Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216980 | sp|Q8RY23|NSH3_ARATH | 66.055 | 872 | 288 | 5 | 14 | 877 | 17 | 888 | 0.0 | 1188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216980 | A0A396IF37 | 97.085 | 892 | 22 | 2 | 1 | 892 | 44 | 931 | 0.0 | 1795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035690 | Msa1216980 | 0.833207 | 6.088766e-56 | -8.615850e-47 |
| Msa0035710 | Msa1216980 | 0.811534 | 6.672023e-51 | -8.615850e-47 |
| Msa0118270 | Msa1216980 | 0.812531 | 4.044866e-51 | -8.615850e-47 |
| Msa0754430 | Msa1216980 | 0.809688 | 1.672331e-50 | -8.615850e-47 |
| Msa0754450 | Msa1216980 | 0.812252 | 4.654751e-51 | -8.615850e-47 |
| Msa0813160 | Msa1216980 | 0.828490 | 8.732430e-55 | -8.615850e-47 |
| Msa0124910 | Msa1216980 | 0.804616 | 1.982793e-49 | -8.615850e-47 |
| Msa0161400 | Msa1216980 | 0.816421 | 5.579158e-52 | -8.615850e-47 |
| Msa0218040 | Msa1216980 | 0.822425 | 2.384770e-53 | -8.615850e-47 |
| Msa0389690 | Msa1216980 | 0.817787 | 2.751592e-52 | -8.615850e-47 |
| Msa0416020 | Msa1216980 | 0.820135 | 8.046884e-53 | -8.615850e-47 |
| Msa0440350 | Msa1216980 | 0.812343 | 4.446629e-51 | -8.615850e-47 |
| Msa1074900 | Msa1216980 | 0.802123 | 6.512995e-49 | -8.615850e-47 |
| Msa1078830 | Msa1216980 | 0.819237 | 1.290751e-52 | -8.615850e-47 |
| Msa1078890 | Msa1216980 | 0.801843 | 7.436399e-49 | -8.615850e-47 |
| Msa0269210 | Msa1216980 | 0.812027 | 5.212660e-51 | -8.615850e-47 |
| Msa0288620 | Msa1216980 | 0.811058 | 8.463043e-51 | -8.615850e-47 |
| Msa0326710 | Msa1216980 | 0.815110 | 1.093526e-51 | -8.615850e-47 |
| Msa1132990 | Msa1216980 | 0.829096 | 6.231657e-55 | -8.615850e-47 |
| Msa1165090 | Msa1216980 | 0.800775 | 1.230392e-48 | -8.615850e-47 |
| Msa1169660 | Msa1216980 | 0.811182 | 7.954985e-51 | -8.615850e-47 |
| Msa1207330 | Msa1216980 | 0.817626 | 2.991130e-52 | -8.615850e-47 |
| Msa1216960 | Msa1216980 | 0.815464 | 9.123810e-52 | -8.615850e-47 |
| Msa1216980 | Msa1217080 | 0.813927 | 1.997523e-51 | -8.615850e-47 |
| Msa1216980 | Msa1217120 | 0.885915 | 5.386875e-72 | -8.615850e-47 |
| Msa1216980 | Msa1257570 | 0.803909 | 2.782946e-49 | -8.615850e-47 |
| Msa1216980 | Msa1262670 | 0.951345 | 2.482306e-109 | -8.615850e-47 |
| Msa1216980 | Msa1331300 | 0.812753 | 3.618083e-51 | -8.615850e-47 |
| Msa1216980 | Msa1366150 | 0.803629 | 3.182624e-49 | -8.615850e-47 |
| Msa1216980 | Msa1387440 | 0.814732 | 1.326036e-51 | -8.615850e-47 |
| Msa1216980 | Msa1429070 | 0.803330 | 3.670442e-49 | -8.615850e-47 |
| Msa0502510 | Msa1216980 | 0.818841 | 1.588317e-52 | -8.615850e-47 |
| Msa0508180 | Msa1216980 | 0.836685 | 8.094345e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216980 | MtrunA17_Chr4g0066571 | 97.085 | 892 | 22 | 2 | 1 | 892 | 44 | 931 | 0.0 | 1795 |
| Msa1216980 | MtrunA17_Chr4g0066541 | 86.277 | 889 | 118 | 2 | 7 | 892 | 5 | 892 | 0.0 | 1586 |
| Msa1216980 | MtrunA17_Chr2g0286751 | 76.871 | 882 | 196 | 4 | 1 | 879 | 1 | 877 | 0.0 | 1365 |
| Msa1216980 | MtrunA17_Chr2g0286771 | 72.556 | 266 | 72 | 1 | 615 | 879 | 33 | 298 | 7.84e-131 | 394 |
| Msa1216980 | MtrunA17_Chr2g0286761 | 85.000 | 80 | 12 | 0 | 101 | 180 | 22 | 101 | 7.96e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216980 | AT5G18860.1 | 66.055 | 872 | 288 | 5 | 14 | 877 | 17 | 888 | 0.0 | 1188 |
| Msa1216980 | AT5G18860.2 | 66.055 | 872 | 288 | 5 | 14 | 877 | 17 | 888 | 0.0 | 1188 |
| Msa1216980 | AT5G18890.1 | 61.338 | 538 | 203 | 4 | 352 | 887 | 14 | 548 | 0.0 | 692 |
| Msa1216980 | AT5G18890.1 | 30.625 | 320 | 161 | 11 | 15 | 313 | 149 | 428 | 8.09e-31 | 129 |
| Msa1216980 | AT5G18870.1 | 63.670 | 267 | 76 | 4 | 4 | 269 | 5 | 251 | 9.42e-107 | 330 |
| Msa1216980 | AT5G18870.1 | 35.470 | 234 | 109 | 10 | 512 | 725 | 42 | 253 | 9.97e-25 | 105 |
Find 214 sgRNAs with CRISPR-Local
Find 595 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTATTGTTTCTTTCTTTC+TGG | 0.058520 | 8_1:-79175754 | Msa1216980:five_prime_UTR |
| ATCGATTCCGACACTCTTTA+TGG | 0.143772 | 8_1:-79168088 | Msa1216980:CDS |
| ATTATCTCCTTTGTGATTAT+TGG | 0.164889 | 8_1:+79169576 | None:intergenic |
| ATTAGTACCTGTTCTATTAT+TGG | 0.193899 | 8_1:+79173825 | None:intergenic |
| CCCAAGTTCAATCTTGAAAA+AGG | 0.217809 | 8_1:-79169451 | Msa1216980:CDS |
| TTATCTCCTTTGTGATTATT+GGG | 0.230423 | 8_1:+79169577 | None:intergenic |
| TATGCAGAATTCAATATCTT+TGG | 0.234222 | 8_1:-79170360 | Msa1216980:CDS |
| GGCTCCAATCCATTATTTAA+TGG | 0.244145 | 8_1:-79169484 | Msa1216980:CDS |
| ATGTTTGCAGGACACTTTCC+TGG | 0.248012 | 8_1:-79166505 | Msa1216980:intron |
| TGTGGTACATATTTATATAA+TGG | 0.249380 | 8_1:-79170502 | Msa1216980:CDS |
| TTTATATAGGTGATTCATTC+TGG | 0.249600 | 8_1:-79169965 | Msa1216980:intron |
| TTAGATATTGATGCAAATTA+TGG | 0.259558 | 8_1:-79171766 | Msa1216980:CDS |
| AGTTCATTTGCAACTATTAT+AGG | 0.268320 | 8_1:-79166748 | Msa1216980:CDS |
| CATATGGTAATATCTGTTAT+TGG | 0.273254 | 8_1:+79166645 | None:intergenic |
| CGTATTGTTTCTTTCTTTCT+GGG | 0.275193 | 8_1:-79175753 | Msa1216980:five_prime_UTR |
| GATCATGATATCAGGGAAAA+AGG | 0.275264 | 8_1:-79170665 | Msa1216980:intron |
| ACTTTCCTGGGTGAAATTCT+AGG | 0.275745 | 8_1:-79166492 | Msa1216980:CDS |
| TGTAAAGTAAGTCATAAATT+TGG | 0.284749 | 8_1:+79173940 | None:intergenic |
| ACATGTTGAATTCTGCATAT+TGG | 0.301217 | 8_1:+79166854 | None:intergenic |
