AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0040550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040550 MtrunA17_Chr1g0205741 97.047 508 15 0 1 508 1 508 0.0 1002
Msa0040550 MtrunA17_Chr4g0044941 48.175 274 138 1 204 473 8 281 3.60e-94 287
Msa0040550 MtrunA17_Chr6g0479311 32.653 490 268 18 28 500 29 473 1.89e-61 210
Msa0040550 MtrunA17_Chr7g0263591 31.992 522 284 26 24 503 31 523 1.72e-50 185
Msa0040550 MtrunA17_Chr1g0181731 31.346 520 302 22 18 503 21 519 2.48e-49 182
Msa0040550 MtrunA17_Chr3g0123141 28.516 519 305 19 28 500 28 526 3.33e-49 181
Msa0040550 MtrunA17_Chr6g0487571 31.288 489 299 19 2 464 4 481 1.01e-48 180
Msa0040550 MtrunA17_Chr4g0044931 48.649 185 90 4 25 207 4 185 5.86e-48 164
Msa0040550 MtrunA17_Chr8g0340871 30.285 492 293 22 3 464 12 483 6.27e-46 172
Msa0040550 MtrunA17_Chr8g0341151 30.171 527 275 25 2 490 4 475 1.64e-45 171
Msa0040550 MtrunA17_Chr2g0282601 30.740 527 310 25 3 488 1 513 1.00e-43 163
Msa0040550 MtrunA17_Chr2g0330591 30.303 495 286 25 3 464 8 476 4.51e-43 163
Msa0040550 MtrunA17_Chr8g0340931 28.980 490 286 21 25 490 29 480 2.40e-42 161
Msa0040550 MtrunA17_Chr8g0340891 30.143 491 295 23 1 464 8 477 7.31e-42 160
Msa0040550 MtrunA17_Chr8g0341231 28.820 517 280 26 25 500 50 519 5.10e-41 155
Msa0040550 MtrunA17_Chr8g0340941 29.435 496 274 25 25 490 26 475 1.30e-40 153
Msa0040550 MtrunA17_Chr8g0340881 28.381 525 293 22 1 490 8 484 4.14e-40 155
Msa0040550 MtrunA17_Chr8g0340911 28.738 515 298 23 1 489 8 479 3.67e-39 152
Msa0040550 MtrunA17_Chr5g0422481 29.609 537 333 20 7 503 17 548 9.56e-39 149
Msa0040550 MtrunA17_Chr8g0347661 29.697 495 279 24 25 490 33 487 3.80e-38 149
Msa0040550 MtrunA17_Chr5g0411631 29.138 429 265 13 68 478 81 488 7.52e-37 145
Msa0040550 MtrunA17_Chr8g0341061 27.027 555 314 24 7 491 27 560 9.66e-36 141
Msa0040550 MtrunA17_Chr8g0341011 27.677 495 283 23 25 490 33 481 1.81e-35 141
Msa0040550 MtrunA17_Chr7g0236881 27.850 535 321 19 4 500 9 516 1.15e-34 138
Msa0040550 MtrunA17_Chr8g0341141 27.602 442 276 17 25 438 28 453 8.33e-34 134
Msa0040550 MtrunA17_Chr1g0198681 26.747 501 323 17 26 493 38 527 5.36e-33 132
Msa0040550 MtrunA17_Chr8g0358831 28.929 439 238 21 43 464 64 445 9.67e-33 132
Msa0040550 MtrunA17_Chr8g0341091 25.859 495 288 22 25 464 55 525 1.70e-29 122
Msa0040550 MtrunA17_Chr8g0341101 24.802 504 309 21 17 468 50 535 7.06e-26 112
Msa0040550 MtrunA17_Chr8g0341351 26.471 374 210 19 19 356 37 381 4.13e-23 101
Msa0040550 MtrunA17_Chr6g0487561 27.568 370 232 15 5 350 16 373 2.80e-21 95.9
Msa0040550 MtrunA17_Chr5g0413291 42.143 140 67 5 356 488 34 166 4.63e-20 93.6
Msa0040550 MtrunA17_Chr6g0456231 41.606 137 72 4 356 488 34 166 7.97e-20 92.8
Msa0040550 MtrunA17_Chr8g0341271 26.644 289 188 12 67 345 8 282 3.64e-19 88.2
Msa0040550 MtrunA17_Chr4g0073471 42.143 140 67 4 356 488 29 161 6.45e-19 90.1
Msa0040550 MtrunA17_Chr3g0113221 42.029 138 69 5 356 488 37 168 7.16e-19 90.5
Msa0040550 MtrunA17_Chr7g0258411 38.776 147 75 6 370 508 30 169 1.65e-18 85.5
Msa0040550 MtrunA17_Chr8g0341111 35.135 148 94 2 319 464 237 384 3.04e-18 88.2
Msa0040550 MtrunA17_Chr8g0385051 43.548 124 59 4 369 488 52 168 3.31e-18 87.8
Msa0040550 MtrunA17_Chr7g0220741 39.873 158 86 5 356 508 36 189 9.84e-18 86.3
Msa0040550 MtrunA17_Chr5g0408611 39.007 141 80 4 347 485 25 161 1.68e-17 86.3
Msa0040550 MtrunA17_Chr8g0363381 36.257 171 98 5 345 508 38 204 2.00e-17 81.6
Msa0040550 MtrunA17_Chr8g0363251 35.260 173 97 6 345 508 42 208 4.52e-17 80.9
Msa0040550 MtrunA17_Chr8g0363631 33.728 169 100 5 345 505 42 206 6.54e-17 80.5
Msa0040550 MtrunA17_Chr6g0464211 38.255 149 80 5 345 488 35 176 9.25e-17 84.0
Msa0040550 MtrunA17_Chr8g0363261 36.471 170 97 5 346 508 22 187 1.08e-16 82.0
Msa0040550 MtrunA17_Chr5g0408431 40.606 165 84 6 345 502 34 191 1.16e-16 83.6
Msa0040550 MtrunA17_Chr8g0363311 33.136 169 101 5 345 505 42 206 1.53e-16 79.3
Msa0040550 MtrunA17_Chr4g0052921 42.276 123 64 3 373 490 55 175 2.83e-16 82.4
Msa0040550 MtrunA17_Chr5g0423871 34.783 161 101 3 318 474 7 167 2.86e-16 77.4
Msa0040550 MtrunA17_Chr8g0362951 34.667 150 88 4 345 488 21 166 2.92e-16 78.2
Msa0040550 MtrunA17_Chr3g0108351 32.843 204 94 8 339 508 27 221 2.96e-16 82.0
Msa0040550 MtrunA17_Chr2g0284161 34.416 154 93 3 342 488 22 174 3.14e-16 79.3
Msa0040550 MtrunA17_Chr8g0362881 33.918 171 102 5 345 508 21 187 3.74e-16 77.8
Msa0040550 MtrunA17_Chr5g0407241 40.789 152 78 6 342 488 38 182 4.20e-16 81.6
Msa0040550 MtrunA17_Chr5g0440231 36.170 141 86 3 370 508 45 183 4.97e-16 81.6
Msa0040550 MtrunA17_Chr5g0408581 38.667 150 76 6 346 488 37 177 5.88e-16 81.3
Msa0040550 MtrunA17_Chr5g0408621 32.967 182 90 5 356 508 78 256 6.49e-16 81.3
Msa0040550 MtrunA17_Chr8g0360851 37.500 144 80 4 351 488 30 169 9.94e-16 80.5
Msa0040550 MtrunA17_Chr8g0369211 39.161 143 77 5 352 490 24 160 1.15e-15 80.1
Msa0040550 MtrunA17_Chr8g0386631 33.333 162 92 6 354 505 26 181 1.30e-15 79.7
Msa0040550 MtrunA17_Chr2g0291501 34.254 181 84 6 351 502 23 197 1.34e-15 80.1
Msa0040550 MtrunA17_Chr4g0032941 33.553 152 78 6 356 488 28 175 1.43e-15 78.2
Msa0040550 MtrunA17_Chr5g0423121 40.000 120 66 3 385 502 57 172 1.48e-15 79.7
Msa0040550 MtrunA17_Chr8g0340961 25.876 371 207 19 1 343 3 333 1.52e-15 77.8
Msa0040550 MtrunA17_Chr5g0440221 36.111 144 83 5 370 508 44 183 2.11e-15 79.7
Msa0040550 MtrunA17_Chr5g0408811 39.394 165 86 6 345 502 11 168 2.95e-15 79.0
Msa0040550 MtrunA17_Chr5g0440211 39.098 133 73 4 378 508 58 184 4.67e-15 78.6
Msa0040550 MtrunA17_Chr2g0284101 41.727 139 66 6 375 508 64 192 5.05e-15 77.8
Msa0040550 MtrunA17_Chr6g0476611 39.474 114 63 3 376 488 55 163 5.09e-15 77.8
Msa0040550 MtrunA17_Chr5g0409241 40.972 144 73 5 347 485 29 165 5.52e-15 77.8
Msa0040550 MtrunA17_Chr5g0408561 31.765 170 78 7 346 485 25 186 6.42e-15 76.6
Msa0040550 MtrunA17_Chr8g0363061 32.749 171 104 5 345 508 21 187 6.60e-15 77.8
Msa0040550 MtrunA17_Chr8g0362931 36.000 150 86 4 345 488 41 186 7.05e-15 77.8
Msa0040550 MtrunA17_Chr1g0176281 34.483 145 85 4 350 488 27 167 9.46e-15 73.6
Msa0040550 MtrunA17_Chr1g0176291 34.483 145 85 4 350 488 27 167 9.46e-15 73.6
Msa0040550 MtrunA17_Chr2g0278861 35.374 147 80 5 352 490 25 164 1.03e-14 77.0
Msa0040550 MtrunA17_Chr6g0488781 33.333 159 94 7 356 505 33 188 1.27e-14 73.6
Msa0040550 MtrunA17_Chr1g0151041 33.520 179 83 6 362 508 3 177 1.33e-14 77.0
Msa0040550 MtrunA17_Chr4g0051961 35.294 136 83 4 356 488 32 165 1.53e-14 76.6
Msa0040550 MtrunA17_Chr8g0369221 37.063 143 80 5 352 490 24 160 1.60e-14 74.7
Msa0040550 MtrunA17_Chr8g0363111 36.806 144 81 4 351 488 27 166 1.84e-14 76.6
Msa0040550 MtrunA17_Chr6g0464141 30.994 171 85 4 345 486 32 198 1.96e-14 76.3
Msa0040550 MtrunA17_Chr1g0197051 38.281 128 70 4 378 502 53 174 2.02e-14 76.3
Msa0040550 MtrunA17_Chr1g0197051 34.615 130 73 2 371 488 53 182 1.24e-11 67.4
Msa0040550 MtrunA17_Chr1g0204461 36.691 139 74 5 359 488 44 177 2.57e-14 75.9
Msa0040550 MtrunA17_Chr2g0330621 32.683 205 110 9 236 423 9 202 3.14e-14 71.6
Msa0040550 MtrunA17_Chr6g0464181 33.133 166 97 6 345 503 29 187 3.78e-14 73.9
Msa0040550 MtrunA17_Chr5g0393671 36.364 132 80 3 359 488 31 160 4.83e-14 71.2
Msa0040550 MtrunA17_Chr2g0323941 40.426 141 67 8 352 485 39 169 6.42e-14 74.7
Msa0040550 MtrunA17_Chr2g0283111 32.836 201 94 8 343 508 16 210 8.91e-14 74.3
Msa0040550 MtrunA17_Chr5g0440191 36.735 147 78 6 370 508 45 184 9.65e-14 74.3
Msa0040550 MtrunA17_Chr2g0296591 40.952 105 60 2 385 488 58 161 1.60e-13 73.6
Msa0040550 MtrunA17_Chr1g0201241 33.929 168 81 4 369 508 41 206 1.94e-13 73.2
Msa0040550 MtrunA17_Chr4g0060011 34.127 126 81 2 385 508 58 183 1.98e-13 72.8
Msa0040550 MtrunA17_Chr4g0037561 35.433 127 76 4 385 508 60 183 2.02e-13 72.8
Msa0040550 MtrunA17_Chr1g0207531 34.752 141 88 3 352 490 26 164 2.24e-13 69.3
Msa0040550 MtrunA17_Chr1g0169841 37.226 137 76 4 377 508 62 193 2.25e-13 73.2
Msa0040550 MtrunA17_Chr2g0283061 37.037 135 76 5 357 488 2 130 2.54e-13 72.0
Msa0040550 MtrunA17_Chr6g0464151 33.557 149 87 5 345 488 35 176 2.84e-13 69.7
Msa0040550 MtrunA17_Chr5g0418721 32.240 183 94 6 351 503 26 208 3.38e-13 70.9
Msa0040550 MtrunA17_Chr5g0403401 32.432 185 87 6 356 508 31 209 3.46e-13 72.4
Msa0040550 MtrunA17_Chr5g0423881 27.479 353 201 17 28 346 66 397 3.55e-13 71.2
Msa0040550 MtrunA17_Chr5g0400681 39.683 126 72 3 385 508 57 180 3.71e-13 72.4
Msa0040550 MtrunA17_Chr6g0464171 36.471 170 95 6 345 508 35 197 3.89e-13 72.4
Msa0040550 MtrunA17_Chr8g0367351 34.783 138 81 4 356 488 38 171 4.20e-13 72.0
Msa0040550 MtrunA17_Chr8g0362861 30.857 175 87 4 345 489 21 191 4.23e-13 68.6
Msa0040550 MtrunA17_Chr4g0053221 41.346 104 57 2 386 488 58 158 4.43e-13 71.6
