AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0820890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0820890 MtrunA17_Chr3g0121481 88.220 382 42 1 56 437 317 695 0.0 718
Msa0820890 MtrunA17_Chr5g0441041 93.979 382 23 0 56 437 420 801 0.0 711
Msa0820890 MtrunA17_Chr5g0441061 89.683 378 39 0 56 433 420 797 0.0 711
Msa0820890 MtrunA17_Chr5g0441051 87.792 385 44 1 56 437 420 804 0.0 699
Msa0820890 MtrunA17_Chr6g0455471 56.757 370 142 7 62 426 431 787 5.84e-135 406
Msa0820890 MtrunA17_Chr8g0378261 55.703 377 146 8 56 425 428 790 1.00e-133 403
Msa0820890 MtrunA17_Chr5g0441281 47.215 377 186 6 55 426 434 802 1.18e-116 359
Msa0820890 MtrunA17_Chr7g0234531 46.950 377 187 7 55 426 241 609 7.43e-116 352
Msa0820890 MtrunA17_Chr5g0441291 47.733 375 183 7 57 426 451 817 2.09e-114 354
Msa0820890 MtrunA17_Chr7g0234551 46.950 377 187 7 55 426 434 802 2.03e-113 351
Msa0820890 MtrunA17_Chr7g0234521 46.950 377 187 7 55 426 434 802 6.42e-113 350
Msa0820890 MtrunA17_Chr7g0234431 46.419 377 189 6 55 426 391 759 6.88e-113 348
Msa0820890 MtrunA17_Chr3g0131701 46.851 397 186 8 36 420 405 788 4.93e-108 337
Msa0820890 MtrunA17_Chr6g0470261 40.000 375 209 8 64 430 392 758 2.61e-87 281
Msa0820890 MtrunA17_Chr2g0280951 33.582 402 235 9 49 428 399 790 2.01e-63 219
Msa0820890 MtrunA17_Chr5g0432141 31.429 420 271 8 14 425 372 782 1.58e-61 213
Msa0820890 MtrunA17_Chr3g0130301 32.127 442 264 10 15 427 358 792 1.01e-60 211
Msa0820890 MtrunA17_Chr3g0114261 34.293 382 220 11 57 425 403 766 1.94e-60 210
Msa0820890 MtrunA17_Chr8g0384341 30.474 443 267 9 15 424 356 790 1.42e-58 205
Msa0820890 MtrunA17_Chr5g0432121 32.812 384 242 9 50 425 326 701 3.90e-58 203
Msa0820890 MtrunA17_Chr3g0106451 32.055 365 228 10 68 425 5 356 7.14e-58 194
Msa0820890 MtrunA17_Chr5g0432131 32.642 386 240 10 50 425 293 668 2.26e-56 197
Msa0820890 MtrunA17_Chr3g0106471 33.156 377 231 8 56 426 419 780 4.75e-53 189
Msa0820890 MtrunA17_Chr5g0432151 33.067 375 234 10 59 425 413 778 1.44e-51 186
Msa0820890 MtrunA17_Chr3g0106371 31.616 427 264 10 15 428 508 919 1.69e-49 180
Msa0820890 MtrunA17_Chr4g0019401 29.659 381 242 10 65 425 10 384 1.97e-44 159
Msa0820890 MtrunA17_Chr5g0437801 34.343 297 183 7 134 425 10 299 6.17e-43 154
Msa0820890 MtrunA17_Chr8g0378241 51.049 143 62 3 288 425 1 140 4.89e-39 137
Msa0820890 MtrunA17_Chr3g0089271 30.079 379 228 10 73 425 398 765 1.46e-38 148
Msa0820890 MtrunA17_Chr7g0234491 47.222 144 70 3 288 426 1 143 1.05e-37 134
Msa0820890 MtrunA17_Chr2g0299741 27.907 430 257 11 37 424 391 809 1.21e-37 145
Msa0820890 MtrunA17_Chr3g0140801 28.429 401 251 10 55 425 381 775 3.23e-36 141
Msa0820890 MtrunA17_Chr3g0114191 26.650 409 251 13 58 430 455 850 3.66e-36 141
Msa0820890 MtrunA17_Chr8g0350601 25.688 436 276 12 24 424 274 696 4.54e-35 138
Msa0820890 MtrunA17_Chr3g0091581 27.586 435 269 14 24 424 364 786 1.70e-34 136
Msa0820890 MtrunA17_Chr1g0168791 26.667 405 254 10 56 426 333 728 1.87e-34 136
Msa0820890 MtrunA17_Chr1g0167801 26.667 405 254 10 56 426 333 728 2.91e-34 135
Msa0820890 MtrunA17_Chr5g0397041 27.765 425 279 10 18 424 362 776 8.18e-34 134
Msa0820890 MtrunA17_Chr7g0234501 43.478 138 76 1 55 192 434 569 1.09e-33 133
Msa0820890 MtrunA17_Chr3g0114181 24.427 393 264 10 57 424 415 799 3.50e-33 132
Msa0820890 MtrunA17_Chr3g0091591 26.207 435 275 12 24 424 287 709 4.07e-33 132
Msa0820890 MtrunA17_Chr5g0397051 28.472 432 269 13 18 424 362 778 4.25e-33 132
Msa0820890 MtrunA17_Chr5g0397061 29.002 431 266 14 18 424 231 645 4.31e-33 132
Msa0820890 MtrunA17_Chr5g0428341 25.909 440 270 12 24 424 274 696 1.13e-32 130
Msa0820890 MtrunA17_Chr4g0013341 27.475 404 255 11 55 425 380 778 9.61e-32 128
Msa0820890 MtrunA17_Chr5g0441011 100.000 58 0 0 1 58 1 58 3.64e-29 118
Msa0820890 MtrunA17_Chr4g0039911 24.494 445 288 11 16 424 354 786 1.23e-26 113
Msa0820890 MtrunA17_Chr4g0069671 26.531 441 276 13 18 424 359 785 3.77e-26 111
Msa0820890 MtrunA17_Chr7g0262901 25.108 462 279 15 22 425 363 815 6.41e-25 107
Msa0820890 MtrunA17_Chr7g0253481 27.072 362 224 11 89 425 25 371 7.52e-24 102
Msa0820890 MtrunA17_Chr7g0262911 26.432 454 278 18 10 425 349 784 1.63e-21 97.4
Msa0820890 MtrunA17_Chr5g0428031 74.510 51 13 0 8 58 4 54 1.73e-18 87.4
Msa0820890 MtrunA17_Chr7g0262891 24.728 368 214 14 108 425 13 367 1.52e-17 84.3
Msa0820890 MtrunA17_Chr4g0063881 58.462 65 25 1 5 69 3 65 1.88e-17 84.3
Msa0820890 MtrunA17_Chr2g0304111 69.231 52 16 0 7 58 17 68 2.36e-15 77.8
Msa0820890 MtrunA17_Chr8g0346081 60.000 55 22 0 4 58 8 62 3.41e-14 74.3
Msa0820890 MtrunA17_Chr8g0346071 63.462 52 19 0 7 58 11 62 7.15e-14 73.2
Msa0820890 MtrunA17_Chr4g0072831 53.968 63 26 1 1 63 1 60 7.45e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0820890 AT5G22900.1 40.741 378 204 6 62 425 447 818 1.16e-85 279
Msa0820890 AT3G44900.1 40.270 370 211 6 63 425 447 813 1.65e-85 278
Msa0820890 AT2G28180.1 35.533 394 225 6 54 431 435 815 6.02e-76 253
Msa0820890 AT5G22910.1 38.587 368 207 7 59 415 427 786 5.70e-73 244
Msa0820890 AT3G44920.1 36.997 373 225 6 54 422 410 776 3.19e-72 242
Msa0820890 AT3G44930.1 36.288 361 220 6 59 415 415 769 1.40e-68 233
Msa0820890 AT2G28170.1 36.074 377 225 6 57 425 431 799 2.09e-68 232
Msa0820890 AT1G08150.1 35.526 380 219 6 52 418 436 802 6.07e-67 228
Msa0820890 AT3G44910.1 37.190 363 207 7 56 415 413 757 6.26e-67 228
Msa0820890 AT2G13620.1 33.790 438 253 9 16 424 359 788 1.98e-66 227
Msa0820890 AT1G08135.1 36.193 373 218 7 59 425 437 795 1.96e-65 224
Msa0820890 AT1G08140.1 33.506 385 229 6 57 426 433 805 1.08e-64 222
Msa0820890 AT1G05580.2 33.067 375 230 9 67 424 317 687 3.01e-55 196
Msa0820890 AT1G05580.1 33.067 375 230 9 67 424 428 798 1.19e-54 195
Msa0820890 AT2G31910.3 32.918 401 239 10 51 424 292 689 1.09e-53 191
Msa0820890 AT2G31910.2 32.918 401 239 10 51 424 292 689 1.09e-53 191
Msa0820890 AT2G31910.1 32.918 401 239 10 51 424 389 786 4.73e-53 190
Msa0820890 AT2G30240.1 31.926 379 235 10 57 425 421 786 1.35e-52 189
Msa0820890 AT1G06970.1 30.709 381 243 9 56 425 415 785 2.38e-52 188
Msa0820890 AT5G37060.1 30.000 420 255 7 49 436 429 841 8.66e-50 181
Msa0820890 AT5G58460.1 30.075 399 253 8 52 426 433 829 4.10e-49 179
Msa0820890 AT5G01680.1 31.941 407 251 9 36 429 387 780 4.62e-46 170
Msa0820890 AT5G01690.1 30.049 406 264 7 24 424 377 767 2.72e-42 159
