020:CDS
GATCCGGCTGTATATTACGC+AGG 0.673742 1_3:+7520974 Msa0101020:CDS
TAAGCTAGGACTACCAACAT+GGG 0.675321 1_3:+7521841 Msa0101020:CDS
TTCACTTGTCTAAGGCGAGG+AGG 0.676418 1_3:+7521324 Msa0101020:CDS
TTGCTCTGCAAGTTTCGCCG+AGG 0.682933 1_3:+7520298 Msa0101020:CDS
TGGGATGAAGATATATTCGG+AGG 0.690271 1_3:+7521196 Msa0101020:CDS
TGAAAAGATGAGTAGTGGTG+AGG 0.697497 1_3:+7521025 Msa0101020:CDS
GGCTAATAGGATGATTACTG+TGG 0.700839 1_3:+7521091 Msa0101020:CDS
AATCAAACCGGACTTCTACG+AGG 0.700981 1_3:+7521466 Msa0101020:CDS
GAAGATGTGCAACATCTATG+TGG 0.701400 1_3:-7520203 None:intergenic
GCTAGGACTACCAACATGGG+AGG 0.703040 1_3:+7521844 Msa0101020:CDS
GGAATGAGATGTATGATGGG+TGG 0.713527 1_3:+7522103 Msa0101020:CDS
TATTGATTCATAGATCGATG+GGG 0.736164 1_3:+7519962 Msa0101020:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAAAAAAAATCAATTTTT+AGG - chr1_3:7519843-7519862 None:intergenic 10.0%
!!! TAAAATATTTGAAACATAAA+AGG - chr1_3:7522021-7522040 None:intergenic 10.0%
!!! TTTTATGTTTCAAATATTTT+AGG + chr1_3:7522020-7522039 Msa0101020:intron 10.0%
!!! TTTATGTTTCAAATATTTTA+GGG + chr1_3:7522021-7522040 Msa0101020:intron 10.0%
!! AAAATATTGAAGAATAAAAT+AGG - chr1_3:7522253-7522272 None:intergenic 10.0%
!! TATACATTTAATTAAAATTG+TGG + chr1_3:7522420-7522439 Msa0101020:intron 10.0%
!!! ATATGATTTTACTTTTTAAT+TGG + chr1_3:7523151-7523170 Msa0101020:intron 10.0%
!!! TATGATTTTACTTTTTAATT+GGG + chr1_3:7523152-7523171 Msa0101020:intron 10.0%
!! AAATGTTAATGTTAATGTTA+AGG + chr1_3:7520659-7520678 Msa0101020:CDS 15.0%
!!! TTATTCTTCAATATTTTTGA+AGG + chr1_3:7522256-7522275 Msa0101020:three_prime_UTR 15.0%
!!! TAATTAAAATTGTGGTTTTA+TGG + chr1_3:7522428-7522447 Msa0101020:intron 15.0%
!!! TTATTTTTCAATATAGGTTT+AGG + chr1_3:7523126-7523145 Msa0101020:intron 15.0%
!! GGAAATATTGAATATATTAA+AGG - chr1_3:7523628-7523647 None:intergenic 15.0%
!!! TATTTCCATATAATTTTAAC+CGG + chr1_3:7523641-7523660 Msa0101020:intron 15.0%
!! AAGATTAATAAGAAGAAGAA+AGG + chr1_3:7520567-7520586 Msa0101020:CDS 20.0%
!! AGATTAATAAGAAGAAGAAA+GGG + chr1_3:7520568-7520587 Msa0101020:CDS 20.0%
!! AAAAAACTTAAAATTGTTCC+AGG - chr1_3:7522197-7522216 None:intergenic 20.0%
!!! TGGAACAATTTTAAGTTTTT+TGG + chr1_3:7522196-7522215 Msa0101020:exon 20.0%
!! ATTCATAATACTGATACTAA+TGG + chr1_3:7522534-7522553 Msa0101020:intron 20.0%
!!! GGTGATTTATTTTTCAATAT+AGG + chr1_3:7523120-7523139 Msa0101020:intron 20.0%
!! TATATTAAAGGATGATTAAG+TGG - chr1_3:7523616-7523635 None:intergenic 20.0%
!! TATAACTGAATTAACGAAAA+TGG - chr1_3:7523691-7523710 None:intergenic 20.0%
!! AATAAAAATATTCAGCTTGA+TGG + chr1_3:7524012-7524031 Msa0101020:three_prime_UTR 20.0%
!! ATAAAAATATTCAGCTTGAT+GGG + chr1_3:7524013-7524032 Msa0101020:three_prime_UTR 20.0%
!!! TTATACAATTCTATTTCTTC+CGG + chr1_3:7524068-7524087 Msa0101020:three_prime_UTR 20.0%
! TCATTACAACTTCATTCATT+TGG + chr1_3:7519816-7519835 Msa0101020:five_prime_UTR 25.0%
!!! TTCTTGTTGTTGTTTGATTT+TGG - chr1_3:7520021-7520040 None:intergenic 25.0%
! AACATTAACATTTCCAACAT+TGG - chr1_3:7520652-7520671 None:intergenic 25.0%
! TAATGTTAATGTTAAGGTGA+AGG + chr1_3:7520665-7520684 Msa0101020:CDS 25.0%
! AATGTTAATGTTAAGGTGAA+GGG + chr1_3:7520666-7520685 Msa0101020:CDS 25.0%
! AACAATAAGAATATCGAAGT+TGG + chr1_3:7521554-7521573 Msa0101020:CDS 25.0%
!! GATACAGATATACCTTTTAT+GGG + chr1_3:7521784-7521803 Msa0101020:CDS 25.0%
!! ATACAGATATACCTTTTATG+GGG + chr1_3:7521785-7521804 Msa0101020:CDS 25.0%
!!! TGGCATCTAAAAGTTTTAAA+AGG + chr1_3:7522396-7522415 Msa0101020:intron 25.0%
!!! AATTGTGGTTTTATGGTTTA+TGG + chr1_3:7522435-7522454 Msa0101020:intron 25.0%
!!! GTTAAGGTTTTAAACTAGTT+TGG + chr1_3:7522798-7522817 Msa0101020:intron 25.0%
! CATATGAGGACATAATTTAA+AGG - chr1_3:7522985-7523004 None:intergenic 25.0%
!!! TCTCTTTCTTTTTTCATATG+AGG - chr1_3:7522999-7523018 None:intergenic 25.0%
! TTCAAATCTCATCGTTAAAT+AGG + chr1_3:7523301-7523320 Msa0101020:intron 25.0%
! TTGACATTTATGAAATCTGA+TGG + chr1_3:7523355-7523374 Msa0101020:intron 25.0%
