AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215000 MtrunA17_Chr4g0064041 97.027 370 11 0 1 370 1 370 0.0 701
Msa1215000 MtrunA17_Chr6g0483981 51.980 202 67 5 1 184 1 190 3.38e-49 174
Msa1215000 MtrunA17_Chr6g0483981 48.227 141 66 3 190 327 26 162 1.90e-31 125
Msa1215000 MtrunA17_Chr2g0306461 46.875 128 65 3 1 128 1 125 1.71e-31 118
Msa1215000 MtrunA17_Chr2g0306461 47.273 110 56 2 181 290 18 125 6.44e-28 108
Msa1215000 MtrunA17_Chr5g0394321 43.885 139 70 4 29 166 26 157 3.09e-31 117
Msa1215000 MtrunA17_Chr5g0394321 37.931 174 85 4 190 362 25 176 2.17e-30 114
Msa1215000 MtrunA17_Chr4g0033131 44.531 128 66 4 3 128 5 129 1.11e-30 115
Msa1215000 MtrunA17_Chr4g0033131 42.017 119 65 2 185 301 22 138 5.70e-26 102
Msa1215000 MtrunA17_Chr4g0033531 44.531 128 66 4 3 128 5 129 1.11e-30 115
Msa1215000 MtrunA17_Chr4g0033531 42.017 119 65 2 185 301 22 138 5.70e-26 102
Msa1215000 MtrunA17_Chr1g0205701 41.497 147 79 3 190 336 24 163 2.93e-27 106
Msa1215000 MtrunA17_Chr1g0205701 37.278 169 92 5 8 176 8 162 1.91e-25 101
Msa1215000 MtrunA17_Chr3g0132441 49.020 102 47 2 27 128 24 120 7.80e-26 102
Msa1215000 MtrunA17_Chr3g0132441 50.000 100 45 2 191 290 26 120 1.21e-24 99.4
Msa1215000 MtrunA17_Chr3g0132431 39.130 138 64 3 27 164 24 141 2.58e-25 101
Msa1215000 MtrunA17_Chr3g0132431 41.985 131 67 4 180 309 18 140 1.79e-24 99.0
Msa1215000 MtrunA17_Chr3g0132511 48.544 103 48 2 27 128 24 122 5.89e-25 101
Msa1215000 MtrunA17_Chr3g0132511 45.690 116 55 3 176 290 14 122 6.49e-24 98.2
Msa1215000 MtrunA17_Chr3g0132701 48.544 103 48 2 27 128 24 122 6.10e-25 101
Msa1215000 MtrunA17_Chr3g0132701 45.690 116 55 3 176 290 14 122 5.55e-24 98.6
Msa1215000 MtrunA17_Chr8g0387804 36.434 129 79 2 1 128 1 127 1.85e-24 97.1
Msa1215000 MtrunA17_Chr8g0387804 36.634 101 63 1 190 290 28 127 1.83e-16 75.1
Msa1215000 MtrunA17_Chr1g0196801 35.526 152 85 3 190 341 22 160 1.84e-23 95.9
Msa1215000 MtrunA17_Chr1g0196801 32.895 152 83 5 27 178 21 153 1.43e-16 77.0
Msa1215000 MtrunA17_Chr1g0150131 40.000 120 67 2 194 311 29 145 4.43e-23 95.1
Msa1215000 MtrunA17_Chr1g0150131 32.609 138 90 2 13 147 9 146 2.47e-17 79.3
Msa1215000 MtrunA17_Chr8g0335531 40.116 172 85 7 1 170 1 156 1.21e-22 94.0
Msa1215000 MtrunA17_Chr8g0335531 34.615 182 91 6 191 365 24 184 7.17e-20 86.3
Msa1215000 MtrunA17_Chr6g0458331 42.574 101 55 2 191 290 37 135 6.61e-22 91.3
Msa1215000 MtrunA17_Chr6g0458331 37.815 119 65 3 25 136 33 149 4.65e-18 80.9
Msa1215000 MtrunA17_Chr8g0360371 39.130 115 67 2 191 305 24 135 8.80e-22 94.4
Msa1215000 MtrunA17_Chr8g0360371 29.108 213 113 6 5 189 7 209 1.85e-17 82.0
Msa1215000 MtrunA17_Chr2g0331181 36.913 149 72 6 191 336 27 156 1.67e-21 90.9
Msa1215000 MtrunA17_Chr2g0331181 33.775 151 96 3 11 160 9 156 1.40e-18 82.8
Msa1215000 MtrunA17_Chr3g0132411 41.818 110 59 2 191 300 65 169 2.34e-21 90.1
Msa1215000 MtrunA17_Chr3g0132411 37.963 108 62 2 27 134 63 165 1.55e-14 70.9
Msa1215000 MtrunA17_Chr2g0323021 41.964 112 57 3 198 309 33 136 6.36e-21 90.5
Msa1215000 MtrunA17_Chr2g0323021 35.256 156 89 6 9 161 6 152 4.91e-20 87.8
Msa1215000 MtrunA17_Chr1g0211101 34.884 129 69 3 190 307 32 156 2.87e-20 87.4
Msa1215000 MtrunA17_Chr1g0211101 30.345 145 94 4 11 154 16 154 1.67e-16 77.0
Msa1215000 MtrunA17_Chr2g0301431 40.000 120 61 5 11 127 12 123 3.18e-20 85.5
Msa1215000 MtrunA17_Chr2g0301431 39.394 99 53 2 191 289 32 123 8.61e-17 75.9
Msa1215000 MtrunA17_Chr7g0253701 37.795 127 64 4 9 129 6 123 3.65e-20 86.3
Msa1215000 MtrunA17_Chr7g0253701 40.594 101 55 2 191 290 26 122 4.47e-15 72.4
Msa1215000 MtrunA17_Chr7g0253671 37.795 127 64 4 9 129 6 123 3.65e-20 86.3
Msa1215000 MtrunA17_Chr7g0253671 40.594 101 55 2 191 290 26 122 4.47e-15 72.4
Msa1215000 MtrunA17_Chr1g0177341 37.190 121 71 2 11 130 7 123 9.72e-20 85.1
Msa1215000 MtrunA17_Chr1g0177341 41.584 101 54 2 191 290 25 121 4.47e-17 77.8
Msa1215000 MtrunA17_Chr1g0177331 37.190 121 71 2 11 130 7 123 9.72e-20 85.1
Msa1215000 MtrunA17_Chr1g0177331 41.584 101 54 2 191 290 25 121 4.47e-17 77.8
Msa1215000 MtrunA17_Chr8g0335571 43.137 102 51 3 191 290 24 120 1.96e-19 85.5
Msa1215000 MtrunA17_Chr8g0335571 41.935 124 60 5 10 131 10 123 2.03e-18 82.8
Msa1215000 MtrunA17_Chr4g0064031 42.574 101 56 2 25 123 25 125 3.09e-19 84.0
Msa1215000 MtrunA17_Chr4g0064031 37.500 120 71 4 191 307 28 146 1.82e-18 81.6
Msa1215000 MtrunA17_Chr7g0253631 37.500 120 71 1 9 128 6 121 3.45e-19 85.9
Msa1215000 MtrunA17_Chr7g0253631 36.275 102 57 3 191 290 26 121 4.66e-13 68.2
Msa1215000 MtrunA17_Chr7g0253681 37.500 128 64 5 9 129 6 124 4.30e-19 83.6
Msa1215000 MtrunA17_Chr7g0253681 38.261 115 66 2 177 290 13 123 1.87e-16 76.3
Msa1215000 MtrunA17_Chr4g0062341 32.394 142 85 4 191 330 32 164 4.54e-19 84.0
Msa1215000 MtrunA17_Chr4g0062341 32.000 150 87 4 27 174 30 166 1.50e-16 77.0
Msa1215000 MtrunA17_Chr4g0062311 32.394 142 85 4 191 330 32 164 4.54e-19 84.0
Msa1215000 MtrunA17_Chr4g0062311 32.000 150 87 4 27 174 30 166 1.50e-16 77.0
Msa1215000 MtrunA17_Chr2g0317231 37.624 101 61 1 190 290 24 122 4.95e-19 89.0
Msa1215000 MtrunA17_Chr2g0317231 29.457 129 85 3 1 129 1 123 2.80e-12 68.2
Msa1215000 MtrunA17_Chr8g0380711 41.584 101 51 3 190 289 27 120 5.01e-19 82.0
Msa1215000 MtrunA17_Chr8g0380711 42.268 97 50 1 31 127 30 120 2.45e-18 80.1
Msa1215000 MtrunA17_Chr4g0041811 38.235 102 63 0 191 292 32 133 6.56e-19 84.7
Msa1215000 MtrunA17_Chr4g0041811 32.000 100 68 0 30 129 33 132 8.89e-14 70.1
Msa1215000 MtrunA17_Chr2g0324721 33.974 156 94 4 31 185 29 176 7.24e-19 84.0
Msa1215000 MtrunA17_Chr2g0324721 31.953 169 108 4 191 355 27 192 1.84e-18 82.8
Msa1215000 MtrunA17_Chr3g0136871 36.607 112 70 1 194 304 31 142 1.76e-18 82.4
Msa1215000 MtrunA17_Chr3g0136871 28.916 166 96 3 25 190 24 167 6.76e-14 69.3
Msa1215000 MtrunA17_Chr7g0253761 31.737 167 97 4 10 164 7 168 4.76e-18 80.9
Msa1215000 MtrunA17_Chr7g0253761 34.000 100 62 1 191 290 26 121 1.12e-12 65.9
Msa1215000 MtrunA17_Chr7g0253731 35.484 124 65 4 12 129 8 122 5.41e-18 80.5
Msa1215000 MtrunA17_Chr7g0253731 37.624 101 58 2 191 290 25 121 4.60e-14 69.3
Msa1215000 MtrunA17_Chr4g0039721 31.111 135 87 3 191 323 32 162 3.27e-17 79.0
Msa1215000 MtrunA17_Chr4g0039721 31.429 140 85 4 27 163 30 161 1.84e-13 68.2
Msa1215000 MtrunA17_Chr8g0380901 40.000 100 53 2 190 289 27 119 4.10e-17 76.6
Msa1215000 MtrunA17_Chr8g0380901 35.537 121 67 3 7 127 10 119 8.18e-15 70.5
Msa1215000 MtrunA17_Chr3g0125791 37.736 106 59 2 183 288 25 123 4.18e-17 77.0
Msa1215000 MtrunA17_Chr3g0125791 37.624 101 56 2 29 129 33 126 9.16e-15 70.5
Msa1215000 MtrunA17_Chr7g0253641 35.593 118 72 1 12 129 9 122 8.69e-17 79.0
Msa1215000 MtrunA17_Chr7g0253641 37.255 102 56 3 191 290 26 121 7.74e-14 70.5
Msa1215000 MtrunA17_Chr6g0459441 39.423 104 57 4 191 293 26 124 1.18e-16 77.0
Msa1215000 MtrunA17_Chr6g0459441 36.893 103 59 3 27 128 24 121 1.40e-13 68.6
Msa1215000 MtrunA17_Chr8g0385031 33.750 160 92 3 191 337 24 182 2.32e-16 79.0
Msa1215000 MtrunA17_Chr8g0385031 30.151 199 114 6 7 188 6 196 2.41e-15 75.9
Msa1215000 MtrunA17_Chr2g0324711 33.621 116 70 2 191 301 25 138 4.91e-16 78.6
Msa1215000 MtrunA17_Chr2g0324711 28.696 230 132 7 5 213 10 228 1.97e-14 73.9
Msa1215000 MtrunA17_Chr6g0453921 35.606 132 78 3 184 313 31 157 5.11e-16 75.5
Msa1215000 MtrunA17_Chr6g0453921 34.965 143 80 4 8 148 17 148 1.94e-14 70.9
Msa1215000 MtrunA17_Chr6g0481491 36.697 109 64 2 191 299 28 131 5.74e-16 75.9
Msa1215000 MtrunA17_Chr6g0481491 32.203 118 75 2 11 128 10 122 3.59e-15 73.9
Msa1215000 MtrunA17_Chr4g0040291 33.333 150 88 3 31 177 27 167 8.11e-16 75.1
Msa1215000 MtrunA17_Chr4g0040291 31.783 129 83 3 191 318 25 149 7.45e-14 69.3