Msa0820890 AT3G17630.1 26.761 426 276 11 18 423 361 770 3.53e-36 142
Msa0820890 AT3G17630.2 26.761 426 276 11 18 423 361 770 3.53e-36 142
Msa0820890 AT1G16380.1 29.750 400 227 13 67 425 389 775 6.69e-35 138
Msa0820890 AT5G41610.2 27.896 423 259 13 37 424 305 716 4.06e-32 129
Msa0820890 AT5G41610.1 27.857 420 263 12 37 424 373 784 6.91e-32 129
Msa0820890 AT5G41610.3 27.857 420 263 12 37 424 373 784 6.91e-32 129
Msa0820890 AT1G79400.1 28.061 392 240 13 67 425 391 773 8.20e-32 129
Msa0820890 AT3G52080.1 28.109 402 245 11 61 428 397 788 1.58e-31 128
Msa0820890 AT3G53720.1 28.125 448 252 16 37 425 379 815 2.56e-29 121
Msa0820890 AT3G53720.2 28.125 448 252 16 37 425 306 742 3.36e-29 121
Msa0820890 AT1G64170.1 27.816 435 274 15 18 424 369 791 1.55e-26 113
Msa0820890 AT4G23700.2 26.490 453 283 15 16 427 354 797 2.07e-26 112
Msa0820890 AT4G23700.1 26.490 453 283 15 16 427 354 797 2.07e-26 112
Msa0820890 AT2G26980.2 92.593 54 4 0 5 58 6 59 9.87e-25 103
Msa0820890 AT2G26980.1 68.675 83 17 2 5 87 6 79 4.24e-24 103
Msa0820890 AT2G26980.3 68.675 83 17 2 5 87 6 79 7.86e-24 103
Msa0820890 AT2G26980.5 68.675 83 17 2 5 87 6 79 8.31e-24 103
Msa0820890 AT2G26980.4 68.675 83 17 2 5 87 16 89 9.04e-24 103
Msa0820890 AT5G21326.1 77.586 58 13 0 1 58 1 58 3.65e-21 95.9
Msa0820890 AT5G35410.2 52.222 90 30 3 8 93 6 86 1.42e-16 81.3
Msa0820890 AT5G35410.1 52.222 90 30 3 8 93 6 86 2.78e-16 81.3
Msa0820890 AT5G21222.1 55.172 87 30 2 1 87 1 78 2.90e-16 82.0
Msa0820890 AT5G21222.2 55.172 87 30 2 1 87 1 78 2.90e-16 82.0
Msa0820890 AT5G21222.4 55.172 87 30 2 1 87 1 78 2.90e-16 82.0
Msa0820890 AT5G21222.3 55.172 87 30 2 1 87 1 78 2.90e-16 82.0
Msa0820890 AT4G24400.2 68.627 51 16 0 8 58 4 54 3.40e-16 80.5
Msa0820890 AT4G24400.1 68.627 51 16 0 8 58 4 54 5.12e-16 80.1
Msa0820890 AT1G01140.3 59.649 57 23 0 2 58 8 64 1.50e-15 79.0
Msa0820890 AT1G01140.1 59.649 57 23 0 2 58 8 64 1.57e-15 79.0
Msa0820890 AT1G01140.2 59.649 57 23 0 2 58 8 64 1.58e-15 79.0
Msa0820890 AT1G30270.1 73.469 49 13 0 10 58 28 76 6.67e-15 77.0
Msa0820890 AT1G30270.2 73.469 49 13 0 10 58 28 76 6.79e-15 77.0

Find 94 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTACAAAATCCACCCTTTA+AGG 0.174338 5_3:+58547436 None:intergenic
TGTTTACTGCAAAGCTTAAA+AGG 0.181710 5_3:-58554384 Msa0820890:five_prime_UTR
AGAAATTCTCCTCACTTATT+AGG 0.221081 5_3:+58554406 None:intergenic
CGATTAGCCGTCATATATTT+AGG 0.226165 5_3:-58547876 Msa0820890:CDS
GTTGGAAGAAAGAAAATTAT+TGG 0.244021 5_3:-58555212 Msa0820890:five_prime_UTR
TGTTTATTGATACTGCATTT+TGG 0.248668 5_3:+58548159 None:intergenic
TTGGAGGAGTTCATGGTAAT+TGG 0.269457 5_3:-58547744 Msa0820890:CDS
TCACGCATGAATGACCTTAA+AGG 0.269729 5_3:-58547450 Msa0820890:CDS
CAACCCTTTGGATCATATAT+TGG 0.297367 5_3:-58555165 Msa0820890:intron
TCACCAATAGCACCGAGTTC+TGG 0.329836 5_3:+58547534 None:intergenic
ATTGTCTTGTGCAGCTTGTT+TGG 0.332889 5_3:-58555243 Msa0820890:intron
TTTCCAGAACTCGGTGCTAT+TGG 0.336745 5_3:-58547537 Msa0820890:CDS
TAATAGTAGTGCATCTGTTT+TGG 0.338193 5_3:-58547490 Msa0820890:CDS
GTTACACATCAGTGCTTATC+TGG 0.341026 5_3:+58555536 None:intergenic
AAACATGATTTCTTTATAGT+TGG 0.344331 5_3:-58547615 Msa0820890:CDS
ATTATTAATAGGAAAACATT+TGG 0.348673 5_3:-58548557 Msa0820890:CDS
ACATCTTCAAACATGAGATT+TGG 0.353736 5_3:+58548116 None:intergenic
AATCTGTTGCTGCTGAAATA+TGG 0.354156 5_3:+58548372 None:intergenic
AAGAAAGAAAATTATTGGTT+TGG 0.370591 5_3:-58555207 Msa0820890:five_prime_UTR
TATGTATGCAGATTATTAAT+AGG 0.380836 5_3:-58548568 Msa0820890:intron
CTTGACCATCTTATATGAAA+TGG 0.383161 5_3:+58548050 None:intergenic
ATTGCTGAAAATGCAAGATT+AGG 0.386235 5_3:-58555487 Msa0820890:five_prime_UTR
TAAGGAAAACATAGAAGAAT+TGG 0.395388 5_3:-58547763 Msa0820890:CDS
ATCCTGATGCTTGTCTTTGA+AGG 0.398970 5_3:+58548246 None:intergenic
AGAAGAATTGGAGGAGTTCA+TGG 0.403406 5_3:-58547751 Msa0820890:CDS
TGTGAAGAAGAGTATATGTT+TGG 0.407901 5_3:+58555383 None:intergenic
TTCTTCCATTTCATATAAGA+TGG 0.408392 5_3:-58548055 Msa0820890:CDS
AACATGATTTCTTTATAGTT+GGG 0.411824 5_3:-58547614 Msa0820890:CDS
CTTTGAGGAGATAACTGATA+TGG 0.417170 5_3:+58555318 None:intergenic
TAAATAAAATAAAATATTTG+TGG 0.425530 5_3:+58555589 None:intergenic
TCTGCTAATCCATCACTTTG+AGG 0.428750 5_3:+58547570 None:intergenic
TGAAGAACATCAACTGTGAT+TGG 0.429990 5_3:+58548317 None:intergenic
CACGCATGAATGACCTTAAA+GGG 0.450947 5_3:-58547449 Msa0820890:CDS
CAAGCACAAGATGGCTGAGC+AGG 0.459533 5_3:-58554203 Msa0820890:intron
GTTTACTGCAAAGCTTAAAA+GGG 0.466886 5_3:-58554383 Msa0820890:five_prime_UTR
CTTCATGTAATTGAGCTAGT+TGG 0.471013 5_3:-58548299 Msa0820890:CDS
CTGCAAAGCTTAAAAGGGTG+TGG 0.476737 5_3:-58554378 Msa0820890:five_prime_UTR
TTGAATTAGCACGAGTTACA+AGG 0.486186 5_3:+58547940 None:intergenic
GCTTGTTTGGTTATTGAAGT+TGG 0.490700 5_3:-58555230 Msa0820890:five_prime_UTR
TGTTTACCGTCTTATTGCTA+AGG 0.491922 5_3:-58547781 Msa0820890:CDS
GTGATTGGTTTCTCTTGCGT+TGG 0.497582 5_3:+58548332 None:intergenic
AAGTACTAAGAGAATTGAAT+CGG 0.499895 5_3:-58547998 Msa0820890:CDS
TGCCTTCAAAGACAAGCATC+AGG 0.504130 5_3:-58548248 Msa0820890:CDS
GGTAATTGGTGATGAAATGT+TGG 0.507206 5_3:-58547730 Msa0820890:CDS
CAATAAGACGGTAAACAACT+AGG 0.508468 5_3:+58547787 None:intergenic
TCTTCAAACATGAGATTTGG+TGG 0.516638 5_3:+58548119 None:intergenic
ACTCATTCTCCTCAAAGTGA+TGG 0.527724 5_3:-58547579 Msa0820890:CDS
GGAAAACATAGAAGAATTGG+AGG 0.532583 5_3:-58547760 Msa0820890:CDS
TATGAGGTTGGAAGGACCAT+TGG 0.536887 5_3:-58554316 Msa0820890:CDS
AGATGTTTGTAATCTTGCAT+TGG 0.538697 5_3:-58548099 Msa0820890:CDS
ACAAGGATTCCAACGGAACA+TGG 0.543805 5_3:+58547957 None:intergenic
TATTCTGATTTAATTGACGT+TGG 0.547228 5_3:+58547909 None:intergenic
GAAATTGCTCCATGTTCCGT+TGG 0.548053 5_3:-58547966 Msa0820890:CDS
AGAGTCGGTATATATGAGGT+TGG 0.548443 5_3:-58554328 Msa0820890:CDS
AAAGTGATGGATTAGCAGAA+TGG 0.549025 5_3:-58547566 Msa0820890:CDS
TTGCAAAGGTGAAATTTGCA+AGG 0.553897 5_3:-58554282 Msa0820890:CDS
GCGTAGAGTCGGTATATATG+AGG 0.554888 5_3:-58554332 Msa0820890:CDS
TGCAAATGTTCCCTCACCAA+TGG 0.556454 5_3:+58554300 None:intergenic
GATCCATCAAGAAAATATGT+TGG 0.558329 5_3:-58548470 Msa0820890:CDS
CTCTGAGACAGGTGAAGCCG+TGG 0.561817 5_3:-58554257 Msa0820890:CDS
GATGCACTACTATTAAGATC+AGG 0.568109 5_3:+58547498 None:intergenic
TTTGCAAGGAACTCTGAGAC+AGG 0.568674 5_3:-58554268 Msa0820890:CDS