!!! TTTGATATGCTGTTTCATAA+TGG + chr1_3:7523398-7523417 Msa0101020:intron 25.0%
! ATAGACCGGTTAAAATTATA+TGG - chr1_3:7523649-7523668 None:intergenic 25.0%
! GAAGATTAAGTAAAATAGAC+CGG - chr1_3:7523663-7523682 None:intergenic 25.0%
! ATGAAATCATAAAGACTGAA+TGG + chr1_3:7523734-7523753 Msa0101020:intron 25.0%
!!! ATATCAGTTTTGTAGAGATT+GGG + chr1_3:7523839-7523858 Msa0101020:three_prime_UTR 25.0%
!! TTTTTATTGTGTTTGCAAAC+TGG - chr1_3:7524000-7524019 None:intergenic 25.0%
!! AGTATTGATTCATAGATCGA+TGG + chr1_3:7519960-7519979 Msa0101020:exon 30.0%
!! GTATTGATTCATAGATCGAT+GGG + chr1_3:7519961-7519980 Msa0101020:exon 30.0%
!! TATTGATTCATAGATCGATG+GGG + chr1_3:7519962-7519981 Msa0101020:exon 30.0%
TCAAACAACAACAAGAACAA+AGG + chr1_3:7520024-7520043 Msa0101020:CDS 30.0%
TCACAAGAATTAAGAGAAGA+AGG + chr1_3:7520099-7520118 Msa0101020:CDS 30.0%
TTCCAAAAAAAAGACAACGA+AGG + chr1_3:7520135-7520154 Msa0101020:CDS 30.0%
TGATAGTTTGAGGATTACTA+TGG + chr1_3:7520446-7520465 Msa0101020:CDS 30.0%
ATTAACATTTCCAACATTGG+TGG - chr1_3:7520649-7520668 None:intergenic 30.0%
AGTTGTTAAGGAAGATAAAG+CGG + chr1_3:7520737-7520756 Msa0101020:CDS 30.0%
TATATGGAGAGGATATTAGA+TGG + chr1_3:7520781-7520800 Msa0101020:CDS 30.0%
ATATGGAGAGGATATTAGAT+GGG + chr1_3:7520782-7520801 Msa0101020:CDS 30.0%
AACTTCATACTACAATTCAC+CGG - chr1_3:7520816-7520835 None:intergenic 30.0%
TTCTTGTGAAGTATAAGGAT+AGG + chr1_3:7520880-7520899 Msa0101020:CDS 30.0%
TCTTGTGAAGTATAAGGATA+GGG + chr1_3:7520881-7520900 Msa0101020:CDS 30.0%
! CTCATCTTTTCATCATAACA+CGG - chr1_3:7521017-7521036 None:intergenic 30.0%
TATGATGAAAAGATGAGTAG+TGG + chr1_3:7521020-7521039 Msa0101020:CDS 30.0%
!! TGCTTTGGCTTTGTTTAATT+GGG + chr1_3:7521295-7521314 Msa0101020:CDS 30.0%
ATGTTAAAGCTGGATATGAA+TGG + chr1_3:7521393-7521412 Msa0101020:CDS 30.0%
TGTTAAAGCTGGATATGAAT+GGG + chr1_3:7521394-7521413 Msa0101020:CDS 30.0%
AGAATCTGTGAAAATCAAAC+CGG + chr1_3:7521454-7521473 Msa0101020:CDS 30.0%
TAATGCACAGTTAGAGAAAA+TGG + chr1_3:7521697-7521716 Msa0101020:CDS 30.0%
AATGCACAGTTAGAGAAAAT+GGG + chr1_3:7521698-7521717 Msa0101020:CDS 30.0%
! GGATACAGATATACCTTTTA+TGG + chr1_3:7521783-7521802 Msa0101020:CDS 30.0%
!! TTGCTGTTTCATTAGAACAA+TGG - chr1_3:7521946-7521965 None:intergenic 30.0%
TTGTTCTAATGAAACAGCAA+TGG + chr1_3:7521946-7521965 Msa0101020:CDS 30.0%
!! AAACCACTTTTCATGATTAC+AGG + chr1_3:7522051-7522070 Msa0101020:intron 30.0%
!! AACCACTTTTCATGATTACA+GGG + chr1_3:7522052-7522071 Msa0101020:intron 30.0%
AAAATTGTTCCAGGATGTAA+TGG - chr1_3:7522188-7522207 None:intergenic 30.0%
AAAAATCTAGCGAGATTTGT+TGG + chr1_3:7522376-7522395 Msa0101020:intron 30.0%
GAATCACAATTTGATGTTGA+TGG + chr1_3:7522720-7522739 Msa0101020:intron 30.0%
GTAGAAGCAAGTTATTGTTA+AGG + chr1_3:7522782-7522801 Msa0101020:intron 30.0%
AAATAGGTTGTGTGAGAAAT+AGG + chr1_3:7522848-7522867 Msa0101020:intron 30.0%
!!! GTGAGAAATAGGTTTTGTTT+AGG + chr1_3:7522859-7522878 Msa0101020:intron 30.0%
! ATCATTCCCCAAAATGTTTT+GGG - chr1_3:7522947-7522966 None:intergenic 30.0%
! AATCATTCCCCAAAATGTTT+TGG - chr1_3:7522948-7522967 None:intergenic 30.0%
AATCACTTGACATGTTGAAA+TGG + chr1_3:7523073-7523092 Msa0101020:intron 30.0%
! TAATTCAGCTGATTTATCAG+AGG + chr1_3:7523226-7523245 Msa0101020:intron 30.0%
!! ATTTATCAGAGGTATTGTGT+TGG + chr1_3:7523237-7523256 Msa0101020:intron 30.0%
AAAACCAACAACAATTTGCA+GGG - chr1_3:7523449-7523468 None:intergenic 30.0%
AAAAACCAACAACAATTTGC+AGG - chr1_3:7523450-7523469 None:intergenic 30.0%
!!! TGCAAATTGTTGTTGGTTTT+TGG + chr1_3:7523449-7523468 Msa0101020:intron 30.0%
TCAGTTATACATTTGTACCA+AGG + chr1_3:7523702-7523721 Msa0101020:intron 30.0%
!! TTTATGTTCCTTTTGATTGC+AGG + chr1_3:7523758-7523777 Msa0101020:intron 30.0%
!! TTATGTTCCTTTTGATTGCA+GGG + chr1_3:7523759-7523778 Msa0101020:intron 30.0%
TCATTATGTCAACTATGTGA+TGG + chr1_3:7523791-7523810 Msa0101020:three_prime_UTR 30.0%
CATTATGTCAACTATGTGAT+GGG + chr1_3:7523792-7523811 Msa0101020:three_prime_UTR 30.0%
!! GATATCAGTTTTGTAGAGAT+TGG + chr1_3:7523838-7523857 Msa0101020:three_prime_UTR 30.0%