| ACGGGCTTCACCTCAAATTT+CGG | 0.313540 | 8_1:+79166432 | None:intergenic |
| AACCACTAGCTATGGAAGTT+TGG | 0.317235 | 8_1:-79167614 | Msa1216980:CDS |
| CCTCCAACAGCTCCGAATAT+TGG | 0.317457 | 8_1:+79168154 | None:intergenic |
| TTCTGATTCCAACACTGTTT+TGG | 0.318854 | 8_1:+79166813 | None:intergenic |
| TGAGGTGTGGATTATTCATT+AGG | 0.319796 | 8_1:+79170532 | None:intergenic |
| CAACACTTCACAATTTCAAT+TGG | 0.328503 | 8_1:-79175571 | Msa1216980:CDS |
| TTGAAGAACAGACGAGGAAT+TGG | 0.336099 | 8_1:-79166245 | Msa1216980:CDS |
| TTGATGCAAATTATGGTATC+AGG | 0.339395 | 8_1:-79171759 | Msa1216980:CDS |
| GGTAGATATCCACCAACATT+TGG | 0.339504 | 8_1:+79173846 | None:intergenic |
| GTAAGTTACTTCTTTGTAGT+AGG | 0.342360 | 8_1:+79168859 | None:intergenic |
| AAATATAAGCTCTAGAATTC+AGG | 0.359345 | 8_1:-79167499 | Msa1216980:intron |
| ACTATTATAGGTAGATTAGA+AGG | 0.359872 | 8_1:-79166736 | Msa1216980:CDS |
| AGATAATGAATTTGCTGAAA+TGG | 0.360031 | 8_1:-79169560 | Msa1216980:CDS |
| GTTGGTTAGTACAGTAATAT+TGG | 0.363878 | 8_1:+79167560 | None:intergenic |
| GATGATATTGCTGTTGGAAT+TGG | 0.375044 | 8_1:-79173906 | Msa1216980:CDS |
| CCACTAGCTAAGACTTTAAC+GGG | 0.381874 | 8_1:+79166414 | None:intergenic |
| GTGGTACATATTTATATAAT+GGG | 0.382106 | 8_1:-79170501 | Msa1216980:CDS |
| GGAGAAAACTCTGTGAAGTT+TGG | 0.384074 | 8_1:-79167672 | Msa1216980:CDS |
| AATTCTGCATATTGGTTTGA+AGG | 0.384962 | 8_1:+79166862 | None:intergenic |
| TTCTTCAAAGCTTCCTACCT+TGG | 0.386548 | 8_1:+79166260 | None:intergenic |
| TCCCACAACTTTGTTTATGA+TGG | 0.392327 | 8_1:-79170580 | Msa1216980:CDS |
| ACCACTAGCTATGGAAGTTT+GGG | 0.398336 | 8_1:-79167613 | Msa1216980:CDS |
| GCAATCATTGTGAGTCCTAC+TGG | 0.403689 | 8_1:-79168286 | Msa1216980:CDS |
| CAGAGATCCTCTTTGCTTCG+TGG | 0.405820 | 8_1:-79169395 | Msa1216980:CDS |
| GCTAGTGGTTGTCTAAGTTC+AGG | 0.406726 | 8_1:+79167627 | None:intergenic |
| GTTCGACAACGAATTCTATT+CGG | 0.406887 | 8_1:-79169801 | Msa1216980:intron |
| AATCAGGGAATGACAACAAT+AGG | 0.410795 | 8_1:-79171835 | Msa1216980:intron |
| ACAAGTACCCTTACTGAGTC+TGG | 0.412101 | 8_1:+79169107 | None:intergenic |
| AGAGCAACCAACTGCTCAAC+AGG | 0.415239 | 8_1:-79170628 | Msa1216980:CDS |
| TGAAAATATCTCGTGATACT+TGG | 0.415655 | 8_1:-79169823 | Msa1216980:CDS |
| AAGATATTGAATTCTGCATA+AGG | 0.415808 | 8_1:+79170363 | None:intergenic |
| AAGTCTGAATCCGAAATTTG+AGG | 0.417828 | 8_1:-79166442 | Msa1216980:CDS |
| CCTCTTTGCTTCGTGGAGAA+TGG | 0.419513 | 8_1:-79169388 | Msa1216980:CDS |
| CAGGCCATTCCCGTAGGACT+TGG | 0.424788 | 8_1:-79171796 | Msa1216980:CDS |
| TGGTTTGCTTCAAACGGTTT+AGG | 0.425581 | 8_1:+79166665 | None:intergenic |
| GTAGATATCCACCAACATTT+GGG | 0.428530 | 8_1:+79173847 | None:intergenic |
| GCAAATAGCTGGACTAGTGC+TGG | 0.429924 | 8_1:-79173975 | Msa1216980:CDS |
| AATCAGAGAGATCCAATATT+CGG | 0.430677 | 8_1:-79168166 | Msa1216980:CDS |
| TGTTCAAGTAATCGACCTTA+AGG | 0.431076 | 8_1:-79168735 | Msa1216980:intron |
| TTAAGGTCGATTACTTGAAC+AGG | 0.436542 | 8_1:+79168737 | None:intergenic |
| CAACGGACCCTTGACTAACT+TGG | 0.436573 | 8_1:-79167541 | Msa1216980:CDS |
| GAGCCATCAGATATTCCATA+TGG | 0.441356 | 8_1:+79169502 | None:intergenic |
| ATTAAGCAATGTGGAGGAAA+AGG | 0.442657 | 8_1:-79166331 | Msa1216980:CDS |
| GTGCAGTAGTCTTGGCTGAT+AGG | 0.443525 | 8_1:-79166470 | Msa1216980:CDS |
| GCCACTAGCTAAGACTTTAA+CGG | 0.443932 | 8_1:+79166413 | None:intergenic |
| TCCACCAACATTTGGGAGAA+TGG | 0.444455 | 8_1:+79173854 | None:intergenic |
| CAATAGGAGGCTGCAGATAC+AGG | 0.445673 | 8_1:-79171819 | Msa1216980:CDS |
| TGTTATTGGTTTGCTTCAAA+CGG | 0.450871 | 8_1:+79166659 | None:intergenic |
| GCAACAACCACCACATGGCT+TGG | 0.452339 | 8_1:-79166157 | Msa1216980:three_prime_UTR |
| ATTACTTCAAATAAACCATA+TGG | 0.452481 | 8_1:-79169517 | Msa1216980:CDS |
| CACTTCACAATTTCAATTGG+AGG | 0.455153 | 8_1:-79175568 | Msa1216980:intron |
| TAAGTTACTTCTTTGTAGTA+GGG | 0.456135 | 8_1:+79168860 | None:intergenic |
| TAGGCCATTAAATAATGGAT+TGG | 0.462074 | 8_1:+79169480 | None:intergenic |
| ATCAGCACCTGTTGAGCAGT+TGG | 0.464414 | 8_1:+79170621 | None:intergenic |
| AAGCACCTTCTTGGGCTTCG+TGG | 0.471386 | 8_1:+79168049 | None:intergenic |
| TAGGCTTGACAATAGACTCT+TGG | 0.471773 | 8_1:+79166684 | None:intergenic |
| ATGTTGGGAGTTCACTTGAC+AGG | 0.473138 | 8_1:-79169058 | Msa1216980:CDS |
| TGTTTGCAGGACACTTTCCT+GGG | 0.476236 | 8_1:-79166504 | Msa1216980:intron |
| TTTCTTTCTTTCTGGGTCTG+AGG | 0.477353 | 8_1:-79175746 | Msa1216980:five_prime_UTR |
| AGATATTGAATTCTGCATAA+GGG | 0.477716 | 8_1:+79170364 | None:intergenic |
| TATGACTTACTTTACATGAT+GGG | 0.479443 | 8_1:-79173933 | Msa1216980:CDS |
| CTTGAACAGGCACTTTAAGA+AGG | 0.479468 | 8_1:+79168750 | None:intergenic |
| GCAAAGCCTAACCGAGATGT+TGG | 0.482388 | 8_1:-79169074 | Msa1216980:CDS |
| TTATGACTTACTTTACATGA+TGG | 0.484601 | 8_1:-79173934 | Msa1216980:CDS |
| TGACCATCAGTGCAAATAGC+TGG | 0.486563 | 8_1:-79173986 | Msa1216980:CDS |
| ATATAATGGGTGGAGGTGTA+AGG | 0.487070 | 8_1:-79170488 | Msa1216980:CDS |
| AAAACGTCTCCTAGACCAAC+TGG | 0.490973 | 8_1:+79168196 | None:intergenic |
| CCCACAACTTTGTTTATGAT+GGG | 0.491827 | 8_1:-79170579 | Msa1216980:CDS |
| TCCTCCAAGTCCTACGGGAA+TGG | 0.492034 | 8_1:+79171792 | None:intergenic |
| CCAATATTCGGAGCTGTTGG+AGG | 0.494618 | 8_1:-79168154 | Msa1216980:CDS |
| CTAGTGGTTGTCTAAGTTCA+GGG | 0.496809 | 8_1:+79167628 | None:intergenic |