AATACCAATATATGATCCAA+AGG 0.569637 5_3:+58555161 None:intergenic
CCTAAAATTAAGCGTAGAGT+CGG 0.573829 5_3:-58554343 Msa0820890:CDS
TCGGTATATATGAGGTTGGA+AGG 0.575937 5_3:-58554324 Msa0820890:CDS
ATACCAATATATGATCCAAA+GGG 0.578905 5_3:+58555162 None:intergenic
TGGAAATAACGATGATGAAG+AGG 0.579641 5_3:-58547853 Msa0820890:CDS
CAGTGGAAAGAATGAAGAGA+AGG 0.579698 5_3:+58555341 None:intergenic
CAGATAGGAAAATATTTCTG+AGG 0.581871 5_3:+58555625 None:intergenic
ATTTCCACCTAAATATATGA+CGG 0.586300 5_3:+58547869 None:intergenic
CATATAAGATGGTCAAGTGA+TGG 0.590709 5_3:-58548044 Msa0820890:CDS
GAAAGTTCTCAAGCACAAGA+TGG 0.593800 5_3:-58554212 Msa0820890:CDS
AGGCAATGAGGAATGAAAAG+AGG 0.594559 5_3:+58548266 None:intergenic
TGGAGTGAATTTCCAGAACT+CGG 0.595199 5_3:-58547546 Msa0820890:CDS
ATGAGGAATGAAAAGAGGTA+AGG 0.596121 5_3:+58548271 None:intergenic
TACTTCATATAAATCATACT+CGG 0.597251 5_3:-58548222 Msa0820890:CDS
GGAGATAACTGATATGGCAG+TGG 0.603761 5_3:+58555324 None:intergenic
TTATAGCAACCATTGTACAT+TGG 0.607021 5_3:-58548511 Msa0820890:CDS
GTTGGAAGGACCATTGGTGA+GGG 0.619769 5_3:-58554310 Msa0820890:CDS
TGGTGAGGGAACATTTGCAA+AGG 0.627943 5_3:-58554296 Msa0820890:CDS
GCGTTGGACAACATAAGTGT+AGG 0.628837 5_3:+58548348 None:intergenic
GTAGAGATTCCTAATAAGTG+AGG 0.629026 5_3:-58554415 Msa0820890:five_prime_UTR
GCTCATAGATATCGAAAGCG+AGG 0.633609 5_3:+58548189 None:intergenic
TTAGCCGTCATATATTTAGG+TGG 0.639920 5_3:-58547873 Msa0820890:CDS
TTAAACATGCTGAAAATGTG+AGG 0.644012 5_3:-58547701 Msa0820890:CDS
GGTTGGAAGGACCATTGGTG+AGG 0.647248 5_3:-58554311 Msa0820890:CDS
CTTCACTGACCAATGTACAA+TGG 0.648981 5_3:+58548502 None:intergenic
GCTTGTCTTTGAAGGCAATG+AGG 0.653357 5_3:+58548254 None:intergenic
AACGAACGATGAATAATCGT+AGG 0.664632 5_3:-58547815 Msa0820890:CDS
TATGACGGCTAATCGAGTAG+TGG 0.665598 5_3:+58547884 None:intergenic
AAATTTGAGTTAATATGGTG+TGG 0.667774 5_3:+58555745 None:intergenic
ACGAGTTACAAGGATTCCAA+CGG 0.675226 5_3:+58547950 None:intergenic
GCATGAATGACCTTAAAGGG+TGG 0.676983 5_3:-58547446 Msa0820890:CDS
ATGAAATGGAAGAATGACGA+TGG 0.694343 5_3:+58548064 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAAAAAATCAATTTTTAAA+AGG + chr5_3:58548113-58548132 None:intergenic 10.0%
!!! CTTTTAAAAATTGATTTTTT+AGG - chr5_3:58548111-58548130 Msa0820890:CDS 10.0%
!!! ATTTTGAAACAATTTTTTTT+TGG - chr5_3:58551344-58551363 Msa0820890:intron 10.0%
!!! TTTAAATGTTTATTTTGTAT+AGG + chr5_3:58551686-58551705 None:intergenic 10.0%
!! TTTAAAAAAAATATGTCATT+TGG + chr5_3:58552553-58552572 None:intergenic 10.0%
!! AATATATCAATACTTAATAA+TGG + chr5_3:58552807-58552826 None:intergenic 10.0%
!!! TTATTATATTTCTATAGTTT+AGG - chr5_3:58554463-58554482 Msa0820890:intron 10.0%
!!! TATTATATTTCTATAGTTTA+GGG - chr5_3:58554464-58554483 Msa0820890:intron 10.0%
!!! TACAAAAATTTGAGTTAATA+TGG + chr5_3:58547458-58547477 None:intergenic 15.0%
!!! ATTGATTTTTTAGGATTTTT+TGG - chr5_3:58548120-58548139 Msa0820890:CDS 15.0%
!!! ATCCATTTTATAGTTTTTTT+TGG - chr5_3:58549817-58549836 Msa0820890:intron 15.0%
!! AACCAAAAAAAACTATAAAA+TGG + chr5_3:58549822-58549841 None:intergenic 15.0%
!! AAACCTAAATCAAATTTATT+TGG - chr5_3:58549908-58549927 Msa0820890:intron 15.0%
!!! AATCATTCATTTTAATATGA+GGG + chr5_3:58550119-58550138 None:intergenic 15.0%
!!! AATTTCGTTTTTAATCATAT+TGG + chr5_3:58550288-58550307 None:intergenic 15.0%
!! TATGGATAAATTGATAAATA+TGG - chr5_3:58550413-58550432 Msa0820890:intron 15.0%
!! TATTTGTAATTATTATTCCA+AGG - chr5_3:58550458-58550477 Msa0820890:intron 15.0%
!!! ATATCATTCATTTTAATATG+AGG - chr5_3:58550634-58550653 Msa0820890:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr5_3:58551217-58551236 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr5_3:58551216-58551235 Msa0820890:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr5_3:58551240-58551259 Msa0820890:intron 15.0%
!!! AACAATCATGTTTAAAATTT+AGG - chr5_3:58552057-58552076 Msa0820890:intron 15.0%
!! ATTAGAACAAAAAAATTCAA+TGG + chr5_3:58552235-58552254 None:intergenic 15.0%
!! TTTACTTTAATCAATCAAAA+TGG + chr5_3:58552877-58552896 None:intergenic 15.0%
!!! ACAATTTTGTTAATACAAAT+AGG - chr5_3:58552941-58552960 Msa0820890:intron 15.0%
!! TAATACAAATAGGTTAATTA+AGG - chr5_3:58552951-58552970 Msa0820890:intron 15.0%
!! ATTAATTGTATTAATTCCAT+TGG - chr5_3:58553560-58553579 Msa0820890:intron 15.0%
!! CATTTATGTTATTATTTCAA+TGG - chr5_3:58553650-58553669 Msa0820890:intron 15.0%
!!! GTATTGCATTTAATTTTTTT+CGG - chr5_3:58554055-58554074 Msa0820890:intron 15.0%
!! TTTATAAATGAATGATCAAA+AGG - chr5_3:58554231-58554250 Msa0820890:CDS 15.0%
!! TGTTATATTGCTATAATTTA+GGG + chr5_3:58554326-58554345 None:intergenic 15.0%
!! TTGTTATATTGCTATAATTT+AGG + chr5_3:58554327-58554346 None:intergenic 15.0%
!! AAATATACTTCAAATGTATA+TGG - chr5_3:58554566-58554585 Msa0820890:intron 15.0%
!! ATTATTAATAGGAAAACATT+TGG - chr5_3:58554638-58554657 Msa0820890:intron 15.0%
!!! AAGAAAGAAAATTATTGGTT+TGG - chr5_3:58547988-58548007 Msa0820890:CDS 20.0%
!! AATGAACTTTATACTAAAGT+TGG + chr5_3:58548085-58548104 None:intergenic 20.0%
!!! TGAAGAGTCTTTTTTTTTTT+TGG - chr5_3:58548167-58548186 Msa0820890:CDS 20.0%
!!! AGTCTTTTTTTTTTTTGGTA+GGG - chr5_3:58548172-58548191 Msa0820890:CDS 20.0%
!! CATAATTGTTTGAATATTGA+TGG - chr5_3:58548249-58548268 Msa0820890:CDS 20.0%
!! TAATGTTGAAATAAATTGAC+TGG - chr5_3:58548317-58548336 Msa0820890:CDS 20.0%
!! AAAAGAAATAATCACTAGTT+TGG + chr5_3:58548579-58548598 None:intergenic 20.0%
!!! CTAGTGATTATTTCTTTTAA+AGG - chr5_3:58548581-58548600 Msa0820890:intron 20.0%
!!! TGATTATTTCTTTTAAAGGA+AGG - chr5_3:58548585-58548604 Msa0820890:intron 20.0%
!!! TATAAGTTTTGGATTAGTTT+AGG - chr5_3:58548732-58548751 Msa0820890:intron 20.0%
!! TCAAGAATTAAATGAAGAAA+AGG + chr5_3:58549042-58549061 None:intergenic 20.0%
!! NNNNNNNNNCGAACAACATT+TGG + chr5_3:58549289-58549308 None:intergenic 20.0%
!!! TGACCAAATAAATTTGATTT+AGG + chr5_3:58549914-58549933 None:intergenic 20.0%
!! TGTCCAAATGAAATTAATTT+AGG - chr5_3:58550026-58550045 Msa0820890:intron 20.0%
!! GTCCAAATGAAATTAATTTA+GGG - chr5_3:58550027-58550046 Msa0820890:intron 20.0%
!! AACCCTAAATTAATTTCATT+TGG + chr5_3:58550032-58550051 None:intergenic 20.0%
!!! CAATCATTCATTTTAATATG+AGG + chr5_3:58550120-58550139 None:intergenic 20.0%
!!! AATTTTTTTGTAGAGTTCTT+CGG + chr5_3:58550379-58550398 None:intergenic 20.0%