GATACTAGGATTAGAAAGAT+TGG + chr1_3:7523861-7523880 Msa0101020:three_prime_UTR 30.0%
!! AGTATTTGATTTGCCATTAG+AGG + chr1_3:7523888-7523907 Msa0101020:three_prime_UTR 30.0%
!! GTATTTGATTTGCCATTAGA+GGG + chr1_3:7523889-7523908 Msa0101020:three_prime_UTR 30.0%
!! TATTTGATTTGCCATTAGAG+GGG + chr1_3:7523890-7523909 Msa0101020:three_prime_UTR 30.0%
CAGTATATGATTCCATTTGT+TGG + chr1_3:7523946-7523965 Msa0101020:three_prime_UTR 30.0%
ATTACCTTCAAACCAACAAA+TGG - chr1_3:7523961-7523980 None:intergenic 30.0%
! TCTTTTATGTGAAGTCAACG+TGG - chr1_3:7519749-7519768 None:intergenic 35.0%
AGTTGTAATGATTCGTTGTG+TGG - chr1_3:7519807-7519826 None:intergenic 35.0%
! TTGTGACATGTTGATGAACA+TGG - chr1_3:7520085-7520104 None:intergenic 35.0%
!!! CTCCTTCGTTGTCTTTTTTT+TGG - chr1_3:7520140-7520159 None:intergenic 35.0%
!!! GTTTTTGGGTAAGAGTTTGA+GGG - chr1_3:7520184-7520203 None:intergenic 35.0%
! GCAACATCTATGTGGTTTTT+GGG - chr1_3:7520198-7520217 None:intergenic 35.0%
! TGCAACATCTATGTGGTTTT+TGG - chr1_3:7520199-7520218 None:intergenic 35.0%
GCCATGTGTTATATGCAATT+GGG + chr1_3:7520237-7520256 Msa0101020:CDS 35.0%
ACCCAATTGCATATAACACA+TGG - chr1_3:7520241-7520260 None:intergenic 35.0%
TGTTATATGCAATTGGGTCT+TGG + chr1_3:7520243-7520262 Msa0101020:CDS 35.0%
AGAAGAGCTTTACTATACCT+CGG - chr1_3:7520318-7520337 None:intergenic 35.0%
TCCAACGCAGTTGAATTATT+CGG - chr1_3:7520420-7520439 None:intergenic 35.0%
! TGGAGATTCTTGATAGTTTG+AGG + chr1_3:7520436-7520455 Msa0101020:CDS 35.0%
TAGTTTGAGGATTACTATGG+AGG + chr1_3:7520449-7520468 Msa0101020:CDS 35.0%
! AAGAAGAAGAAAGGGCATAA+AGG + chr1_3:7520576-7520595 Msa0101020:CDS 35.0%
AGATTCGAAGGATAAGGTTA+CGG + chr1_3:7520692-7520711 Msa0101020:CDS 35.0%
TAAGGTTACGGATAAGGATA+AGG + chr1_3:7520704-7520723 Msa0101020:CDS 35.0%
GGATAGTAACGAAGTTGTTA+AGG + chr1_3:7520725-7520744 Msa0101020:CDS 35.0%
!! AGGACTGTGAAGTTGATATA+TGG + chr1_3:7520765-7520784 Msa0101020:CDS 35.0%
!! TGTGAAGTTGATATATGGAG+AGG + chr1_3:7520770-7520789 Msa0101020:CDS 35.0%
GGTGAATTGTAGTATGAAGT+TGG + chr1_3:7520815-7520834 Msa0101020:CDS 35.0%
TTACTACTACTTCTGAGTTG+AGG + chr1_3:7520922-7520941 Msa0101020:CDS 35.0%
TAATAGGATGATTACTGTGG+AGG + chr1_3:7521094-7521113 Msa0101020:CDS 35.0%
AATCAGAATCAAACCCAACA+TGG - chr1_3:7521154-7521173 None:intergenic 35.0%
! GTTTGATTCTGATTCGTATC+TGG + chr1_3:7521160-7521179 Msa0101020:CDS 35.0%
TTCGTATCTGGATATTCATG+AGG + chr1_3:7521172-7521191 Msa0101020:CDS 35.0%
TATCTGGATATTCATGAGGT+TGG + chr1_3:7521176-7521195 Msa0101020:CDS 35.0%
ATCTGGATATTCATGAGGTT+GGG + chr1_3:7521177-7521196 Msa0101020:CDS 35.0%
GGTTGGGATGAAGATATATT+CGG + chr1_3:7521193-7521212 Msa0101020:CDS 35.0%
!! CTGCTTTGGCTTTGTTTAAT+TGG + chr1_3:7521294-7521313 Msa0101020:CDS 35.0%
!! GCTTTGGCTTTGTTTAATTG+GGG + chr1_3:7521296-7521315 Msa0101020:CDS 35.0%
!! CTTTGGCTTTGTTTAATTGG+GGG + chr1_3:7521297-7521316 Msa0101020:CDS 35.0%
! TTAGAGAAAATGGGTTTGCA+CGG + chr1_3:7521707-7521726 Msa0101020:CDS 35.0%
AACAGAACGCTCATACAATA+AGG - chr1_3:7521813-7521832 None:intergenic 35.0%
TCTGTTGTGGAATTTAAGCT+AGG + chr1_3:7521827-7521846 Msa0101020:CDS 35.0%
GTTGAAAAGTTTGAACTAGC+CGG + chr1_3:7521884-7521903 Msa0101020:CDS 35.0%
TCTAATGAAACAGCAATGGA+AGG + chr1_3:7521950-7521969 Msa0101020:CDS 35.0%
AACCCTGTAATCATGAAAAG+TGG - chr1_3:7522057-7522076 None:intergenic 35.0%
CATGGAATGAGATGTATGAT+GGG + chr1_3:7522100-7522119 Msa0101020:CDS 35.0%
!! TTTGGCTTGTCATTCTTTAG+AGG + chr1_3:7522214-7522233 Msa0101020:three_prime_UTR 35.0%
TTTAGAAGATCAACTGCCAT+AGG - chr1_3:7522349-7522368 None:intergenic 35.0%
ATTAACCAACAGGAAACACT+CGG - chr1_3:7522470-7522489 None:intergenic 35.0%
! GTGTTGTCTTTTCTGTTGTT+TGG + chr1_3:7522498-7522517 Msa0101020:intron 35.0%
! AGCGAAGATGGTAAAAGTTT+TGG + chr1_3:7522601-7522620 Msa0101020:intron 35.0%
!! TGCCTATGTTCTAGAATCTA+CGG + chr1_3:7522651-7522670 Msa0101020:intron 35.0%
!! AACCGTAGATTCTAGAACAT+AGG - chr1_3:7522656-7522675 None:intergenic 35.0%