Msa0040550 MtrunA17_Chr3g0123891 35.821 134 78 4 359 488 32 161 4.52e-13 71.6
Msa0040550 MtrunA17_Chr3g0123891 34.109 129 74 3 371 488 57 185 9.60e-11 64.3
Msa0040550 MtrunA17_Chr8g0380941 30.570 193 70 6 354 488 35 221 4.53e-13 72.0
Msa0040550 MtrunA17_Chr5g0404961 34.000 150 83 5 351 486 21 168 4.98e-13 70.9
Msa0040550 MtrunA17_Chr2g0300201 34.899 149 85 5 345 488 35 176 5.80e-13 71.6
Msa0040550 MtrunA17_Chr8g0366461 42.857 105 56 3 386 488 68 170 5.82e-13 71.6
Msa0040550 MtrunA17_Chr4g0022331 51.429 70 34 0 417 486 231 300 6.10e-13 71.6
Msa0040550 MtrunA17_Chr4g0022331 42.222 90 43 4 374 461 347 429 1.25e-12 70.5
Msa0040550 MtrunA17_Chr4g0049181 29.101 189 92 5 351 504 46 227 6.45e-13 71.2
Msa0040550 MtrunA17_Chr1g0165281 42.400 125 57 7 374 490 91 208 7.88e-13 71.2
Msa0040550 MtrunA17_Chr1g0165241 42.400 125 57 7 374 490 91 208 7.88e-13 71.2
Msa0040550 MtrunA17_Chr1g0165311 42.400 125 57 7 374 490 91 208 7.88e-13 71.2
Msa0040550 MtrunA17_Chr8g0363531 29.744 195 102 5 345 508 41 231 7.89e-13 69.3
Msa0040550 MtrunA17_Chr7g0237821 43.119 109 60 2 402 508 486 594 7.92e-13 71.2
Msa0040550 MtrunA17_Chr0c09g0493541 39.216 102 59 2 385 484 69 169 9.44e-13 68.6
Msa0040550 MtrunA17_Chr8g0363451 29.744 195 102 5 345 508 41 231 9.74e-13 69.3
Msa0040550 MtrunA17_Chr5g0436921 33.803 142 81 4 352 486 24 159 1.07e-12 70.9
Msa0040550 MtrunA17_Chr5g0436841 34.959 123 75 4 385 503 110 231 1.21e-12 70.9
Msa0040550 MtrunA17_Chr7g0245221 29.379 177 89 6 345 488 20 193 1.24e-12 70.5
Msa0040550 MtrunA17_Chr7g0249841 29.480 173 81 5 356 493 32 198 1.25e-12 70.5
Msa0040550 MtrunA17_Chr2g0277081 34.921 126 76 3 385 508 58 179 1.26e-12 70.5
Msa0040550 MtrunA17_Chr1g0196031 32.143 140 82 5 356 488 74 207 1.69e-12 70.1
Msa0040550 MtrunA17_Chr3g0134221 39.048 105 61 2 386 489 81 183 1.85e-12 69.7
Msa0040550 MtrunA17_Chr2g0296601 40.000 105 61 2 385 488 58 161 1.94e-12 70.1
Msa0040550 MtrunA17_Chr2g0278871 39.823 113 59 3 377 488 62 166 2.16e-12 69.7
Msa0040550 MtrunA17_Chr5g0436941 33.803 142 81 4 352 486 24 159 2.31e-12 69.7
Msa0040550 MtrunA17_Chr1g0159861 33.803 142 81 4 352 486 38 173 2.40e-12 65.5
Msa0040550 MtrunA17_Chr7g0221711 29.240 171 85 8 351 488 26 193 2.42e-12 69.7
Msa0040550 MtrunA17_Chr4g0000081 29.327 208 89 6 347 502 20 221 2.86e-12 69.3
Msa0040550 MtrunA17_Chr4g0058761 36.522 115 70 2 397 508 94 208 3.21e-12 69.3
Msa0040550 MtrunA17_Chr7g0265601 35.971 139 79 6 373 508 50 181 3.53e-12 68.9
Msa0040550 MtrunA17_Chr4g0058861 34.899 149 89 4 345 489 24 168 3.78e-12 68.9
Msa0040550 MtrunA17_Chr3g0121971 41.667 96 47 4 374 467 351 439 4.38e-12 68.9
Msa0040550 MtrunA17_Chr3g0121971 32.886 149 93 3 331 478 6 148 2.36e-11 66.6
Msa0040550 MtrunA17_Chr5g0408801 34.228 149 86 5 345 488 35 176 4.75e-12 68.9
Msa0040550 MtrunA17_Chr5g0398741 32.857 140 66 4 374 488 48 184 4.84e-12 68.6
Msa0040550 MtrunA17_Chr5g0440621 36.842 133 80 3 359 489 31 161 5.28e-12 65.5
Msa0040550 MtrunA17_Chr2g0292521 30.303 165 94 6 346 497 16 172 5.47e-12 68.6
Msa0040550 MtrunA17_Chr1g0209521 35.780 109 62 2 377 485 55 155 5.50e-12 68.2
Msa0040550 MtrunA17_Chr8g0362441 40.000 105 57 3 408 508 8 110 5.78e-12 63.2
Msa0040550 MtrunA17_Chr4g0019861 41.837 98 56 1 389 485 641 738 6.17e-12 68.6
Msa0040550 MtrunA17_Chr5g0436861 36.275 102 63 2 385 485 62 162 7.21e-12 68.2
Msa0040550 MtrunA17_Chr5g0436861 38.136 118 70 2 394 508 166 283 5.06e-11 65.5
Msa0040550 MtrunA17_Chr1g0200911 33.987 153 96 4 359 508 34 184 8.22e-12 67.8
Msa0040550 MtrunA17_Chr2g0284121 40.000 105 61 2 385 488 72 175 8.32e-12 68.2
Msa0040550 MtrunA17_Chr1g0196341 31.469 143 77 5 356 485 32 166 8.57e-12 67.0
Msa0040550 MtrunA17_Chr5g0409041 35.075 134 79 4 377 508 59 186 8.59e-12 67.8
Msa0040550 MtrunA17_Chr8g0361231 32.298 161 101 5 352 508 31 187 9.99e-12 67.8
Msa0040550 MtrunA17_Chr8g0380951 33.103 145 81 7 354 488 35 173 1.00e-11 67.8
Msa0040550 MtrunA17_Chr8g0377951 42.222 90 43 4 374 461 342 424 1.06e-11 67.8
Msa0040550 MtrunA17_Chr8g0377951 31.707 123 79 2 356 478 22 139 1.40e-11 67.4
Msa0040550 MtrunA17_Chr8g0377951 42.857 77 43 1 409 485 216 291 4.15e-11 65.9
Msa0040550 MtrunA17_Chr0c03g0490031 33.540 161 92 7 356 508 31 184 1.14e-11 67.4
Msa0040550 MtrunA17_Chr4g0051281 27.907 172 88 5 347 486 27 194 1.33e-11 65.9
Msa0040550 MtrunA17_Chr1g0169981 32.143 168 105 6 347 508 18 182 1.33e-11 65.9
Msa0040550 MtrunA17_Chr8g0363231 30.357 168 83 4 351 488 27 190 1.37e-11 64.7
Msa0040550 MtrunA17_Chr7g0250911 36.585 123 72 3 356 478 32 148 1.63e-11 65.9
Msa0040550 MtrunA17_Chr4g0013511 31.515 165 79 4 354 488 30 190 1.68e-11 65.1
Msa0040550 MtrunA17_Chr5g0405191 31.507 146 94 4 346 488 17 159 2.04e-11 67.0
Msa0040550 MtrunA17_Chr8g0363681 30.286 175 88 4 345 489 22 192 2.06e-11 65.1
Msa0040550 MtrunA17_Chr8g0363001 29.885 174 88 4 345 488 21 190 2.44e-11 63.9
Msa0040550 MtrunA17_Chr3g0140361 40.860 93 54 1 397 488 149 241 2.49e-11 66.6
Msa0040550 MtrunA17_Chr8g0382101 41.758 91 52 1 401 490 90 180 2.61e-11 66.2
Msa0040550 MtrunA17_Chr6g0455851 34.074 135 79 4 359 488 36 165 3.30e-11 66.2
Msa0040550 MtrunA17_Chr8g0388991 28.261 184 98 4 356 508 32 212 3.45e-11 65.9
Msa0040550 MtrunA17_Chr5g0434141 43.902 82 45 1 405 486 224 304 4.20e-11 65.9
Msa0040550 MtrunA17_Chr5g0438071 26.531 196 105 4 346 502 22 217 4.39e-11 65.9
Msa0040550 MtrunA17_Chr8g0363691 30.909 165 80 4 351 485 27 187 4.45e-11 65.9
Msa0040550 MtrunA17_Chr8g0345471 28.495 186 78 5 348 484 23 202 4.66e-11 65.5
Msa0040550 MtrunA17_Chr1g0204931 28.723 188 108 6 323 501 18 188 5.18e-11 64.3
Msa0040550 MtrunA17_Chr8g0392271 39.560 91 47 4 374 462 354 438 5.27e-11 65.5
Msa0040550 MtrunA17_Chr4g0022431 36.957 138 76 6 352 485 31 161 5.40e-11 65.5
Msa0040550 MtrunA17_Chr3g0120441 35.099 151 68 5 375 500 57 202 5.51e-11 64.7
Msa0040550 MtrunA17_Chr3g0087811 30.811 185 82 7 345 487 18 198 5.63e-11 64.3
Msa0040550 MtrunA17_Chr2g0312651 32.911 158 71 5 378 508 63 212 6.32e-11 65.1
Msa0040550 MtrunA17_Chr5g0445721 31.159 138 81 4 353 488 3 128 6.43e-11 61.2
Msa0040550 MtrunA17_Chr1g0179521 37.069 116 64 5 373 485 45 154 6.99e-11 64.7
Msa0040550 MtrunA17_Chr5g0408421 35.507 138 80 5 356 488 31 164 7.29e-11 65.1
Msa0040550 MtrunA17_Chr5g0432851 38.571 140 78 6 372 508 66 200 7.71e-11 64.7
Msa0040550 MtrunA17_Chr1g0165221 37.755 98 60 1 389 485 310 407 7.80e-11 65.1
Msa0040550 MtrunA17_Chr5g0439291 39.423 104 61 1 402 503 163 266 8.36e-11 64.7
Msa0040550 MtrunA17_Chr1g0204911 28.723 188 108 6 323 501 18 188 8.53e-11 64.3
Msa0040550 MtrunA17_Chr7g0214121 33.333 153 97 4 359 508 65 215 8.60e-11 62.4
Msa0040550 MtrunA17_Chr7g0233881 32.394 142 67 3 374 490 68 205 8.62e-11 64.7
Msa0040550 MtrunA17_Chr7g0257621 33.333 135 83 5 355 488 26 154 8.95e-11 64.7
Msa0040550 MtrunA17_Chr7g0219371 41.111 90 52 1 397 485 732 821 9.50e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040550 AT3G05990.1 59.350 492 189 5 25 507 27 516 0.0 600
Msa0040550 AT3G19230.1 48.387 496 246 6 17 504 14 507 2.99e-170 491
Msa0040550 AT2G14510.1 31.352 488 292 21 5 464 7 479 4.50e-56 201
Msa0040550 AT2G14510.2 31.352 488 292 21 5 464 15 487 4.86e-56 201
Msa0040550 AT2G14440.1 31.473 448 272 17 38 464 47 480 9.17e-54 195
Msa0040550 AT2G37050.4 32.290 511 297 23 15 494 19 511 2.08e-53 192
Msa0040550 AT2G37050.2 32.290 511 297 23 15 494 19 511 2.17e-53 192
Msa0040550 AT2G37050.3 32.290 511 297 23 15 494 19 511 1.19e-52 192
Msa0040550 AT2G37050.1 32.290 511 297 23 15 494 19 511 1.27e-52 192
Msa0040550 AT1G67720.1 29.724 508 303 20 28 500 29 517 3.29e-52 191
Msa0040550 AT1G28340.1 30.572 507 296 23 19 486 22 511 1.69e-46 171
Msa0040550 AT3G21340.2 28.872 523 318 22 8 500 13 511 3.86e-45 169
Msa0040550 AT3G21340.1 28.872 523 318 22 8 500 13 511 1.28e-44 168
Msa0040550 AT1G51800.1 29.487 468 283 21 25 464 28 476 1.99e-44 168
Msa0040550 AT5G59680.1 28.810 479 287 15 46 507 56 497 2.62e-43 164
Msa0040550 AT1G51850.2 27.766 479 289 15 42 503 48 486 7.91e-43 163
Msa0040550 AT1G51805.1 30.134 448 256 17 69 500 78 484 8.12e-43 163
Msa0040550 AT5G16900.2 29.237 472 288 18 46 487 50 505 8.23e-43 161
Msa0040550 AT2G04300.2 27.955 533 319 21 2 506 7 502 1.39e-42 162
Msa0040550 AT4G29990.2 28.654 520 288 21 18 500 20 493 2.58e-42 161
Msa0040550 AT1G07550.1 29.148 446 279 16 40 464 49 478 3.52e-42 161
Msa0040550 AT4G29990.1 28.983 521 285 22 18 500 20 493 5.03e-42 160
Msa0040550 AT5G16900.1 29.237 472 288 18 46 487 50 505 7.02e-42 160
Msa0040550 AT5G16900.3 29.237 472 288 18 46 487 50 505 7.02e-42 160
Msa0040550 AT2G19190.1 30.636 519 283 23 2 488 9 482 7.33e-42 160
Msa0040550 AT3G46420.1 30.227 440 269 16 46 464 56 478 1.59e-41 159