!! AATTTAAAAATTGCAGCATA+TGG - chr5_3:58550395-58550414 Msa0820890:intron 20.0%
!!! AAGTTTAAAACATGACTTAA+GGG + chr5_3:58550559-58550578 None:intergenic 20.0%
!!! TAAGTTTAAAACATGACTTA+AGG + chr5_3:58550560-58550579 None:intergenic 20.0%
!!! TCCCATATTTAATTTTCAAA+TGG - chr5_3:58550777-58550796 Msa0820890:intron 20.0%
!! GCCATTTGAAAATTAAATAT+GGG + chr5_3:58550781-58550800 None:intergenic 20.0%
!!! TGCCATTTGAAAATTAAATA+TGG + chr5_3:58550782-58550801 None:intergenic 20.0%
!!! TACTACTTAAAGATTTTGAT+TGG - chr5_3:58551060-58551079 Msa0820890:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr5_3:58551183-58551202 Msa0820890:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr5_3:58551226-58551245 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr5_3:58551303-58551322 Msa0820890:intron 20.0%
!! ACAATAAAGAAGGTTTAAAT+TGG - chr5_3:58551659-58551678 Msa0820890:intron 20.0%
!! GATTGTTTAAGTAATTAAGT+TGG + chr5_3:58552044-58552063 None:intergenic 20.0%
!!! AATTTTCATTATAGTCATGA+AGG + chr5_3:58552121-58552140 None:intergenic 20.0%
!! TTTAGAAATTAGAATCATGA+TGG + chr5_3:58552636-58552655 None:intergenic 20.0%
!!! TCTAATTTTATTTCTTCCAT+AGG - chr5_3:58552721-58552740 Msa0820890:intron 20.0%
!! GATAGTTAAATTAAAAGTGA+CGG - chr5_3:58552908-58552927 Msa0820890:intron 20.0%
!! ATTTCAACAATTTCATCATT+CGG - chr5_3:58553135-58553154 Msa0820890:intron 20.0%
!!! AATATTGCTTTGAATAATTG+CGG + chr5_3:58553478-58553497 None:intergenic 20.0%
!!! ATTTCAATGGTTTTTGTTTT+TGG - chr5_3:58553663-58553682 Msa0820890:intron 20.0%
!!! AATCAAAAGAAATTTTTCTG+AGG + chr5_3:58554129-58554148 None:intergenic 20.0%
!! GATCATTCATTTATAAACTA+TGG + chr5_3:58554228-58554247 None:intergenic 20.0%
!!! TCTCTTATTTTTAAAGTAAC+TGG - chr5_3:58554401-58554420 Msa0820890:five_prime_UTR 20.0%
!!! CTCTTATTTTTAAAGTAACT+GGG - chr5_3:58554402-58554421 Msa0820890:five_prime_UTR 20.0%
!! TATGTATGCAGATTATTAAT+AGG - chr5_3:58554627-58554646 Msa0820890:intron 20.0%
!! TACTTCATATAAATCATACT+CGG - chr5_3:58554973-58554992 Msa0820890:intron 20.0%
!! AAACATGATTTCTTTATAGT+TGG - chr5_3:58555580-58555599 Msa0820890:five_prime_UTR 20.0%
!! AACATGATTTCTTTATAGTT+GGG - chr5_3:58555581-58555600 Msa0820890:five_prime_UTR 20.0%
!! AAATTTGAGTTAATATGGTG+TGG + chr5_3:58547453-58547472 None:intergenic 25.0%
!!! GCAAAATCATAATTGTTTTG+TGG + chr5_3:58547530-58547549 None:intergenic 25.0%
!! CATTTTCAGCAATGAATTAT+GGG + chr5_3:58547701-58547720 None:intergenic 25.0%
!!! ATATGTTTGGCTTTTGATTA+TGG + chr5_3:58547802-58547821 None:intergenic 25.0%
! GTTGGAAGAAAGAAAATTAT+TGG - chr5_3:58547983-58548002 Msa0820890:CDS 25.0%
! ATACCAATATATGATCCAAA+GGG + chr5_3:58548036-58548055 None:intergenic 25.0%
! AATACCAATATATGATCCAA+AGG + chr5_3:58548037-58548056 None:intergenic 25.0%
!!! GATTTTTTAGGATTTTTTGG+AGG - chr5_3:58548123-58548142 Msa0820890:CDS 25.0%
! CTTCAAATCAAAAAGACAAA+AGG + chr5_3:58548152-58548171 None:intergenic 25.0%
!!! GAGTCTTTTTTTTTTTTGGT+AGG - chr5_3:58548171-58548190 Msa0820890:CDS 25.0%
!!! TTTTTTTTTTTTGGTAGGGT+GGG - chr5_3:58548176-58548195 Msa0820890:CDS 25.0%
!! AGAGAAAAAGGAACAATTTT+TGG + chr5_3:58548413-58548432 None:intergenic 25.0%
!!! TTTAAGTTGAAGAGAGAAAA+AGG + chr5_3:58548425-58548444 None:intergenic 25.0%
!!! TCTAAGATTTTTCTAGTACT+TGG - chr5_3:58548499-58548518 Msa0820890:CDS 25.0%
!! TGTTTTCAGTGTATAAGTTT+TGG - chr5_3:58548721-58548740 Msa0820890:intron 25.0%
! TAAATGAAGAAAAGGACTAA+AGG + chr5_3:58549034-58549053 None:intergenic 25.0%
!!! AATTTTGAAAACAGGACTAA+GGG + chr5_3:58549114-58549133 None:intergenic 25.0%
!!! GAAAACTGAATTTTGAAAAC+AGG + chr5_3:58549122-58549141 None:intergenic 25.0%
! TTGGAATGAACAAAATTTGA+TGG + chr5_3:58549163-58549182 None:intergenic 25.0%
!!! TGATAAGATTTGATTTGACT+CGG + chr5_3:58549521-58549540 None:intergenic 25.0%
! TTTCACTATTGTTGTAAGTA+GGG + chr5_3:58549582-58549601 None:intergenic 25.0%
!! TTTTCACTATTGTTGTAAGT+AGG + chr5_3:58549583-58549602 None:intergenic 25.0%
! AAAACTATAAAATGGATACG+TGG + chr5_3:58549814-58549833 None:intergenic 25.0%
! ATTTCTATTGTTCACTCATA+AGG + chr5_3:58550087-58550106 None:intergenic 25.0%
! GAGTGAACAATAGAAATAAA+TGG - chr5_3:58550090-58550109 Msa0820890:intron 25.0%
! AATGGAGATGAATAATTTGA+GGG + chr5_3:58550237-58550256 None:intergenic 25.0%
! ATTGGAGAAAATAAAGACAT+TGG + chr5_3:58550270-58550289 None:intergenic 25.0%
! CAATACAAAAGATGAAAACT+TGG + chr5_3:58550322-58550341 None:intergenic 25.0%
! AATATGGTCAAGAATGAATT+TGG - chr5_3:58550429-58550448 Msa0820890:intron 25.0%
! GAAAATATACGTTAACTCAT+TGG - chr5_3:58550498-58550517 Msa0820890:intron 25.0%
!! AGTTTAAAACATGACTTAAG+GGG + chr5_3:58550558-58550577 None:intergenic 25.0%
! AATGTTTGTAAATTGAGAGT+TGG + chr5_3:58550931-58550950 None:intergenic 25.0%
!!! ACTTAAAGATTTTGATTGGT+AGG - chr5_3:58551064-58551083 Msa0820890:intron 25.0%
! GACTAAAATCTAACAAACTT+CGG - chr5_3:58551721-58551740 Msa0820890:intron 25.0%
! CATGTAAATATAGCATTGTA+CGG - chr5_3:58551958-58551977 Msa0820890:intron 25.0%
!!! ATAAACATGTTTTGTTTCAC+AGG - chr5_3:58551993-58552012 Msa0820890:intron 25.0%
! TGTTCTAATTTCAATTCTTG+TGG - chr5_3:58552246-58552265 Msa0820890:intron 25.0%
! AACGAAATTAAAAGATCGAA+TGG - chr5_3:58552315-58552334 Msa0820890:intron 25.0%
!! TAAACCATCTGAAACAATAT+GGG + chr5_3:58552373-58552392 None:intergenic 25.0%
!! ATAAACCATCTGAAACAATA+TGG + chr5_3:58552374-58552393 None:intergenic 25.0%
! ATATTGTTTCAGATGGTTTA+TGG - chr5_3:58552373-58552392 Msa0820890:intron 25.0%
! TATTGTTTCAGATGGTTTAT+GGG - chr5_3:58552374-58552393 Msa0820890:intron 25.0%
! TACTTACAATCATTTGTGAA+AGG + chr5_3:58552527-58552546 None:intergenic 25.0%
! ACAAATAGGTTAATTAAGGT+AGG - chr5_3:58552955-58552974 Msa0820890:intron 25.0%
! ACAATACTCATTTCATTTGT+AGG - chr5_3:58553026-58553045 Msa0820890:intron 25.0%
!! ATAGACAAGTTATTTCCATA+TGG - chr5_3:58553099-58553118 Msa0820890:intron 25.0%
!! ATGTTCTTCGTTTTCATAAA+TGG - chr5_3:58553162-58553181 Msa0820890:intron 25.0%
! TTTCATAAATGGTGTACAAA+TGG - chr5_3:58553173-58553192 Msa0820890:intron 25.0%
! GCATGGATAATTTCAATAAT+TGG - chr5_3:58553228-58553247 Msa0820890:intron 25.0%
! GGTATAAACAAAACACTTAA+TGG + chr5_3:58553264-58553283 None:intergenic 25.0%
!!! TAAGTTTCTTAAAAGTGTTG+TGG + chr5_3:58553526-58553545 None:intergenic 25.0%
!! TATGTAGACCAATAATGTTT+TGG - chr5_3:58553583-58553602 Msa0820890:intron 25.0%