Msa1215000 MtrunA17_Chr8g0385041 31.606 193 110 7 31 208 27 212 4.10e-15 75.5
Msa1215000 MtrunA17_Chr8g0385041 33.108 148 83 4 191 325 25 169 2.52e-13 70.1
Msa1215000 MtrunA17_Chr2g0319611 36.275 102 63 2 191 290 26 127 5.49e-15 74.3
Msa1215000 MtrunA17_Chr2g0319611 33.913 115 74 2 28 140 25 139 4.28e-13 68.6
Msa1215000 MtrunA17_Chr8g0385021 34.507 142 86 2 191 326 24 164 1.39e-14 73.2
Msa1215000 MtrunA17_Chr8g0385021 27.461 193 121 4 7 188 6 190 1.29e-13 70.5
Msa1215000 MtrunA17_Chr6g0453801 32.877 146 91 3 184 327 28 168 3.08e-14 70.1
Msa1215000 MtrunA17_Chr6g0453801 32.787 122 67 4 9 128 23 131 2.58e-11 62.0
Msa1215000 MtrunA17_Chr3g0125761 36.449 107 61 2 183 289 25 124 6.26e-14 68.2
Msa1215000 MtrunA17_Chr3g0125761 31.746 126 72 4 5 127 10 124 9.60e-13 64.7
Msa1215000 MtrunA17_Chr6g0453791 35.938 128 73 4 187 313 27 146 7.15e-14 69.3
Msa1215000 MtrunA17_Chr1g0188981 33.562 146 88 3 191 327 29 174 1.15e-13 68.9
Msa1215000 MtrunA17_Chr1g0188981 33.333 99 65 1 31 128 31 129 1.26e-12 66.2
Msa1215000 MtrunA17_Chr2g0289741 28.758 153 93 3 9 160 7 144 4.89e-13 66.6
Msa1215000 MtrunA17_Chr2g0289741 29.530 149 95 3 185 332 21 160 1.92e-11 62.4
Msa1215000 MtrunA17_Chr4g0001571 34.375 128 76 3 182 309 23 142 5.09e-13 66.6
Msa1215000 MtrunA17_Chr4g0001571 34.314 102 62 2 27 128 27 123 2.26e-12 64.7
Msa1215000 MtrunA17_Chr4g0073901 30.693 101 69 1 191 290 29 129 8.84e-13 66.2
Msa1215000 MtrunA17_Chr5g0441381 32.051 156 86 6 191 329 34 186 3.89e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215000 AT2G32300.1 41.497 147 82 2 9 155 6 148 1.51e-30 117
Msa1215000 AT2G32300.1 39.716 141 78 2 191 331 26 159 7.10e-24 99.8
Msa1215000 AT2G32300.2 41.497 147 82 2 9 155 36 178 6.22e-30 117
Msa1215000 AT2G32300.2 39.716 141 78 2 191 331 56 189 2.02e-23 99.0
Msa1215000 AT2G26720.1 41.135 141 80 1 1 141 1 138 8.95e-29 111
Msa1215000 AT2G26720.1 38.655 119 70 1 185 303 23 138 1.67e-22 94.4
Msa1215000 AT5G20230.1 46.721 122 63 2 31 151 27 147 1.81e-28 110
Msa1215000 AT5G20230.1 37.430 179 105 3 191 369 25 196 3.48e-28 109
Msa1215000 AT3G17675.1 51.923 104 42 3 27 128 30 127 5.96e-28 107
Msa1215000 AT3G17675.1 40.000 100 56 1 191 290 32 127 2.19e-20 86.7
Msa1215000 AT2G31050.1 39.080 174 97 2 10 177 10 180 9.76e-28 108
Msa1215000 AT2G31050.1 42.017 119 66 1 185 303 23 138 6.42e-25 100
Msa1215000 AT2G25060.1 42.149 121 61 2 192 311 32 144 1.24e-25 102
Msa1215000 AT2G25060.1 39.241 158 77 4 13 163 14 159 2.58e-23 95.9
Msa1215000 AT5G26330.1 46.000 100 52 1 191 290 24 121 1.71e-25 102
Msa1215000 AT5G26330.1 45.455 99 52 1 31 129 26 122 3.14e-22 93.2
Msa1215000 AT1G45063.2 26.780 295 169 6 9 301 9 258 1.74e-25 104
Msa1215000 AT1G45063.1 26.780 295 169 6 9 301 9 258 7.08e-25 104
Msa1215000 AT3G20570.1 38.281 128 78 1 191 318 30 156 1.50e-23 97.4
Msa1215000 AT3G20570.1 34.239 184 117 4 1 183 1 181 2.00e-20 88.6
Msa1215000 AT4G31840.1 34.807 181 84 6 192 369 28 177 8.05e-23 94.7
Msa1215000 AT4G31840.1 31.613 155 98 1 6 160 5 151 4.92e-19 84.3
Msa1215000 AT3G53330.1 27.431 288 153 10 31 290 27 286 1.86e-22 96.7
Msa1215000 AT5G53870.2 38.235 170 86 5 191 347 22 185 1.06e-21 95.5
Msa1215000 AT5G53870.2 36.066 183 101 5 10 188 12 182 1.76e-18 86.3
Msa1215000 AT5G53870.1 38.235 170 86 5 191 347 22 185 1.50e-21 95.1
Msa1215000 AT5G53870.1 36.066 183 101 5 10 188 12 182 2.58e-18 85.9
Msa1215000 AT3G60270.1 41.121 107 58 2 184 290 19 120 1.79e-21 91.3
Msa1215000 AT3G60270.1 42.574 101 53 2 31 131 28 123 2.08e-19 85.5
Msa1215000 AT5G07475.1 38.571 140 71 5 190 319 29 163 2.98e-21 90.9
Msa1215000 AT5G07475.1 40.196 102 56 2 27 128 28 124 5.21e-17 79.0
Msa1215000 AT4G28365.1 32.105 190 111 7 1 188 5 178 5.17e-21 90.1
Msa1215000 AT4G28365.1 34.392 189 95 8 191 368 29 199 3.51e-19 85.1
Msa1215000 AT4G30590.1 34.579 107 69 1 185 290 22 128 8.08e-20 86.7
Msa1215000 AT4G30590.1 33.803 142 87 3 8 145 10 148 5.81e-16 75.9
Msa1215000 AT1G79800.1 37.838 111 66 2 181 290 24 132 3.94e-19 84.7
Msa1215000 AT1G79800.1 32.231 121 76 3 31 150 36 151 2.71e-15 73.9
Msa1215000 AT5G15350.1 38.519 135 76 3 181 313 19 148 4.29e-19 84.3
Msa1215000 AT5G15350.1 33.333 105 63 3 28 130 28 127 8.47e-11 60.8
Msa1215000 AT3G27200.1 35.878 131 71 5 1 129 3 122 6.66e-18 80.9
Msa1215000 AT3G27200.1 36.634 101 58 3 191 290 26 121 9.88e-16 74.7
Msa1215000 AT1G72230.1 34.328 134 83 2 197 330 29 157 9.51e-18 80.9
Msa1215000 AT1G72230.1 31.111 180 107 4 4 183 3 165 2.95e-17 79.3
Msa1215000 AT3G60280.1 38.679 106 60 3 183 288 16 116 4.19e-17 80.1
Msa1215000 AT3G60280.1 37.624 101 58 2 31 131 26 121 4.30e-14 71.2
Msa1215000 AT5G25090.1 32.544 169 101 4 194 362 30 185 5.44e-17 78.6
Msa1215000 AT5G25090.1 36.735 98 62 0 32 129 30 127 7.65e-13 67.0
Msa1215000 AT5G14345.1 33.636 110 70 2 197 305 22 129 6.61e-17 77.4
Msa1215000 AT5G14345.1 34.211 114 67 4 36 148 23 129 2.55e-13 67.4
Msa1215000 AT2G44790.1 37.719 114 60 4 184 295 25 129 1.43e-16 77.8
Msa1215000 AT2G44790.1 40.909 88 49 2 47 132 42 128 2.31e-15 74.7
Msa1215000 AT1G64640.1 36.667 120 74 2 191 309 33 151 2.65e-16 77.0
Msa1215000 AT1G64640.1 31.081 148 94 3 8 153 10 151 1.46e-15 74.7
Msa1215000 AT4G27520.1 34.884 129 79 3 191 317 31 156 5.47e-16 79.0
Msa1215000 AT4G27520.1 33.333 129 82 3 3 131 7 131 9.69e-16 78.2
Msa1215000 AT1G22480.1 40.385 104 57 2 34 137 24 122 3.21e-15 73.6
Msa1215000 AT1G22480.1 39.000 100 56 2 196 295 24 118 1.99e-14 71.2
Msa1215000 AT1G48940.1 36.842 95 56 2 198 290 33 125 8.95e-15 72.4
Msa1215000 AT1G48940.1 31.200 125 81 3 11 132 7 129 1.66e-11 62.8
Msa1215000 AT3G18590.1 35.294 102 62 2 191 290 27 126 9.19e-15 72.4
Msa1215000 AT3G18590.1 32.000 125 78 4 8 129 7 127 3.54e-12 65.1
Msa1215000 AT5G57920.1 29.348 92 65 0 199 290 32 123 3.33e-14 70.9
Msa1215000 AT5G57920.1 27.193 114 81 1 30 141 25 138 3.80e-11 62.0
Msa1215000 AT4G32490.1 33.333 159 93 6 31 188 33 179 4.07e-14 71.2
Msa1215000 AT4G32490.1 28.272 191 102 7 191 355 31 212 1.43e-12 67.0
Msa1215000 AT5G57920.2 28.696 115 80 1 199 311 31 145 5.10e-14 70.1
Msa1215000 AT5G57920.2 27.193 114 81 1 30 141 24 137 9.48e-11 60.8
Msa1215000 AT4G12880.1 36.975 119 68 3 174 290 12 125 7.19e-14 68.6
Msa1215000 AT5G57920.3 27.642 123 87 1 199 319 64 186 8.63e-14 70.5
Msa1215000 AT2G23990.1 30.769 117 77 2 194 309 31 144 1.22e-13 69.7
Msa1215000 AT2G23990.1 32.474 194 123 5 8 199 7 194 1.60e-13 69.3
Msa1215000 AT2G02850.1 34.343 99 58 2 190 288 35 126 2.27e-13 67.0
Msa1215000 AT2G02850.1 32.787 122 74 3 9 129 15 129 3.30e-13 66.6
Msa1215000 AT1G08500.1 34.532 139 72 5 191 311 30 167 7.42e-12 65.1
Msa1215000 AT4G01380.1 35.417 96 59 3 198 291 79 173 1.36e-11 63.9

Find 153 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTTCTTGATTGTTATT+TGG 0.083068 8_1:+76012811 Msa1215000:three_prime_UTR
TTTGATACGTTCCAACATTA+TGG 0.216064 8_1:-76010603 None:intergenic
CTATTTCTTGATTGTTATTT+GGG 0.216861 8_1:+76012812 Msa1215000:three_prime_UTR
TGATTTATTTGTGTGATTCT+TGG 0.220074 8_1:+76012663 Msa1215000:three_prime_UTR
TACTATATCTGTGGTGTTAC+TGG 0.237614 8_1:+76012304 Msa1215000:CDS
CTGTTCATCTACTACAGTTT+TGG 0.258545 8_1:+76012740 Msa1215000:three_prime_UTR
GTTGGTATTTATAGGGAAAA+AGG 0.277208 8_1:-76010668 None:intergenic
TATGTTTCGTTGGTATTTAT+AGG 0.279706 8_1:-76010676 None:intergenic
TTATTTGGGATAGTTGTAAT+TGG 0.287487 8_1:+76012826 Msa1215000:three_prime_UTR
ATGTTTCGTTGGTATTTATA+GGG 0.290046 8_1:-76010675 None:intergenic
CAACATTGATGGAAAGCTTT+TGG 0.291973 8_1:-76012342 None:intergenic
GATGAGATGAGATGCTAATT+AGG 0.295325 8_1:+76012625 Msa1215000:three_prime_UTR
GCCGCGTCTCTTGGAGTTGC+CGG 0.310336 8_1:+76012538 Msa1215000:CDS