!! TGTTCTAGAATCTACGGTTT+AGG + chr1_3:7522657-7522676 Msa0101020:intron 35.0%
AATGATATCAGCATGCTTAG+TGG + chr1_3:7522698-7522717 Msa0101020:intron 35.0%
TGAGTACAGTATATGATGTC+AGG + chr1_3:7522752-7522771 Msa0101020:intron 35.0%
!!! ATAGGTTTTGTTTAGGAGTC+AGG + chr1_3:7522866-7522885 Msa0101020:intron 35.0%
!!! TAGGTTTTGTTTAGGAGTCA+GGG + chr1_3:7522867-7522886 Msa0101020:intron 35.0%
! GGACTAATACCTTTTGGATT+AGG - chr1_3:7522919-7522938 None:intergenic 35.0%
GGAATGATTGACATTGTCAA+TGG + chr1_3:7522959-7522978 Msa0101020:intron 35.0%
AGAGACCAACAAGGAAAAAT+GGG + chr1_3:7523045-7523064 Msa0101020:intron 35.0%
!! TTTTGCCCATTTTTCCTTGT+TGG - chr1_3:7523053-7523072 None:intergenic 35.0%
AAACCAACAACAATTTGCAG+GGG - chr1_3:7523448-7523467 None:intergenic 35.0%
TTAAGTCGTCTTAAGCTAAC+TGG - chr1_3:7523502-7523521 None:intergenic 35.0%
TAACCAGACAATGAACATGT+AGG - chr1_3:7523546-7523565 None:intergenic 35.0%
CATTGTCTGGTTATACAAGA+TGG + chr1_3:7523553-7523572 Msa0101020:intron 35.0%
GATTTCATCAAAGTCATCCT+TGG - chr1_3:7523722-7523741 None:intergenic 35.0%
TTTGTAGAGATTGGGATACT+AGG + chr1_3:7523847-7523866 Msa0101020:three_prime_UTR 35.0%
!! ATTTGATTTGCCATTAGAGG+GGG + chr1_3:7523891-7523910 Msa0101020:three_prime_UTR 35.0%
!! GATTCCATTTGTTGGTTTGA+AGG + chr1_3:7523954-7523973 Msa0101020:three_prime_UTR 35.0%
TTATGTGAAGTCAACGTGGA+TGG - chr1_3:7519745-7519764 None:intergenic 40.0%
GAAACCAGCTGGAAAAAAGA+AGG + chr1_3:7519984-7520003 Msa0101020:CDS 40.0%
!!! TGTTCCTTCTTTTTTCCAGC+TGG - chr1_3:7519991-7520010 None:intergenic 40.0%
!!! GGTTTTTGGGTAAGAGTTTG+AGG - chr1_3:7520185-7520204 None:intergenic 40.0%
GAAGATGTGCAACATCTATG+TGG - chr1_3:7520206-7520225 None:intergenic 40.0%
CATATAACACATGGCCATGT+TGG - chr1_3:7520232-7520251 None:intergenic 40.0%
GGCCATGTGTTATATGCAAT+TGG + chr1_3:7520236-7520255 Msa0101020:CDS 40.0%
AGGATTACTATGGAGGAGAA+AGG + chr1_3:7520456-7520475 Msa0101020:CDS 40.0%
GGATTACTATGGAGGAGAAA+GGG + chr1_3:7520457-7520476 Msa0101020:CDS 40.0%
TGATGAGACTGAGATTGCTT+TGG + chr1_3:7520488-7520507 Msa0101020:CDS 40.0%
GCGGTTTAGGAAAGTTGTTA+GGG + chr1_3:7520542-7520561 Msa0101020:CDS 40.0%
! AAGAAAGGGCATAAAGGAGA+AGG + chr1_3:7520582-7520601 Msa0101020:CDS 40.0%
GAAGGATAAGGTTACGGATA+AGG + chr1_3:7520698-7520717 Msa0101020:CDS 40.0%
AGGAAGATAAAGCGGTTACT+AGG + chr1_3:7520745-7520764 Msa0101020:CDS 40.0%
!! AGTTGGTGAGAGATGTGATA+AGG + chr1_3:7520832-7520851 Msa0101020:CDS 40.0%
! GTTGGTGAGAGATGTGATAA+GGG + chr1_3:7520833-7520852 Msa0101020:CDS 40.0%
TGAGAGATGTGATAAGGGAT+AGG + chr1_3:7520838-7520857 Msa0101020:CDS 40.0%
TGTGATAAGGGATAGGTATC+CGG + chr1_3:7520845-7520864 Msa0101020:CDS 40.0%
GGGTGTTCTTGTGAAGTATA+AGG + chr1_3:7520875-7520894 Msa0101020:CDS 40.0%
GTGAAGTATAAGGATAGGGA+AGG + chr1_3:7520885-7520904 Msa0101020:CDS 40.0%
TAAGGATAGGGAAGGTGATT+TGG + chr1_3:7520893-7520912 Msa0101020:CDS 40.0%
! GTATATTACGCAGGTGGATT+TGG + chr1_3:7520983-7521002 Msa0101020:CDS 40.0%
TGAAAAGATGAGTAGTGGTG+AGG + chr1_3:7521025-7521044 Msa0101020:CDS 40.0%
GGCTAATAGGATGATTACTG+TGG + chr1_3:7521091-7521110 Msa0101020:CDS 40.0%
AGGCTGTTTAAGAACCATGT+TGG + chr1_3:7521137-7521156 Msa0101020:CDS 40.0%
GGCTGTTTAAGAACCATGTT+GGG + chr1_3:7521138-7521157 Msa0101020:CDS 40.0%
TGGGATGAAGATATATTCGG+AGG + chr1_3:7521196-7521215 Msa0101020:CDS 40.0%
AGAGCTGTTTGATATTGCTG+CGG + chr1_3:7521253-7521272 Msa0101020:CDS 40.0%
TGCGGATAAGTTTCAAGAGA+TGG + chr1_3:7521271-7521290 Msa0101020:CDS 40.0%
TGGAAAAAGGGATGTTGATG+TGG + chr1_3:7521624-7521643 Msa0101020:CDS 40.0%
GGAAAAAGGGATGTTGATGT+GGG + chr1_3:7521625-7521644 Msa0101020:CDS 40.0%
ATTGAGGAACAGCGTTTGAA+TGG + chr1_3:7521653-7521672 Msa0101020:CDS 40.0%
! TTCTGAAGAAGCTGAAGATC+AGG + chr1_3:7521748-7521767 Msa0101020:CDS 40.0%
AAGATCAGGCTTCAAAGATG+AGG + chr1_3:7521762-7521781 Msa0101020:CDS 40.0%
! ACAATAAGGTGCCCCATAAA+AGG - chr1_3:7521799-7521818 None:intergenic 40.0%
ATTGTATGAGCGTTCTGTTG+TGG + chr1_3:7521814-7521833 Msa0101020:CDS 40.0%