!! TTGATGATCCAAAACATTAT+TGG + chr5_3:58553594-58553613 None:intergenic 25.0%
! ATTAATCAAGAATTTGCCAT+AGG - chr5_3:58553702-58553721 Msa0820890:intron 25.0%
!!! TGTTAAAGCAGATTTTTCAA+TGG - chr5_3:58553841-58553860 Msa0820890:intron 25.0%
!! GGATTTTTCTTCATCTATTA+TGG - chr5_3:58553862-58553881 Msa0820890:intron 25.0%
! GCTCTTATAGCTATAAAATT+TGG + chr5_3:58554206-58554225 None:intergenic 25.0%
!! TATCCAACATATTTTCTTGA+TGG + chr5_3:58554731-58554750 None:intergenic 25.0%
! AATATGTTGGATACCAAAAA+AGG - chr5_3:58554738-58554757 Msa0820890:intron 25.0%
!! TGTTTATTGATACTGCATTT+TGG + chr5_3:58555039-58555058 None:intergenic 25.0%
! TTCTTCCATTTCATATAAGA+TGG - chr5_3:58555140-58555159 Msa0820890:intron 25.0%
! AAGTACTAAGAGAATTGAAT+CGG - chr5_3:58555197-58555216 Msa0820890:five_prime_UTR 25.0%
! TATTCTGATTTAATTGACGT+TGG + chr5_3:58555289-58555308 None:intergenic 25.0%
! ATTTCCACCTAAATATATGA+CGG + chr5_3:58555329-58555348 None:intergenic 25.0%
! TAAGGAAAACATAGAAGAAT+TGG - chr5_3:58555432-58555451 Msa0820890:five_prime_UTR 25.0%
!! AAAGAAGTTTTCACTAAGAA+TGG - chr5_3:58555520-58555539 Msa0820890:five_prime_UTR 25.0%
! CAGATAGGAAAATATTTCTG+AGG + chr5_3:58547573-58547592 None:intergenic 30.0%
GGAAAAAAACATTGACAGAT+AGG + chr5_3:58547588-58547607 None:intergenic 30.0%
! GCATTTTCAGCAATGAATTA+TGG + chr5_3:58547702-58547721 None:intergenic 30.0%
ATTGCTGAAAATGCAAGATT+AGG - chr5_3:58547708-58547727 Msa0820890:CDS 30.0%
! TGTGAAGAAGAGTATATGTT+TGG + chr5_3:58547815-58547834 None:intergenic 30.0%
!!! CTTTTTTTTTTTTGGTAGGG+TGG - chr5_3:58548175-58548194 Msa0820890:CDS 30.0%
CAAACATCAATCACCAAAAA+AGG + chr5_3:58548213-58548232 None:intergenic 30.0%
!! GTCTAAAGTTTGTGATTTTG+TGG - chr5_3:58548290-58548309 Msa0820890:CDS 30.0%
TTCATATTCAAGCTGAATTC+TGG - chr5_3:58548344-58548363 Msa0820890:CDS 30.0%
ACTGAAAACAATGTGTGTTT+AGG + chr5_3:58548711-58548730 None:intergenic 30.0%
TGAATTCTGATATGCATTTC+AGG - chr5_3:58548758-58548777 Msa0820890:intron 30.0%
AGAAATTCTCCTCACTTATT+AGG + chr5_3:58548792-58548811 None:intergenic 30.0%
TGTTTACTGCAAAGCTTAAA+AGG - chr5_3:58548811-58548830 Msa0820890:intron 30.0%
GTTTACTGCAAAGCTTAAAA+GGG - chr5_3:58548812-58548831 Msa0820890:intron 30.0%
!! GAATTTTGAAAACAGGACTA+AGG + chr5_3:58549115-58549134 None:intergenic 30.0%
!!! ATGTGTTTTTTCAGATCAAG+AGG - chr5_3:58549233-58549252 Msa0820890:intron 30.0%
!!! TGTGTTTTTTCAGATCAAGA+GGG - chr5_3:58549234-58549253 Msa0820890:intron 30.0%
GCGAACTTGAGTTAAAAAAA+TGG - chr5_3:58549466-58549485 Msa0820890:intron 30.0%
AATGTTGAGCAATTCTTACA+TGG - chr5_3:58549881-58549900 Msa0820890:intron 30.0%
TAAAGCTGAAAAAGGAAGTA+GGG + chr5_3:58550201-58550220 None:intergenic 30.0%
TTAAAGCTGAAAAAGGAAGT+AGG + chr5_3:58550202-58550221 None:intergenic 30.0%
AGACATGTTAAAGCTGAAAA+AGG + chr5_3:58550209-58550228 None:intergenic 30.0%
ATGGAGATGAATAATTTGAG+GGG + chr5_3:58550236-58550255 None:intergenic 30.0%
CAATGGAGATGAATAATTTG+AGG + chr5_3:58550238-58550257 None:intergenic 30.0%
!! GACATTGGTTTAGATTTCAA+TGG + chr5_3:58550255-58550274 None:intergenic 30.0%
! GTTTAAAACATGACTTAAGG+GGG + chr5_3:58550557-58550576 None:intergenic 30.0%
TTCCATTGACATCTAAATGT+GGG + chr5_3:58550825-58550844 None:intergenic 30.0%
CATGTTAGTTGACAAGTAAA+GGG + chr5_3:58550877-58550896 None:intergenic 30.0%
! TTGTAAATTGAGAGTTGGTT+AGG + chr5_3:58550926-58550945 None:intergenic 30.0%
AGAGTTATAATTGACCTTAG+TGG + chr5_3:58551041-58551060 None:intergenic 30.0%
! CTTTTCCAAAACATAACAAG+AGG - chr5_3:58551418-58551437 Msa0820890:intron 30.0%
!! TCTAACCTCTTGTTATGTTT+TGG + chr5_3:58551426-58551445 None:intergenic 30.0%
! ATGGAAGTATGAAACAAATG+GGG + chr5_3:58551519-58551538 None:intergenic 30.0%
! CATGGAAGTATGAAACAAAT+GGG + chr5_3:58551520-58551539 None:intergenic 30.0%
! TCATGGAAGTATGAAACAAA+TGG + chr5_3:58551521-58551540 None:intergenic 30.0%
!! ATGAGGGAATTTTTGTTTCA+TGG + chr5_3:58551538-58551557 None:intergenic 30.0%
AGAGATGTTAGATAGTATGA+GGG + chr5_3:58551554-58551573 None:intergenic 30.0%
AAGAGATGTTAGATAGTATG+AGG + chr5_3:58551555-58551574 None:intergenic 30.0%
TCTTCTTTCGACAATAAAGA+AGG - chr5_3:58551649-58551668 Msa0820890:intron 30.0%
!!! GCTATATGCTAGTTTTTTTG+TGG - chr5_3:58551790-58551809 Msa0820890:intron 30.0%
!!! TATGCTAGTTTTTTTGTGGA+AGG - chr5_3:58551794-58551813 Msa0820890:intron 30.0%
!!! AATATACGCAGTTTGTTTTG+AGG - chr5_3:58552341-58552360 Msa0820890:intron 30.0%
! AAACCATCTGAAACAATATG+GGG + chr5_3:58552372-58552391 None:intergenic 30.0%
ATTGTTTCAGATGGTTTATG+GGG - chr5_3:58552375-58552394 Msa0820890:intron 30.0%
! AACATTGTTTGAGTTACAGT+TGG - chr5_3:58552437-58552456 Msa0820890:intron 30.0%
GAGAAGGAAACTACATATTT+GGG + chr5_3:58552481-58552500 None:intergenic 30.0%
TGAGAAGGAAACTACATATT+TGG + chr5_3:58552482-58552501 None:intergenic 30.0%
TCATTTGTGAAAGGAATTGA+GGG + chr5_3:58552518-58552537 None:intergenic 30.0%
ATCATTTGTGAAAGGAATTG+AGG + chr5_3:58552519-58552538 None:intergenic 30.0%
CTAATTTCTAAACACTCATG+TGG - chr5_3:58552644-58552663 Msa0820890:intron 30.0%
TTATGTGAAGAAGTTACCTA+TGG + chr5_3:58552740-58552759 None:intergenic 30.0%
GAAGCCATTCAAAAAATAGA+TGG - chr5_3:58553309-58553328 Msa0820890:intron 30.0%
! TTTGGATTTGAAGTTCACTT+AGG + chr5_3:58553401-58553420 None:intergenic 30.0%
! ATTATTGGTCTACATACCAA+TGG + chr5_3:58553579-58553598 None:intergenic 30.0%
! TATGGTGTATACTAGTTTAG+CGG - chr5_3:58553880-58553899 Msa0820890:intron 30.0%
! TTTTGATCATGTGAGTTACA+AGG + chr5_3:58553907-58553926 None:intergenic 30.0%
!! CAAAAGAAATTTTTCTGAGG+AGG + chr5_3:58554126-58554145 None:intergenic 30.0%
CTACCATTCTCTATTCTATT+TGG - chr5_3:58554299-58554318 Msa0820890:CDS 30.0%
AGAGACATAATGATAGTTCA+AGG + chr5_3:58554386-58554405 None:intergenic 30.0%
!! GATGGATTAATAACAGTGTA+AGG - chr5_3:58554435-58554454 Msa0820890:intron 30.0%
GATTAATAACAGTGTAAGGA+TGG - chr5_3:58554439-58554458 Msa0820890:intron 30.0%
TTATAGCAACCATTGTACAT+TGG - chr5_3:58554684-58554703 Msa0820890:intron 30.0%
GATCCATCAAGAAAATATGT+TGG - chr5_3:58554725-58554744 Msa0820890:intron 30.0%
ATACCAAAAAAGGAACATGA+TGG - chr5_3:58554748-58554767 Msa0820890:intron 30.0%
TACCAAAAAAGGAACATGAT+GGG - chr5_3:58554749-58554768 Msa0820890:intron 30.0%
ACATCTTCAAACATGAGATT+TGG + chr5_3:58555082-58555101 None:intergenic 30.0%
AGATGTTTGTAATCTTGCAT+TGG - chr5_3:58555096-58555115 Msa0820890:intron 30.0%