Msa0040550 AT1G49100.1 29.498 478 292 17 23 471 27 488 2.27e-41 159
Msa0040550 AT5G59670.2 27.961 515 298 20 23 506 25 497 3.14e-41 158
Msa0040550 AT5G59670.1 27.961 515 298 20 23 506 25 497 3.14e-41 158
Msa0040550 AT4G20450.2 27.416 507 310 19 2 464 6 498 1.61e-40 156
Msa0040550 AT1G51890.3 28.626 524 324 23 3 495 1 505 1.63e-40 155
Msa0040550 AT4G20450.1 27.416 507 310 19 2 464 6 498 1.70e-40 156
Msa0040550 AT1G51890.1 28.626 524 324 23 3 495 1 505 2.39e-40 156
Msa0040550 AT1G51890.2 28.626 524 324 23 3 495 1 505 2.84e-40 155
Msa0040550 AT1G51880.1 27.572 486 314 20 3 464 8 479 6.22e-40 154
Msa0040550 AT1G51880.2 27.572 486 314 20 3 464 26 497 8.74e-40 154
Msa0040550 AT1G51820.1 27.044 477 289 16 42 500 48 483 9.08e-40 154
Msa0040550 AT3G46400.1 29.705 441 278 16 43 464 52 479 1.44e-39 154
Msa0040550 AT1G51850.1 27.349 479 271 15 42 503 48 466 1.62e-39 153
Msa0040550 AT1G51880.3 27.542 472 305 19 3 451 26 483 2.42e-39 153
Msa0040550 AT3G46370.2 29.177 401 257 13 79 464 2 390 8.82e-39 151
Msa0040550 AT3G46370.1 29.177 401 257 13 79 464 2 390 8.82e-39 151
Msa0040550 AT3G46340.1 29.841 439 272 17 46 464 59 481 1.36e-38 150
Msa0040550 AT2G28990.2 26.653 499 311 17 24 500 23 488 2.01e-38 150
Msa0040550 AT2G28990.1 26.653 499 311 17 24 500 23 488 2.01e-38 150
Msa0040550 AT4G29450.1 29.701 468 282 20 28 464 30 481 2.08e-38 150
Msa0040550 AT4G29180.3 31.290 473 273 21 25 464 27 480 2.86e-38 150
Msa0040550 AT4G29180.2 31.290 473 273 21 25 464 27 480 3.21e-38 149
Msa0040550 AT2G29000.1 27.505 509 302 18 23 505 27 494 6.15e-38 149
Msa0040550 AT1G05700.2 29.779 497 271 24 25 490 30 479 2.19e-37 147
Msa0040550 AT1G05700.1 29.779 497 271 24 25 490 30 479 3.23e-37 146
Msa0040550 AT1G51910.1 27.642 492 306 20 5 464 7 480 6.06e-37 145
Msa0040550 AT5G59650.1 27.061 473 290 15 46 500 56 491 1.03e-36 145
Msa0040550 AT1G51860.1 28.782 476 300 20 5 454 7 469 1.14e-36 145
Msa0040550 AT2G19230.2 29.536 474 280 23 25 464 29 482 1.32e-36 145
Msa0040550 AT2G19230.1 29.536 474 280 23 25 464 29 482 2.03e-36 144
Msa0040550 AT2G19210.1 28.154 547 290 27 1 500 7 497 2.84e-36 144
Msa0040550 AT1G51790.3 30.271 479 269 26 25 464 28 480 3.45e-36 143
Msa0040550 AT1G51790.1 30.271 479 269 26 25 464 28 480 3.45e-36 143
Msa0040550 AT1G51790.2 30.625 480 266 27 25 464 28 480 3.78e-36 143
Msa0040550 AT1G51805.2 28.883 412 235 16 69 464 78 447 2.76e-35 140
Msa0040550 AT1G25570.1 30.545 514 308 24 26 503 30 530 3.52e-35 139
Msa0040550 AT1G51870.2 27.309 498 310 23 1 464 1 480 5.06e-35 140
Msa0040550 AT3G46330.1 28.636 440 277 18 46 464 57 480 8.93e-35 139
Msa0040550 AT1G07560.1 27.813 471 292 18 24 464 28 480 2.12e-34 138
Msa0040550 AT5G59650.2 26.611 481 290 15 46 500 56 499 6.74e-34 137
Msa0040550 AT2G04300.1 25.905 525 299 19 2 506 7 461 1.01e-33 136
Msa0040550 AT4G29180.1 30.297 472 277 21 25 464 27 478 4.27e-33 134
Msa0040550 AT5G59660.2 25.435 460 279 14 28 478 1 405 4.41e-32 131
Msa0040550 AT2G28960.2 27.202 511 295 23 22 500 26 491 5.06e-32 131
Msa0040550 AT5G48740.1 28.676 544 314 23 4 504 1 513 6.95e-31 127
Msa0040550 AT3G46330.2 28.019 414 262 17 46 439 57 454 5.02e-30 125
Msa0040550 AT1G51870.1 26.638 458 286 21 1 426 1 440 4.94e-29 122
Msa0040550 AT1G51810.1 29.664 327 205 12 163 471 33 352 4.21e-28 119
Msa0040550 AT5G16900.4 30.619 307 185 10 206 487 16 319 4.56e-28 119
Msa0040550 AT1G51890.4 29.745 353 220 13 162 495 98 441 6.69e-28 118
Msa0040550 AT1G51830.1 28.846 312 185 8 205 503 10 297 1.50e-27 117
Msa0040550 AT1G51830.2 28.846 312 185 8 205 503 17 304 2.05e-27 117
Msa0040550 AT3G46270.2 30.294 340 206 15 24 345 36 362 1.12e-26 113
Msa0040550 AT3G46270.1 30.294 340 206 15 24 345 28 354 1.39e-26 112
Msa0040550 AT2G28970.2 27.429 350 225 11 133 464 3 341 2.81e-26 113
Msa0040550 AT2G28970.1 30.208 288 181 9 195 464 91 376 3.13e-26 113
Msa0040550 AT5G59660.3 25.547 411 227 10 98 500 91 430 5.83e-26 112
Msa0040550 AT1G51860.2 30.164 305 194 11 165 454 25 325 4.11e-25 110
Msa0040550 AT5G59660.1 25.450 389 230 11 98 478 91 427 1.26e-24 108
Msa0040550 AT3G46280.1 27.901 362 226 15 2 345 4 348 1.34e-24 107
Msa0040550 AT3G46260.1 28.920 287 180 12 24 296 27 303 5.06e-23 102
Msa0040550 AT1G24485.1 28.701 331 208 15 28 345 31 346 5.07e-23 102
Msa0040550 AT1G24485.2 28.701 331 208 15 28 345 31 346 6.02e-23 102
Msa0040550 AT1G24485.4 28.701 331 208 15 28 345 31 346 6.93e-23 101
Msa0040550 AT1G24485.3 28.701 331 208 15 28 345 31 346 1.54e-22 101
Msa0040550 AT2G28960.1 26.434 401 231 17 122 500 1 359 1.05e-21 99.4
Msa0040550 AT4G30520.1 38.857 175 92 5 342 508 23 190 6.21e-19 90.5
Msa0040550 AT3G46350.1 28.571 287 178 12 24 294 28 303 1.36e-18 88.6
Msa0040550 AT2G23950.2 38.506 174 92 5 343 508 21 187 3.09e-18 88.2
Msa0040550 AT1G51820.2 28.889 225 127 6 285 500 21 221 3.45e-18 88.2
Msa0040550 AT2G23950.1 38.506 174 92 5 343 508 21 187 3.71e-18 88.2
Msa0040550 AT5G16000.1 43.066 137 70 5 356 488 41 173 6.76e-18 87.4
Msa0040550 AT4G20140.1 40.714 140 74 4 356 488 26 163 1.06e-17 87.4
Msa0040550 AT4G22730.2 38.849 139 74 5 356 488 27 160 1.93e-17 85.5
Msa0040550 AT4G22730.1 38.849 139 74 5 356 488 27 160 2.25e-17 85.9
Msa0040550 AT5G63710.2 41.353 133 65 5 359 485 21 146 2.35e-17 85.5
Msa0040550 AT5G63710.4 41.353 133 65 5 359 485 21 146 2.35e-17 85.5
Msa0040550 AT5G63710.3 41.353 133 65 5 359 485 57 182 2.41e-17 85.5
Msa0040550 AT5G63710.1 41.353 133 65 5 359 485 56 181 2.75e-17 85.5
Msa0040550 AT3G25560.3 38.509 161 83 6 356 508 42 194 6.37e-17 84.3
Msa0040550 AT3G25560.1 38.509 161 83 6 356 508 42 194 7.53e-17 84.0
Msa0040550 AT5G63930.1 38.281 128 71 4 363 488 44 165 1.69e-16 83.6
Msa0040550 AT1G31420.1 38.060 134 75 4 377 508 60 187 2.50e-16 82.4
Msa0040550 AT1G31420.3 38.060 134 75 4 377 508 60 187 2.50e-16 82.4
Msa0040550 AT1G31420.2 38.060 134 75 4 377 508 60 187 2.56e-16 82.4
Msa0040550 AT1G60630.1 40.288 139 71 6 356 490 25 155 3.31e-16 82.0
Msa0040550 AT3G46240.1 28.824 340 194 14 25 354 5 306 4.50e-16 80.9
Msa0040550 AT5G49780.2 32.984 191 89 7 343 502 16 198 6.53e-16 81.6
Msa0040550 AT5G49780.3 33.333 171 81 5 343 486 16 180 6.87e-16 81.3
Msa0040550 AT5G37450.3 31.746 189 85 7 329 485 14 190 1.19e-15 80.5
Msa0040550 AT5G37450.2 31.746 189 85 7 329 485 14 190 1.23e-15 80.5
Msa0040550 AT3G49750.2 36.025 161 85 6 356 504 28 182 4.49e-15 73.9
Msa0040550 AT5G65830.1 32.727 165 76 5 356 488 35 196 5.37e-15 75.9
Msa0040550 AT1G63430.2 34.028 144 81 4 353 488 24 161 8.12e-15 77.8
Msa0040550 AT1G63430.3 34.028 144 81 4 353 488 24 161 8.19e-15 77.8
Msa0040550 AT1G63430.1 34.028 144 81 4 353 488 24 161 8.19e-15 77.8
Msa0040550 AT2G15320.1 36.842 152 78 7 352 488 20 168 1.09e-14 76.3
Msa0040550 AT3G02880.1 40.288 139 68 6 356 488 29 158 1.13e-14 77.4
Msa0040550 AT5G61240.1 33.533 167 82 5 351 488 23 189 1.61e-14 75.1
Msa0040550 AT2G26330.1 32.000 200 92 7 345 508 15 206 1.92e-14 77.0
Msa0040550 AT1G10850.1 38.129 139 74 6 356 490 34 164 1.95e-14 76.6
Msa0040550 AT5G45780.1 39.877 163 79 7 356 508 39 192 3.86e-14 75.5
Msa0040550 AT5G16590.1 35.294 136 77 4 356 488 28 155 3.89e-14 75.5
Msa0040550 AT5G62230.2 36.364 154 82 7 359 502 32 179 4.03e-14 75.9
Msa0040550 AT5G62230.1 37.143 140 74 5 359 490 32 165 4.31e-14 75.9
Msa0040550 AT5G06940.1 34.839 155 94 4 360 507 36 190 5.07e-14 75.5
Msa0040550 AT1G51890.5 33.146 178 99 7 285 446 14 187 5.36e-14 75.1
Msa0040550 AT3G53590.1 30.928 194 97 5 349 508 33 223 7.39e-14 75.1
Msa0040550 AT1G60800.1 38.509 161 83 6 356 508 35 187 8.79e-14 74.3
Msa0040550 AT5G37450.1 30.978 184 105 8 329 502 14 185 8.99e-14 74.7
Msa0040550 AT5G01950.7 31.746 189 93 7 333 488 9 194 9.99e-14 74.7
Msa0040550 AT5G01950.3 31.746 189 93 7 333 488 9 194 1.08e-13 74.3
Msa0040550 AT5G01950.1 31.746 189 93 7 333 488 9 194 1.08e-13 74.3
Msa0040550 AT5G01950.4 31.746 189 93 7 333 488 9 194 1.08e-13 74.3
Msa0040550 AT5G01950.8 31.746 189 93 7 333 488 9 194 1.08e-13 74.3
Msa0040550 AT5G01950.6 31.746 189 93 7 333 488 9 194 1.12e-13 74.3
Msa0040550 AT5G01950.5 31.746 189 93 7 333 488 9 194 1.17e-13 74.3
Msa0040550 AT3G25560.2 33.516 182 78 7 356 505 42 212 2.01e-13 73.2
Msa0040550 AT3G49750.1 32.121 165 77 5 356 488 28 189 2.11e-13 70.9
Msa0040550 AT5G46330.2 34.667 150 90 4 346 490 20 166 2.14e-13 73.6
Msa0040550 AT5G46330.1 34.667 150 90 4 346 490 20 166 2.14e-13 73.6
Msa0040550 AT3G12610.1 33.548 155 83 6 352 488 27 179 3.20e-13 71.6
Msa0040550 AT2G13800.3 38.636 132 73 3 378 508 58 182 3.40e-13 72.4
Msa0040550 AT2G13800.1 38.636 132 73 3 378 508 58 182 3.40e-13 72.4
Msa0040550 AT5G49760.1 34.899 149 88 5 343 488 16 158 3.75e-13 72.8
Msa0040550 AT2G13790.1 35.606 132 77 3 378 508 63 187 4.87e-13 72.0