| CTCTTGGTAAACACAACCTC+TGG | 0.497883 | 8_1:+79166700 | None:intergenic |
| GATGATATACCAGTTGGTCT+AGG | 0.500674 | 8_1:-79168205 | Msa1216980:CDS |
| GCCATTCCCGTAGGACTTGG+AGG | 0.501855 | 8_1:-79171793 | Msa1216980:CDS |
| TAGGTGGTCCAGACTCAGTA+AGG | 0.505627 | 8_1:-79169115 | Msa1216980:CDS |
| GTTGCGGCCACTCTTAACCT+TGG | 0.505742 | 8_1:+79166175 | None:intergenic |
| CAAAGCCTAACCGAGATGTT+GGG | 0.507521 | 8_1:-79169073 | Msa1216980:CDS |
| ATCAAAGAATTGTTCAGTGA+TGG | 0.507773 | 8_1:+79169898 | None:intergenic |
| CTTGTTGAATATGACCACTA+TGG | 0.508643 | 8_1:+79169422 | None:intergenic |
| GTTTGGAGCCCCACGGGATA+CGG | 0.508801 | 8_1:-79167655 | Msa1216980:CDS |
| GGGAGAGATGATATTGCTGT+TGG | 0.509268 | 8_1:-79173912 | Msa1216980:CDS |
| AATTCTAGGTGCAGTAGTCT+TGG | 0.512169 | 8_1:-79166478 | Msa1216980:CDS |
| TGAGCAGTTGGTTGCTCTAG+TGG | 0.512644 | 8_1:+79170633 | None:intergenic |
| TCAAGAGGAACTAGGGTGAC+AGG | 0.515905 | 8_1:+79169938 | None:intergenic |
| TATGTTAAAACCATTCCTCA+TGG | 0.518173 | 8_1:-79168124 | Msa1216980:CDS |
| CAATAACAGATATTACCATA+TGG | 0.519571 | 8_1:-79166644 | Msa1216980:intron |
| TCAAAGAATTGTTCAGTGAT+GGG | 0.520811 | 8_1:+79169899 | None:intergenic |
| AGTCCAGCTATTTGCACTGA+TGG | 0.522005 | 8_1:+79173983 | None:intergenic |
| TTATGACATACTTCACATGA+TGG | 0.524848 | 8_1:-79168233 | Msa1216980:CDS |
| AGGAACTGTGGTTTCTGTAG+TGG | 0.525239 | 8_1:-79175673 | Msa1216980:CDS |
| ATATCTACCAATAATAGAAC+AGG | 0.527403 | 8_1:-79173832 | Msa1216980:intron |
| GATCCAATATTCGGAGCTGT+TGG | 0.528960 | 8_1:-79168157 | Msa1216980:CDS |
| ACTTAGACAACCACTAGCTA+TGG | 0.534826 | 8_1:-79167622 | Msa1216980:CDS |
| CAGGGTGATCCGTATCCCGT+GGG | 0.535686 | 8_1:+79167646 | None:intergenic |
| AAGCGTCCTCCAAGTCCTAC+GGG | 0.536177 | 8_1:+79171787 | None:intergenic |
| GTTGGAATTGGTGGCGAGGG+TGG | 0.536758 | 8_1:-79173894 | Msa1216980:CDS |
| AACGTTTGCCAAGTTAGTCA+AGG | 0.540677 | 8_1:+79167533 | None:intergenic |
| AACTGTGGTTTCTGTAGTGG+AGG | 0.540751 | 8_1:-79175670 | Msa1216980:CDS |
| GAATGGCAAAGGAAAATGTC+AGG | 0.541204 | 8_1:-79169371 | Msa1216980:intron |
| ACCTCCATTCCCATGAGGAA+TGG | 0.541814 | 8_1:+79168114 | None:intergenic |
| TAAGCGTCCTCCAAGTCCTA+CGG | 0.543232 | 8_1:+79171786 | None:intergenic |
| GCTGCATTTGCCCATCCAGT+AGG | 0.543690 | 8_1:+79168271 | None:intergenic |
| GTATCCACAACAATTCTATG+AGG | 0.545375 | 8_1:+79175642 | None:intergenic |
| ATAGGATGGTTACACAAAAG+AGG | 0.548092 | 8_1:-79169138 | Msa1216980:intron |
| ATGACCTGGTAAGCTGCAAA+AGG | 0.548275 | 8_1:+79170333 | None:intergenic |
| GTAAGGTCAAGCAATCCAAC+TGG | 0.548736 | 8_1:-79170471 | Msa1216980:CDS |
| AATCTGTAAACATATTTCCA+TGG | 0.549731 | 8_1:+79170397 | None:intergenic |
| AATATGTACGCAAACAAGCT+TGG | 0.550403 | 8_1:-79166300 | Msa1216980:CDS |
| CCCATCATAAACAAAGTTGT+GGG | 0.551995 | 8_1:+79170579 | None:intergenic |
| ACTTGGCGCTGAGTACTCAA+TGG | 0.553468 | 8_1:+79166772 | None:intergenic |
| ACCATTCTCCCAAATGTTGG+TGG | 0.554422 | 8_1:-79173855 | Msa1216980:CDS |
| TGTGAAGTTTGGAGCCCCAC+GGG | 0.554758 | 8_1:-79167661 | Msa1216980:CDS |
| TCTGAGGATGTTCCTGCGGA+GGG | 0.556719 | 8_1:-79175730 | Msa1216980:exon |
| TCCCATCATAAACAAAGTTG+TGG | 0.556830 | 8_1:+79170578 | None:intergenic |
| TTTGTTGTTTATAGGAACTG+TGG | 0.556852 | 8_1:-79175685 | Msa1216980:CDS |
| TTTAGCCGCCAAAACAGTGT+TGG | 0.556946 | 8_1:-79166821 | Msa1216980:CDS |
| CTAAAGCAACCACGACAAGC+AGG | 0.557424 | 8_1:-79168908 | Msa1216980:CDS |
| GTCTGAGGATGTTCCTGCGG+AGG | 0.557466 | 8_1:-79175731 | Msa1216980:exon |
| GCTGTTGGAATTGGTGGCGA+GGG | 0.559333 | 8_1:-79173897 | Msa1216980:CDS |
| TCATTGTGAGTCCTACTGGA+TGG | 0.559692 | 8_1:-79168282 | Msa1216980:CDS |
| CAGGAAAGCTTTCCTCCCAC+AGG | 0.560341 | 8_1:-79171740 | Msa1216980:intron |
| GAGGGTGGAATACTGTCAAA+TGG | 0.561194 | 8_1:-79173879 | Msa1216980:CDS |
| CAAGTTAGTCAAGGGTCCGT+TGG | 0.564476 | 8_1:+79167542 | None:intergenic |
| CATATTTATATAATGGGTGG+AGG | 0.565672 | 8_1:-79170495 | Msa1216980:CDS |
| AAAACCATTCCTCATGGGAA+TGG | 0.566418 | 8_1:-79168118 | Msa1216980:CDS |
| ATGACTTACTTTACATGATG+GGG | 0.568266 | 8_1:-79173932 | Msa1216980:CDS |
| AAACCATATGGAATATCTGA+TGG | 0.570401 | 8_1:-79169505 | Msa1216980:CDS |
| CAGCTGCAGCTACCCTCCGC+AGG | 0.570459 | 8_1:+79175718 | None:intergenic |
| AGTGGCATCGAATCCACTGA+TGG | 0.571465 | 8_1:-79166396 | Msa1216980:CDS |
| ACCATTCCTCATGGGAATGG+AGG | 0.571467 | 8_1:-79168115 | Msa1216980:CDS |
| TGCTTCGTGGAGAATGGCAA+AGG | 0.572388 | 8_1:-79169382 | Msa1216980:CDS |
| CAAATAGCTGGACTAGTGCT+GGG | 0.573476 | 8_1:-79173974 | Msa1216980:CDS |
| TGATGCATCAAGAGGAACTA+GGG | 0.574582 | 8_1:+79169931 | None:intergenic |
| AGGAGGCTGCAGATACAGGC+AGG | 0.575969 | 8_1:-79171815 | Msa1216980:CDS |
| TCAGGGTGATCCGTATCCCG+TGG | 0.576268 | 8_1:+79167645 | None:intergenic |
| CAAAGAATTGTTCAGTGATG+GGG | 0.577275 | 8_1:+79169900 | None:intergenic |
| TTGATGCATCAAGAGGAACT+AGG | 0.577314 | 8_1:+79169930 | None:intergenic |
| CATTGTGAGTCCTACTGGAT+GGG | 0.577818 | 8_1:-79168281 | Msa1216980:CDS |
| GATATTGCTGTTGGAATTGG+TGG | 0.578658 | 8_1:-79173903 | Msa1216980:CDS |
| AAGCCATGTGGTGGTTGTTG+CGG | 0.578746 | 8_1:+79166159 | None:intergenic |
| CCATTCTCCACGAAGCAAAG+AGG | 0.579727 | 8_1:+79169388 | None:intergenic |
| TATGACATACTTCACATGAT+GGG | 0.580387 | 8_1:-79168232 | Msa1216980:CDS |