AACTTCATTTGTGCCGTTCC+AGG 0.347262 8_1:+76011248 Msa1215000:CDS
CCACGTTGTGTGCATTCAAT+TGG 0.357168 8_1:-76012177 None:intergenic
AACTCCGGTGCCGCGTCTCT+TGG 0.359466 8_1:+76012529 Msa1215000:CDS
TGGGGCAGGTGTAGCGGCCT+TGG 0.370641 8_1:-76011411 None:intergenic
GAATATGCTTTGCGTTTGTT+TGG 0.372537 8_1:-76010750 None:intergenic
TGTAGTGTTCTTAGTGGTCT+CGG 0.374105 8_1:-76010792 None:intergenic
CGCCTCCGGTTCTCCCTCAC+CGG 0.374150 8_1:+76012447 Msa1215000:CDS
AGAGTAACACTTAACAAAAC+TGG 0.383012 8_1:+76012274 Msa1215000:CDS
TGACAGAACCACCTGGAGAC+TGG 0.395337 8_1:-76012492 None:intergenic
GCCACTCCGCCTTCCGCCTC+CGG 0.397842 8_1:+76012433 Msa1215000:CDS
GTGCTTCATTCTATACCAAC+TGG 0.401088 8_1:+76010971 Msa1215000:CDS
ACCCCTTCTTCCCAGTCTCC+AGG 0.402610 8_1:+76012481 Msa1215000:CDS
TCGTTCAATGTCACGGTAGC+TGG 0.403067 8_1:-76011212 None:intergenic
ATGAAAGAACTTAATTTGTA+AGG 0.407461 8_1:-76010703 None:intergenic
TCACCGACGGTGTAAGTAAC+AGG 0.416106 8_1:-76011485 None:intergenic
TAAGCAGCAGCACCGTTAGA+TGG 0.418533 8_1:-76011527 None:intergenic
AAGAACTAAGACACGCTCAT+AGG 0.421558 8_1:-76010567 None:intergenic
GAAGGAGAAGGTGATGTGGC+AGG 0.422952 8_1:-76012382 None:intergenic
TCTCGCAAGTCTTTCAAAGT+TGG 0.423148 8_1:+76011563 Msa1215000:CDS
AGACCCCGGTGAGGGAGAAC+CGG 0.423247 8_1:-76012452 None:intergenic
GACTGGGAAGAAGGGGTGAC+AGG 0.424292 8_1:-76012475 None:intergenic
TTGTTAAGTGTTACTCTCAC+TGG 0.424897 8_1:-76012268 None:intergenic
TGTCCAGCTGAACAATGTCC+TGG 0.428453 8_1:-76011266 None:intergenic
ACCGTGACATTGAACGAAAC+AGG 0.440151 8_1:+76011218 Msa1215000:CDS
CCTGCTCCAGCTCCTGCTAC+TGG 0.441017 8_1:+76011461 Msa1215000:CDS
GTGCAAATGATCCATGGAAC+AGG 0.441402 8_1:-76010897 None:intergenic
GCTACCACTACCAACATTGA+TGG 0.445225 8_1:-76012353 None:intergenic
TTGTAATTGGTAATGCATAT+TGG 0.445798 8_1:+76012839 Msa1215000:three_prime_UTR
AGAATGAAGCACCGTTGGTT+GGG 0.451694 8_1:-76010960 None:intergenic
GCACCGGAGTTCTCAGGAGG+GGG 0.455438 8_1:-76012517 None:intergenic
GGTGGAGAAGCACTTGGAGT+TGG 0.455723 8_1:-76011338 None:intergenic
GTAGGAGCTGGAGTAGCCTT+AGG 0.459132 8_1:-76011359 None:intergenic
GTTACTGGACACTGCTCTGC+AGG 0.461094 8_1:+76012319 Msa1215000:CDS
GCAGGTGTAGCGGCCTTGGT+TGG 0.463363 8_1:-76011407 None:intergenic
GCCTCCGGTTCTCCCTCACC+GGG 0.464351 8_1:+76012448 Msa1215000:CDS
GACGCGGCACCGGAGTTCTC+AGG 0.465593 8_1:-76012523 None:intergenic
AACATTAAGGTTCTTTGCCA+TGG 0.467663 8_1:-76010842 None:intergenic
GTGTAGTGTAGTGTTCTTAG+TGG 0.467698 8_1:-76010798 None:intergenic
CCACCTGGAGACTGGGAAGA+AGG 0.472672 8_1:-76012484 None:intergenic
GTAGTAGATGGTGCTGGGGC+AGG 0.476078 8_1:-76011425 None:intergenic
CCGCGTCTCTTGGAGTTGCC+GGG 0.476568 8_1:+76012539 Msa1215000:CDS
GTTGGAACGTATCAAATTGA+AGG 0.478705 8_1:+76010610 Msa1215000:five_prime_UTR
GAAAGACTTGCGAGAAGCCC+AGG 0.480465 8_1:-76011555 None:intergenic
GCTGGAACAGGGGTAGGAGC+TGG 0.482904 8_1:-76011371 None:intergenic
TCATCGCCTTCTCCTTCCAC+AGG 0.484678 8_1:+76012409 Msa1215000:CDS
CCGTCGGTGACACCATTGGC+TGG 0.488830 8_1:+76011498 Msa1215000:CDS
TAAGTAACAGGTCCAGTAGC+AGG 0.490680 8_1:-76011473 None:intergenic
GACAGAACCACCTGGAGACT+GGG 0.492609 8_1:-76012491 None:intergenic
TTCAAAGTTGGAGACATCCT+TGG 0.494707 8_1:+76011575 Msa1215000:CDS
GTTCCAGGACATTGTTCAGC+TGG 0.499514 8_1:+76011263 Msa1215000:CDS
TCCTGTTTCGTTCAATGTCA+CGG 0.504654 8_1:-76011219 None:intergenic
GAGGGAGAACCGGAGGCGGA+AGG 0.504963 8_1:-76012442 None:intergenic
TAGAATGAAGCACCGTTGGT+TGG 0.509679 8_1:-76010961 None:intergenic
CACCTGGAGACTGGGAAGAA+GGG 0.510075 8_1:-76012483 None:intergenic
CTTTCCATCAATGTTGGTAG+TGG 0.510316 8_1:+76012349 Msa1215000:CDS
GGCGATGAGGCGGAAGGAGA+AGG 0.513509 8_1:-76012394 None:intergenic
GTAGCGGCCTTGGTTGGTGC+CGG 0.513837 8_1:-76011401 None:intergenic
GGTAGCTGGACTGTTTGTTA+AGG 0.513870 8_1:-76011198 None:intergenic
GTGCTGCTGCTTATACAACC+TGG 0.514286 8_1:+76011537 Msa1215000:CDS
TGCAAAGGTTATAAAAGCGT+TGG 0.514287 8_1:+76012916 Msa1215000:three_prime_UTR
GTAAGGACAATATGTTTCGT+TGG 0.514686 8_1:-76010686 None:intergenic
CCAGTAGCAGGAGCTGGAGC+AGG 0.514710 8_1:-76011461 None:intergenic
ACAGGTCCAGTAGCAGGAGC+TGG 0.516512 8_1:-76011467 None:intergenic
AGAACTAAGACACGCTCATA+GGG 0.519705 8_1:-76010566 None:intergenic
AGCAGCACCGTTAGATGGAA+TGG 0.523720 8_1:-76011522 None:intergenic
GAAGCAGTAGTAGATGGTGC+TGG 0.524239 8_1:-76011431 None:intergenic
TCCAAGTGCTTCTCCACCTA+AGG 0.524590 8_1:+76011343 Msa1215000:CDS
GGCGGAGTGGCACCTGTGGA+AGG 0.524949 8_1:-76012421 None:intergenic
GTGGCACCTGTGGAAGGAGA+AGG 0.526612 8_1:-76012415 None:intergenic
AAGCAGTAGTAGATGGTGCT+GGG 0.527160 8_1:-76011430 None:intergenic
CAAAAGCTTTCCATCAATGT+TGG 0.527473 8_1:+76012343 Msa1215000:CDS
AACTCCAAGAGACGCGGCAC+CGG 0.528242 8_1:-76012533 None:intergenic
GTGACAGGAGACCCCGGTGA+GGG 0.529596 8_1:-76012460 None:intergenic
GTAGTGTTCTTAGTGGTCTC+GGG 0.532612 8_1:-76010791 None:intergenic
CGGTGAGGGAGAACCGGAGG+CGG 0.533082 8_1:-76012446 None:intergenic
TGCTGCTGCTTATACAACCT+GGG 0.535411 8_1:+76011538 Msa1215000:CDS
GGGTTGCTGAAAGTTGCAAT+TGG 0.537641 8_1:-76012244 None:intergenic
GGTATAGAATGAAGCACCGT+TGG 0.538174 8_1:-76010965 None:intergenic
AAAAGCACCGGCACCAACCA+AGG 0.541334 8_1:+76011394 Msa1215000:CDS
TGGTGCTGGGGCAGGTGTAG+CGG 0.541610 8_1:-76011417 None:intergenic
GCAGGAGCTGGAGCAGGTGT+TGG 0.542881 8_1:-76011455 None:intergenic
GTGCAAGACTTGAGAGTCGT+TGG 0.544315 8_1:-76010646 None:intergenic
TACACCGTCGGTGACACCAT+TGG 0.546097 8_1:+76011494 Msa1215000:CDS
TTAAGTGTTACTCTCACTGG+TGG 0.550431 8_1:-76012265 None:intergenic
GGAGAAGGCGATGAGGCGGA+AGG 0.552275 8_1:-76012400 None:intergenic
GGAGAACCGGAGGCGGAAGG+CGG 0.556109 8_1:-76012439 None:intergenic
ACCTGGAGACTGGGAAGAAG+GGG 0.556112 8_1:-76012482 None:intergenic
GCCTTAGGTGGAGAAGCACT+TGG 0.556300 8_1:-76011344 None:intergenic
GCAGTGTTCAATTATGCAAG+TGG 0.556563 8_1:+76011107 Msa1215000:intron
AAGGAGAAGGTGATGTGGCA+GGG 0.559165 8_1:-76012381 None:intergenic
GTTGGTGAAGCAGTAGTAGA+TGG 0.562949 8_1:-76011437 None:intergenic
TGGACAACATGATGTTGCTA+AGG 0.564994 8_1:+76011127 Msa1215000:CDS
CCCCGGTGAGGGAGAACCGG+AGG 0.568850 8_1:-76012449 None:intergenic
TGCAGCTGCAATTGAGAGGA+CGG 0.569204 8_1:-76012572 None:intergenic
AGATGGAATGGTCCAGCCAA+TGG 0.572806 8_1:-76011510 None:intergenic
GAGATGAGATGCTAATTAGG+AGG 0.573955 8_1:+76012628 Msa1215000:three_prime_UTR
GGCACCGGAGTTCTCAGGAG+GGG 0.576346 8_1:-76012518 None:intergenic
TTGTTTGTGCAAATGATCCA+TGG 0.576582 8_1:-76010903 None:intergenic
GGCTGGACCATTCCATCTAA+CGG 0.581650 8_1:+76011515 Msa1215000:CDS
CCAGCCAATGGTGTCACCGA+CGG 0.581738 8_1:-76011498 None:intergenic
CCCTGTTCCAGCAAAAGCAC+CGG 0.587423 8_1:+76011382 Msa1215000:CDS
CACCGGAGTTCTCAGGAGGG+GGG 0.588751 8_1:-76012516 None:intergenic
GAGAGTCGTTGGCGTTTACA+CGG 0.589723 8_1:-76010635 None:intergenic
GAAGGGGTGACAGGAGACCC+CGG 0.590847 8_1:-76012466 None:intergenic
TGCTTCATTCTATACCAACT+GGG 0.590943 8_1:+76010972 Msa1215000:CDS
ACCGGAGGCGGAAGGCGGAG+TGG 0.594091 8_1:-76012434 None:intergenic
ACAGCTTACGATAGTTGCAA+TGG 0.598738 8_1:+76011158 Msa1215000:CDS
GCGGCACCGGAGTTCTCAGG+AGG 0.599451 8_1:-76012520 None:intergenic
GTTGCTGCAAACCTGTTCCA+TGG 0.601439 8_1:+76010886 Msa1215000:CDS
TAAGTGTTACTCTCACTGGT+GGG 0.601887 8_1:-76012264 None:intergenic
TTCACTGTAGGCGACACTCT+CGG 0.604689 8_1:+76011009 Msa1215000:CDS
AGCTGAACAATGTCCTGGAA+CGG 0.608366 8_1:-76011261 None:intergenic
GGACCTGTTACTTACACCGT+CGG 0.610193 8_1:+76011482 Msa1215000:CDS
GGAGCTGGAGTAGCCTTAGG+TGG 0.618274 8_1:-76011356 None:intergenic
CCTTCTTCCCAGTCTCCAGG+TGG 0.619545 8_1:+76012484 Msa1215000:CDS
GGAAGGCGGAGTGGCACCTG+TGG 0.619926 8_1:-76012425 None:intergenic
CGGCACCGGAGTTCTCAGGA+GGG 0.620355 8_1:-76012519 None:intergenic