CTTGACCATCTTATATGAAA+TGG + chr5_3:58555148-58555167 None:intergenic 30.0%
! TGTTTTCCTTAGCAATAAGA+CGG + chr5_3:58555423-58555442 None:intergenic 30.0%
TTAAACATGCTGAAAATGTG+AGG - chr5_3:58555494-58555513 Msa0820890:five_prime_UTR 30.0%
! TAATAGTAGTGCATCTGTTT+TGG - chr5_3:58555705-58555724 Msa0820890:five_prime_UTR 30.0%
!!! AGGCACAAAGATTTTTTGTC+TGG - chr5_3:58547728-58547747 Msa0820890:CDS 35.0%
!! GGCTTTTGATTATGGCAAAA+GGG + chr5_3:58547794-58547813 None:intergenic 35.0%
!! TGGCTTTTGATTATGGCAAA+AGG + chr5_3:58547795-58547814 None:intergenic 35.0%
! CTTTGAGGAGATAACTGATA+TGG + chr5_3:58547880-58547899 None:intergenic 35.0%
GCTTGTTTGGTTATTGAAGT+TGG - chr5_3:58547965-58547984 Msa0820890:CDS 35.0%
!!! TTTCTTTTTCAGCAACCCTT+TGG - chr5_3:58548018-58548037 Msa0820890:CDS 35.0%
CAACCCTTTGGATCATATAT+TGG - chr5_3:58548030-58548049 Msa0820890:CDS 35.0%
!!! GGTCTCATTAGTACCTTTTT+TGG - chr5_3:58548197-58548216 Msa0820890:CDS 35.0%
TTACTAGAAGATAGACTCTG+AGG - chr5_3:58548375-58548394 Msa0820890:CDS 35.0%
TTGGTGCATGTTTGAATTGT+CGG - chr5_3:58548518-58548537 Msa0820890:CDS 35.0%
GTAGAGATTCCTAATAAGTG+AGG - chr5_3:58548780-58548799 Msa0820890:intron 35.0%
CCTAAAATTAAGCGTAGAGT+CGG - chr5_3:58548852-58548871 Msa0820890:intron 35.0%
TTGCAAAGGTGAAATTTGCA+AGG - chr5_3:58548913-58548932 Msa0820890:intron 35.0%
TGGATGCTTGATTAACTTCA+TGG + chr5_3:58549269-58549288 None:intergenic 35.0%
AAAATGGATACGTGGAAAAC+TGG + chr5_3:58549806-58549825 None:intergenic 35.0%
GTTCCATTGACATCTAAATG+TGG + chr5_3:58550826-58550845 None:intergenic 35.0%
GCATGTTAGTTGACAAGTAA+AGG + chr5_3:58550878-58550897 None:intergenic 35.0%
! TAAATTGAGAGTTGGTTAGG+AGG + chr5_3:58550923-58550942 None:intergenic 35.0%
!!! ACACTGTGTGTGTGTTTTTT+GGG + chr5_3:58551017-58551036 None:intergenic 35.0%
!!! TACACTGTGTGTGTGTTTTT+TGG + chr5_3:58551018-58551037 None:intergenic 35.0%
AGGGAGTAATTATCTTCTCT+TGG + chr5_3:58551111-58551130 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr5_3:58551134-58551153 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG - chr5_3:58551135-58551154 Msa0820890:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr5_3:58551265-58551284 Msa0820890:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr5_3:58551269-58551288 Msa0820890:intron 35.0%
!!! GACACTCATTTTGAAACGAA+TGG - chr5_3:58551374-58551393 Msa0820890:intron 35.0%
!! AACGAATGGAGTACTTTTGA+AGG - chr5_3:58551388-58551407 Msa0820890:intron 35.0%
TCTCTGTTGAAAACAACCAA+TGG - chr5_3:58551464-58551483 Msa0820890:intron 35.0%
TTCAAGGAACACAATTCCAT+TGG + chr5_3:58551483-58551502 None:intergenic 35.0%
! GGGTATACTCAGTTATTTCA+AGG + chr5_3:58551499-58551518 None:intergenic 35.0%
AGAATGAGTTGTTCTTTGAC+TGG + chr5_3:58551849-58551868 None:intergenic 35.0%
TGACTATTTGCATTATGCTG+TGG + chr5_3:58552173-58552192 None:intergenic 35.0%
TACTCATTTCATTTGTAGGC+TGG - chr5_3:58553030-58553049 Msa0820890:intron 35.0%
ACTCATTTCATTTGTAGGCT+GGG - chr5_3:58553031-58553050 Msa0820890:intron 35.0%
TTGTCTATGTATGTGTCCAA+TGG + chr5_3:58553087-58553106 None:intergenic 35.0%
ATTACGTCATGAGTTCCATA+TGG + chr5_3:58553117-58553136 None:intergenic 35.0%
GCCATTCAAAAAATAGATGG+TGG - chr5_3:58553312-58553331 Msa0820890:intron 35.0%
!!! GCCACCATCTATTTTTTGAA+TGG + chr5_3:58553316-58553335 None:intergenic 35.0%
! CAAAAAATAGATGGTGGCAA+TGG - chr5_3:58553318-58553337 Msa0820890:intron 35.0%
ACTCACAGTCTAAGTACATT+TGG - chr5_3:58553360-58553379 Msa0820890:intron 35.0%
!! TTAAAAGTGTTGTGGAATCC+GGG + chr5_3:58553518-58553537 None:intergenic 35.0%
!! CTTAAAAGTGTTGTGGAATC+CGG + chr5_3:58553519-58553538 None:intergenic 35.0%
ATCATCAAACATACACCAGA+AGG - chr5_3:58553606-58553625 Msa0820890:intron 35.0%
TTAACCAATGCAGATCCTAA+AGG + chr5_3:58553765-58553784 None:intergenic 35.0%
ACACAAGTCGTTACAAAGAT+TGG + chr5_3:58553822-58553841 None:intergenic 35.0%
! TCCCTCATTTTGAACACTAA+AGG - chr5_3:58553989-58554008 Msa0820890:intron 35.0%
GCCTTTAGTGTTCAAAATGA+GGG + chr5_3:58553993-58554012 None:intergenic 35.0%
GGACCAAATAGAATAGAGAA+TGG + chr5_3:58554305-58554324 None:intergenic 35.0%
TAGTTCAAGGACTAATTCGA+TGG + chr5_3:58554373-58554392 None:intergenic 35.0%
AATCTGTTGCTGCTGAAATA+TGG + chr5_3:58554826-58554845 None:intergenic 35.0%
TGAAGAACATCAACTGTGAT+TGG + chr5_3:58554881-58554900 None:intergenic 35.0%
CTTCATGTAATTGAGCTAGT+TGG - chr5_3:58554896-58554915 Msa0820890:intron 35.0%
ATGAGGAATGAAAAGAGGTA+AGG + chr5_3:58554927-58554946 None:intergenic 35.0%
TCTTCAAACATGAGATTTGG+TGG + chr5_3:58555079-58555098 None:intergenic 35.0%
ATGAAATGGAAGAATGACGA+TGG + chr5_3:58555134-58555153 None:intergenic 35.0%
CATATAAGATGGTCAAGTGA+TGG - chr5_3:58555151-58555170 Msa0820890:intron 35.0%
TTGAATTAGCACGAGTTACA+AGG + chr5_3:58555258-58555277 None:intergenic 35.0%
! CGATTAGCCGTCATATATTT+AGG - chr5_3:58555319-58555338 Msa0820890:five_prime_UTR 35.0%
TTAGCCGTCATATATTTAGG+TGG - chr5_3:58555322-58555341 Msa0820890:five_prime_UTR 35.0%
TGGAAATAACGATGATGAAG+AGG - chr5_3:58555342-58555361 Msa0820890:five_prime_UTR 35.0%
AACGAACGATGAATAATCGT+AGG - chr5_3:58555380-58555399 Msa0820890:five_prime_UTR 35.0%
CAATAAGACGGTAAACAACT+AGG + chr5_3:58555411-58555430 None:intergenic 35.0%
! TGTTTACCGTCTTATTGCTA+AGG - chr5_3:58555414-58555433 Msa0820890:five_prime_UTR 35.0%
GGAAAACATAGAAGAATTGG+AGG - chr5_3:58555435-58555454 Msa0820890:five_prime_UTR 35.0%
!! GGTAATTGGTGATGAAATGT+TGG - chr5_3:58555465-58555484 Msa0820890:five_prime_UTR 35.0%
!! AAAGTGATGGATTAGCAGAA+TGG - chr5_3:58555629-58555648 Msa0820890:five_prime_UTR 35.0%
GATGCACTACTATTAAGATC+AGG + chr5_3:58555700-58555719 None:intergenic 35.0%
GTTACACATCAGTGCTTATC+TGG + chr5_3:58547662-58547681 None:intergenic 40.0%
CAGTGGAAAGAATGAAGAGA+AGG + chr5_3:58547857-58547876 None:intergenic 40.0%
GAGAGAGAGAGAATACTTTG+AGG + chr5_3:58547895-58547914 None:intergenic 40.0%
! ATTGTCTTGTGCAGCTTGTT+TGG - chr5_3:58547952-58547971 Msa0820890:CDS 40.0%
! CATTGCTGGTTGAAAGTTGT+TGG - chr5_3:58548473-58548492 Msa0820890:CDS 40.0%
! CCGACTCTACGCTTAATTTT+AGG + chr5_3:58548855-58548874 None:intergenic 40.0%
AGAGTCGGTATATATGAGGT+TGG - chr5_3:58548867-58548886 Msa0820890:intron 40.0%
TCGGTATATATGAGGTTGGA+AGG - chr5_3:58548871-58548890 Msa0820890:intron 40.0%
!! GTCAAGAATTTTGAGAGCCA+CGG + chr5_3:58548958-58548977 None:intergenic 40.0%