| AAAGCCTCATAGAATTGTTG+TGG | 0.582784 | 8_1:-79175646 | Msa1216980:CDS |
| TTTGACATGGACATGAGTGC+AGG | 0.583613 | 8_1:-79168794 | Msa1216980:CDS |
| CTGTGAAGTTTGGAGCCCCA+CGG | 0.585376 | 8_1:-79167662 | Msa1216980:CDS |
| TTGTATCTCCCTGCTTGTCG+TGG | 0.586926 | 8_1:+79168899 | None:intergenic |
| AATTGTTGAATGATAATGAA+TGG | 0.593887 | 8_1:+79166037 | None:intergenic |
| GAACTCCCAACATCTCGGTT+AGG | 0.595333 | 8_1:+79169068 | None:intergenic |
| GGTACCATTCTCCCAAATGT+TGG | 0.596301 | 8_1:-79173858 | Msa1216980:CDS |
| CAGAATATTAAGCAATGTGG+AGG | 0.596519 | 8_1:-79166337 | Msa1216980:CDS |
| TGCTGTTGGAATTGGTGGCG+AGG | 0.598178 | 8_1:-79173898 | Msa1216980:CDS |
| CCCGTTAAAGTCTTAGCTAG+TGG | 0.599921 | 8_1:-79166414 | Msa1216980:CDS |
| CAAGTGAACTCCCAACATCT+CGG | 0.600515 | 8_1:+79169063 | None:intergenic |
| ACGTTTGCCAAGTTAGTCAA+GGG | 0.602796 | 8_1:+79167534 | None:intergenic |
| GTACATATTTATATAATGGG+TGG | 0.607034 | 8_1:-79170498 | Msa1216980:CDS |
| ATGTTAAAACCATTCCTCAT+GGG | 0.608056 | 8_1:-79168123 | Msa1216980:CDS |
| GTATTGCAAACAATGAAACC+AGG | 0.608873 | 8_1:-79167585 | Msa1216980:CDS |
| ATCTGCCACGAAGCCCAAGA+AGG | 0.610019 | 8_1:-79168054 | Msa1216980:intron |
| TGGGTCTGAGGATGTTCCTG+CGG | 0.610076 | 8_1:-79175734 | Msa1216980:exon |
| AATATTACTGTACTAACCAA+CGG | 0.611883 | 8_1:-79167558 | Msa1216980:CDS |
| AGCAAGACCATAAAGAGTGT+CGG | 0.617790 | 8_1:+79168081 | None:intergenic |
| CTGTATCAGTCAGCCAAGGT+AGG | 0.617978 | 8_1:-79166273 | Msa1216980:CDS |
| CCTCGACAGTGTGGTGACCA+TGG | 0.619192 | 8_1:-79170414 | Msa1216980:CDS |
| CAGGGAATGACAACAATAGG+AGG | 0.619510 | 8_1:-79171832 | Msa1216980:CDS |
| TGTTGGGAGTTCACTTGACA+GGG | 0.619735 | 8_1:-79169057 | Msa1216980:CDS |
| GGTCGTGATGATATACCAGT+TGG | 0.625658 | 8_1:-79168211 | Msa1216980:CDS |
| AGTACAGTAATATTGGACCC+TGG | 0.625884 | 8_1:+79167567 | None:intergenic |
| CTGAAATCCAAGGTTAAGAG+TGG | 0.627995 | 8_1:-79166182 | Msa1216980:exon |
| TAAAGCAACCACGACAAGCA+GGG | 0.630858 | 8_1:-79168907 | Msa1216980:CDS |
| GATGGTTACACAAAAGAGGT+AGG | 0.631222 | 8_1:-79169134 | Msa1216980:CDS |
| ATTGTGTTTGATGCATCAAG+AGG | 0.634012 | 8_1:+79169923 | None:intergenic |
| GTGTTATTAATACCTGTGGG+AGG | 0.634886 | 8_1:+79171728 | None:intergenic |
| TCCCAAACTTCCATAGCTAG+TGG | 0.639935 | 8_1:+79167612 | None:intergenic |
| CTATTATAGGTAGATTAGAA+GGG | 0.641988 | 8_1:-79166735 | Msa1216980:CDS |
| ACCACACTGTCGAGGCACAC+AGG | 0.642222 | 8_1:+79170422 | None:intergenic |
| CATAGTGGTCATATTCAACA+AGG | 0.643535 | 8_1:-79169421 | Msa1216980:CDS |
| ACTGTGGTTTCTGTAGTGGA+GGG | 0.645732 | 8_1:-79175669 | Msa1216980:CDS |
| AGTAAACCCAATAATCACAA+AGG | 0.646458 | 8_1:-79169583 | Msa1216980:CDS |
| TAGTTGCAAATGAACTCACT+TGG | 0.647844 | 8_1:+79166755 | None:intergenic |
| TGGCCGCAACAACCACCACA+TGG | 0.648374 | 8_1:-79166162 | Msa1216980:three_prime_UTR |
| CCATGGTCACCACACTGTCG+AGG | 0.655257 | 8_1:+79170414 | None:intergenic |
| CGATCTGTATCAGTCAGCCA+AGG | 0.661216 | 8_1:-79166277 | Msa1216980:CDS |
| AGTCAGAATATTAAGCAATG+TGG | 0.665146 | 8_1:-79166340 | Msa1216980:CDS |
| AGCAGTAATGCAGAAGACAA+AGG | 0.665677 | 8_1:-79166901 | Msa1216980:CDS |
| ACCTGTGTGCCTCGACAGTG+TGG | 0.670023 | 8_1:-79170423 | Msa1216980:CDS |
| TATTGCAAACAATGAAACCA+GGG | 0.678984 | 8_1:-79167584 | Msa1216980:CDS |
| AGGTGGTCCAGACTCAGTAA+GGG | 0.681287 | 8_1:-79169114 | Msa1216980:CDS |
| TACAGGCAGGCCATTCCCGT+AGG | 0.682638 | 8_1:-79171802 | Msa1216980:CDS |
| ATAGTGGTAGATGAGAAACA+TGG | 0.684479 | 8_1:-79166369 | Msa1216980:CDS |
| CTGCACCTAGAATTTCACCC+AGG | 0.696015 | 8_1:+79166487 | None:intergenic |
| GGTTACACAAAAGAGGTAGG+TGG | 0.708754 | 8_1:-79169131 | Msa1216980:CDS |
| AATTGGAGTCATCCTCACGA+TGG | 0.723657 | 8_1:-79166228 | Msa1216980:CDS |
| ATGTAACCTCCATTCCCATG+AGG | 0.729135 | 8_1:+79168109 | None:intergenic |
| AGGGTGATCCGTATCCCGTG+GGG | 0.734001 | 8_1:+79167647 | None:intergenic |
| GAAGCTTTGAAGAACAGACG+AGG | 0.750728 | 8_1:-79166251 | Msa1216980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATATATATATTAT+AGG | + | chr8_1:79170921-79170940 | None:intergenic | 0.0% |
| !! | AATCATTTATATTAAACAAA+CGG | - | chr8_1:79166609-79166628 | Msa1216980:intron | 10.0% |
| !! | TATATCCATAAAAATATAAA+TGG | + | chr8_1:79167120-79167139 | None:intergenic | 10.0% |
| !!! | TATATTTTTATGGATATAAT+AGG | - | chr8_1:79167122-79167141 | Msa1216980:intron | 10.0% |
| !!! | GAAAATTATACTATTTTTTT+TGG | + | chr8_1:79167406-79167425 | None:intergenic | 10.0% |
| !!! | CTATTTTTTTTTCAAAAATA+AGG | - | chr8_1:79168323-79168342 | Msa1216980:intron | 10.0% |
| !!! | AAAAAATATTTTTCAACTTT+TGG | - | chr8_1:79168557-79168576 | Msa1216980:intron | 10.0% |
| !! | TACTTAATTTAACATATTAA+GGG | + | chr8_1:79168874-79168893 | None:intergenic | 10.0% |
| !! | TTACTTAATTTAACATATTA+AGG | + | chr8_1:79168875-79168894 | None:intergenic | 10.0% |
| !! | AATATGTTAAATTAAGTAAA+TGG | - | chr8_1:79168876-79168895 | Msa1216980:CDS | 10.0% |
| !! | ATATAAATATCTGTAAAATT+TGG | + | chr8_1:79171568-79171587 | None:intergenic | 10.0% |
| !! | ATTCTTATATGAAATTTAAA+AGG | - | chr8_1:79171687-79171706 | Msa1216980:intron | 10.0% |
| !!! | ATGTATATATTGTTTTATAT+AGG | - | chr8_1:79171804-79171823 | Msa1216980:CDS | 10.0% |
| !!! | AATTTTTTATTTTGAAAGTT+TGG | + | chr8_1:79172952-79172971 | None:intergenic | 10.0% |
| !! | AAACTTTCAAAATAAAAAAT+TGG | - | chr8_1:79172951-79172970 | Msa1216980:intron | 10.0% |