AAAATGCAGCTGCAATTGAG+AGG 0.622849 8_1:-76012576 None:intergenic
GGAAGGAGAAGGCGATGAGG+CGG 0.623870 8_1:-76012404 None:intergenic
GAGAGTGTCGCCTACAGTGA+AGG 0.626729 8_1:-76011007 None:intergenic
GGTACTCATTACTATATCTG+TGG 0.633939 8_1:+76012295 Msa1215000:CDS
CCCGGCAACTCCAAGAGACG+CGG 0.637522 8_1:-76012539 None:intergenic
GAGGACGGTGACAAATAACC+CGG 0.639473 8_1:-76012557 None:intergenic
TCCAACAAAACCTTCACTGT+AGG 0.644441 8_1:+76010997 Msa1215000:CDS
CCAATTGAATGCACACAACG+TGG 0.647358 8_1:+76012177 Msa1215000:CDS
ATTTGCACAAACAAGACATG+TGG 0.650443 8_1:+76010912 Msa1215000:CDS
GGTGACAGGAGACCCCGGTG+AGG 0.653268 8_1:-76012461 None:intergenic
ACAGCGGACTATCAGAATCA+CGG 0.656084 8_1:+76012877 Msa1215000:three_prime_UTR
CATGTGGTTGGTGATACCAC+AGG 0.660891 8_1:+76010928 Msa1215000:CDS
CTACACTACACAAACAACCA+TGG 0.662752 8_1:+76010825 Msa1215000:exon
GGCGGAAGGAGAAGGTGATG+TGG 0.668642 8_1:-76012386 None:intergenic
CAACGTGGAAGAAGTGACAA+AGG 0.672668 8_1:+76012192 Msa1215000:CDS
GGTTGGACTATCCCAACCAA+CGG 0.674561 8_1:+76010949 Msa1215000:CDS
AGCAGTAGTAGATGGTGCTG+GGG 0.674917 8_1:-76011429 None:intergenic
TGTGGAAGGAGAAGGCGATG+AGG 0.677050 8_1:-76012407 None:intergenic
GCACAAACAAGACATGTGGT+TGG 0.685878 8_1:+76010916 Msa1215000:CDS
GGTTGGGATAGTCCAACCTG+TGG 0.687809 8_1:-76010944 None:intergenic
TGGTTGGTGATACCACAGGT+TGG 0.725223 8_1:+76010932 Msa1215000:CDS
CCTCCGGTTCTCCCTCACCG+GGG 0.753255 8_1:+76012449 Msa1215000:CDS
GTGTATGATTGATATCACAG+CGG 0.797976 8_1:+76012861 Msa1215000:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCATATTCAAATTAG+TGG - chr8_1:76011874-76011893 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + chr8_1:76012777-76012796 Msa1215000:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + chr8_1:76012778-76012797 Msa1215000:three_prime_UTR 15.0%
!! ATTAATCATATTCAAATTAG+TGG - chr8_1:76011874-76011893 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + chr8_1:76012777-76012796 Msa1215000:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + chr8_1:76012778-76012797 Msa1215000:three_prime_UTR 15.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - chr8_1:76010706-76010725 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - chr8_1:76011814-76011833 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - chr8_1:76011815-76011834 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + chr8_1:76011930-76011949 Msa1215000:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - chr8_1:76011968-76011987 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + chr8_1:76012112-76012131 Msa1215000:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + chr8_1:76012693-76012712 Msa1215000:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + chr8_1:76012811-76012830 Msa1215000:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + chr8_1:76012812-76012831 Msa1215000:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + chr8_1:76012901-76012920 Msa1215000:three_prime_UTR 20.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - chr8_1:76010706-76010725 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - chr8_1:76011814-76011833 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - chr8_1:76011815-76011834 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + chr8_1:76011930-76011949 Msa1215000:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - chr8_1:76011968-76011987 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + chr8_1:76012112-76012131 Msa1215000:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + chr8_1:76012693-76012712 Msa1215000:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + chr8_1:76012811-76012830 Msa1215000:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + chr8_1:76012812-76012831 Msa1215000:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + chr8_1:76012901-76012920 Msa1215000:three_prime_UTR 20.0%
! ATGTTTCGTTGGTATTTATA+GGG - chr8_1:76010678-76010697 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - chr8_1:76010679-76010698 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + chr8_1:76010763-76010782 Msa1215000:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + chr8_1:76010764-76010783 Msa1215000:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - chr8_1:76010858-76010877 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - chr8_1:76011055-76011074 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - chr8_1:76011056-76011075 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - chr8_1:76011813-76011832 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + chr8_1:76012044-76012063 Msa1215000:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + chr8_1:76012663-76012682 Msa1215000:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + chr8_1:76012826-76012845 Msa1215000:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + chr8_1:76012839-76012858 Msa1215000:three_prime_UTR 25.0%
! ATGTTTCGTTGGTATTTATA+GGG - chr8_1:76010678-76010697 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - chr8_1:76010679-76010698 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + chr8_1:76010763-76010782 Msa1215000:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + chr8_1:76010764-76010783 Msa1215000:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - chr8_1:76010858-76010877 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - chr8_1:76011055-76011074 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - chr8_1:76011056-76011075 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - chr8_1:76011813-76011832 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + chr8_1:76012044-76012063 Msa1215000:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + chr8_1:76012663-76012682 Msa1215000:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + chr8_1:76012826-76012845 Msa1215000:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + chr8_1:76012839-76012858 Msa1215000:three_prime_UTR 25.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + chr8_1:76010592-76010611 Msa1215000:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - chr8_1:76010606-76010625 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - chr8_1:76010671-76010690 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + chr8_1:76010765-76010784 Msa1215000:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + chr8_1:76011691-76011710 Msa1215000:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + chr8_1:76011692-76011711 Msa1215000:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + chr8_1:76012026-76012045 Msa1215000:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + chr8_1:76012274-76012293 Msa1215000:CDS 30.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + chr8_1:76010592-76010611 Msa1215000:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - chr8_1:76010606-76010625 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - chr8_1:76010671-76010690 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + chr8_1:76010765-76010784 Msa1215000:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + chr8_1:76011691-76011710 Msa1215000:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + chr8_1:76011692-76011711 Msa1215000:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + chr8_1:76012026-76012045 Msa1215000:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + chr8_1:76012274-76012293 Msa1215000:CDS 30.0%