GAAAGTTCTCAAGCACAAGA+TGG - chr5_3:58548983-58549002 Msa0820890:intron 40.0%
CGAGAGTCTAAGTGTTTGTT+TGG + chr5_3:58549182-58549201 None:intergenic 40.0%
CTGTTCGTGAACTTTAAACG+AGG - chr5_3:58549444-58549463 Msa0820890:intron 40.0%
! TCTGTGCATCCAATTTTCGT+CGG - chr5_3:58549730-58549749 Msa0820890:intron 40.0%
AGAAGAAACCCGACGAAAAT+TGG + chr5_3:58549742-58549761 None:intergenic 40.0%
! GTTAACTCATTGGTGCCTAA+GGG - chr5_3:58550508-58550527 Msa0820890:intron 40.0%
CTCCCACATTTAGATGTCAA+TGG - chr5_3:58550820-58550839 Msa0820890:intron 40.0%
! AGAGTTGGTTAGGAGGAAAA+TGG + chr5_3:58550916-58550935 None:intergenic 40.0%
GTGTCTTCGCTTATCATATG+TGG + chr5_3:58550957-58550976 None:intergenic 40.0%
!!! GTGTGTGTTTTTTGGGGATA+TGG + chr5_3:58551010-58551029 None:intergenic 40.0%
!!! CACTGTGTGTGTGTTTTTTG+GGG + chr5_3:58551016-58551035 None:intergenic 40.0%
TTCTCTTGGCATATGCTTCA+AGG + chr5_3:58551097-58551116 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_3:58551130-58551149 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr5_3:58551268-58551287 Msa0820890:intron 40.0%
AGAGAGATATAGAGAGAGAG+GGG + chr5_3:58551881-58551900 None:intergenic 40.0%
GAGAGAGATATAGAGAGAGA+GGG + chr5_3:58551882-58551901 None:intergenic 40.0%
AGAGAGAGATATAGAGAGAG+AGG + chr5_3:58551883-58551902 None:intergenic 40.0%
!! ATAGTCATGAAGGAGTGCTT+TGG + chr5_3:58552111-58552130 None:intergenic 40.0%
TTGGTCTCCTTCCATTAATG+TGG + chr5_3:58552404-58552423 None:intergenic 40.0%
TTGTAGGCTGGGATAATTCT+AGG - chr5_3:58553042-58553061 Msa0820890:intron 40.0%
CTCGTTTGAGCTAAAACCAT+TGG - chr5_3:58553068-58553087 Msa0820890:intron 40.0%
!! TGGATTTCAGCTTGATAACG+AGG - chr5_3:58553193-58553212 Msa0820890:intron 40.0%
ATACCACTACTAACATTGCC+TGG - chr5_3:58553279-58553298 Msa0820890:intron 40.0%
TTTCCAGGCAATGTTAGTAG+TGG + chr5_3:58553285-58553304 None:intergenic 40.0%
! TGAATGGCTTCAACTTTTCC+AGG + chr5_3:58553300-58553319 None:intergenic 40.0%
CAAATCCAAAACTCAGAGCT+TGG - chr5_3:58553411-58553430 Msa0820890:intron 40.0%
!!! ATCTACCAAGCTCTGAGTTT+TGG + chr5_3:58553419-58553438 None:intergenic 40.0%
ATTGTCTTTGTCCTCAGCTT+TGG - chr5_3:58553437-58553456 Msa0820890:intron 40.0%
!! TGCCATAGGAGCTTTTGTTT+TGG - chr5_3:58553716-58553735 Msa0820890:intron 40.0%
!!! GCCATAGGAGCTTTTGTTTT+GGG - chr5_3:58553717-58553736 Msa0820890:intron 40.0%
TCCCAAAACAAAAGCTCCTA+TGG + chr5_3:58553721-58553740 None:intergenic 40.0%
! ATACACAAAGCATCAGTGAC+AGG + chr5_3:58553968-58553987 None:intergenic 40.0%
CGCCTTTAGTGTTCAAAATG+AGG + chr5_3:58553994-58554013 None:intergenic 40.0%
!! TCGATGGATTGAAAGTCGAT+TGG + chr5_3:58554357-58554376 None:intergenic 40.0%
TAACTGGGAGACTAACTTGA+TGG - chr5_3:58554417-58554436 Msa0820890:five_prime_UTR 40.0%
CTATAGTTTAGGGACCAAAG+AGG - chr5_3:58554474-58554493 Msa0820890:intron 40.0%
CTTCACTGACCAATGTACAA+TGG + chr5_3:58554696-58554715 None:intergenic 40.0%
!!! AGCCCATCATGTTCCTTTTT+TGG + chr5_3:58554754-58554773 None:intergenic 40.0%
AGGCAATGAGGAATGAAAAG+AGG + chr5_3:58554932-58554951 None:intergenic 40.0%
ATCCTGATGCTTGTCTTTGA+AGG + chr5_3:58554952-58554971 None:intergenic 40.0%
ACGAGTTACAAGGATTCCAA+CGG + chr5_3:58555248-58555267 None:intergenic 40.0%
AGAAGAATTGGAGGAGTTCA+TGG - chr5_3:58555444-58555463 Msa0820890:five_prime_UTR 40.0%
TTGGAGGAGTTCATGGTAAT+TGG - chr5_3:58555451-58555470 Msa0820890:five_prime_UTR 40.0%
ACTCATTCTCCTCAAAGTGA+TGG - chr5_3:58555616-58555635 Msa0820890:five_prime_UTR 40.0%
TCTGCTAATCCATCACTTTG+AGG + chr5_3:58555628-58555647 None:intergenic 40.0%
TGGAGTGAATTTCCAGAACT+CGG - chr5_3:58555649-58555668 Msa0820890:five_prime_UTR 40.0%
TCACGCATGAATGACCTTAA+AGG - chr5_3:58555745-58555764 Msa0820890:five_prime_UTR 40.0%
CACGCATGAATGACCTTAAA+GGG - chr5_3:58555746-58555765 Msa0820890:five_prime_UTR 40.0%
GGAGATAACTGATATGGCAG+TGG + chr5_3:58547874-58547893 None:intergenic 45.0%
GATCTCTCTAACTGCATTGC+TGG - chr5_3:58548459-58548478 Msa0820890:CDS 45.0%
GTTTGAATTGTCGGCGAGTT+TGG - chr5_3:58548527-58548546 Msa0820890:CDS 45.0%
! CGAGTTTGGTGAAATCACAG+TGG - chr5_3:58548541-58548560 Msa0820890:CDS 45.0%
CTGCAAAGCTTAAAAGGGTG+TGG - chr5_3:58548817-58548836 Msa0820890:intron 45.0%
GCGTAGAGTCGGTATATATG+AGG - chr5_3:58548863-58548882 Msa0820890:intron 45.0%
TATGAGGTTGGAAGGACCAT+TGG - chr5_3:58548879-58548898 Msa0820890:intron 45.0%
TGCAAATGTTCCCTCACCAA+TGG + chr5_3:58548898-58548917 None:intergenic 45.0%
TGGTGAGGGAACATTTGCAA+AGG - chr5_3:58548899-58548918 Msa0820890:intron 45.0%
!! TTTGCAAGGAACTCTGAGAC+AGG - chr5_3:58548927-58548946 Msa0820890:intron 45.0%
ACAAACACTTAGACTCTCGC+AGG - chr5_3:58549183-58549202 Msa0820890:intron 45.0%
! CTGTGCATCCAATTTTCGTC+GGG - chr5_3:58549731-58549750 Msa0820890:intron 45.0%
CTTTAGCATCTCTTTCGCCT+TGG + chr5_3:58550478-58550497 None:intergenic 45.0%
CAAGGCGAAAGAGATGCTAA+AGG - chr5_3:58550476-58550495 Msa0820890:intron 45.0%
! CGTTAACTCATTGGTGCCTA+AGG - chr5_3:58550507-58550526 Msa0820890:intron 45.0%
CAGTTCTCACTACATCCCTT+AGG + chr5_3:58550526-58550545 None:intergenic 45.0%
AGATGTCAATGGAACGAGAC+AGG - chr5_3:58550831-58550850 Msa0820890:intron 45.0%
TTAGGAGGAAAATGGACACG+AGG + chr5_3:58550908-58550927 None:intergenic 45.0%
ACACACACAGTGTACCACTA+AGG - chr5_3:58551024-58551043 Msa0820890:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_3:58551131-58551150 None:intergenic 45.0%
AGATATAGAGAGAGAGGGGT+GGG + chr5_3:58551877-58551896 None:intergenic 45.0%
! GTGCTTTGGTGTAACTGACA+AGG + chr5_3:58552097-58552116 None:intergenic 45.0%
! CCATCTGAAACAATATGGGG+TGG + chr5_3:58552369-58552388 None:intergenic 45.0%
CCACCCCATATTGTTTCAGA+TGG - chr5_3:58552366-58552385 Msa0820890:intron 45.0%
GTTTCAGATGGTTTATGGGG+TGG - chr5_3:58552378-58552397 Msa0820890:intron 45.0%
TTATGGGGTGGCCACATTAA+TGG - chr5_3:58552390-58552409 Msa0820890:intron 45.0%
GGAGTCTCAAAGGTTTGAGA+AGG + chr5_3:58552497-58552516 None:intergenic 45.0%
AGGAATTGAGGGAGTCTCAA+AGG + chr5_3:58552507-58552526 None:intergenic 45.0%
!! TTCAGCTTGATAACGAGGAC+AGG - chr5_3:58553198-58553217 Msa0820890:intron 45.0%
! AGATGGTGGCAATGGAATCT+TGG - chr5_3:58553326-58553345 Msa0820890:intron 45.0%
TATGTCACAGACCAAAGCTG+AGG + chr5_3:58553451-58553470 None:intergenic 45.0%
! TGTTGTTCTTGTGACTAGCC+CGG - chr5_3:58553497-58553516 Msa0820890:intron 45.0%
ACCAGAAGGAAGACATGTGA+AGG - chr5_3:58553620-58553639 Msa0820890:intron 45.0%