| !! | AACTTTCAAAATAAAAAATT+GGG | - | chr8_1:79172952-79172971 | Msa1216980:intron | 10.0% |
| !!! | TAATTTATATCAATAGTTTT+TGG | + | chr8_1:79173171-79173190 | None:intergenic | 10.0% |
| !!! | GTGTTTTTTATTTATTTTTT+AGG | + | chr8_1:79173374-79173393 | None:intergenic | 10.0% |
| !!! | TTATTATTTAGTTTTCAATT+TGG | + | chr8_1:79174676-79174695 | None:intergenic | 10.0% |
| !! | ATCATTTATATTAAACAAAC+GGG | - | chr8_1:79166610-79166629 | Msa1216980:intron | 15.0% |
| !!! | ATCAATAAAAATTGATTTGT+TGG | + | chr8_1:79166672-79166691 | None:intergenic | 15.0% |
| !!! | GTATTCCATTTATATTTTTA+TGG | - | chr8_1:79167112-79167131 | Msa1216980:intron | 15.0% |
| !! | TATTGTAAACTAACTATAAA+TGG | + | chr8_1:79167180-79167199 | None:intergenic | 15.0% |
| !!! | TTTTATATGCAATTTTGTTT+AGG | - | chr8_1:79167254-79167273 | Msa1216980:intron | 15.0% |
| !!! | TTTATATGCAATTTTGTTTA+GGG | - | chr8_1:79167255-79167274 | Msa1216980:intron | 15.0% |
| !! | CTTCATATATTATATATGAA+GGG | + | chr8_1:79167340-79167359 | None:intergenic | 15.0% |
| !!! | ACAAATCATACTATTTTTTT+GGG | + | chr8_1:79167428-79167447 | None:intergenic | 15.0% |
| !!! | AACAAATCATACTATTTTTT+TGG | + | chr8_1:79167429-79167448 | None:intergenic | 15.0% |
| !!! | GTTTAAAATAATATCTTCAA+TGG | - | chr8_1:79167446-79167465 | Msa1216980:intron | 15.0% |
| !!! | ACTATTCACTTTTTTTTAAA+AGG | + | chr8_1:79168120-79168139 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCAAAAATAAGG+AGG | - | chr8_1:79168326-79168345 | Msa1216980:intron | 15.0% |
| !!! | TAAAAAATCTAAAGAGTTTT+TGG | + | chr8_1:79168444-79168463 | None:intergenic | 15.0% |
| !! | TAATAAATACTTAATGTTTG+TGG | + | chr8_1:79168534-79168553 | None:intergenic | 15.0% |
| !! | GTACAAATTTAACATATTAA+GGG | + | chr8_1:79168834-79168853 | None:intergenic | 15.0% |
| !! | TGTACAAATTTAACATATTA+AGG | + | chr8_1:79168835-79168854 | None:intergenic | 15.0% |
| !! | ACAAATTCTGAATATTTATA+GGG | + | chr8_1:79168903-79168922 | None:intergenic | 15.0% |
| !! | AACAAATTCTGAATATTTAT+AGG | + | chr8_1:79168904-79168923 | None:intergenic | 15.0% |
| !!! | AAGTGTGATTTTATTTTATA+GGG | + | chr8_1:79168933-79168952 | None:intergenic | 15.0% |
| !!! | AAAGTGTGATTTTATTTTAT+AGG | + | chr8_1:79168934-79168953 | None:intergenic | 15.0% |
| !!! | AAAATTTATGTCAACATTTT+TGG | + | chr8_1:79168994-79169013 | None:intergenic | 15.0% |
| !!! | GGGATTTTATTTTATTTTAT+TGG | - | chr8_1:79169305-79169324 | Msa1216980:intron | 15.0% |
| !! | AAAAAGTTTAAATATTTCTC+TGG | + | chr8_1:79170977-79170996 | None:intergenic | 15.0% |
| !! | AACTAAGCTATTTATAATTA+AGG | + | chr8_1:79171066-79171085 | None:intergenic | 15.0% |
| !! | TTAAAGAAATGAAAAAAGTA+TGG | + | chr8_1:79171495-79171514 | None:intergenic | 15.0% |
| !!! | TTTGATTTTCATTTTTTTGT+TGG | - | chr8_1:79172841-79172860 | Msa1216980:intron | 15.0% |
| !! | TAATGTAGTAAACTTTAATT+TGG | - | chr8_1:79173449-79173468 | Msa1216980:intron | 15.0% |
| !!! | AATGTAGTAAACTTTAATTT+GGG | - | chr8_1:79173450-79173469 | Msa1216980:intron | 15.0% |
| !! | AATACACTAAAAATTATTTC+AGG | - | chr8_1:79174081-79174100 | Msa1216980:intron | 15.0% |
| !! | CTGATAACTATAATTAATTA+TGG | - | chr8_1:79175236-79175255 | Msa1216980:intron | 15.0% |
| !!! | TCAATTTTTATTGATCCATT+TGG | - | chr8_1:79166677-79166696 | Msa1216980:CDS | 20.0% |
| !!! | AGTTTCTGTAGTATTTTTTT+CGG | + | chr8_1:79166813-79166832 | None:intergenic | 20.0% |
| !!! | AAATGGTTTATTCTAAAAAG+CGG | + | chr8_1:79166873-79166892 | None:intergenic | 20.0% |
| !! | TAGTTCAAAGACTAAATAAA+TGG | + | chr8_1:79166890-79166909 | None:intergenic | 20.0% |
| !!! | TTATATGCAATTTTGTTTAG+GGG | - | chr8_1:79167256-79167275 | Msa1216980:intron | 20.0% |
| !!! | CTATAGGAATATATGATTTT+AGG | + | chr8_1:79167302-79167321 | None:intergenic | 20.0% |
| !! | TTATATATGAAGGGAATATA+TGG | + | chr8_1:79167331-79167350 | None:intergenic | 20.0% |
| !! | GCTTCATATATTATATATGA+AGG | + | chr8_1:79167341-79167360 | None:intergenic | 20.0% |
| !! | ATTATTAATGCAAGAAATGT+TGG | + | chr8_1:79167609-79167628 | None:intergenic | 20.0% |
| !!! | TATTTCTACTTAAGTTGATT+TGG | - | chr8_1:79167756-79167775 | Msa1216980:intron | 20.0% |
| !! | TGTAAAGTAAGTCATAAATT+TGG | + | chr8_1:79167845-79167864 | None:intergenic | 20.0% |
| !! | ACTGCTCAAAAAAAAAAATT+GGG | + | chr8_1:79168090-79168109 | None:intergenic | 20.0% |
| !! | AACTGCTCAAAAAAAAAAAT+TGG | + | chr8_1:79168091-79168110 | None:intergenic | 20.0% |
| !! | GACTTAAATGAAAAACTATT+AGG | - | chr8_1:79168281-79168300 | Msa1216980:CDS | 20.0% |
| !! | ACTTTACTTATTCATCTTAA+AGG | + | chr8_1:79168665-79168684 | None:intergenic | 20.0% |
| !!! | ACATTTTCCTTAAGTATTTT+AGG | - | chr8_1:79168966-79168985 | Msa1216980:intron | 20.0% |
| !!! | CATTTTCCTTAAGTATTTTA+GGG | - | chr8_1:79168967-79168986 | Msa1216980:intron | 20.0% |
| !!! | TGATGATGGAAAAATTTTAT+AGG | - | chr8_1:79169030-79169049 | Msa1216980:intron | 20.0% |
| !!! | GATGATGGAAAAATTTTATA+GGG | - | chr8_1:79169031-79169050 | Msa1216980:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+AGG | - | chr8_1:79169091-79169110 | Msa1216980:CDS | 20.0% |
| !! | ACAAAATTCTGGATATTTAT+AGG | - | chr8_1:79169121-79169140 | Msa1216980:CDS | 20.0% |
| !! | AAATGGAAGTCAATAAATAA+TGG | + | chr8_1:79169255-79169274 | None:intergenic | 20.0% |