TTAAGCTAGGACTACCAACA+TGG + chr1_3:7521840-7521859 Msa0101020:CDS 40.0%
TAAGCTAGGACTACCAACAT+GGG + chr1_3:7521841-7521860 Msa0101020:CDS 40.0%
AATGTCAGTTGTAGAAGCTC+CGG - chr1_3:7521906-7521925 None:intergenic 40.0%
TGAAACAGCAATGGAAGGTA+CGG + chr1_3:7521955-7521974 Msa0101020:intron 40.0%
GCATGGAATGAGATGTATGA+TGG + chr1_3:7522099-7522118 Msa0101020:CDS 40.0%
AAGGCTTGCATTCCATTCAA+AGG + chr1_3:7522275-7522294 Msa0101020:three_prime_UTR 40.0%
GCAGAAAGAACTGTAGTACA+AGG - chr1_3:7522321-7522340 None:intergenic 40.0%
ATATACCGAGTGTTTCCTGT+TGG + chr1_3:7522462-7522481 Msa0101020:intron 40.0%
! TCCTGTTGGTTAATCACAAC+TGG + chr1_3:7522476-7522495 Msa0101020:intron 40.0%
ACCAGTTGTGATTAACCAAC+AGG - chr1_3:7522480-7522499 None:intergenic 40.0%
TAGTAACCAACTAGCGAAGA+TGG + chr1_3:7522589-7522608 Msa0101020:intron 40.0%
! CTTTTACCATCTTCGCTAGT+TGG - chr1_3:7522598-7522617 None:intergenic 40.0%
GTACAGTATATGATGTCAGG+TGG + chr1_3:7522755-7522774 Msa0101020:intron 40.0%
TCTGTCTGTATTCTCAGCTA+GGG + chr1_3:7522825-7522844 Msa0101020:intron 40.0%
GTATTCTCAGCTAGGGAAAT+AGG + chr1_3:7522832-7522851 Msa0101020:intron 40.0%
TGCTTCTCACCTAATCCAAA+AGG + chr1_3:7522907-7522926 Msa0101020:intron 40.0%
CAGAGACCAACAAGGAAAAA+TGG + chr1_3:7523044-7523063 Msa0101020:intron 40.0%
! GATAGTTTGCATGTGGTCAT+AGG + chr1_3:7523278-7523297 Msa0101020:intron 40.0%
!! TGCTGTTTCATAATGGTCAC+CGG + chr1_3:7523405-7523424 Msa0101020:intron 40.0%
GGACACGTCAAAAAAAAAGC+CGG - chr1_3:7523427-7523446 None:intergenic 40.0%
!!! TGTTGTTGGTTTTTGGCGTT+AGG + chr1_3:7523456-7523475 Msa0101020:intron 40.0%
!!! GTTGTTGGTTTTTGGCGTTA+GGG + chr1_3:7523457-7523476 Msa0101020:intron 40.0%
!!! TTGTTGGTTTTTGGCGTTAG+GGG + chr1_3:7523458-7523477 Msa0101020:intron 40.0%
GTCTGGTTATACAAGATGGA+TGG + chr1_3:7523557-7523576 Msa0101020:intron 40.0%
!! TTCCTTTTGATTGCAGGGAT+TGG + chr1_3:7523764-7523783 Msa0101020:intron 40.0%
AACCAATCCCTGCAATCAAA+AGG - chr1_3:7523769-7523788 None:intergenic 40.0%
!! TTTGATTTGCCATTAGAGGG+GGG + chr1_3:7523892-7523911 Msa0101020:three_prime_UTR 40.0%
TGCAGTGTGCTATACAATAC+CGG - chr1_3:7524090-7524109 None:intergenic 40.0%
TGAAGTCAACGTGGATGGAT+TGG - chr1_3:7519740-7519759 None:intergenic 45.0%
TGGCTGTTGTGTGTAGGTTA+GGG - chr1_3:7519787-7519806 None:intergenic 45.0%
TGCACATCTTCACACCAACA+TGG + chr1_3:7520215-7520234 Msa0101020:CDS 45.0%
TAGAAGAGCCAAGTGTTACG+AGG + chr1_3:7520338-7520357 Msa0101020:CDS 45.0%
ATTCAACGCCTCGTAACACT+TGG - chr1_3:7520349-7520368 None:intergenic 45.0%
!! AGTGTTACGAGGCGTTGAAT+CGG + chr1_3:7520349-7520368 Msa0101020:CDS 45.0%
GCCGAATAATTCAACTGCGT+TGG + chr1_3:7520416-7520435 Msa0101020:CDS 45.0%
CGCGGTTTAGGAAAGTTGTT+AGG + chr1_3:7520541-7520560 Msa0101020:CDS 45.0%
GAGAAGAAAGCCACCAATGT+TGG + chr1_3:7520636-7520655 Msa0101020:CDS 45.0%
GGGTGAAGATTCGAAGGATA+AGG + chr1_3:7520686-7520705 Msa0101020:CDS 45.0%
GTGATAAGGGATAGGTATCC+GGG + chr1_3:7520846-7520865 Msa0101020:CDS 45.0%
TGATAAGGGATAGGTATCCG+GGG + chr1_3:7520847-7520866 Msa0101020:CDS 45.0%
GATAGGTATCCGGGGTTAAA+GGG + chr1_3:7520855-7520874 Msa0101020:CDS 45.0%
ACAAGAACACCCTTTAACCC+CGG - chr1_3:7520867-7520886 None:intergenic 45.0%
! TTCTGAGTTGAGGTTAGCTG+AGG + chr1_3:7520932-7520951 Msa0101020:CDS 45.0%
! TCTGAGTTGAGGTTAGCTGA+GGG + chr1_3:7520933-7520952 Msa0101020:CDS 45.0%
! TACGCAGGTGGATTTGGATA+TGG + chr1_3:7520989-7521008 Msa0101020:CDS 45.0%
!! GAGAAGGAGATAAGGGTGTT+GGG + chr1_3:7521069-7521088 Msa0101020:CDS 45.0%
!! AGAAGGAGATAAGGGTGTTG+GGG + chr1_3:7521070-7521089 Msa0101020:CDS 45.0%
!! ATAAGGGTGTTGGGGCTAAT+AGG + chr1_3:7521078-7521097 Msa0101020:CDS 45.0%
GGATGATTACTGTGGAGGAA+TGG + chr1_3:7521099-7521118 Msa0101020:CDS 45.0%
!! AATGGCTTGTTCAGTTTGCG+AGG + chr1_3:7521117-7521136 Msa0101020:CDS 45.0%
GAAGATATATTCGGAGGCGA+TGG + chr1_3:7521202-7521221 Msa0101020:CDS 45.0%
GAGGATTCAGTGACGAATGA+TGG + chr1_3:7521224-7521243 Msa0101020:CDS 45.0%
GTTTCAAGAGATGGCTGCTT+TGG + chr1_3:7521280-7521299 Msa0101020:CDS 45.0%