GTTGGAACGTATCAAATTGA+AGG + chr8_1:76010610-76010629 Msa1215000:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - chr8_1:76010689-76010708 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - chr8_1:76010753-76010772 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - chr8_1:76010845-76010864 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - chr8_1:76010906-76010925 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + chr8_1:76010912-76010931 Msa1215000:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + chr8_1:76010972-76010991 Msa1215000:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - chr8_1:76011595-76011614 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + chr8_1:76011698-76011717 Msa1215000:intron 35.0%
ATAGATTACACATTACCCTC+TGG + chr8_1:76011761-76011780 Msa1215000:intron 35.0%
GATACCTAAATTCAACAACC+TGG - chr8_1:76012033-76012052 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - chr8_1:76012271-76012290 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + chr8_1:76012295-76012314 Msa1215000:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + chr8_1:76012304-76012323 Msa1215000:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - chr8_1:76012345-76012364 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + chr8_1:76012343-76012362 Msa1215000:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + chr8_1:76012625-76012644 Msa1215000:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + chr8_1:76012740-76012759 Msa1215000:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + chr8_1:76012861-76012880 Msa1215000:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + chr8_1:76012916-76012935 Msa1215000:three_prime_UTR 35.0%
GTTGGAACGTATCAAATTGA+AGG + chr8_1:76010610-76010629 Msa1215000:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - chr8_1:76010689-76010708 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - chr8_1:76010753-76010772 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - chr8_1:76010845-76010864 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - chr8_1:76010906-76010925 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + chr8_1:76010912-76010931 Msa1215000:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + chr8_1:76010972-76010991 Msa1215000:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - chr8_1:76011595-76011614 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + chr8_1:76011698-76011717 Msa1215000:intron 35.0%
ATAGATTACACATTACCCTC+TGG + chr8_1:76011761-76011780 Msa1215000:intron 35.0%
GATACCTAAATTCAACAACC+TGG - chr8_1:76012033-76012052 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - chr8_1:76012271-76012290 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + chr8_1:76012295-76012314 Msa1215000:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + chr8_1:76012304-76012323 Msa1215000:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - chr8_1:76012345-76012364 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + chr8_1:76012343-76012362 Msa1215000:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + chr8_1:76012625-76012644 Msa1215000:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + chr8_1:76012740-76012759 Msa1215000:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + chr8_1:76012861-76012880 Msa1215000:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + chr8_1:76012916-76012935 Msa1215000:three_prime_UTR 35.0%
AGAACTAAGACACGCTCATA+GGG - chr8_1:76010569-76010588 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - chr8_1:76010570-76010589 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - chr8_1:76010795-76010814 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - chr8_1:76010801-76010820 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + chr8_1:76010825-76010844 Msa1215000:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + chr8_1:76010971-76010990 Msa1215000:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + chr8_1:76010997-76011016 Msa1215000:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + chr8_1:76011107-76011126 Msa1215000:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + chr8_1:76011127-76011146 Msa1215000:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + chr8_1:76011158-76011177 Msa1215000:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - chr8_1:76011222-76011241 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + chr8_1:76011563-76011582 Msa1215000:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + chr8_1:76011575-76011594 Msa1215000:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + chr8_1:76011728-76011747 Msa1215000:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + chr8_1:76011786-76011805 Msa1215000:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + chr8_1:76011807-76011826 Msa1215000:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + chr8_1:76012012-76012031 Msa1215000:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - chr8_1:76012267-76012286 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - chr8_1:76012268-76012287 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + chr8_1:76012349-76012368 Msa1215000:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - chr8_1:76012579-76012598 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + chr8_1:76012628-76012647 Msa1215000:three_prime_UTR 40.0%
AGAACTAAGACACGCTCATA+GGG - chr8_1:76010569-76010588 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - chr8_1:76010570-76010589 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - chr8_1:76010795-76010814 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - chr8_1:76010801-76010820 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + chr8_1:76010825-76010844 Msa1215000:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + chr8_1:76010971-76010990 Msa1215000:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + chr8_1:76010997-76011016 Msa1215000:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + chr8_1:76011107-76011126 Msa1215000:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + chr8_1:76011127-76011146 Msa1215000:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + chr8_1:76011158-76011177 Msa1215000:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - chr8_1:76011222-76011241 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + chr8_1:76011563-76011582 Msa1215000:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + chr8_1:76011575-76011594 Msa1215000:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + chr8_1:76011728-76011747 Msa1215000:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + chr8_1:76011786-76011805 Msa1215000:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + chr8_1:76011807-76011826 Msa1215000:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + chr8_1:76012012-76012031 Msa1215000:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - chr8_1:76012267-76012286 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - chr8_1:76012268-76012287 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + chr8_1:76012349-76012368 Msa1215000:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - chr8_1:76012579-76012598 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + chr8_1:76012628-76012647 Msa1215000:three_prime_UTR 40.0%