| !! | TACTTCATATATTCAATCTT+TGG | - | chr8_1:79169351-79169370 | Msa1216980:intron | 20.0% |
| !! | TGAAACTTAAAAGAGTTTAA+TGG | + | chr8_1:79169623-79169642 | None:intergenic | 20.0% |
| !! | ATGTAAATAAATGAAGCAAT+TGG | - | chr8_1:79169788-79169807 | Msa1216980:intron | 20.0% |
| !! | TGTAAATAAATGAAGCAATT+GGG | - | chr8_1:79169789-79169808 | Msa1216980:intron | 20.0% |
| !! | TTAGATATTGATGCAAATTA+TGG | - | chr8_1:79170016-79170035 | Msa1216980:intron | 20.0% |
| !! | AAATACATTGTTATGAATGT+AGG | - | chr8_1:79170084-79170103 | Msa1216980:intron | 20.0% |
| !! | GATCTCTAATTTAAATTTGT+TGG | - | chr8_1:79170204-79170223 | Msa1216980:intron | 20.0% |
| !!! | TATTCATTTTATAGATTGGT+CGG | + | chr8_1:79170246-79170265 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTAACCATTT+TGG | + | chr8_1:79170308-79170327 | None:intergenic | 20.0% |
| !! | ATAAACAATGTTAACTTATG+TGG | + | chr8_1:79170569-79170588 | None:intergenic | 20.0% |
| !! | TAACATTGTTTATGTGAATA+TGG | - | chr8_1:79170576-79170595 | Msa1216980:CDS | 20.0% |
| !! | TTCTTGACTGATTATTTATA+GGG | + | chr8_1:79170612-79170631 | None:intergenic | 20.0% |
| !! | ACAAATACTAACATAACTAA+TGG | - | chr8_1:79170836-79170855 | Msa1216980:intron | 20.0% |
| !!! | TTAAAATCGTTAGTTTGTAA+TGG | + | chr8_1:79170894-79170913 | None:intergenic | 20.0% |
| !! | TGTGGTACATATTTATATAA+TGG | - | chr8_1:79171280-79171299 | Msa1216980:intron | 20.0% |
| !! | GTGGTACATATTTATATAAT+GGG | - | chr8_1:79171281-79171300 | Msa1216980:intron | 20.0% |
| !! | TAAAGAAAACACTAATAAAC+AGG | + | chr8_1:79171591-79171610 | None:intergenic | 20.0% |
| !!! | TTAACAGAGTTATTTTATGT+GGG | - | chr8_1:79172141-79172160 | Msa1216980:intron | 20.0% |
| !! | ATTACTTCAAATAAACCATA+TGG | - | chr8_1:79172265-79172284 | Msa1216980:intron | 20.0% |
| !!! | TTTTTTCTATCTCTACTTTT+TGG | + | chr8_1:79172505-79172524 | None:intergenic | 20.0% |
| !! | CTTAGATGTATGTTTAATAA+TGG | - | chr8_1:79172764-79172783 | Msa1216980:intron | 20.0% |
| !! | AGAAAAATAAGAATACCTTA+AGG | + | chr8_1:79173065-79173084 | None:intergenic | 20.0% |
| !! | AGTAATTGAAAGAAACAATT+AGG | + | chr8_1:79173090-79173109 | None:intergenic | 20.0% |
| !! | GATATAAATTAAGCTCAATT+AGG | - | chr8_1:79173180-79173199 | Msa1216980:intron | 20.0% |
| !!! | TTATTTATTTTTTAGGTGCT+AGG | + | chr8_1:79173367-79173386 | None:intergenic | 20.0% |
| !! | ACAAATACTAAACAATACTA+AGG | + | chr8_1:79173778-79173797 | None:intergenic | 20.0% |
| !!! | AAAAATTATTTCAGGTATAC+AGG | - | chr8_1:79174089-79174108 | Msa1216980:intron | 20.0% |
| !! | AAAAACACTTAAATGGAATA+AGG | - | chr8_1:79174588-79174607 | Msa1216980:intron | 20.0% |
| !! | TAAGGTATAAGTCTTTAATT+TGG | - | chr8_1:79174606-79174625 | Msa1216980:intron | 20.0% |
| !!! | TCTTTAATTTGGTGATTTTA+GGG | - | chr8_1:79174617-79174636 | Msa1216980:intron | 20.0% |
| !!! | ATAATAATGACATTTTTCGT+AGG | - | chr8_1:79174689-79174708 | Msa1216980:intron | 20.0% |
| !! | AACAACTTTGAATATTCTAT+TGG | + | chr8_1:79174766-79174785 | None:intergenic | 20.0% |
| !!! | AATTGTTGAATGATAATGAA+TGG | + | chr8_1:79175748-79175767 | None:intergenic | 20.0% |
| !!! | ACAGTGTTTTTGTTGTTTAT+AGG | - | chr8_1:79166089-79166108 | Msa1216980:three_prime_UTR | 25.0% |
| ! | AAATCAGAAGAGAAAAAGAA+AGG | + | chr8_1:79166319-79166338 | None:intergenic | 25.0% |
| ! | TCAAACATGTAATCAAGATT+AGG | + | chr8_1:79166392-79166411 | None:intergenic | 25.0% |
| !! | TCCATTTGGATTTTATAGAA+AGG | - | chr8_1:79166691-79166710 | Msa1216980:CDS | 25.0% |
| ! | TCCTTTCTATAAAATCCAAA+TGG | + | chr8_1:79166695-79166714 | None:intergenic | 25.0% |
| ! | AACATAGTCTAATAGATCTT+TGG | + | chr8_1:79166731-79166750 | None:intergenic | 25.0% |
| !! | AGACTATGTTTTCATACATT+TGG | - | chr8_1:79166741-79166760 | Msa1216980:CDS | 25.0% |
| !!! | TTTCTGTAGTATTTTTTTCG+GGG | + | chr8_1:79166811-79166830 | None:intergenic | 25.0% |
| !!! | GTTTCTGTAGTATTTTTTTC+GGG | + | chr8_1:79166812-79166831 | None:intergenic | 25.0% |
| ! | ACACAATTAAGAGACTAAAT+TGG | + | chr8_1:79166924-79166943 | None:intergenic | 25.0% |
| !!! | GAATATATGGTTTTGTCTAT+AGG | + | chr8_1:79167318-79167337 | None:intergenic | 25.0% |
| ! | ATTCTTAATGCAAGAAATGT+TGG | + | chr8_1:79167520-79167539 | None:intergenic | 25.0% |
| !! | TATTATTCTTGTGTTTTGCA+AGG | + | chr8_1:79167738-79167757 | None:intergenic | 25.0% |
| ! | TTATGACTTACTTTACATGA+TGG | - | chr8_1:79167848-79167867 | Msa1216980:intron | 25.0% |
| ! | TATGACTTACTTTACATGAT+GGG | - | chr8_1:79167849-79167868 | Msa1216980:intron | 25.0% |
| ! | ATATCTACCAATAATAGAAC+AGG | - | chr8_1:79167950-79167969 | Msa1216980:intron | 25.0% |
| ! | ATTAGTACCTGTTCTATTAT+TGG | + | chr8_1:79167960-79167979 | None:intergenic | 25.0% |
| ! | ACTACTAGTATACATAAAAG+AGG | + | chr8_1:79167988-79168007 | None:intergenic | 25.0% |
| ! | TGCCCATAAAAATAAAAAGT+GGG | + | chr8_1:79168034-79168053 | None:intergenic | 25.0% |
| ! | ATGCCCATAAAAATAAAAAG+TGG | + | chr8_1:79168035-79168054 | None:intergenic | 25.0% |
| !!! | TCGTTTTTAAGTGTTGTTTT+AGG | - | chr8_1:79168178-79168197 | Msa1216980:CDS | 25.0% |
| !!! | TCGTTTTTAAGTGTTGTTTT+AGG | - | chr8_1:79168178-79168197 | Msa1216980:CDS | 25.0% |
| !!! | AATCTAAAGAGTTTTTGGTA+GGG | + | chr8_1:79168439-79168458 | None:intergenic | 25.0% |
| !!! | AAATCTAAAGAGTTTTTGGT+AGG | + | chr8_1:79168440-79168459 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTATCAAGTAGCC+TGG | - | chr8_1:79168625-79168644 | Msa1216980:intron | 25.0% |