TCCTTCACATGTCTTCCTTC+TGG + chr5_3:58553624-58553643 None:intergenic 45.0%
!! ACCTCCTTTAGGATCTGCAT+TGG - chr5_3:58553758-58553777 Msa0820890:intron 45.0%
ACCAATGCAGATCCTAAAGG+AGG + chr5_3:58553762-58553781 None:intergenic 45.0%
GACAGGCATCTTGCAACAAA+GGG + chr5_3:58553951-58553970 None:intergenic 45.0%
TGACAGGCATCTTGCAACAA+AGG + chr5_3:58553952-58553971 None:intergenic 45.0%
! ACTAAAGGCGTGATCGAAGT+TGG - chr5_3:58554004-58554023 Msa0820890:intron 45.0%
TTCTCTCTCTCTCTCCTCTT+TGG + chr5_3:58554491-58554510 None:intergenic 45.0%
GCGTTGGACAACATAAGTGT+AGG + chr5_3:58554850-58554869 None:intergenic 45.0%
!! GTGATTGGTTTCTCTTGCGT+TGG + chr5_3:58554866-58554885 None:intergenic 45.0%
! GCTTGTCTTTGAAGGCAATG+AGG + chr5_3:58554944-58554963 None:intergenic 45.0%
TGCCTTCAAAGACAAGCATC+AGG - chr5_3:58554947-58554966 Msa0820890:intron 45.0%
GCTCATAGATATCGAAAGCG+AGG + chr5_3:58555009-58555028 None:intergenic 45.0%
GAAATTGCTCCATGTTCCGT+TGG - chr5_3:58555229-58555248 Msa0820890:five_prime_UTR 45.0%
ACAAGGATTCCAACGGAACA+TGG + chr5_3:58555241-58555260 None:intergenic 45.0%
TATGACGGCTAATCGAGTAG+TGG + chr5_3:58555314-58555333 None:intergenic 45.0%
!! TTTCCAGAACTCGGTGCTAT+TGG - chr5_3:58555658-58555677 Msa0820890:five_prime_UTR 45.0%
GCATGAATGACCTTAAAGGG+TGG - chr5_3:58555749-58555768 Msa0820890:five_prime_UTR 45.0%
!! TAAATAAAATAAAATATTTG+TGG + chr5_3:58547609-58547628 None:intergenic 5.0%
!!! TAATAATTTATTTTAATATG+AGG - chr5_3:58550578-58550597 Msa0820890:intron 5.0%
!! TATTATAAAAAAATATTGAA+TGG + chr5_3:58551756-58551775 None:intergenic 5.0%
!!! CAATATTTTTTTATAATAAA+TGG - chr5_3:58551758-58551777 Msa0820890:intron 5.0%
!!! ATTATTTGATATTTTTATTT+TGG - chr5_3:58554100-58554119 Msa0820890:intron 5.0%
GTTGGAAGGACCATTGGTGA+GGG - chr5_3:58548885-58548904 Msa0820890:intron 50.0%
! ATGGCTGAGCAGGTGGTTTT+CGG - chr5_3:58549002-58549021 Msa0820890:intron 50.0%
ACAGCTCAGTTCAGCTCGTT+AGG + chr5_3:58549428-58549447 None:intergenic 50.0%
GTTTGAACGCGCGAAGAAGA+AGG + chr5_3:58550179-58550198 None:intergenic 50.0%
AAGCGTGTGTGTGTGATACG+AGG + chr5_3:58550715-58550734 None:intergenic 50.0%
GAGGAAAATGGACACGAGGA+TGG + chr5_3:58550904-58550923 None:intergenic 50.0%
GAGATATAGAGAGAGAGGGG+TGG + chr5_3:58551878-58551897 None:intergenic 50.0%
CGAGGACAGGAAAGAAAGCA+TGG - chr5_3:58553211-58553230 Msa0820890:intron 50.0%
TGGTGGCAATGGAATCTTGG+TGG - chr5_3:58553329-58553348 Msa0820890:intron 50.0%
TTGGGACTGTCTGTTCCTGA+AGG - chr5_3:58553735-58553754 Msa0820890:intron 50.0%
GTTCCTGAAGGACCTCCTTT+AGG - chr5_3:58553747-58553766 Msa0820890:intron 50.0%
GATCCTAAAGGAGGTCCTTC+AGG + chr5_3:58553753-58553772 None:intergenic 50.0%
! TCACCAATAGCACCGAGTTC+TGG + chr5_3:58555664-58555683 None:intergenic 50.0%
GGTTGGAAGGACCATTGGTG+AGG - chr5_3:58548884-58548903 Msa0820890:intron 55.0%
CAAGCACAAGATGGCTGAGC+AGG - chr5_3:58548992-58549011 Msa0820890:intron 55.0%
! AACAGAGAGAGCGCGACATG+AGG + chr5_3:58551452-58551471 None:intergenic 55.0%
GGGGTGGCCACATTAATGGA+AGG - chr5_3:58552394-58552413 Msa0820890:intron 55.0%
!! CTCTGAGACAGGTGAAGCCG+TGG - chr5_3:58548938-58548957 Msa0820890:intron 60.0%
GCACAAGATGGCTGAGCAGG+TGG - chr5_3:58548995-58549014 Msa0820890:intron 60.0%
! AGAGAGAGCGCGACATGAGG+AGG + chr5_3:58551449-58551468 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 58547437 58555780 58547437 ID=Msa0820890;Name=Msa0820890
chr5_3 mRNA 58547437 58555780 58547437 ID=Msa0820890-mRNA-1;Parent=Msa0820890;Name=Msa0820890-mRNA-1;_AED=0.23;_eAED=0.23;_QI=611|0.66|0.75|1|0.33|0.25|4|0|437
chr5_3 exon 58547437 58548579 58547437 ID=Msa0820890-mRNA-1:exon:17805;Parent=Msa0820890-mRNA-1
chr5_3 exon 58554204 58554437 58554204 ID=Msa0820890-mRNA-1:exon:17804;Parent=Msa0820890-mRNA-1
chr5_3 exon 58555166 58555251 58555166 ID=Msa0820890-mRNA-1:exon:17803;Parent=Msa0820890-mRNA-1
chr5_3 exon 58555319 58555780 58555319 ID=Msa0820890-mRNA-1:exon:17802;Parent=Msa0820890-mRNA-1
chr5_3 five_prime_UTR 58555319 58555780 58555319 ID=Msa0820890-mRNA-1:five_prime_utr;Parent=Msa0820890-mRNA-1
chr5_3 five_prime_UTR 58555166 58555251 58555166 ID=Msa0820890-mRNA-1:five_prime_utr;Parent=Msa0820890-mRNA-1
chr5_3 five_prime_UTR 58554375 58554437 58554375 ID=Msa0820890-mRNA-1:five_prime_utr;Parent=Msa0820890-mRNA-1
chr5_3 CDS 58554204 58554374 58554204 ID=Msa0820890-mRNA-1:cds;Parent=Msa0820890-mRNA-1
chr5_3 CDS 58547437 58548579 58547437 ID=Msa0820890-mRNA-1:cds;Parent=Msa0820890-mRNA-1
Gene Sequence

>Msa0820890

ATGAGTCAGCCTAAAATTAAGCGTAGAGTCGGTATATATGAGGTTGGAAGGACCATTGGTGAGGGAACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACAGGTGAAGCCGTGGCTCTCAAAATTCTTGACAAAGAGAAAGTTCTCAAGCACAAGATGGCTGAGCAGATTATTAATAGGAAAACATTTGGAGTGATGATGATAAGTATAATGATTATAGCAACCATTGTACATTGGTCAGTGAAGTTATTATATGATCCATCAAGAAAATATGTTGGATACCAAAAAAGGAACATGATGGGCTTAAAAAGAAACTCAGAGCTAAGAATACTAGTAACACTTCAAAAACAGAACCATATTTCAGCAGCAACAGATTTCCTACACTTATGTTGTCCAACGCAAGAGAAACCAATCACAGTTGATGTTCTTCATGTAATTGAGCTAGTTGGAAGAGCCTTACCTCTTTTCATTCCTCATTGCCTTCAAAGACAAGCATCAGGATCTACTTCATATAAATCATACTCGGACGATGTTATCCTCGCTTTCGATATCTATGAGCATGATAACCAAAATGCAGTATCAATAAACACTTACACAGCAATATCTCCACCAAATCTCATGTTTGAAGATGTTTGTAATCTTGCATTGGACAAAGTTGCAACCATCGTCATTCTTCCATTTCATATAAGATGGTCAAGTGATGGTGTAGTTGAATCTGATGACAAGAAAGTACTAAGAGAATTGAATCGGAGAGTACTCGAAATTGCTCCATGTTCCGTTGGAATCCTTGTAACTCGTGCTAATTCAATGCAAAAACCAACGTCAATTAAATCAGAATATTCCACTACTCGATTAGCCGTCATATATTTAGGTGGAAATAACGATGATGAAGAGGTCTTATGTTTAGCAAAACGAACGATGAATAATCGTAGGCTCAACCTAGTTGTTTACCGTCTTATTGCTAAGGAAAACATAGAAGAATTGGAGGAGTTCATGGTAATTGGTGATGAAATGTTGGAAGAATTTAAACATGCTGAAAATGTGAGGTATAAAGAAGTTTTCACTAAGAATGGATCACAAACAGCATCTTTTCTACGTGAGATTGTGAACAAACATGATTTCTTTATAGTTGGGAGAAGACATGAAACTCATTCTCCTCAAAGTGATGGATTAGCAGAATGGAGTGAATTTCCAGAACTCGGTGCTATTGGTGATTTTCTTGCTTCACCTGATCTTAATAGTAGTGCATCTGTTTTGGTTGTGCAACAACAACTCTCACGCATGAATGACCTTAAAGGGTGGATTTTGTAG
Protein sequence

>Msa0820890

MSQPKIKRRVGIYEVGRTIGEGTFAKVKFARNSETGEAVALKILDKEKVLKHKMAEQIINRKTFGVMMISIMIIATIVHWSVKLLYDPSRKYVGYQKRNMMGLKRNSELRILVTLQKQNHISAATDFLHLCCPTQEKPITVDVLHVIELVGRALPLFIPHCLQRQASGSTSYKSYSDDVILAFDIYEHDNQNAVSINTYTAISPPNLMFEDVCNLALDKVATIVILPFHIRWSSDGVVESDDKKVLRELNRRVLEIAPCSVGILVTRANSMQKPTSIKSEYSTTRLAVIYLGGNNDDEEVLCLAKRTMNNRRLNLVVYRLIAKENIEELEEFMVIGDEMLEEFKHAENVRYKEVFTKNGSQTASFLREIVNKHDFFIVGRRHETHSPQSDGLAEWSEFPELGAIGDFLASPDLNSSASVLVVQQQLSRMNDLKGWIL*