GTAGTGTTCTTAGTGGTCTC+GGG - chr8_1:76010794-76010813 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - chr8_1:76010900-76010919 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + chr8_1:76010916-76010935 Msa1215000:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - chr8_1:76010963-76010982 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - chr8_1:76010964-76010983 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - chr8_1:76010968-76010987 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - chr8_1:76011001-76011020 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - chr8_1:76011201-76011220 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + chr8_1:76011218-76011237 Msa1215000:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + chr8_1:76011248-76011267 Msa1215000:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - chr8_1:76011264-76011283 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - chr8_1:76011433-76011452 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - chr8_1:76011440-76011459 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - chr8_1:76011476-76011495 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + chr8_1:76011538-76011557 Msa1215000:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + chr8_1:76011585-76011604 Msa1215000:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - chr8_1:76011713-76011732 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + chr8_1:76011710-76011729 Msa1215000:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - chr8_1:76011779-76011798 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - chr8_1:76011780-76011799 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - chr8_1:76012180-76012199 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + chr8_1:76012177-76012196 Msa1215000:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + chr8_1:76012192-76012211 Msa1215000:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - chr8_1:76012247-76012266 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - chr8_1:76012356-76012375 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + chr8_1:76012877-76012896 Msa1215000:three_prime_UTR 45.0%
GTAGTGTTCTTAGTGGTCTC+GGG - chr8_1:76010794-76010813 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - chr8_1:76010900-76010919 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + chr8_1:76010916-76010935 Msa1215000:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - chr8_1:76010963-76010982 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - chr8_1:76010964-76010983 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - chr8_1:76010968-76010987 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - chr8_1:76011001-76011020 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - chr8_1:76011201-76011220 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + chr8_1:76011218-76011237 Msa1215000:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + chr8_1:76011248-76011267 Msa1215000:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - chr8_1:76011264-76011283 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - chr8_1:76011433-76011452 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - chr8_1:76011440-76011459 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - chr8_1:76011476-76011495 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + chr8_1:76011538-76011557 Msa1215000:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + chr8_1:76011585-76011604 Msa1215000:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - chr8_1:76011713-76011732 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + chr8_1:76011710-76011729 Msa1215000:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - chr8_1:76011779-76011798 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - chr8_1:76011780-76011799 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - chr8_1:76012180-76012199 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + chr8_1:76012177-76012196 Msa1215000:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + chr8_1:76012192-76012211 Msa1215000:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - chr8_1:76012247-76012266 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - chr8_1:76012356-76012375 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + chr8_1:76012877-76012896 Msa1215000:three_prime_UTR 45.0%
GAGAGTCGTTGGCGTTTACA+CGG - chr8_1:76010638-76010657 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - chr8_1:76010649-76010668 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + chr8_1:76010886-76010905 Msa1215000:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + chr8_1:76010928-76010947 Msa1215000:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + chr8_1:76010932-76010951 Msa1215000:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + chr8_1:76010949-76010968 Msa1215000:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - chr8_1:76010989-76011008 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + chr8_1:76011009-76011028 Msa1215000:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - chr8_1:76011215-76011234 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + chr8_1:76011263-76011282 Msa1215000:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - chr8_1:76011269-76011288 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + chr8_1:76011343-76011362 Msa1215000:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - chr8_1:76011432-76011451 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - chr8_1:76011434-76011453 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + chr8_1:76011482-76011501 Msa1215000:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - chr8_1:76011488-76011507 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - chr8_1:76011513-76011532 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + chr8_1:76011515-76011534 Msa1215000:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - chr8_1:76011525-76011544 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - chr8_1:76011530-76011549 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + chr8_1:76011537-76011556 Msa1215000:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - chr8_1:76012384-76012403 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - chr8_1:76012560-76012579 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - chr8_1:76012575-76012594 None:intergenic 50.0%
GAGAGTCGTTGGCGTTTACA+CGG - chr8_1:76010638-76010657 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - chr8_1:76010649-76010668 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + chr8_1:76010886-76010905 Msa1215000:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + chr8_1:76010928-76010947 Msa1215000:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + chr8_1:76010932-76010951 Msa1215000:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + chr8_1:76010949-76010968 Msa1215000:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - chr8_1:76010989-76011008 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + chr8_1:76011009-76011028 Msa1215000:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - chr8_1:76011215-76011234 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + chr8_1:76011263-76011282 Msa1215000:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - chr8_1:76011269-76011288 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + chr8_1:76011343-76011362 Msa1215000:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - chr8_1:76011432-76011451 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - chr8_1:76011434-76011453 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + chr8_1:76011482-76011501 Msa1215000:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - chr8_1:76011488-76011507 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - chr8_1:76011513-76011532 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + chr8_1:76011515-76011534 Msa1215000:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - chr8_1:76011525-76011544 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - chr8_1:76011530-76011549 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + chr8_1:76011537-76011556 Msa1215000:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - chr8_1:76012384-76012403 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - chr8_1:76012560-76012579 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - chr8_1:76012575-76012594 None:intergenic 50.