| !! | TGTTGACATAAATTTTTGAC+AGG | - | chr8_1:79168998-79169017 | Msa1216980:intron | 25.0% |
| !! | GTTGACATAAATTTTTGACA+GGG | - | chr8_1:79168999-79169018 | Msa1216980:intron | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+AGG | - | chr8_1:79169062-79169081 | Msa1216980:CDS | 25.0% |
| ! | AAGGACTAAAAACAAAATTC+TGG | - | chr8_1:79169110-79169129 | Msa1216980:CDS | 25.0% |
| !! | TTTGGGGTTAATTAAGTAAA+TGG | + | chr8_1:79169149-79169168 | None:intergenic | 25.0% |
| ! | TTGATGTAAATCGTAGAAAT+GGG | + | chr8_1:79169282-79169301 | None:intergenic | 25.0% |
| ! | TTTGATGTAAATCGTAGAAA+TGG | + | chr8_1:79169283-79169302 | None:intergenic | 25.0% |
| ! | TTCTACGATTTACATCAAAA+AGG | - | chr8_1:79169284-79169303 | Msa1216980:intron | 25.0% |
| ! | TCTACGATTTACATCAAAAA+GGG | - | chr8_1:79169285-79169304 | Msa1216980:intron | 25.0% |
| !!! | TATACTTTTTCTTTAGGGAA+TGG | + | chr8_1:79169597-79169616 | None:intergenic | 25.0% |
| ! | AACTTAAAAGAGTTTAATGG+TGG | + | chr8_1:79169620-79169639 | None:intergenic | 25.0% |
| ! | TCATTTATTTACATCACTAC+AGG | + | chr8_1:79169782-79169801 | None:intergenic | 25.0% |
| !!! | TTTGCGACACTTTTTTTTTA+AGG | - | chr8_1:79169825-79169844 | Msa1216980:CDS | 25.0% |
| !! | TTTGTGTTATTAATACCTGT+GGG | + | chr8_1:79170060-79170079 | None:intergenic | 25.0% |
| ! | GACCAATCTATAAAATGAAT+AGG | - | chr8_1:79170245-79170264 | Msa1216980:intron | 25.0% |
| !! | TGCCTATTCATTTTATAGAT+TGG | + | chr8_1:79170250-79170269 | None:intergenic | 25.0% |
| !!! | CCTATTTCTTTTAACCATTT+TGG | + | chr8_1:79170278-79170297 | None:intergenic | 25.0% |
| ! | CCAAAATGGTTAAAAGAAAT+AGG | - | chr8_1:79170275-79170294 | Msa1216980:intron | 25.0% |
| !!! | TCATGATTTTTCGAGTTTTA+TGG | - | chr8_1:79170423-79170442 | Msa1216980:CDS | 25.0% |
| ! | GAATGAAGATGATATTCAAT+TGG | - | chr8_1:79170452-79170471 | Msa1216980:CDS | 25.0% |
| !!! | TGTTTTAGATTGAAGAAAAC+TGG | - | chr8_1:79170485-79170504 | Msa1216980:CDS | 25.0% |
| ! | GTTCTTGACTGATTATTTAT+AGG | + | chr8_1:79170613-79170632 | None:intergenic | 25.0% |
| ! | AAATAATCAGTCAAGAACTT+TGG | - | chr8_1:79170615-79170634 | Msa1216980:CDS | 25.0% |
| !!! | TAGTATTTGTTTTCTTTCGT+CGG | + | chr8_1:79170826-79170845 | None:intergenic | 25.0% |
| ! | TGGACTTGAAAAACTATTAT+AGG | + | chr8_1:79170957-79170976 | None:intergenic | 25.0% |
| ! | AGGTTTAATAACTACATTAG+AGG | + | chr8_1:79171046-79171065 | None:intergenic | 25.0% |
| ! | CTAATTTGATCATGATATCA+GGG | - | chr8_1:79171110-79171129 | Msa1216980:intron | 25.0% |
| !! | GTACATATTTATATAATGGG+TGG | - | chr8_1:79171284-79171303 | Msa1216980:intron | 25.0% |
| ! | AATCTGTAAACATATTTCCA+TGG | + | chr8_1:79171388-79171407 | None:intergenic | 25.0% |
| ! | AGATATTGAATTCTGCATAA+GGG | + | chr8_1:79171421-79171440 | None:intergenic | 25.0% |
| ! | AAGATATTGAATTCTGCATA+AGG | + | chr8_1:79171422-79171441 | None:intergenic | 25.0% |
| ! | TATGCAGAATTCAATATCTT+TGG | - | chr8_1:79171422-79171441 | Msa1216980:intron | 25.0% |
| !! | GTATATTTCTGTTAGATACA+GGG | + | chr8_1:79171760-79171779 | None:intergenic | 25.0% |
| !! | TGTATATTTCTGTTAGATAC+AGG | + | chr8_1:79171761-79171780 | None:intergenic | 25.0% |
| ! | GTATCTAACAGAAATATACA+TGG | - | chr8_1:79171761-79171780 | Msa1216980:CDS | 25.0% |
| ! | TTTATATAGGTGATTCATTC+TGG | - | chr8_1:79171817-79171836 | Msa1216980:CDS | 25.0% |
| !!! | GTTAACAGAGTTATTTTATG+TGG | - | chr8_1:79172140-79172159 | Msa1216980:intron | 25.0% |
| ! | TTATCTCCTTTGTGATTATT+GGG | + | chr8_1:79172208-79172227 | None:intergenic | 25.0% |
| ! | ATTATCTCCTTTGTGATTAT+TGG | + | chr8_1:79172209-79172228 | None:intergenic | 25.0% |
| !!! | AGATAATGAATTTGCTGAAA+TGG | - | chr8_1:79172222-79172241 | Msa1216980:intron | 25.0% |
| !! | ACTTTTAGGCCATTAAATAA+TGG | + | chr8_1:79172310-79172329 | None:intergenic | 25.0% |
| ! | CAAAATTAGCAACTGAAAAA+AGG | + | chr8_1:79172548-79172567 | None:intergenic | 25.0% |
| !!! | CTTTTTTCAGTTGCTAATTT+TGG | - | chr8_1:79172546-79172565 | Msa1216980:intron | 25.0% |
| !!! | TTTTTCTAGTAGTGACATAT+AGG | - | chr8_1:79172582-79172601 | Msa1216980:intron | 25.0% |
| !!! | TTTTCTAGTAGTGACATATA+GGG | - | chr8_1:79172583-79172602 | Msa1216980:intron | 25.0% |
| !! | TAATGCAACTTGTGTTTTAT+AGG | - | chr8_1:79172626-79172645 | Msa1216980:intron | 25.0% |
| ! | ATTTATGACATGTCTTTGAT+TGG | - | chr8_1:79172791-79172810 | Msa1216980:intron | 25.0% |
| !!! | TCATTTTTTTGTTGGTTCAA+AGG | - | chr8_1:79172849-79172868 | Msa1216980:intron | 25.0% |
| ! | TAAGTTACTTCTTTGTAGTA+GGG | + | chr8_1:79172925-79172944 | None:intergenic | 25.0% |
| !!! | TTGTGAACCTTTTTTCAATT+TGG | + | chr8_1:79173146-79173165 | None:intergenic | 25.0% |
| ! | ATTCTCTATCTTCAATTCAT+TGG | - | chr8_1:79173964-79173983 | Msa1216980:CDS | 25.0% |
| ! | AATATTACTGTACTAACCAA+CGG | - | chr8_1:79174224-79174243 | Msa1216980:intron | 25.0% |
| !!! | AAATATAAGCTCTAGAATTC+AGG | - | chr8_1:79174283-79174302 | Msa1216980:intron | 25.0% |
| ! | AAAGTAGATTACAGAGTAAA+CGG | - | chr8_1:79174522-79174541 | Msa1216980:intron | 25.0% |
| !!! | CCATTTAAGTGTTTTTTGAA+AGG | + | chr8_1:79174584-79174603 | None:intergenic | 25.0% |
| ! | CCTTTCAAAAAACACTTAAA+TGG | - | chr8_1:79174581-79174600 | Msa1216980:intron | 25.0% |
| !!! | GTCTTTAATTTGGTGATTTT+AGG | - | chr8_1:79174616-79174635 | Msa1216980:intron | 25.0% |