Msa0040550 AT1G13910.2 40.909 88 51 1 398 484 126 213 5.27e-13 70.5
Msa0040550 AT1G13910.2 32.653 147 88 6 350 488 26 169 6.09e-12 67.4
Msa0040550 AT1G13910.1 40.909 88 51 1 398 484 126 213 5.35e-13 70.5
Msa0040550 AT1G13910.1 32.653 147 88 6 350 488 26 169 6.30e-12 67.4
Msa0040550 AT5G59616.1 30.519 154 95 5 260 402 1 153 5.59e-13 67.0
Msa0040550 AT5G61240.2 31.111 180 82 5 351 488 23 202 7.97e-13 70.1
Msa0040550 AT2G15300.1 36.735 147 80 5 356 491 27 171 8.67e-13 71.2
Msa0040550 AT3G50230.1 41.346 104 57 2 386 488 66 166 9.16e-13 71.2
Msa0040550 AT2G45340.1 38.739 111 63 4 376 485 51 157 9.53e-13 71.2
Msa0040550 AT3G50230.2 41.346 104 57 2 386 488 78 178 1.06e-12 71.2
Msa0040550 AT5G63930.2 40.217 92 54 1 398 488 10 101 1.14e-12 71.2
Msa0040550 AT3G49670.1 41.509 106 59 3 385 488 58 162 1.15e-12 71.2
Msa0040550 AT5G45780.2 42.754 138 66 6 375 508 21 149 1.19e-12 70.9
Msa0040550 AT1G79620.1 35.099 151 86 6 342 488 24 166 1.21e-12 71.2
Msa0040550 AT1G79620.4 35.099 151 86 6 342 488 24 166 1.30e-12 70.9
Msa0040550 AT1G73080.1 36.090 133 76 4 378 508 63 188 1.31e-12 71.2
Msa0040550 AT5G10290.1 33.083 133 84 3 357 488 34 162 1.38e-12 70.5
Msa0040550 AT5G10290.2 33.083 133 84 3 357 488 34 162 1.38e-12 70.5
Msa0040550 AT4G31250.1 32.044 181 86 8 356 502 29 206 1.47e-12 70.5
Msa0040550 AT1G79620.5 35.099 151 86 6 342 488 24 166 1.47e-12 70.9
Msa0040550 AT1G79620.3 35.099 151 86 6 342 488 24 166 1.50e-12 70.5
Msa0040550 AT1G79620.2 35.099 151 86 6 342 488 24 166 1.54e-12 70.9
Msa0040550 AT1G73066.1 30.000 140 91 3 356 490 30 167 1.79e-12 70.1
Msa0040550 AT1G73066.1 40.870 115 66 2 389 501 305 419 5.66e-11 65.5
Msa0040550 AT1G71830.1 39.416 137 77 4 375 508 49 182 1.95e-12 70.1
Msa0040550 AT1G64210.1 32.275 189 94 6 348 508 17 199 2.05e-12 70.1
Msa0040550 AT1G28440.1 31.429 140 89 4 355 490 18 154 2.47e-12 70.1
Msa0040550 AT3G12145.1 33.333 156 75 4 356 485 28 180 3.21e-12 68.2
Msa0040550 AT1G72460.1 35.714 154 86 9 359 503 27 176 3.34e-12 69.3
Msa0040550 AT5G49750.1 30.000 180 91 6 352 502 82 255 4.27e-12 68.9
Msa0040550 AT5G65700.1 37.736 106 63 3 385 488 58 162 4.32e-12 69.3
Msa0040550 AT5G65700.2 37.736 106 63 3 385 488 58 162 4.32e-12 69.3
Msa0040550 AT1G17230.1 32.704 159 72 5 377 508 54 204 5.16e-12 69.3
Msa0040550 AT1G17230.2 32.704 159 72 5 377 508 54 204 5.21e-12 69.3
Msa0040550 AT3G23750.1 29.710 138 85 4 356 489 26 155 5.35e-12 68.9
Msa0040550 AT4G03390.2 34.783 138 79 5 352 485 31 161 5.48e-12 68.9
Msa0040550 AT4G03390.1 34.783 138 79 5 352 485 31 161 5.48e-12 68.9
Msa0040550 AT1G17230.3 32.704 159 72 5 377 508 54 204 6.15e-12 68.9
Msa0040550 AT1G17750.1 36.000 125 76 3 381 502 61 184 6.67e-12 68.9
Msa0040550 AT5G51560.1 36.364 143 75 6 354 488 29 163 7.66e-12 68.2
Msa0040550 AT1G66150.1 36.937 111 68 2 398 507 210 319 8.37e-12 68.6
Msa0040550 AT3G43740.1 34.459 148 91 4 359 502 33 178 8.75e-12 65.1
Msa0040550 AT3G11080.2 29.000 200 102 6 317 488 30 217 9.54e-12 68.2
Msa0040550 AT3G11080.1 29.000 200 102 6 317 488 30 217 9.54e-12 68.2
Msa0040550 AT3G47110.1 44.944 89 47 2 402 488 357 445 1.04e-11 68.2
Msa0040550 AT1G50610.1 35.669 157 85 7 356 502 47 197 1.16e-11 67.8
Msa0040550 AT1G68400.1 40.367 109 56 3 377 485 56 155 1.27e-11 67.8
Msa0040550 AT3G14840.2 33.155 187 86 7 355 502 32 218 1.34e-11 67.8
Msa0040550 AT3G20190.1 32.051 156 93 6 356 502 52 203 1.42e-11 67.4
Msa0040550 AT2G07040.1 33.094 139 74 6 368 502 49 172 1.52e-11 67.4
Msa0040550 AT5G35390.1 28.649 185 90 7 356 508 34 208 1.53e-11 67.4
Msa0040550 AT3G05660.1 42.857 112 62 2 399 508 113 224 1.76e-11 67.4
Msa0040550 AT3G24240.1 39.316 117 69 2 394 508 487 603 2.02e-11 67.4
Msa0040550 AT1G24650.1 43.269 104 53 3 396 494 207 309 2.05e-11 67.0
Msa0040550 AT1G07650.3 28.796 191 95 5 356 505 34 224 2.19e-11 67.0
Msa0040550 AT5G07180.1 32.704 159 92 6 359 508 34 186 2.31e-11 67.0
Msa0040550 AT5G07180.1 35.714 112 70 2 399 508 290 401 4.59e-11 66.2
Msa0040550 AT1G07650.1 28.796 191 95 5 356 505 34 224 2.35e-11 67.0
Msa0040550 AT1G34210.1 35.714 154 92 5 359 508 35 185 2.36e-11 66.6
Msa0040550 AT1G34210.2 35.714 154 92 5 359 508 35 185 2.36e-11 66.6
Msa0040550 AT3G42880.1 37.692 130 72 6 377 502 51 175 2.40e-11 66.6
Msa0040550 AT5G67200.1 38.462 104 60 2 386 488 64 164 2.64e-11 66.6
Msa0040550 AT3G28040.1 32.414 145 90 4 356 496 36 176 2.68e-11 67.0
Msa0040550 AT1G69990.1 32.558 172 110 3 343 508 8 179 2.70e-11 66.6
Msa0040550 AT1G72180.1 40.909 88 51 1 402 488 415 502 2.91e-11 66.6
Msa0040550 AT1G72180.1 41.509 106 60 2 399 502 460 565 5.06e-11 65.9
Msa0040550 AT5G21090.1 33.333 153 97 4 359 508 33 183 2.98e-11 63.5
Msa0040550 AT5G07180.2 35.714 112 70 2 399 508 194 305 3.49e-11 66.2
Msa0040550 AT5G20690.1 30.370 135 63 4 377 485 56 185 4.30e-11 65.9
Msa0040550 AT5G62710.1 31.288 163 75 5 354 485 25 181 4.51e-11 65.9
Msa0040550 AT1G53440.1 30.612 147 88 1 356 488 33 179 5.53e-11 65.9
Msa0040550 AT5G62710.2 31.507 146 66 4 368 485 8 147 5.91e-11 65.5
Msa0040550 AT4G18640.1 32.000 125 79 3 386 507 62 183 6.14e-11 65.5
Msa0040550 AT2G24130.1 36.937 111 67 3 386 494 56 165 6.46e-11 65.5
Msa0040550 AT2G24130.2 36.697 109 66 3 386 492 71 178 7.02e-11 65.5
Msa0040550 AT4G03010.1 29.348 184 85 6 356 502 28 203 9.27e-11 64.3

Find 187 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGACATGGTTGGAGATTT+TGG 0.107429 1_1:+70774907 None:intergenic
GCGAACCAATGGCCTCTTTC+TGG 0.128232 1_1:-70773267 Msa0040550:CDS
TGCTTAGATTGTTCTGATTT+TGG 0.164807 1_1:-70771824 Msa0040550:three_prime_UTR
ACTGAGAAAGTTTCTGTTTC+TGG 0.167891 1_1:-70773516 Msa0040550:CDS
ATGATCAGTTTGACCGTATC+TGG 0.219580 1_1:-70773575 Msa0040550:CDS
AAGTTTCTGTTTCTGGCTTT+TGG 0.221659 1_1:-70773509 Msa0040550:CDS
GACTTCGCCGGCATTAATTA+AGG 0.222975 1_1:+70773197 None:intergenic
GGTGTTGAGGAAAGAGAGTT+TGG 0.233488 1_1:+70774980 None:intergenic
TTTCAGAAATTTGACAAGTA+TGG 0.245376 1_1:-70772811 Msa0040550:intron
TTGACAAGTATGGATCTTTC+AGG 0.246945 1_1:-70772801 Msa0040550:CDS
GCCATGTACGGTTGTTGATT+TGG 0.295163 1_1:+70774785 None:intergenic
TTGGTTACCGTTGGTTGGTT+TGG 0.312376 1_1:+70775149 None:intergenic
TTCCTTGTTGCAGCTGGCTT+GGG 0.313146 1_1:-70772663 Msa0040550:intron
ATCTTTAACATAAGTGTAAA+TGG 0.313281 1_1:-70773342 Msa0040550:CDS
AGGTGACAAGAAATTGTTTC+CGG 0.315447 1_1:+70771921 None:intergenic
GATTTGAATGCGATCGCTTC+AGG 0.316150 1_1:-70773303 Msa0040550:CDS
AAAGTATTTGAAACACATTT+AGG 0.317793 1_1:-70773471 Msa0040550:CDS
GTATAGAGCGATGTAGTATT+TGG 0.318913 1_1:+70773392 None:intergenic
TTTCCTTGTTGCAGCTGGCT+TGG 0.324854 1_1:-70772664 Msa0040550:intron
TTACAAAACAACAATTTAAC+CGG 0.326698 1_1:-70772073 Msa0040550:CDS
CCATGTACGGTTGTTGATTT+GGG 0.332412 1_1:+70774786 None:intergenic
AACTTTCTCAGTGTTTGCTT+TGG 0.333727 1_1:+70773527 None:intergenic
TATCGGGTCGAATAGTTATA+CGG 0.340421 1_1:-70774431 Msa0040550:CDS
TGGTTACCGTTGGTTGGTTT+GGG 0.343965 1_1:+70775150 None:intergenic
CAGTTGATGAGGAAGCCTTT+GGG 0.348095 1_1:+70774826 None:intergenic
GTCTTTAATGTGCTGTCTCT+TGG 0.352827 1_1:-70773177 Msa0040550:CDS
GGAGTGGGAGGGAGGGAAGA+AGG 0.356615 1_1:+70775007 None:intergenic
ATCTTTACATATCATTGTAT+AGG 0.360376 1_1:-70771623 None:intergenic
TGACCCGTTTGTTTCTGCTT+TGG 0.360641 1_1:-70774404 Msa0040550:CDS
TCCATCTGCTAGTTCATCCT+TGG 0.365261 1_1:-70773223 Msa0040550:CDS
TCCAATCAAGTGGAGGATTT+CGG 0.369878 1_1:+70773009 None:intergenic
TTCAAAGGACAGAACAGAAT+TGG 0.373839 1_1:+70775096 None:intergenic
TAACAACTTTGCTATTGGTT+TGG 0.376028 1_1:-70774338 Msa0040550:CDS
GCAGTTGATGAGGAAGCCTT+TGG 0.377306 1_1:+70774825 None:intergenic
GTGTTTGATCAGATCGTTGA+TGG 0.378868 1_1:-70774556 Msa0040550:CDS
CCTGGTTTAATGAGATTTGC+GGG 0.384360 1_1:+70772043 None:intergenic
ATATTTATCAACAGAACTTC+CGG 0.389753 1_1:-70771940 Msa0040550:intron
ACAGAACATGCCAACTTTCA+AGG 0.395340 1_1:+70771654 None:intergenic
ATCTGATCAATTAGAATCCT+TGG 0.397377 1_1:-70773448 Msa0040550:CDS
TCCGAAATCCTCCACTTGAT+TGG 0.401383 1_1:-70773010 Msa0040550:CDS
GGAACAGATTCTTTCAACTT+TGG 0.403558 1_1:-70771686 Msa0040550:three_prime_UTR
CTTGGAGTGTACTTTCATAT+TGG 0.403948 1_1:-70771710 Msa0040550:three_prime_UTR
TGTCACCTCCAGCACCTTGA+GGG 0.403980 1_1:-70771906 Msa0040550:exon
ACGCGGGAAACTGTGTTAAC+TGG 0.406704 1_1:+70775057 None:intergenic
GGAGTCAAAGTTATTGTTGT+AGG 0.413305 1_1:+70773243 None:intergenic
TGGAGAAGGAGTGGGAGGGA+GGG 0.417761 1_1:+70775000 None:intergenic
TTGGAGAAGGAGTGGGAGGG+AGG 0.418401 1_1:+70774999 None:intergenic
GACCGTATCTGGGAGCCATT+TGG 0.421040 1_1:-70773564 Msa0040550:CDS
TTAAACCAGGATTGAGCATC+AGG 0.424108 1_1:-70772030 Msa0040550:intron
CCATCTGCTAGTTCATCCTT+GGG 0.430876 1_1:-70773222 Msa0040550:CDS
TTAAGCTGCTGATGGTCCCT+AGG 0.431897 1_1:+70772284 None:intergenic