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - chr8_1:76010775-76010794 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - chr8_1:76010947-76010966 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - chr8_1:76011010-76011029 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - chr8_1:76011341-76011360 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - chr8_1:76011347-76011366 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - chr8_1:76011362-76011381 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - chr8_1:76011380-76011399 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - chr8_1:76011384-76011403 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - chr8_1:76011385-76011404 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + chr8_1:76011382-76011401 Msa1215000:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + chr8_1:76011394-76011413 Msa1215000:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + chr8_1:76011494-76011513 Msa1215000:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - chr8_1:76011558-76011577 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + chr8_1:76012319-76012338 Msa1215000:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - chr8_1:76012385-76012404 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - chr8_1:76012410-76012429 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + chr8_1:76012409-76012428 Msa1215000:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - chr8_1:76012485-76012504 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - chr8_1:76012486-76012505 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - chr8_1:76012494-76012513 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - chr8_1:76012495-76012514 None:intergenic 55.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - chr8_1:76010775-76010794 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - chr8_1:76010947-76010966 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - chr8_1:76011010-76011029 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - chr8_1:76011341-76011360 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - chr8_1:76011347-76011366 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - chr8_1:76011362-76011381 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - chr8_1:76011380-76011399 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - chr8_1:76011384-76011403 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - chr8_1:76011385-76011404 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + chr8_1:76011382-76011401 Msa1215000:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + chr8_1:76011394-76011413 Msa1215000:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + chr8_1:76011494-76011513 Msa1215000:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - chr8_1:76011558-76011577 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + chr8_1:76012319-76012338 Msa1215000:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - chr8_1:76012385-76012404 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - chr8_1:76012410-76012429 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + chr8_1:76012409-76012428 Msa1215000:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - chr8_1:76012485-76012504 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - chr8_1:76012486-76012505 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - chr8_1:76012494-76012513 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - chr8_1:76012495-76012514 None:intergenic 55.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - chr8_1:76011359-76011378 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - chr8_1:76011386-76011405 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - chr8_1:76011392-76011411 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - chr8_1:76011428-76011447 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - chr8_1:76011470-76011489 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - chr8_1:76011501-76011520 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - chr8_1:76012389-76012408 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - chr8_1:76012407-76012426 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - chr8_1:76012418-76012437 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - chr8_1:76012478-76012497 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + chr8_1:76012481-76012500 Msa1215000:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - chr8_1:76012487-76012506 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + chr8_1:76012484-76012503 Msa1215000:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - chr8_1:76012536-76012555 None:intergenic 60.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - chr8_1:76011359-76011378 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - chr8_1:76011386-76011405 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - chr8_1:76011392-76011411 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - chr8_1:76011428-76011447 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - chr8_1:76011470-76011489 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - chr8_1:76011501-76011520 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - chr8_1:76012389-76012408 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - chr8_1:76012407-76012426 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - chr8_1:76012418-76012437 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - chr8_1:76012478-76012497 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + chr8_1:76012481-76012500 Msa1215000:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - chr8_1:76012487-76012506 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + chr8_1:76012484-76012503 Msa1215000:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - chr8_1:76012536-76012555 None:intergenic 60.0%
GCTGGAACAGGGGTAGGAGC+TGG - chr8_1:76011374-76011393 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - chr8_1:76011404-76011423 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - chr8_1:76011410-76011429 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - chr8_1:76011420-76011439 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - chr8_1:76011458-76011477 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - chr8_1:76011464-76011483 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + chr8_1:76011461-76011480 Msa1215000:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + chr8_1:76011498-76011517 Msa1215000:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - chr8_1:76012397-76012416 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - chr8_1:76012403-76012422 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - chr8_1:76012455-76012474 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - chr8_1:76012463-76012482 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - chr8_1:76012469-76012488 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + chr8_1:76012514-76012533 Msa1215000:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - chr8_1:76012519-76012538 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - chr8_1:76012520-76012539 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - chr8_1:76012521-76012540 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - chr8_1:76012522-76012541 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + chr8_1:76012529-76012548 Msa1215000:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + chr8_1:76012538-76012557 Msa1215000:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - chr8_1:76012542-76012561 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + chr8_1:76012539-76012558 Msa1215000:CDS 65.0%