GGGGAATGTTCACTTGTCTA+AGG + chr1_3:7521316-7521335 Msa0101020:CDS 45.0%
! ATGTTCACTTGTCTAAGGCG+AGG + chr1_3:7521321-7521340 Msa0101020:CDS 45.0%
TCTCTCGAGCATGTTAAAGC+TGG + chr1_3:7521383-7521402 Msa0101020:CDS 45.0%
!! TGGATATGAATGGGCTACGA+AGG + chr1_3:7521403-7521422 Msa0101020:CDS 45.0%
! ATGGGCTACGAAGGAGTATA+AGG + chr1_3:7521412-7521431 Msa0101020:CDS 45.0%
AATCAAACCGGACTTCTACG+AGG + chr1_3:7521466-7521485 Msa0101020:CDS 45.0%
ATCAAACCGGACTTCTACGA+GGG + chr1_3:7521467-7521486 Msa0101020:CDS 45.0%
ACTGTTGATACCCAAGAGCT+AGG - chr1_3:7521496-7521515 None:intergenic 45.0%
TTGAGCAAGCAAAGCTATGC+TGG + chr1_3:7521516-7521535 Msa0101020:CDS 45.0%
! TATCGAAGTTGGCCCTTTTG+AGG + chr1_3:7521565-7521584 Msa0101020:CDS 45.0%
GGTTCTGCAGCTCTATAACA+AGG + chr1_3:7521589-7521608 Msa0101020:CDS 45.0%
CAGAGGACAGCATGGAAAAA+GGG + chr1_3:7521612-7521631 Msa0101020:CDS 45.0%
AAAAGGGATGTTGATGTGGG+AGG + chr1_3:7521628-7521647 Msa0101020:CDS 45.0%
ACCAACATGGGAGGAATGTT+TGG + chr1_3:7521853-7521872 Msa0101020:CDS 45.0%
TCCAAACATTCCTCCCATGT+TGG - chr1_3:7521857-7521876 None:intergenic 45.0%
AACATGGGAGGAATGTTTGG+AGG + chr1_3:7521856-7521875 Msa0101020:CDS 45.0%
GGAGCTTCTACAACTGACAT+TGG + chr1_3:7521905-7521924 Msa0101020:CDS 45.0%
! GAAACAGCAATGGAAGGTAC+GGG + chr1_3:7521956-7521975 Msa0101020:intron 45.0%
TCGATGACATAGTGCAAGCA+TGG + chr1_3:7522082-7522101 Msa0101020:CDS 45.0%
! GGAATGAGATGTATGATGGG+TGG + chr1_3:7522103-7522122 Msa0101020:CDS 45.0%
AATGGTTCGAGTCGGAAAGT+TGG - chr1_3:7522141-7522160 None:intergenic 45.0%
GACGAAACAATGGTTCGAGT+CGG - chr1_3:7522149-7522168 None:intergenic 45.0%
GACTCGAACCATTGTTTCGT+CGG + chr1_3:7522148-7522167 Msa0101020:CDS 45.0%
TCCAAGACTCCATTACATCC+TGG + chr1_3:7522176-7522195 Msa0101020:CDS 45.0%
! TCCAGGATGTAATGGAGTCT+TGG - chr1_3:7522180-7522199 None:intergenic 45.0%
CTTGCATTCCATTCAAAGGC+AGG + chr1_3:7522279-7522298 Msa0101020:three_prime_UTR 45.0%
CTTACTCACCTGCCTTTGAA+TGG - chr1_3:7522290-7522309 None:intergenic 45.0%
GTTCTTTCTGCACGTTCCTA+TGG + chr1_3:7522330-7522349 Msa0101020:intron 45.0%
CTCTGTCTGTATTCTCAGCT+AGG + chr1_3:7522824-7522843 Msa0101020:intron 45.0%
! GCAGCAGGACTAATACCTTT+TGG - chr1_3:7522925-7522944 None:intergenic 45.0%
! TCCTGCTGCCCAAAACATTT+TGG + chr1_3:7522936-7522955 Msa0101020:intron 45.0%
! CCTGCTGCCCAAAACATTTT+GGG + chr1_3:7522937-7522956 Msa0101020:intron 45.0%
! CTGCTGCCCAAAACATTTTG+GGG + chr1_3:7522938-7522957 Msa0101020:intron 45.0%
! GGGTTTGGATAGTTTGCATG+TGG + chr1_3:7523271-7523290 Msa0101020:intron 45.0%
TGTCCCCTGCAAATTGTTGT+TGG + chr1_3:7523442-7523461 Msa0101020:intron 45.0%
ACGCCTACATGTTCATTGTC+TGG + chr1_3:7523540-7523559 Msa0101020:intron 45.0%
!! TTGATTTGCCATTAGAGGGG+GGG + chr1_3:7523893-7523912 Msa0101020:three_prime_UTR 45.0%
AACATATACCCCCCCTCTAA+TGG - chr1_3:7523904-7523923 None:intergenic 45.0%
!! GTCAACGTGGATGGATTGGA+GGG - chr1_3:7519736-7519755 None:intergenic 50.0%
!! AGTCAACGTGGATGGATTGG+AGG - chr1_3:7519737-7519756 None:intergenic 50.0%
GTGGCTGTTGTGTGTAGGTT+AGG - chr1_3:7519788-7519807 None:intergenic 50.0%
GTTGTGTGGCTGTTGTGTGT+AGG - chr1_3:7519793-7519812 None:intergenic 50.0%
TGCACTCGTTAATCGCTCGA+GGG - chr1_3:7520275-7520294 None:intergenic 50.0%
TTGCACTCGTTAATCGCTCG+AGG - chr1_3:7520276-7520295 None:intergenic 50.0%
!! TTACGAGGCGTTGAATCGGT+TGG + chr1_3:7520353-7520372 Msa0101020:CDS 50.0%
! GGCGTTGAATCGGTTGGATT+TGG + chr1_3:7520359-7520378 Msa0101020:CDS 50.0%
GGTGAAGGGTGAAGATTCGA+AGG + chr1_3:7520680-7520699 Msa0101020:CDS 50.0%
TATTAGATGGGCGCAGTTGC+CGG + chr1_3:7520794-7520813 Msa0101020:CDS 50.0%
GGATAGGTATCCGGGGTTAA+AGG + chr1_3:7520854-7520873 Msa0101020:CDS 50.0%
! GTCATGTGCTTGGTTCGATC+CGG + chr1_3:7520958-7520977 Msa0101020:CDS 50.0%
GATCCGGCTGTATATTACGC+AGG + chr1_3:7520974-7520993 Msa0101020:CDS 50.0%
CCACCTGCGTAATATACAGC+CGG - chr1_3:7520980-7520999 None:intergenic 50.0%
ATGAGTAGTGGTGAGGTGAG+AGG + chr1_3:7521032-7521051 Msa0101020:CDS 50.0%
TGAGTAGTGGTGAGGTGAGA+GGG + chr1_3:7521033-7521052 Msa0101020:CDS 50.0%