ATCGTTAGTGAACTGAGGTT+AGG 0.440726 1_1:+70772616 None:intergenic
GAGCTTACAAAGTCACTATA+CGG 0.441840 1_1:+70772919 None:intergenic
GTTAGTGAGAGCTGTCATAT+TGG 0.445640 1_1:+70772758 None:intergenic
ACTTCGCCGGCATTAATTAA+GGG 0.445998 1_1:+70773198 None:intergenic
ATACGTACTACTTATTTCTA+CGG 0.446873 1_1:-70774613 Msa0040550:CDS
GTTGGTTGGTTTGGGTTGAA+TGG 0.447581 1_1:+70775158 None:intergenic
TGGGAGGGAGGGAAGAAGGA+AGG 0.450938 1_1:+70775011 None:intergenic
ATACGGTCAAACTGATCATC+AGG 0.454600 1_1:+70773579 None:intergenic
GTTACTCCGGACCAAGCATA+AGG 0.455480 1_1:-70774297 Msa0040550:intron
GCTCTCAGTTCCTTGAAAGT+TGG 0.456459 1_1:-70771664 Msa0040550:three_prime_UTR
AAGCAAATCCCTCAAGGTGC+TGG 0.457884 1_1:+70771898 None:intergenic
GTTGATTTGGGTTGTTGTGA+GGG 0.460980 1_1:+70774798 None:intergenic
GGAAAGGGATGAAGAGGAGT+AGG 0.462164 1_1:+70774875 None:intergenic
GCGATGTAGTATTTGGAGCT+TGG 0.467113 1_1:+70773399 None:intergenic
GACAGTTATTGCTTTGCAAA+GGG 0.467127 1_1:-70773045 Msa0040550:intron
GTTGAATTACTCTGTCCAAA+TGG 0.471264 1_1:+70773549 None:intergenic
TTGGTTGCTAGAAACAGCTT+TGG 0.471469 1_1:-70774319 Msa0040550:CDS
GGAGTGTACTTTCATATTGG+TGG 0.472811 1_1:-70771707 Msa0040550:three_prime_UTR
AAGAAGAGGAGGGACATGGT+TGG 0.476428 1_1:+70774898 None:intergenic
TGAAGAGGAGTAGGAAGAAG+AGG 0.478178 1_1:+70774884 None:intergenic
TACTTTGCTGACAACACTGC+TGG 0.479658 1_1:-70773372 Msa0040550:CDS
CTTGGGAATAACAGTTTGTC+CGG 0.480070 1_1:-70772646 Msa0040550:CDS
AAGAGAGTTTGGAGAAGGAG+TGG 0.480440 1_1:+70774991 None:intergenic
GTCCAAATGGCTCCCAGATA+CGG 0.480571 1_1:+70773562 None:intergenic
CCCAAATCAACAACCGTACA+TGG 0.482133 1_1:-70774786 Msa0040550:CDS
AACTAACCTTATGCTTGGTC+CGG 0.484028 1_1:+70774291 None:intergenic
CAAAGTCACTATACGGATAC+GGG 0.484601 1_1:+70772926 None:intergenic
TCGTTAGTGAACTGAGGTTA+GGG 0.485132 1_1:+70772617 None:intergenic
AACTCCAAAGCAGAAACAAA+CGG 0.491984 1_1:+70774400 None:intergenic
TTGTCACCTCCAGCACCTTG+AGG 0.493281 1_1:-70771907 Msa0040550:exon
TCCTGGTTTAATGAGATTTG+CGG 0.493884 1_1:+70772042 None:intergenic
AGATCGTTGATGGAACGTTA+TGG 0.494471 1_1:-70774546 Msa0040550:CDS
GTGTGCCTCGGCAATACTCA+TGG 0.497560 1_1:-70772974 Msa0040550:CDS
ATTTACCTGATGCTCAATCC+TGG 0.498949 1_1:+70772025 None:intergenic
GAGATTTGCGGGAATTTGCC+CGG 0.499419 1_1:+70772054 None:intergenic
TTGTTGTCTTTGCGAACCAA+TGG 0.503375 1_1:-70773278 Msa0040550:CDS
AGAGAGTTTGGAGAAGGAGT+GGG 0.505135 1_1:+70774992 None:intergenic
CCCTTCAGAGCATGTGATAC+CGG 0.507855 1_1:+70772950 None:intergenic
GAGGAAAGAGAGTTTGGAGA+AGG 0.508389 1_1:+70774986 None:intergenic
AGAGGAGTAGGAAGAAGAGG+AGG 0.509998 1_1:+70774887 None:intergenic
GGAGAGATTCCCTCGTCCCT+AGG 0.511391 1_1:-70772301 Msa0040550:CDS
ACTCCAAAGCAGAAACAAAC+GGG 0.511790 1_1:+70774401 None:intergenic
TGACAGTTATTGCTTTGCAA+AGG 0.514133 1_1:-70773046 Msa0040550:intron
ACAAAGTCACTATACGGATA+CGG 0.514767 1_1:+70772925 None:intergenic
GGGTGTGGAAAGGGATGAAG+AGG 0.516191 1_1:+70774869 None:intergenic
GCTGTCATATTGGCAACAAA+AGG 0.517691 1_1:+70772768 None:intergenic
CCCGCAAATCTCATTAAACC+AGG 0.518461 1_1:-70772043 Msa0040550:CDS
GAGTTTGGAGAAGGAGTGGG+AGG 0.519945 1_1:+70774995 None:intergenic
TTTAATGTGCTGTCTCTTGG+AGG 0.520453 1_1:-70773174 Msa0040550:CDS
TTGTTTGATTTGGTTACCGT+TGG 0.522756 1_1:+70775140 None:intergenic
TAGGAAGAAGAGGAGGGACA+TGG 0.526075 1_1:+70774894 None:intergenic
ACCGGTATCACATGCTCTGA+AGG 0.532892 1_1:-70772951 Msa0040550:CDS
CAGAACAAAGACAGGTTCAA+AGG 0.536517 1_1:+70775081 None:intergenic
TTTGGGTTGAATGGTGATGA+AGG 0.539686 1_1:+70775167 None:intergenic
TACTACGGTGGAATATGCTA+AGG 0.540292 1_1:-70774512 Msa0040550:CDS
TTGGGCCCCTTAATTAATGC+CGG 0.541656 1_1:-70773204 Msa0040550:CDS
GGTGGTGATGAAGTTTGAAT+CGG 0.544173 1_1:+70774759 None:intergenic
CCTCAGTTCACTAACGATGT+TGG 0.544378 1_1:-70772611 Msa0040550:CDS
TGATCAAACACCGGCGGCGT+AGG 0.545134 1_1:+70774568 None:intergenic
AGCAAAGTTGTTAAAATCAG+TGG 0.545358 1_1:+70774348 None:intergenic
TGACTTGGAAAGGGAATGAA+CGG 0.547236 1_1:+70774683 None:intergenic
GTGGTGATGAAGTTTGAATC+GGG 0.547348 1_1:+70774760 None:intergenic
GCTGATGGTCCCTAGGGACG+AGG 0.547688 1_1:+70772291 None:intergenic
GTCTTTATCTCTACCATGGT+AGG 0.547807 1_1:+70771871 None:intergenic
TTGATTTGGTTACCGTTGGT+TGG 0.550703 1_1:+70775144 None:intergenic
GAGGAGTAGGAAGAAGAGGA+GGG 0.551387 1_1:+70774888 None:intergenic
AGTTTGGAGAAGGAGTGGGA+GGG 0.557583 1_1:+70774996 None:intergenic
AAGTGTTGTGTTAGGTGTTG+AGG 0.559740 1_1:+70774967 None:intergenic
GAGAGATTCCCTCGTCCCTA+GGG 0.561223 1_1:-70772300 Msa0040550:CDS
GATTCAAACTTCATCACCAC+CGG 0.561810 1_1:-70774757 Msa0040550:CDS
GAGTATTGCCGAGGCACACA+AGG 0.563611 1_1:+70772978 None:intergenic
CCTCGGCAATACTCATGGAC+CGG 0.567261 1_1:-70772969 Msa0040550:CDS
TGTTGATTTGGGTTGTTGTG+AGG 0.568649 1_1:+70774797 None:intergenic
TACAATATTCCTGTGTATCG+CGG 0.573154 1_1:-70774649 Msa0040550:CDS
TTGAATCGGGAAGCCATGTA+CGG 0.574693 1_1:+70774773 None:intergenic
TGAGGGAGCCGCAGTTGATG+AGG 0.574773 1_1:+70774815 None:intergenic
GGGAACTCGAGTTATTATGA+AGG 0.576693 1_1:-70774490 Msa0040550:CDS
TGATCAGTTTGACCGTATCT+GGG 0.577279 1_1:-70773574 Msa0040550:CDS
TAAGCTGCTGATGGTCCCTA+GGG 0.579195 1_1:+70772285 None:intergenic
AGTTGATGAGGAAGCCTTTG+GGG 0.581668 1_1:+70774827 None:intergenic
TAGAATCCTTGGAACTGAGA+TGG 0.581775 1_1:-70773437 Msa0040550:CDS
GTGGTGATCCTTGTGTGCCT+CGG 0.581945 1_1:-70772986 Msa0040550:CDS
CCCAAGGATGAACTAGCAGA+TGG 0.582356 1_1:+70773222 None:intergenic
TACAAAACAACAATTTAACC+GGG 0.583593 1_1:-70772072 Msa0040550:CDS
CTTCGCCGGCATTAATTAAG+GGG 0.584909 1_1:+70773199 None:intergenic
TCTTTATCTCTACCATGGTA+GGG 0.587070 1_1:+70771872 None:intergenic
ATTGTTGTAGGACCAGAAAG+AGG 0.587111 1_1:+70773255 None:intergenic
AGAATAATTAATGATGACGC+GGG 0.587488 1_1:+70775041 None:intergenic
TATTTCTACGGTGGAGTCAA+CGG 0.588720 1_1:-70774601 Msa0040550:CDS
CAGCACATTAAAGACTTCGC+CGG 0.589779 1_1:+70773185 None:intergenic
GGAACTCGAGTTATTATGAA+GGG 0.590882 1_1:-70774489 Msa0040550:CDS
AGAAACAGCTTTGGTTACTC+CGG 0.591518 1_1:-70774310 Msa0040550:CDS
TGTCCAACTAACCTTATGCT+TGG 0.592888 1_1:+70774286 None:intergenic
AGCCATACCGTCTCGAGTGG+AGG 0.594957 1_1:+70773146 None:intergenic
TAGGACCAGAAAGAGGCCAT+TGG 0.595896 1_1:+70773262 None:intergenic
GGCATTAATTAAGGGGCCCA+AGG 0.596903 1_1:+70773206 None:intergenic
ACTGAGGTTAGGGATCTGTC+CGG 0.598198 1_1:+70772627 None:intergenic
GTTGATGAGGAAGCCTTTGG+GGG 0.601306 1_1:+70774828 None:intergenic
ACTACGGTGGAATATGCTAA+GGG 0.603047 1_1:-70774511 Msa0040550:CDS
TTGATGAGGAAGCCTTTGGG+GGG 0.604688 1_1:+70774829 None:intergenic
TAACTGGTCAGAACAAAGAC+AGG 0.605897 1_1:+70775073 None:intergenic
AAAAGTCTTTATCTCTACCA+TGG 0.608630 1_1:+70771867 None:intergenic
AAGCGATCGCATTCAAATCA+CGG 0.611615 1_1:+70773307 None:intergenic
GGATCACCACTCCAATCAAG+TGG 0.612058 1_1:+70772999 None:intergenic
CCGGTATCACATGCTCTGAA+GGG 0.614201 1_1:-70772950 Msa0040550:CDS
ATAAGCCATACCGTCTCGAG+TGG 0.617816 1_1:+70773143 None:intergenic
TGTTGATCATCCTACGCCGC+CGG 0.619408 1_1:-70774578 Msa0040550:CDS
GGAAGAACCTCCACTCGAGA+CGG 0.621920 1_1:-70773153 Msa0040550:intron
GGGACTAAGCAAATCCCTCA+AGG 0.626657 1_1:+70771892 None:intergenic
GGTAGGCCATCTCAGTTCCA+AGG 0.630998 1_1:+70773431 None:intergenic
TTTGGAGCTTGGAAGTGAAG+CGG 0.632649 1_1:+70773410 None:intergenic
TTGGAAGAGAATCAATTCAG+TGG 0.634172 1_1:-70772322 Msa0040550:CDS
AAGAATAATTAATGATGACG+CGG 0.634920 1_1:+70775040 None:intergenic
GAGCTTGGAAGTGAAGCGGT+AGG 0.637426 1_1:+70773414 None:intergenic
ATGGAGTGAGGTGAATACTA+CGG 0.639969 1_1:-70774527 Msa0040550:CDS
GTATGCTCTACAGCAAGAGA+AGG 0.640328 1_1:+70771750 None:intergenic
CAAATCCCTCAAGGTGCTGG+AGG 0.642384 1_1:+70771901 None:intergenic
CGTACTACTTATTTCTACGG+TGG 0.644648 1_1:-70774610 Msa0040550:CDS
AATCCTCCACTTGATTGGAG+TGG 0.649294 1_1:-70773005 Msa0040550:CDS
AATCAAGTGGAGGATTTCGG+AGG 0.651188 1_1:+70773012 None:intergenic
CTGATGGTCCCTAGGGACGA+GGG 0.653745 1_1:+70772292 None:intergenic
GGTTGAATGGTGATGAAGGA+CGG 0.654459 1_1:+70775171 None:intergenic
CCGGTCCATGAGTATTGCCG+AGG 0.668683 1_1:+70772969 None:intergenic
ATTCAACCCAAACCAACCAA+CGG 0.672613 1_1:-70775156 Msa0040550:five_prime_UTR
TCACCACTCCAATCAAGTGG+AGG 0.674124 1_1:+70773002 None:intergenic
TGATGGAACGTTATGGAGTG+AGG 0.686498 1_1:-70774539 Msa0040550:CDS
CTACGGTGGAATATGCTAAG+GGG 0.687334 1_1:-70774510 Msa0040550:CDS
AGTTGGAAGAAGGACTTGCG+TGG 0.687774 1_1:+70774717 None:intergenic
GAACTCGAGTTATTATGAAG+GGG 0.689332 1_1:-70774488 Msa0040550:CDS
GATTTGCTTAGTCCCTACCA+TGG 0.690708 1_1:-70771884 Msa0040550:three_prime_UTR
TCAACGATCTGATCAAACAC+CGG 0.691190 1_1:+70774559 None:intergenic
CCAACATCGTTAGTGAACTG+AGG 0.694401 1_1:+70772611 None:intergenic
GAGTGAGGTGAATACTACGG+TGG 0.725805 1_1:-70774524 Msa0040550:CDS