GCTGGAACAGGGGTAGGAGC+TGG - chr8_1:76011374-76011393 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - chr8_1:76011404-76011423 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - chr8_1:76011410-76011429 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - chr8_1:76011420-76011439 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - chr8_1:76011458-76011477 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - chr8_1:76011464-76011483 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + chr8_1:76011461-76011480 Msa1215000:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + chr8_1:76011498-76011517 Msa1215000:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - chr8_1:76012397-76012416 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - chr8_1:76012403-76012422 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - chr8_1:76012455-76012474 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - chr8_1:76012463-76012482 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - chr8_1:76012469-76012488 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + chr8_1:76012514-76012533 Msa1215000:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - chr8_1:76012519-76012538 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - chr8_1:76012520-76012539 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - chr8_1:76012521-76012540 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - chr8_1:76012522-76012541 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + chr8_1:76012529-76012548 Msa1215000:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + chr8_1:76012538-76012557 Msa1215000:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - chr8_1:76012542-76012561 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + chr8_1:76012539-76012558 Msa1215000:CDS 65.0%
TGGGGCAGGTGTAGCGGCCT+TGG - chr8_1:76011414-76011433 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - chr8_1:76012424-76012443 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - chr8_1:76012428-76012447 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - chr8_1:76012442-76012461 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - chr8_1:76012445-76012464 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - chr8_1:76012449-76012468 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + chr8_1:76012447-76012466 Msa1215000:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + chr8_1:76012448-76012467 Msa1215000:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + chr8_1:76012449-76012468 Msa1215000:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - chr8_1:76012464-76012483 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - chr8_1:76012502-76012521 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - chr8_1:76012523-76012542 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - chr8_1:76012526-76012545 None:intergenic 70.0%
TGGGGCAGGTGTAGCGGCCT+TGG - chr8_1:76011414-76011433 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - chr8_1:76012424-76012443 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - chr8_1:76012428-76012447 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - chr8_1:76012442-76012461 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - chr8_1:76012445-76012464 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - chr8_1:76012449-76012468 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + chr8_1:76012447-76012466 Msa1215000:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + chr8_1:76012448-76012467 Msa1215000:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + chr8_1:76012449-76012468 Msa1215000:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - chr8_1:76012464-76012483 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - chr8_1:76012502-76012521 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - chr8_1:76012523-76012542 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - chr8_1:76012526-76012545 None:intergenic 70.0%
GCCACTCCGCCTTCCGCCTC+CGG + chr8_1:76012433-76012452 Msa1215000:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - chr8_1:76012437-76012456 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - chr8_1:76012452-76012471 None:intergenic 75.0%
GCCACTCCGCCTTCCGCCTC+CGG + chr8_1:76012433-76012452 Msa1215000:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - chr8_1:76012437-76012456 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - chr8_1:76012452-76012471 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76010552 76012944 76010552 ID=Msa1215000;Name=Msa1215000
chr8_1 mRNA 76010552 76012944 76010552 ID=Msa1215000-mRNA-1;Parent=Msa1215000;Name=Msa1215000-mRNA-1;_AED=0.12;_eAED=0.12;_QI=292|1|1|1|1|1|3|338|370
chr8_1 exon 76010552 76011030 76010552 ID=Msa1215000-mRNA-1:exon:26105;Parent=Msa1215000-mRNA-1
chr8_1 exon 76011111 76011596 76011111 ID=Msa1215000-mRNA-1:exon:26106;Parent=Msa1215000-mRNA-1
chr8_1 exon 76012167 76012944 76012167 ID=Msa1215000-mRNA-1:exon:26107;Parent=Msa1215000-mRNA-1
chr8_1 five_prime_UTR 76010552 76010843 76010552 ID=Msa1215000-mRNA-1:five_prime_utr;Parent=Msa1215000-mRNA-1
chr8_1 CDS 76010844 76011030 76010844 ID=Msa1215000-mRNA-1:cds;Parent=Msa1215000-mRNA-1
chr8_1 CDS 76011111 76011596 76011111 ID=Msa1215000-mRNA-1:cds;Parent=Msa1215000-mRNA-1
chr8_1 CDS 76012167 76012606 76012167 ID=Msa1215000-mRNA-1:cds;Parent=Msa1215000-mRNA-1
chr8_1 three_prime_UTR 76012607 76012944 76012607 ID=Msa1215000-mRNA-1:three_prime_utr;Parent=Msa1215000-mRNA-1
Gene Sequence

>Msa1215000

ATGGCAAAGAACCTTAATGTTCTTGTTTTTGTTCTACTTGCAGTTGCTGCAAACCTGTTCCATGGATCATTTGCACAAACAAGACATGTGGTTGGTGATACCACAGGTTGGACTATCCCAACCAACGGTGCTTCATTCTATACCAACTGGGCTTCCAACAAAACCTTCACTGTAGGCGACACTCTCGTGTTCAATTATGCAAGTGGACAACATGATGTTGCTAAGGTAACAAAAACAGCTTACGATAGTTGCAATGGAGCAAACACACTTTTCACCTTAACAAACAGTCCAGCTACCGTGACATTGAACGAAACAGGACAACAAAACTTCATTTGTGCCGTTCCAGGACATTGTTCAGCTGGACAAAAACTTTCAATTAACGTTGTTAAAGCTTCTACTTCACATGTTTCTGCTCCAACTCCAAGTGCTTCTCCACCTAAGGCTACTCCAGCTCCTACCCCTGTTCCAGCAAAAGCACCGGCACCAACCAAGGCCGCTACACCTGCCCCAGCACCATCTACTACTGCTTCACCAACACCTGCTCCAGCTCCTGCTACTGGACCTGTTACTTACACCGTCGGTGACACCATTGGCTGGACCATTCCATCTAACGGTGCTGCTGCTTATACAACCTGGGCTTCTCGCAAGTCTTTCAAAGTTGGAGACATCCTTGTTTTCAATTTCCAATTGAATGCACACAACGTGGAAGAAGTGACAAAGGAAAAGTATGATTCATGCAACTCAGCTTCTCCAATTGCAACTTTCAGCAACCCACCAGTGAGAGTAACACTTAACAAAACTGGTACTCATTACTATATCTGTGGTGTTACTGGACACTGCTCTGCAGGCCAAAAGCTTTCCATCAATGTTGGTAGTGGTAGCAGCAGCCCTGCCACATCACCTTCTCCTTCCGCCTCATCGCCTTCTCCTTCCACAGGTGCCACTCCGCCTTCCGCCTCCGGTTCTCCCTCACCGGGGTCTCCTGTCACCCCTTCTTCCCAGTCTCCAGGTGGTTCTGTCAGCCCCCCTCCTGAGAACTCCGGTGCCGCGTCTCTTGGAGTTGCCGGGTTATTTGTCACCGTCCTCTCAATTGCAGCTGCATTTTTCTGTTAG
Protein sequence

>Msa1215000

MAKNLNVLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYASGQHDVAKVTKTAYDSCNGANTLFTLTNSPATVTLNETGQQNFICAVPGHCSAGQKLSINVVKASTSHVSAPTPSASPPKATPAPTPVPAKAPAPTKAATPAPAPSTTASPTPAPAPATGPVTYTVGDTIGWTIPSNGAAAYTTWASRKSFKVGDILVFNFQLNAHNVEEVTKEKYDSCNSASPIATFSNPPVRVTLNKTGTHYYICGVTGHCSAGQKLSINVGSGSSSPATSPSPSASSPSPSTGATPPSASGSPSPGSPVTPSSQSPGGSVSPPPENSGAASLGVAGLFVTVLSIAAAFFC*