TGGGGTTGGAGAAGGAGATA+AGG + chr1_3:7521061-7521080 Msa0101020:CDS 50.0%
GGGGTTGGAGAAGGAGATAA+GGG + chr1_3:7521062-7521081 Msa0101020:CDS 50.0%
! GGAGAAGGAGATAAGGGTGT+TGG + chr1_3:7521068-7521087 Msa0101020:CDS 50.0%
GATATATTCGGAGGCGATGG+AGG + chr1_3:7521205-7521224 Msa0101020:CDS 50.0%
! TTCACTTGTCTAAGGCGAGG+AGG + chr1_3:7521324-7521343 Msa0101020:CDS 50.0%
!! CGAGTGCCTTTTCAGGAAGA+CGG + chr1_3:7521347-7521366 Msa0101020:CDS 50.0%
!! GAGTGCCTTTTCAGGAAGAC+GGG + chr1_3:7521348-7521367 Msa0101020:CDS 50.0%
GCTGCAGAACCTCCTCAAAA+GGG - chr1_3:7521580-7521599 None:intergenic 50.0%
AGCTGCAGAACCTCCTCAAA+AGG - chr1_3:7521581-7521600 None:intergenic 50.0%
GCAGCTCTATAACAAGGCAG+AGG + chr1_3:7521595-7521614 Msa0101020:CDS 50.0%
TAACAAGGCAGAGGACAGCA+TGG + chr1_3:7521604-7521623 Msa0101020:CDS 50.0%
GCAGAGGACAGCATGGAAAA+AGG + chr1_3:7521611-7521630 Msa0101020:CDS 50.0%
GTTGATGTGGGAGGAGATTG+AGG + chr1_3:7521637-7521656 Msa0101020:CDS 50.0%
! TGGGTTTGCACGGTCTTTTC+AGG + chr1_3:7521717-7521736 Msa0101020:CDS 50.0%
! GGGTTTGCACGGTCTTTTCA+GGG + chr1_3:7521718-7521737 Msa0101020:CDS 50.0%
!! CCCAAAATGTTTTGGGCAGC+AGG - chr1_3:7522940-7522959 None:intergenic 50.0%
TGAAATGGCACCGCAAAGCT+TGG + chr1_3:7523088-7523107 Msa0101020:intron 50.0%
CAACCAAGCACCAAGCTTTG+CGG - chr1_3:7523101-7523120 None:intergenic 50.0%
!! GAGGTATTGTGTTGGCCACT+AGG + chr1_3:7523245-7523264 Msa0101020:intron 50.0%
! ATTGTGTTGGCCACTAGGAC+TGG + chr1_3:7523250-7523269 Msa0101020:intron 50.0%
! TTGTGTTGGCCACTAGGACT+GGG + chr1_3:7523251-7523270 Msa0101020:intron 50.0%
CTATCCAAACCCAGTCCTAG+TGG - chr1_3:7523263-7523282 None:intergenic 50.0%
! AGGGGGGGTATATGTTCTGA+TGG + chr1_3:7523908-7523927 Msa0101020:three_prime_UTR 50.0%
AGATCGATGGGGAAACCAGC+TGG + chr1_3:7519973-7519992 Msa0101020:exon 55.0%
TTGCTCTGCAAGTTTCGCCG+AGG + chr1_3:7520298-7520317 Msa0101020:CDS 55.0%
ACTTTCCTAAACCGCGCAGC+AGG - chr1_3:7520537-7520556 None:intergenic 55.0%
AGGGCATAAAGGAGAAGGCG+AGG + chr1_3:7520587-7520606 Msa0101020:CDS 55.0%
AAGGAGAAGGCGAGGAAGAG+CGG + chr1_3:7520595-7520614 Msa0101020:CDS 55.0%
GCTGAGGGTTGTCATGTGCT+TGG + chr1_3:7520948-7520967 Msa0101020:CDS 55.0%
CCGGCTGTATATTACGCAGG+TGG + chr1_3:7520977-7520996 Msa0101020:CDS 55.0%
GAGTAGTGGTGAGGTGAGAG+GGG + chr1_3:7521034-7521053 Msa0101020:CDS 55.0%
GTGAGGTGAGAGGGGAGAAT+GGG + chr1_3:7521042-7521061 Msa0101020:CDS 55.0%
TGAGGTGAGAGGGGAGAATG+GGG + chr1_3:7521043-7521062 Msa0101020:CDS 55.0%
CTCGACCCGTCTTCCTGAAA+AGG - chr1_3:7521356-7521375 None:intergenic 55.0%
AGGAGTCCCTCGTAGAAGTC+CGG - chr1_3:7521476-7521495 None:intergenic 55.0%
! TACGAGGGACTCCTAGCTCT+TGG + chr1_3:7521482-7521501 Msa0101020:CDS 55.0%
! ACGAGGGACTCCTAGCTCTT+GGG + chr1_3:7521483-7521502 Msa0101020:CDS 55.0%
!! CGAAGTTGGCCCTTTTGAGG+AGG + chr1_3:7521568-7521587 Msa0101020:CDS 55.0%
GCTAGGACTACCAACATGGG+AGG + chr1_3:7521844-7521863 Msa0101020:CDS 55.0%
GGAACACGCCGACGAAACAA+TGG - chr1_3:7522159-7522178 None:intergenic 55.0%
TTGGTCTCTGCTGTGCTCTG+TGG - chr1_3:7523034-7523053 None:intergenic 55.0%
GAGCACAGCAGAGACCAACA+AGG + chr1_3:7523036-7523055 Msa0101020:intron 55.0%
!! CGCAAAGCTTGGTGCTTGGT+TGG + chr1_3:7523099-7523118 Msa0101020:intron 55.0%
TTGGCCACTAGGACTGGGTT+TGG + chr1_3:7523256-7523275 Msa0101020:intron 55.0%
TTCCTAAACCGCGCAGCAGG+CGG - chr1_3:7520534-7520553 None:intergenic 60.0%
GGTGAGGTGAGAGGGGAGAA+TGG + chr1_3:7521041-7521060 Msa0101020:CDS 60.0%
GTGAGAGGGGAGAATGGGGT+TGG + chr1_3:7521047-7521066 Msa0101020:CDS 60.0%
GGGGAGAATGGGGTTGGAGA+AGG + chr1_3:7521053-7521072 Msa0101020:CDS 60.0%
! GAGGAGGCGAGTGCCTTTTC+AGG + chr1_3:7521340-7521359 Msa0101020:CDS 60.0%
!! GCACCGCAAAGCTTGGTGCT+TGG + chr1_3:7523095-7523114 Msa0101020:intron 60.0%
AAGTAGAGCCGCCTGCTGCG+CGG + chr1_3:7520523-7520542 Msa0101020:CDS 65.0%
AGCCGCCTGCTGCGCGGTTT+AGG + chr1_3:7520529-7520548 Msa0101020:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7519727 7524131 7519727 ID=Msa0101020;Name=Msa0101020