ACGATCTGATCAAACACCGG+CGG 0.736258 1_1:+70774562 None:intergenic
AAAGTCACTATACGGATACG+GGG 0.739663 1_1:+70772927 None:intergenic
AAAGGCTTCCTCATCAACTG+CGG 0.747083 1_1:-70774823 Msa0040550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTGACAAATTTTAAAA+CGG + chr1_1:70772816-70772835 None:intergenic 10.0%
!!! TTTTAAAATTTGTCAATTTT+AGG - chr1_1:70772816-70772835 Msa0040550:intron 10.0%
!!! TTTAAAATTTGTCAATTTTA+GGG - chr1_1:70772817-70772836 Msa0040550:intron 10.0%
!!! AATATTGTTATTGTGTTTTA+AGG - chr1_1:70774461-70774480 Msa0040550:CDS 15.0%
!!! AAGTTTATGAGTTTTTGTAT+CGG - chr1_1:70772361-70772380 Msa0040550:intron 20.0%
!!! AAGTTTTGATGATTATCATT+TGG - chr1_1:70772567-70772586 Msa0040550:intron 20.0%
!!! TTCCTTTAAAACAATTTCAT+GGG - chr1_1:70772737-70772756 Msa0040550:intron 20.0%
!! AATGTTTATTATAGTTGTGT+TGG - chr1_1:70773106-70773125 Msa0040550:intron 20.0%
!! CTAAAAAAAATTGAACAAGA+AGG + chr1_1:70773169-70773188 None:intergenic 20.0%
!!! TTTTTAGTCATCTCTAATTT+TGG - chr1_1:70773182-70773201 Msa0040550:CDS 20.0%
!!! TTTTAGTCATCTCTAATTTT+GGG - chr1_1:70773183-70773202 Msa0040550:CDS 20.0%
!!! AAAGTATTTGAAACACATTT+AGG - chr1_1:70773338-70773357 Msa0040550:CDS 20.0%
!! ATCTTTAACATAAGTGTAAA+TGG - chr1_1:70773467-70773486 Msa0040550:CDS 20.0%
!!! TTAAATTTTTTTGATCCGTA+AGG - chr1_1:70774120-70774139 Msa0040550:intron 20.0%
!! TGAATGAAAAAATTGTAGAT+TGG + chr1_1:70774314-70774333 None:intergenic 20.0%
!! AGATAACTTCAATATATTCA+TGG - chr1_1:70774425-70774444 Msa0040550:CDS 20.0%
!! TTACCATACATGTTTAAATT+AGG - chr1_1:70774634-70774653 Msa0040550:CDS 20.0%
!! TACCATACATGTTTAAATTA+GGG - chr1_1:70774635-70774654 Msa0040550:CDS 20.0%
!! TTACAAAACAACAATTTAAC+CGG - chr1_1:70774736-70774755 Msa0040550:CDS 20.0%
!!! TGCTTTGATTTTGTTTGATT+TGG + chr1_1:70771682-70771701 None:intergenic 25.0%
!! AAGAATAATTAATGATGACG+CGG + chr1_1:70771772-70771791 None:intergenic 25.0%
!!! TTATGAAAAAGTGTTGTGTT+AGG + chr1_1:70771853-70771872 None:intergenic 25.0%
!!! ATACGTACTACTTATTTCTA+CGG - chr1_1:70772196-70772215 Msa0040550:intron 25.0%
!! AGTTTATGAGTTTTTGTATC+GGG - chr1_1:70772362-70772381 Msa0040550:intron 25.0%
!!! GATTTTAACAACTTTGCTAT+TGG - chr1_1:70772466-70772485 Msa0040550:intron 25.0%
! TGATGATTATCATTTGGTTA+TGG - chr1_1:70772573-70772592 Msa0040550:intron 25.0%
! AATTGTAGACACTAAATTAC+CGG + chr1_1:70772667-70772686 None:intergenic 25.0%
!!! GTTCCTTTAAAACAATTTCA+TGG - chr1_1:70772736-70772755 Msa0040550:intron 25.0%
!! TTTCATGGGCTAAATTATAT+TGG - chr1_1:70772751-70772770 Msa0040550:intron 25.0%
!!! TGACAAATTTTAAAACGGTT+TGG + chr1_1:70772811-70772830 None:intergenic 25.0%
! TCTCCAATTATCATTTACAT+GGG - chr1_1:70772974-70772993 Msa0040550:CDS 25.0%
! TTTCCCATGTAAATGATAAT+TGG + chr1_1:70772980-70772999 None:intergenic 25.0%
!! TGTGTTTCAAATACTTTTGA+AGG + chr1_1:70773335-70773354 None:intergenic 25.0%
! CAGCACATATAAAATTGAAA+GGG + chr1_1:70773943-70773962 None:intergenic 25.0%
! ACAGCACATATAAAATTGAA+AGG + chr1_1:70773944-70773963 None:intergenic 25.0%
! TTTCAGAAATTTGACAAGTA+TGG - chr1_1:70773998-70774017 Msa0040550:intron 25.0%
! TACAAAACAACAATTTAACC+GGG - chr1_1:70774737-70774756 Msa0040550:CDS 25.0%
! ATATTTATCAACAGAACTTC+CGG - chr1_1:70774869-70774888 Msa0040550:CDS 25.0%
! AGAATAATTAATGATGACGC+GGG + chr1_1:70771771-70771790 None:intergenic 30.0%
!!! AGTGTTTTTTGACTTGGAAA+GGG + chr1_1:70772138-70772157 None:intergenic 30.0%
!!! TTATTATGAAGGGGTGTTTT+TGG - chr1_1:70772330-70772349 Msa0040550:intron 30.0%
!!! CTTTGGAGTTTTTGATTCTT+GGG - chr1_1:70772422-70772441 Msa0040550:intron 30.0%
!! TTTGGAGTTTTTGATTCTTG+GGG - chr1_1:70772423-70772442 Msa0040550:intron 30.0%
AGCAAAGTTGTTAAAATCAG+TGG + chr1_1:70772464-70772483 None:intergenic 30.0%
!! TAACAACTTTGCTATTGGTT+TGG - chr1_1:70772471-70772490 Msa0040550:intron 30.0%
ATAGGTCAGTTCATTACTTT+AGG + chr1_1:70772623-70772642 None:intergenic 30.0%
AAGTAATGAACTGACCTATT+AGG - chr1_1:70772624-70772643 Msa0040550:CDS 30.0%
AGTAATGAACTGACCTATTA+GGG - chr1_1:70772625-70772644 Msa0040550:CDS 30.0%
!!! TTGTTTTAAAGGAACAAACG+CGG + chr1_1:70772731-70772750 None:intergenic 30.0%
!!! AGCCCATGAAATTGTTTTAA+AGG + chr1_1:70772742-70772761 None:intergenic 30.0%
AGTCTTCAAATGTGACTAAT+TGG - chr1_1:70772844-70772863 Msa0040550:intron 30.0%
CTCTCCAATTATCATTTACA+TGG - chr1_1:70772973-70772992 Msa0040550:CDS 30.0%
!! GTTTCAAATACTTTTGAAGG+TGG + chr1_1:70773332-70773351 None:intergenic 30.0%
ATCTGATCAATTAGAATCCT+TGG - chr1_1:70773361-70773380 Msa0040550:CDS 30.0%
! GTCAAATTTCTGAAAACAAC+AGG + chr1_1:70773993-70774012 None:intergenic 30.0%
GTTCTCAGGTTTAAACATAT+CGG - chr1_1:70774080-70774099 Msa0040550:intron 30.0%
GACAAAAAGAACTGTTAACT+AGG + chr1_1:70774351-70774370 None:intergenic 30.0%
TCTATAAAACACTACTGTAG+AGG + chr1_1:70774383-70774402 None:intergenic 30.0%
!!! TTATTGTGTTTTAAGGCACT+TGG - chr1_1:70774468-70774487 Msa0040550:CDS 30.0%
! AAAAGAAGTGTAAGTGATTG+TGG - chr1_1:70774546-70774565 Msa0040550:CDS 30.0%
! AAAGAAGTGTAAGTGATTGT+GGG - chr1_1:70774547-70774566 Msa0040550:CDS 30.0%
CTCCCTAATTTAAACATGTA+TGG + chr1_1:70774640-70774659 None:intergenic 30.0%
AATCTGCTTACAACAAAACA+CGG + chr1_1:70774715-70774734 None:intergenic 30.0%
AACAATTGTAGAACTCATGA+TGG + chr1_1:70774830-70774849 None:intergenic 30.0%
ATCATGAGTTCTACAATTGT+TGG - chr1_1:70774829-70774848 Msa0040550:CDS 30.0%
AAAAGTCTTTATCTCTACCA+TGG + chr1_1:70774945-70774964 None:intergenic 30.0%
! TGCTTAGATTGTTCTGATTT+TGG - chr1_1:70774985-70775004 Msa0040550:five_prime_UTR 30.0%
! TTAGATTGTTCTGATTTTGG+TGG - chr1_1:70774988-70775007 Msa0040550:five_prime_UTR 30.0%
!!! CAGCTTTATTGTTTTTGACT+TGG - chr1_1:70775081-70775100 Msa0040550:five_prime_UTR 30.0%
!! TTGTTTGATTTGGTTACCGT+TGG + chr1_1:70771672-70771691 None:intergenic 35.0%
TTCAAAGGACAGAACAGAAT+TGG + chr1_1:70771716-70771735 None:intergenic 35.0%
! ACTTGCGTGGTTATGTTTTT+GGG + chr1_1:70772082-70772101 None:intergenic 35.0%
!!! CAGTGTTTTTTGACTTGGAA+AGG + chr1_1:70772139-70772158 None:intergenic 35.0%
!!! TGTAGCAGTGTTTTTTGACT+TGG + chr1_1:70772144-70772163 None:intergenic 35.0%
TACAATATTCCTGTGTATCG+CGG - chr1_1:70772160-70772179 Msa0040550:intron 35.0%
GGAACTCGAGTTATTATGAA+GGG - chr1_1:70772320-70772339 Msa0040550:CDS 35.0%
GAACTCGAGTTATTATGAAG+GGG - chr1_1:70772321-70772340 Msa0040550:CDS 35.0%
TATCGGGTCGAATAGTTATA+CGG - chr1_1:70772378-70772397 Msa0040550:intron 35.0%
AACTCCAAAGCAGAAACAAA+CGG + chr1_1:70772412-70772431 None:intergenic 35.0%
!!! GCTTTGGAGTTTTTGATTCT+TGG - chr1_1:70772421-70772440 Msa0040550:intron 35.0%
CAGCTCAAAAATTCCCTAAT+AGG + chr1_1:70772641-70772660 None:intergenic 35.0%
CATAAGCATGTGAGATTGTT+TGG - chr1_1:70772889-70772908 Msa0040550:intron 35.0%
GTTGAATTACTCTGTCCAAA+TGG + chr1_1:70773263-70773282 None:intergenic 35.0%
AACTTTCTCAGTGTTTGCTT+TGG + chr1_1:70773285-70773304 None:intergenic 35.0%
ACTGAGAAAGTTTCTGTTTC+TGG - chr1_1:70773293-70773312 Msa0040550:CDS 35.0%
!!! AAGTTTCTGTTTCTGGCTTT+TGG - chr1_1:70773300-70773319 Msa0040550:CDS 35.0%
GTATAGAGCGATGTAGTATT+TGG + chr1_1:70773420-70773439 None:intergenic 35.0%
GGAGTCAAAGTTATTGTTGT+AGG + chr1_1:70773569-70773588 None:intergenic 35.0%
!! ATTTTAATCGTGAACATGCG+AGG - chr1_1:70773714-70773733 Msa0040550:intron 35.0%
!! AACATGCGAGGTTTTGATAT+TGG - chr1_1:70773726-70773745 Msa0040550:intron 35.0%
TGACAGTTATTGCTTTGCAA+AGG - chr1_1:70773763-70773782 Msa0040550:intron 35.0%
GACAGTTATTGCTTTGCAAA+GGG - chr1_1:70773764-70773783 Msa0040550:intron 35.0%
ACAAAGTCACTATACGGATA+CGG + chr1_1:70773887-70773906 None:intergenic 35.0%
GAGCTTACAAAGTCACTATA+CGG + chr1_1:70773893-70773912 None:intergenic 35.0%
TTGACAAGTATGGATCTTTC+AGG - chr1_1:70774008-70774027 Msa0040550:intron 35.0%
! GTGTTTCTACTCAACTATGA+TGG - chr1_1:70774246-70774265 Msa0040550:intron 35.0%
TTGGAAGAGAATCAATTCAG+TGG - chr1_1:70774487-70774506 Msa0040550:CDS 35.0%
TCCTGGTTTAATGAGATTTG+CGG + chr1_1:70774770-70774789 None:intergenic 35.0%
AGGTGACAAGAAATTGTTTC+CGG + chr1_1:70774891-70774910 None:intergenic 35.0%
TCTTTATCTCTACCATGGTA+GGG + chr1_1:70774940-70774959 None:intergenic 35.0%
CTTGGAGTGTACTTTCATAT+TGG - chr1_1:70775099-70775118 Msa0040550:five_prime_UTR 35.0%
GGAACAGATTCTTTCAACTT+TGG - chr1_1:70775123-70775142 Msa0040550:five_prime_UTR 35.0%
!! TTTGGGTTGAATGGTGATGA+AGG + chr1_1:70771645-70771664 None:intergenic 40.0%
ATTCAACCCAAACCAACCAA+CGG - chr1_1:70771653-70771672 Msa0040550:three_prime_UTR 40.0%
!! TTGATTTGGTTACCGTTGGT+TGG + chr1_1:70771668-70771687 None:intergenic 40.0%
CAGAACAAAGACAGGTTCAA+AGG + chr1_1:70771731-70771750 None:intergenic 40.0%
TAACTGGTCAGAACAAAGAC+AGG + chr1_1:70771739-70771758 None:intergenic 40.0%
! AAGTGTTGTGTTAGGTGTTG+AGG + chr1_1:70771845-70771864 None:intergenic 40.0%
!! GTTGATTTGGGTTGTTGTGA+GGG + chr1_1:70772014-70772033 None:intergenic 40.0%
!! TGTTGATTTGGGTTGTTGTG+AGG + chr1_1:70772015-70772034 None:intergenic 40.0%
!! CCATGTACGGTTGTTGATTT+GGG + chr1_1:70772026-70772045 None:intergenic 40.0%
! GTGGTGATGAAGTTTGAATC+GGG + chr1_1:70772052-70772071 None:intergenic 40.0%
! GGTGGTGATGAAGTTTGAAT+CGG + chr1_1:70772053-70772072 None:intergenic 40.0%
GATTCAAACTTCATCACCAC+CGG - chr1_1:70772052-70772071 Msa0040550:CDS 40.0%
! GACTTGCGTGGTTATGTTTT+TGG + chr1_1:70772083-70772102 None:intergenic 40.0%
!!! GAGTTTTGAGAGTTGGAAGA+AGG + chr1_1:70772105-70772124 None:intergenic 40.0%
! TGACTTGGAAAGGGAATGAA+CGG + chr1_1:70772129-70772148 None:intergenic 40.0%
!! CGTACTACTTATTTCTACGG+TGG - chr1_1:70772199-70772218 Msa0040550:intron 40.0%
! TATTTCTACGGTGGAGTCAA+CGG - chr1_1:70772208-70772227 Msa0040550:intron 40.0%
TCAACGATCTGATCAAACAC+CGG + chr1_1:70772253-70772272 None:intergenic 40.0%
GTGTTTGATCAGATCGTTGA+TGG - chr1_1:70772253-70772272 Msa0040550:intron 40.0%
! AGATCGTTGATGGAACGTTA+TGG - chr1_1:70772263-70772282 Msa0040550:intron 40.0%
ATGGAGTGAGGTGAATACTA+CGG - chr1_1:70772282-70772301 Msa0040550:CDS 40.0%
TACTACGGTGGAATATGCTA+AGG - chr1_1:70772297-70772316 Msa0040550:CDS 40.0%
ACTACGGTGGAATATGCTAA+GGG - chr1_1:70772298-70772317 Msa0040550:CDS 40.0%
GGGAACTCGAGTTATTATGA+AGG - chr1_1:70772319-70772338 Msa0040550:CDS 40.0%
ACTCCAAAGCAGAAACAAAC+GGG + chr1_1:70772411-70772430 None:intergenic 40.0%
TTGGTTGCTAGAAACAGCTT+TGG - chr1_1:70772490-70772509 Msa0040550:intron 40.0%
! AGAAACAGCTTTGGTTACTC+CGG - chr1_1:70772499-70772518 Msa0040550:intron 40.0%
AACTAACCTTATGCTTGGTC+CGG + chr1_1:70772521-70772540 None:intergenic 40.0%
TGTCCAACTAACCTTATGCT+TGG + chr1_1:70772526-70772545 None:intergenic 40.0%
!! GGGAATTTTTGAGCTGAATC+CGG - chr1_1:70772645-70772664 Msa0040550:CDS 40.0%
ACAGTGAATGAGCATGTAGT+AGG - chr1_1:70773004-70773023 Msa0040550:CDS 40.0%
ATGAGCATGTAGTAGGTTAC+AGG - chr1_1:70773011-70773030 Msa0040550:CDS 40.0%
ATACGGTCAAACTGATCATC+AGG + chr1_1:70773233-70773252 None:intergenic 40.0%
ATGATCAGTTTGACCGTATC+TGG - chr1_1:70773234-70773253 Msa0040550:CDS 40.0%
TGATCAGTTTGACCGTATCT+GGG - chr1_1:70773235-70773254 Msa0040550:CDS 40.0%
TAGAATCCTTGGAACTGAGA+TGG - chr1_1:70773372-70773391 Msa0040550:CDS 40.0%
AAGCGATCGCATTCAAATCA+CGG + chr1_1:70773505-70773524 None:intergenic 40.0%
TTGTTGTCTTTGCGAACCAA+TGG - chr1_1:70773531-70773550 Msa0040550:CDS 40.0%
ATTGTTGTAGGACCAGAAAG+AGG + chr1_1:70773557-70773576 None:intergenic 40.0%
ACTTCGCCGGCATTAATTAA+GGG + chr1_1:70773614-70773633 None:intergenic 40.0%
GTCTTTAATGTGCTGTCTCT+TGG - chr1_1:70773632-70773651 Msa0040550:intron 40.0%
TTTAATGTGCTGTCTCTTGG+AGG - chr1_1:70773635-70773654 Msa0040550:intron 40.0%
TCCAATCAAGTGGAGGATTT+CGG + chr1_1:70773803-70773822 None:intergenic 40.0%
AAAGTCACTATACGGATACG+GGG + chr1_1:70773885-70773904 None:intergenic 40.0%
CAAAGTCACTATACGGATAC+GGG + chr1_1:70773886-70773905 None:intergenic 40.0%
GCTGTCATATTGGCAACAAA+AGG + chr1_1:70774044-70774063 None:intergenic 40.0%
GTTAGTGAGAGCTGTCATAT+TGG + chr1_1:70774054-70774073 None:intergenic 40.0%
TCACTAACATGTAGGTTCTC+AGG - chr1_1:70774066-70774085 Msa0040550:intron 40.0%
TGCAACAAGGAAACACCTTA+CGG + chr1_1:70774138-70774157 None:intergenic 40.0%
CTTGGGAATAACAGTTTGTC+CGG - chr1_1:70774163-70774182 Msa0040550:intron 40.0%
TCGTTAGTGAACTGAGGTTA+GGG + chr1_1:70774195-70774214 None:intergenic 40.0%
ATCGTTAGTGAACTGAGGTT+AGG + chr1_1:70774196-70774215 None:intergenic 40.0%
! CACTTCTTTTAAGCTGCTGA+TGG + chr1_1:70774536-70774555 None:intergenic 40.0%
CCTGGTTTAATGAGATTTGC+GGG + chr1_1:70774769-70774788 None:intergenic 40.0%
TTAAACCAGGATTGAGCATC+AGG - chr1_1:70774779-70774798 Msa0040550:CDS 40.0%
ATTTACCTGATGCTCAATCC+TGG + chr1_1:70774787-70774806 None:intergenic 40.0%
TTGTAGAACTCATGATGGCA+AGG + chr1_1:70774825-70774844 None:intergenic 40.0%
GTCTTTATCTCTACCATGGT+AGG + chr1_1:70774941-70774960 None:intergenic 40.0%
GGAGTGTACTTTCATATTGG+TGG - chr1_1:70775102-70775121 Msa0040550:five_prime_UTR 40.0%
ACAGAACATGCCAACTTTCA+AGG + chr1_1:70775158-70775177 None:intergenic 40.0%
! GGTTGAATGGTGATGAAGGA+CGG + chr1_1:70771641-70771660 None:intergenic 45.0%
!! GTTGGTTGGTTTGGGTTGAA+TGG + chr1_1:70771654-70771673 None:intergenic 45.0%
!! TGGTTACCGTTGGTTGGTTT+GGG + chr1_1:70771662-70771681 None:intergenic 45.0%
! TTGGTTACCGTTGGTTGGTT+TGG + chr1_1:70771663-70771682 None:intergenic 45.0%
AGAGAGTTTGGAGAAGGAGT+GGG + chr1_1:70771820-70771839 None:intergenic 45.0%
AAGAGAGTTTGGAGAAGGAG+TGG + chr1_1:70771821-70771840 None:intergenic 45.0%
GAGGAAAGAGAGTTTGGAGA+AGG + chr1_1:70771826-70771845 None:intergenic 45.0%
! GGTGTTGAGGAAAGAGAGTT+TGG + chr1_1:70771832-70771851 None:intergenic 45.0%
! AGGGACATGGTTGGAGATTT+TGG + chr1_1:70771905-70771924 None:intergenic 45.0%
TGAAGAGGAGTAGGAAGAAG+AGG + chr1_1:70771928-70771947 None:intergenic 45.0%
! AAAAAGAGGGGGTGTGGAAA+GGG + chr1_1:70771952-70771971 None:intergenic 45.0%
TTTGAGAAAAAGAGGGGGTG+TGG + chr1_1:70771958-70771977 None:intergenic 45.0%
GGGTGTTTGAGAAAAAGAGG+GGG + chr1_1:70771963-70771982 None:intergenic 45.0%
! GGGGTGTTTGAGAAAAAGAG+GGG + chr1_1:70771964-70771983 None:intergenic 45.0%
!! GGGGGTGTTTGAGAAAAAGA+GGG + chr1_1:70771965-70771984 None:intergenic 45.0%
! TTTTCTCAAACACCCCCCAA+AGG - chr1_1:70771968-70771987 Msa0040550:intron 45.0%
!! AGTTGATGAGGAAGCCTTTG+GGG + chr1_1:70771985-70772004 None:intergenic 45.0%
!! CAGTTGATGAGGAAGCCTTT+GGG + chr1_1:70771986-70772005 None:intergenic 45.0%
AAAGGCTTCCTCATCAACTG+CGG - chr1_1:70771986-70772005 Msa0040550:intron 45.0%
CCCAAATCAACAACCGTACA+TGG - chr1_1:70772023-70772042 Msa0040550:intron 45.0%
! GCCATGTACGGTTGTTGATT+TGG + chr1_1:70772027-70772046 None:intergenic 45.0%
TTGAATCGGGAAGCCATGTA+CGG + chr1_1:70772039-70772058 None:intergenic 45.0%
!!! GGTTATGTTTTTGGGTGTGC+CGG + chr1_1:70772074-70772093 None:intergenic 45.0%
!!! GAACGGAGAGTTTTGAGAGT+TGG + chr1_1:70772112-70772131 None:intergenic 45.0%
! TATTTTGCACCGCGATACAC+AGG + chr1_1:70772172-70772191 None:intergenic 45.0%
TGATGGAACGTTATGGAGTG+AGG - chr1_1:70772270-70772289 Msa0040550:intron 45.0%
CTACGGTGGAATATGCTAAG+GGG - chr1_1:70772299-70772318 Msa0040550:CDS 45.0%
!! TGACCCGTTTGTTTCTGCTT+TGG - chr1_1:70772405-70772424 Msa0040550:intron 45.0%
GGACCAAGCATAAGGTTAGT+TGG - chr1_1:70772520-70772539 Msa0040550:intron 45.0%
! TTTGGAGCTTGGAAGTGAAG+CGG + chr1_1:70773402-70773421 None:intergenic 45.0%
! GCGATGTAGTATTTGGAGCT+TGG + chr1_1:70773413-70773432 None:intergenic 45.0%
TACTTTGCTGACAACACTGC+TGG - chr1_1:70773437-70773456 Msa0040550:CDS 45.0%
GATTTGAATGCGATCGCTTC+AGG - chr1_1:70773506-70773525 Msa0040550:CDS 45.0%
TCCATCTGCTAGTTCATCCT+TGG - chr1_1:70773586-70773605 Msa0040550:CDS 45.0%
CCATCTGCTAGTTCATCCTT+GGG - chr1_1:70773587-70773606 Msa0040550:intron 45.0%
TTGGGCCCCTTAATTAATGC+CGG - chr1_1:70773605-70773624 Msa0040550:intron 45.0%
CTTCGCCGGCATTAATTAAG+GGG + chr1_1:70773613-70773632 None:intergenic 45.0%
GACTTCGCCGGCATTAATTA+AGG + chr1_1:70773615-70773634 None:intergenic 45.0%
CAGCACATTAAAGACTTCGC+CGG + chr1_1:70773627-70773646 None:intergenic 45.0%
AATCAAGTGGAGGATTTCGG+AGG + chr1_1:70773800-70773819 None:intergenic 45.0%
TCCGAAATCCTCCACTTGAT+TGG - chr1_1:70773799-70773818 Msa0040550:intron 45.0%
AATCCTCCACTTGATTGGAG+TGG - chr1_1:70773804-70773823 Msa0040550:intron 45.0%
GACAGCTCTCACTAACATGT+AGG - chr1_1:70774058-70774077 Msa0040550:intron 45.0%
CCAACATCGTTAGTGAACTG+AGG + chr1_1:70774201-70774220 None:intergenic 45.0%
CCTCAGTTCACTAACGATGT+TGG - chr1_1:70774198-70774217 Msa0040550:intron 45.0%
GAAGTGTAAGTGATTGTGGG+CGG - chr1_1:70774550-70774569 Msa0040550:CDS 45.0%
CCCGCAAATCTCATTAAACC+AGG - chr1_1:70774766-70774785 Msa0040550:CDS 45.0%
CTCATGATGGCAAGGTGAAA+AGG + chr1_1:70774817-70774836 None:intergenic 45.0%
! GATTTGCTTAGTCCCTACCA+TGG - chr1_1:70774925-70774944 Msa0040550:five_prime_UTR 45.0%
GTATGCTCTACAGCAAGAGA+AGG + chr1_1:70775062-70775081 None:intergenic 45.0%
GCTCTCAGTTCCTTGAAAGT+TGG - chr1_1:70775145-70775164 Msa0040550:five_prime_UTR 45.0%
ACGCGGGAAACTGTGTTAAC+TGG + chr1_1:70771755-70771774 None:intergenic 50.0%
AGTTTGGAGAAGGAGTGGGA+GGG + chr1_1:70771816-70771835 None:intergenic 50.0%
AAGAAGAGGAGGGACATGGT+TGG + chr1_1:70771914-70771933 None:intergenic 50.0%
TAGGAAGAAGAGGAGGGACA+TGG + chr1_1:70771918-70771937 None:intergenic 50.0%
GAGGAGTAGGAAGAAGAGGA+GGG + chr1_1:70771924-70771943 None:intergenic 50.0%
AGAGGAGTAGGAAGAAGAGG+AGG + chr1_1:70771925-70771944 None:intergenic 50.0%
GGAAAGGGATGAAGAGGAGT+AGG + chr1_1:70771937-70771956 None:intergenic 50.0%
! GAAAAAGAGGGGGTGTGGAA+AGG + chr1_1:70771953-70771972 None:intergenic 50.0%