chr1_3 mRNA 7519727 7524131 7519727 ID=Msa0101020-mRNA-1;Parent=Msa0101020;Name=Msa0101020-mRNA-1;_AED=0.01;_eAED=0.01;_QI=252|1|1|1|0.5|0.33|3|443|709
chr1_3 exon 7519727 7521971 7519727 ID=Msa0101020-mRNA-1:exon:2954;Parent=Msa0101020-mRNA-1
chr1_3 exon 7522073 7522300 7522073 ID=Msa0101020-mRNA-1:exon:2955;Parent=Msa0101020-mRNA-1
chr1_3 exon 7523780 7524131 7523780 ID=Msa0101020-mRNA-1:exon:2956;Parent=Msa0101020-mRNA-1
chr1_3 five_prime_UTR 7519727 7519978 7519727 ID=Msa0101020-mRNA-1:five_prime_utr;Parent=Msa0101020-mRNA-1
chr1_3 CDS 7519979 7521971 7519979 ID=Msa0101020-mRNA-1:cds;Parent=Msa0101020-mRNA-1
chr1_3 CDS 7522073 7522209 7522073 ID=Msa0101020-mRNA-1:cds;Parent=Msa0101020-mRNA-1
chr1_3 three_prime_UTR 7522210 7522300 7522210 ID=Msa0101020-mRNA-1:three_prime_utr;Parent=Msa0101020-mRNA-1
chr1_3 three_prime_UTR 7523780 7524131 7523780 ID=Msa0101020-mRNA-1:three_prime_utr;Parent=Msa0101020-mRNA-1
Gene Sequence

>Msa0101020

ATGGGGAAACCAGCTGGAAAAAAGAAGGAACATGAATCACCAAAATCAAACAACAACAAGAACAAAGGTTACGAACGTTCAACATCATTCGACGATGACACAGCCATGTTCATCAACATGTCACAAGAATTAAGAGAAGAAGGTAACAAACTTTTCTTCCAAAAAAAAGACAACGAAGGAGCTATGTTAAAGTACGAAAAAGCCCTCAAACTCTTACCCAAAAACCACATAGATGTTGCACATCTTCACACCAACATGGCCATGTGTTATATGCAATTGGGTCTTGGCGAATACCCTCGAGCGATTAACGAGTGCAATCTTGCTCTGCAAGTTTCGCCGAGGTATAGTAAAGCTCTTCTTAGAAGAGCCAAGTGTTACGAGGCGTTGAATCGGTTGGATTTGGCTATGAGAGATGTTAGAGTTGTTTTGAATGCTGAGCCGAATAATTCAACTGCGTTGGAGATTCTTGATAGTTTGAGGATTACTATGGAGGAGAAAGGGATTACTATTGATGAGACTGAGATTGCTTTGGCTGCTATTCAGCAAGTAGAGCCGCCTGCTGCGCGGTTTAGGAAAGTTGTTAGGGAGAAGATTAATAAGAAGAAGAAAGGGCATAAAGGAGAAGGCGAGGAAGAGCGGAAAAGTAAGAGTGTTGTTGAGAAGAAAGCCACCAATGTTGGAAATGTTAATGTTAATGTTAAGGTGAAGGGTGAAGATTCGAAGGATAAGGTTACGGATAAGGATAAGGATAGTAACGAAGTTGTTAAGGAAGATAAAGCGGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGATGGGCGCAGTTGCCGGTGAATTGTAGTATGAAGTTGGTGAGAGATGTGATAAGGGATAGGTATCCGGGGTTAAAGGGTGTTCTTGTGAAGTATAAGGATAGGGAAGGTGATTTGGTTACTATTACTACTACTTCTGAGTTGAGGTTAGCTGAGGGTTGTCATGTGCTTGGTTCGATCCGGCTGTATATTACGCAGGTGGATTTGGATATGGAGCCGTGTTATGATGAAAAGATGAGTAGTGGTGAGGTGAGAGGGGAGAATGGGGTTGGAGAAGGAGATAAGGGTGTTGGGGCTAATAGGATGATTACTGTGGAGGAATGGCTTGTTCAGTTTGCGAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTATCTGGATATTCATGAGGTTGGGATGAAGATATATTCGGAGGCGATGGAGGATTCAGTGACGAATGATGGTGCTCAAGAGCTGTTTGATATTGCTGCGGATAAGTTTCAAGAGATGGCTGCTTTGGCTTTGTTTAATTGGGGGAATGTTCACTTGTCTAAGGCGAGGAGGCGAGTGCCTTTTCAGGAAGACGGGTCGAGAGAAGCATCTCTCGAGCATGTTAAAGCTGGATATGAATGGGCTACGAAGGAGTATAAGGAAGCAGAAATGAGATACGAAGAATCTGTGAAAATCAAACCGGACTTCTACGAGGGACTCCTAGCTCTTGGGTATCAACAGTTTGAGCAAGCAAAGCTATGCTGGTGTTATTTAATTGTAAACAATAAGAATATCGAAGTTGGCCCTTTTGAGGAGGTTCTGCAGCTCTATAACAAGGCAGAGGACAGCATGGAAAAAGGGATGTTGATGTGGGAGGAGATTGAGGAACAGCGTTTGAATGGACTCTCTAAGTTAGATAAATATAATGCACAGTTAGAGAAAATGGGTTTGCACGGTCTTTTCAGGGATGTTTCTTCTGAAGAAGCTGAAGATCAGGCTTCAAAGATGAGGATACAGATATACCTTTTATGGGGCACCTTATTGTATGAGCGTTCTGTTGTGGAATTTAAGCTAGGACTACCAACATGGGAGGAATGTTTGGAGGTTGCTGTTGAAAAGTTTGAACTAGCCGGAGCTTCTACAACTGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCAATGGAAGGGTTCAAAATCGATGACATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCAACTTTCCGACTCGAACCATTGTTTCGTCGGCGTGTTCCAAGACTCCATTACATCCTGGAACAATTTTAA
Protein sequence

>Msa0101020

MGKPAGKKKEHESPKSNNNKNKGYERSTSFDDDTAMFINMSQELREEGNKLFFQKKDNEGAMLKYEKALKLLPKNHIDVAHLHTNMAMCYMQLGLGEYPRAINECNLALQVSPRYSKALLRRAKCYEALNRLDLAMRDVRVVLNAEPNNSTALEILDSLRITMEEKGITIDETEIALAAIQQVEPPAARFRKVVREKINKKKKGHKGEGEEERKSKSVVEKKATNVGNVNVNVKVKGEDSKDKVTDKDKDSNEVVKEDKAVTRTVKLIYGEDIRWAQLPVNCSMKLVRDVIRDRYPGLKGVLVKYKDREGDLVTITTTSELRLAEGCHVLGSIRLYITQVDLDMEPCYDEKMSSGEVRGENGVGEGDKGVGANRMITVEEWLVQFARLFKNHVGFDSDSYLDIHEVGMKIYSEAMEDSVTNDGAQELFDIAADKFQEMAALALFNWGNVHLSKARRRVPFQEDGSREASLEHVKAGYEWATKEYKEAEMRYEESVKIKPDFYEGLLALGYQQFEQAKLCWCYLIVNNKNIEVGPFEEVLQLYNKAEDSMEKGMLMWEEIEEQRLNGLSKLDKYNAQLEKMGLHGLFRDVSSEEAEDQASKMRIQIYLLWGTLLYERSVVEFKLGLPTWEECLEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDDIVQAWNEMYDGWQFDVPTFRLEPLFRRRVPRLHYILEQF*