!! GGGGGGTGTTTGAGAAAAAG+AGG + chr1_1:70771966-70771985 None:intergenic 50.0%
TTGATGAGGAAGCCTTTGGG+GGG + chr1_1:70771983-70772002 None:intergenic 50.0%
! GTTGATGAGGAAGCCTTTGG+GGG + chr1_1:70771984-70772003 None:intergenic 50.0%
!! GCAGTTGATGAGGAAGCCTT+TGG + chr1_1:70771987-70772006 None:intergenic 50.0%
!!! TATGTTTTTGGGTGTGCCGG+TGG + chr1_1:70772071-70772090 None:intergenic 50.0%
AGTTGGAAGAAGGACTTGCG+TGG + chr1_1:70772095-70772114 None:intergenic 50.0%
ACGATCTGATCAAACACCGG+CGG + chr1_1:70772250-70772269 None:intergenic 50.0%
GAGTGAGGTGAATACTACGG+TGG - chr1_1:70772285-70772304 Msa0040550:CDS 50.0%
!!! TGAAGGGGTGTTTTTGGCTG+TGG - chr1_1:70772336-70772355 Msa0040550:intron 50.0%
!!! GAAGGGGTGTTTTTGGCTGT+GGG - chr1_1:70772337-70772356 Msa0040550:intron 50.0%
!!! AAGGGGTGTTTTTGGCTGTG+GGG - chr1_1:70772338-70772357 Msa0040550:intron 50.0%
GTTACTCCGGACCAAGCATA+AGG - chr1_1:70772512-70772531 Msa0040550:intron 50.0%
GTCCAAATGGCTCCCAGATA+CGG + chr1_1:70773250-70773269 None:intergenic 50.0%
TAGGACCAGAAAGAGGCCAT+TGG + chr1_1:70773550-70773569 None:intergenic 50.0%
CCCAAGGATGAACTAGCAGA+TGG + chr1_1:70773590-70773609 None:intergenic 50.0%
GGCATTAATTAAGGGGCCCA+AGG + chr1_1:70773606-70773625 None:intergenic 50.0%
ATAAGCCATACCGTCTCGAG+TGG + chr1_1:70773669-70773688 None:intergenic 50.0%
TCACCACTCCAATCAAGTGG+AGG + chr1_1:70773810-70773829 None:intergenic 50.0%
GGATCACCACTCCAATCAAG+TGG + chr1_1:70773813-70773832 None:intergenic 50.0%
ACCGGTATCACATGCTCTGA+AGG - chr1_1:70773858-70773877 Msa0040550:intron 50.0%
CCCTTCAGAGCATGTGATAC+CGG + chr1_1:70773862-70773881 None:intergenic 50.0%
! CCGGTATCACATGCTCTGAA+GGG - chr1_1:70773859-70773878 Msa0040550:intron 50.0%
AGGTGTTTCCTTGTTGCAGC+TGG - chr1_1:70774140-70774159 Msa0040550:intron 50.0%
TTTCCTTGTTGCAGCTGGCT+TGG - chr1_1:70774145-70774164 Msa0040550:intron 50.0%
! TTCCTTGTTGCAGCTGGCTT+GGG - chr1_1:70774146-70774165 Msa0040550:intron 50.0%
ACTGAGGTTAGGGATCTGTC+CGG + chr1_1:70774185-70774204 None:intergenic 50.0%
TAAGCTGCTGATGGTCCCTA+GGG + chr1_1:70774527-70774546 None:intergenic 50.0%
TTAAGCTGCTGATGGTCCCT+AGG + chr1_1:70774528-70774547 None:intergenic 50.0%
GAGATTTGCGGGAATTTGCC+CGG + chr1_1:70774758-70774777 None:intergenic 50.0%
AAGCAAATCCCTCAAGGTGC+TGG + chr1_1:70774914-70774933 None:intergenic 50.0%
GGGACTAAGCAAATCCCTCA+AGG + chr1_1:70774920-70774939 None:intergenic 50.0%
GAGTTTGGAGAAGGAGTGGG+AGG + chr1_1:70771817-70771836 None:intergenic 55.0%
GGGTGTGGAAAGGGATGAAG+AGG + chr1_1:70771943-70771962 None:intergenic 55.0%
TGTTGATCATCCTACGCCGC+CGG - chr1_1:70772231-70772250 Msa0040550:intron 55.0%
GACCGTATCTGGGAGCCATT+TGG - chr1_1:70773245-70773264 Msa0040550:CDS 55.0%
GGTAGGCCATCTCAGTTCCA+AGG + chr1_1:70773381-70773400 None:intergenic 55.0%
GAGCTTGGAAGTGAAGCGGT+AGG + chr1_1:70773398-70773417 None:intergenic 55.0%
GCGAACCAATGGCCTCTTTC+TGG - chr1_1:70773542-70773561 Msa0040550:CDS 55.0%
GGAAGAACCTCCACTCGAGA+CGG - chr1_1:70773656-70773675 Msa0040550:intron 55.0%
AACCTCCACTCGAGACGGTA+TGG - chr1_1:70773661-70773680 Msa0040550:intron 55.0%
GTGGTGATCCTTGTGTGCCT+CGG - chr1_1:70773823-70773842 Msa0040550:intron 55.0%
! GAGTATTGCCGAGGCACACA+AGG + chr1_1:70773834-70773853 None:intergenic 55.0%
GTGTGCCTCGGCAATACTCA+TGG - chr1_1:70773835-70773854 Msa0040550:intron 55.0%
CCTCGGCAATACTCATGGAC+CGG - chr1_1:70773840-70773859 Msa0040550:intron 55.0%
TTCCCAAGCCAGCTGCAACA+AGG + chr1_1:70774151-70774170 None:intergenic 55.0%
GAGAGATTCCCTCGTCCCTA+GGG - chr1_1:70774509-70774528 Msa0040550:CDS 55.0%
TTGTCACCTCCAGCACCTTG+AGG - chr1_1:70774902-70774921 Msa0040550:exon 55.0%
TGTCACCTCCAGCACCTTGA+GGG - chr1_1:70774903-70774922 Msa0040550:exon 55.0%
!! CAAATCCCTCAAGGTGCTGG+AGG + chr1_1:70774911-70774930 None:intergenic 55.0%
TGGGAGGGAGGGAAGAAGGA+AGG + chr1_1:70771801-70771820 None:intergenic 60.0%
TGGAGAAGGAGTGGGAGGGA+GGG + chr1_1:70771812-70771831 None:intergenic 60.0%
TTGGAGAAGGAGTGGGAGGG+AGG + chr1_1:70771813-70771832 None:intergenic 60.0%
! TGAGGGAGCCGCAGTTGATG+AGG + chr1_1:70771997-70772016 None:intergenic 60.0%
TGATCAAACACCGGCGGCGT+AGG + chr1_1:70772244-70772263 None:intergenic 60.0%
AGCCATACCGTCTCGAGTGG+AGG + chr1_1:70773666-70773685 None:intergenic 60.0%
! CCGGTCCATGAGTATTGCCG+AGG + chr1_1:70773843-70773862 None:intergenic 60.0%
GGAGAGATTCCCTCGTCCCT+AGG - chr1_1:70774508-70774527 Msa0040550:CDS 60.0%
CTGATGGTCCCTAGGGACGA+GGG + chr1_1:70774520-70774539 None:intergenic 60.0%
GGAGTGGGAGGGAGGGAAGA+AGG + chr1_1:70771805-70771824 None:intergenic 65.0%
GCTGATGGTCCCTAGGGACG+AGG + chr1_1:70774521-70774540 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 70771625 70775206 70771625 ID=Msa0040550;Name=Msa0040550
chr1_1 mRNA 70771625 70775206 70771625 ID=Msa0040550-mRNA-1;Parent=Msa0040550;Name=Msa0040550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=292|1|1|1|1|1|8|284|508
chr1_1 exon 70771625 70771948 70771625 ID=Msa0040550-mRNA-1:exon:23325;Parent=Msa0040550-mRNA-1
chr1_1 exon 70772031 70772099 70772031 ID=Msa0040550-mRNA-1:exon:23324;Parent=Msa0040550-mRNA-1
chr1_1 exon 70772277 70772348 70772277 ID=Msa0040550-mRNA-1:exon:23323;Parent=Msa0040550-mRNA-1
chr1_1 exon 70772604 70772672 70772604 ID=Msa0040550-mRNA-1:exon:23322;Parent=Msa0040550-mRNA-1
chr1_1 exon 70772756 70772827 70772756 ID=Msa0040550-mRNA-1:exon:23321;Parent=Msa0040550-mRNA-1
chr1_1 exon 70772927 70773062 70772927 ID=Msa0040550-mRNA-1:exon:23320;Parent=Msa0040550-mRNA-1
chr1_1 exon 70773154 70773605 70773154 ID=Msa0040550-mRNA-1:exon:23319;Parent=Msa0040550-mRNA-1
chr1_1 exon 70774298 70775206 70774298 ID=Msa0040550-mRNA-1:exon:23318;Parent=Msa0040550-mRNA-1
chr1_1 five_prime_UTR 70774915 70775206 70774915 ID=Msa0040550-mRNA-1:five_prime_utr;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70774298 70774914 70774298 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70773154 70773605 70773154 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70772927 70773062 70772927 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70772756 70772827 70772756 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70772604 70772672 70772604 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70772277 70772348 70772277 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70772031 70772099 70772031 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 CDS 70771909 70771948 70771909 ID=Msa0040550-mRNA-1:cds;Parent=Msa0040550-mRNA-1
chr1_1 three_prime_UTR 70771625 70771908 70771625 ID=Msa0040550-mRNA-1:three_prime_utr;Parent=Msa0040550-mRNA-1
Gene Sequence

>Msa0040550

ATGTCCCTCCTCTTCTTCCTACTCCTCTTCATCCCTTTCCACACCCCCTCTTTTTCTCAAACACCCCCCAAAGGCTTCCTCATCAACTGCGGCTCCCTCACAACAACCCAAATCAACAACCGTACATGGCTTCCCGATTCAAACTTCATCACCACCGGCACACCCAAAAACATAACCACGCAAGTCCTTCTTCCAACTCTCAAAACTCTCCGTTCATTCCCTTTCCAAGTCAAAAAACACTGCTACAATATTCCTGTGTATCGCGGTGCAAAATATATGATACGTACTACTTATTTCTACGGTGGAGTCAACGGTGTTGATCATCCTACGCCGCCGGTGTTTGATCAGATCGTTGATGGAACGTTATGGAGTGAGGTGAATACTACGGTGGAATATGCTAAGGGGAACTCGAGTTATTATGAAGGGGTGTTTTTGGCTGTGGGGAAGTTTATGAGTTTTTGTATCGGGTCGAATAGTTATACGGATTCTGACCCGTTTGTTTCTGCTTTGGAGTTTTTGATTCTTGGGGATTCGTTGTATAATACCACTGATTTTAACAACTTTGCTATTGGTTTGGTTGCTAGAAACAGCTTTGGTTACTCCGGACCAAGCATAAGATATCCTGATGATCAGTTTGACCGTATCTGGGAGCCATTTGGACAGAGTAATTCAACCAAAGCAAACACTGAGAAAGTTTCTGTTTCTGGCTTTTGGAATCTTCCACCTTCAAAAGTATTTGAAACACATTTAGGATCTGATCAATTAGAATCCTTGGAACTGAGATGGCCTACCGCTTCACTTCCAAGCTCCAAATACTACATCGCTCTATACTTTGCTGACAACACTGCTGGATCAAGAATCTTTAACATAAGTGTAAATGGCGTGCATTATTACCGTGATTTGAATGCGATCGCTTCAGGCGTTGTTGTCTTTGCGAACCAATGGCCTCTTTCTGGTCCTACAACAATAACTTTGACTCCATCTGCTAGTTCATCCTTGGGCCCCTTAATTAATGCCGGCGAAGTCTTTAATGTGCTGTCTCTTGGAGGAAGAACCTCCACTCGAGACGTTATTGCTTTGCAAAGGGTAAAAGAGAGCCTCCGAAATCCTCCACTTGATTGGAGTGGTGATCCTTGTGTGCCTCGGCAATACTCATGGACCGGTATCACATGCTCTGAAGGGCCCCGTATCCGTATAGTGACTTTAAATTTGACAAGTATGGATCTTTCAGGATCTTTATCGCCTTTTGTTGCCAATATGACAGCTCTCACTAACATCTGGCTTGGGAATAACAGTTTGTCCGGACAGATCCCTAACCTCAGTTCACTAACGATGTTGGAGACACTGCACTTGGAAGAGAATCAATTCAGTGGAGAGATTCCCTCGTCCCTAGGGACCATCAGCAGCTTAAAAGAAGTATTTTTACAAAACAACAATTTAACCGGGCAAATTCCCGCAAATCTCATTAAACCAGGATTGAGCATCAGAACTTCCGGAAACAATTTCTTGTCACCTCCAGCACCTTGA
Protein sequence

>Msa0040550

MSLLFFLLLFIPFHTPSFSQTPPKGFLINCGSLTTTQINNRTWLPDSNFITTGTPKNITTQVLLPTLKTLRSFPFQVKKHCYNIPVYRGAKYMIRTTYFYGGVNGVDHPTPPVFDQIVDGTLWSEVNTTVEYAKGNSSYYEGVFLAVGKFMSFCIGSNSYTDSDPFVSALEFLILGDSLYNTTDFNNFAIGLVARNSFGYSGPSIRYPDDQFDRIWEPFGQSNSTKANTEKVSVSGFWNLPPSKVFETHLGSDQLESLELRWPTASLPSSKYYIALYFADNTAGSRIFNISVNGVHYYRDLNAIASGVVVFANQWPLSGPTTITLTPSASSSLGPLINAGEVFNVLSLGGRTSTRDVIALQRVKESLRNPPLDWSGDPCVPRQYSWTGITCSEGPRIRIVTLNLTSMDLSGSLSPFVANMTALTNIWLGNNSLSGQIPNLSSLTMLETLHLEENQFSGEIPSSLGTISSLKEVFLQNNNLTGQIPANLIKPGLSIRTSGNNFLSPPAP*