| ! | ACAAAGTTTCAAAATAATGC+AGG | - | chr8_1:79174832-79174851 | Msa1216980:intron | 25.0% |
| ! | AGTTCATTTGCAACTATTAT+AGG | - | chr8_1:79175034-79175053 | Msa1216980:intron | 25.0% |
| ! | ACTATTATAGGTAGATTAGA+AGG | - | chr8_1:79175046-79175065 | Msa1216980:intron | 25.0% |
| ! | CTATTATAGGTAGATTAGAA+GGG | - | chr8_1:79175047-79175066 | Msa1216980:intron | 25.0% |
| ! | CATATGGTAATATCTGTTAT+TGG | + | chr8_1:79175140-79175159 | None:intergenic | 25.0% |
| ! | CAATAACAGATATTACCATA+TGG | - | chr8_1:79175138-79175157 | Msa1216980:intron | 25.0% |
| ! | CGAACTAGAAAAAATAGTTA+TGG | + | chr8_1:79175177-79175196 | None:intergenic | 25.0% |
| !!! | TCAGCAACTTTTTCTTTTTT+AGG | + | chr8_1:79175584-79175603 | None:intergenic | 25.0% |
| ! | ACGTATTGTTTCTTTCTTTC+TGG | - | chr8_1:79166028-79166047 | Msa1216980:three_prime_UTR | 30.0% |
| ! | CGTATTGTTTCTTTCTTTCT+GGG | - | chr8_1:79166029-79166048 | Msa1216980:three_prime_UTR | 30.0% |
| !! | TTTGTTGTTTATAGGAACTG+TGG | - | chr8_1:79166097-79166116 | Msa1216980:three_prime_UTR | 30.0% |
| CAACACTTCACAATTTCAAT+TGG | - | chr8_1:79166211-79166230 | Msa1216980:CDS | 30.0% | |
| ATCTTGATTACATGTTTGAC+CGG | - | chr8_1:79166393-79166412 | Msa1216980:CDS | 30.0% | |
| TGAGTCAAACTAAAGTTTAC+CGG | + | chr8_1:79166415-79166434 | None:intergenic | 30.0% | |
| TGACAGCTATGAAGAAAATA+TGG | + | chr8_1:79166465-79166484 | None:intergenic | 30.0% | |
| TGACAGCTATGAAGAAAATA+TGG | + | chr8_1:79166465-79166484 | None:intergenic | 30.0% | |
| GTAGTATTATTAAACACACG+TGG | + | chr8_1:79167584-79167603 | None:intergenic | 30.0% | |
| CCTCTATATCAATGTTCTTA+CGG | - | chr8_1:79167692-79167711 | Msa1216980:intron | 30.0% | |
| !! | TTGATTTGGTCCTTAATATC+AGG | - | chr8_1:79167770-79167789 | Msa1216980:intron | 30.0% |
| ATGACTTACTTTACATGATG+GGG | - | chr8_1:79167850-79167869 | Msa1216980:intron | 30.0% | |
| ATAAAAATAAAAAGTGGGGG+CGG | + | chr8_1:79168029-79168048 | None:intergenic | 30.0% | |
| CCCATAAAAATAAAAAGTGG+GGG | + | chr8_1:79168032-79168051 | None:intergenic | 30.0% | |
| !!! | CCCCCACTTTTTATTTTTAT+GGG | - | chr8_1:79168029-79168048 | Msa1216980:intron | 30.0% |
| GCCCATAAAAATAAAAAGTG+GGG | + | chr8_1:79168033-79168052 | None:intergenic | 30.0% | |
| AAAAATTAGCTGCTGTGTAA+AGG | + | chr8_1:79168064-79168083 | None:intergenic | 30.0% | |
| ! | AGATGAATAAGTAAAGTGTC+CGG | - | chr8_1:79168668-79168687 | Msa1216980:intron | 30.0% |
| ! | AATATAAGTCACCGTGATTT+TGG | + | chr8_1:79168735-79168754 | None:intergenic | 30.0% |
| TACTTAAGGAAAATGTCACA+GGG | + | chr8_1:79168962-79168981 | None:intergenic | 30.0% | |
| ATACTTAAGGAAAATGTCAC+AGG | + | chr8_1:79168963-79168982 | None:intergenic | 30.0% | |
| TTTGGTCCCTAAAATACTTA+AGG | + | chr8_1:79168976-79168995 | None:intergenic | 30.0% | |
| !! | AATGGAAAATGCTATTTCTC+AGG | - | chr8_1:79169186-79169205 | Msa1216980:intron | 30.0% |
| GTCAATAAATAATGGTTGAG+CGG | + | chr8_1:79169247-79169266 | None:intergenic | 30.0% | |
| TGATGTAAATCGTAGAAATG+GGG | + | chr8_1:79169281-79169300 | None:intergenic | 30.0% | |
| !! | ATTCAATCTTTGGAGTAAAC+TGG | - | chr8_1:79169361-79169380 | Msa1216980:intron | 30.0% |
| !! | TTCAATCTTTGGAGTAAACT+GGG | - | chr8_1:79169362-79169381 | Msa1216980:intron | 30.0% |
| AGACTAATCTTTAAACCTTG+TGG | - | chr8_1:79169407-79169426 | Msa1216980:CDS | 30.0% | |
| GACTAATCTTTAAACCTTGT+GGG | - | chr8_1:79169408-79169427 | Msa1216980:CDS | 30.0% | |
| AGACTGCTATATTATACTTG+AGG | + | chr8_1:79169540-79169559 | None:intergenic | 30.0% | |
| !!! | GGTGGTATACTTTTTCTTTA+GGG | + | chr8_1:79169602-79169621 | None:intergenic | 30.0% |
| !!! | TGGTGGTATACTTTTTCTTT+AGG | + | chr8_1:79169603-79169622 | None:intergenic | 30.0% |
| TTTCGACAAATACAATCACA+CGG | - | chr8_1:79169890-79169909 | Msa1216980:CDS | 30.0% | |
| ! | ATATGCCACTTATTGAATCA+GGG | - | chr8_1:79169932-79169951 | Msa1216980:CDS | 30.0% |
| TTGATGCAAATTATGGTATC+AGG | - | chr8_1:79170023-79170042 | Msa1216980:intron | 30.0% | |
| ! | GTTTGTGTTATTAATACCTG+TGG | + | chr8_1:79170061-79170080 | None:intergenic | 30.0% |
| ATTGTTATGAATGTAGGTTG+TGG | - | chr8_1:79170090-79170109 | Msa1216980:intron | 30.0% | |
| AAATAGGCAAAATGCCAAAA+TGG | - | chr8_1:79170291-79170310 | Msa1216980:intron | 30.0% | |
| TGTGGTTCAAATGTTTATGT+TGG | + | chr8_1:79170399-79170418 | None:intergenic | 30.0% | |
| TCGAAAAATCATGACAATTG+TGG | + | chr8_1:79170417-79170436 | None:intergenic | 30.0% | |
| TGAAGATGATATTCAATTGG+TGG | - | chr8_1:79170455-79170474 | Msa1216980:CDS | 30.0% | |
| !! | TGAAGAAAACTGGTTGATTT+TGG | - | chr8_1:79170495-79170514 | Msa1216980:CDS | 30.0% |
| !! | GAAGAAAACTGGTTGATTTT+GGG | - | chr8_1:79170496-79170515 | Msa1216980:CDS | 30.0% |
| !! | AAGAAAACTGGTTGATTTTG+GGG | - | chr8_1:79170497-79170516 | Msa1216980:CDS | 30.0% |
| ! | ACATCAATTAGTTTGAACCA+AGG | - | chr8_1:79170647-79170666 | Msa1216980:CDS | 30.0% |
| ! | CATCAATTAGTTTGAACCAA+GGG | - | chr8_1:79170648-79170667 | Msa1216980:CDS | 30.0% |
| TACAAAAGATAGCTTCTACA+TGG | + | chr8_1:79170728-79170747 | None:intergenic | 30.0% | |
| GCTAATTTGATCATGATATC+AGG | - | chr8_1:79171109-79171128 | Msa1216980:intron | 30.0% | |
| ! | TATGTACCACATTTTTCTTG+AGG | + | chr8_1:79171271-79171290 | None:intergenic | 30.0% |
| !! | CATATTTATATAATGGGTGG+AGG | - | chr8_1:79171287-79171306 | Msa1216980:intron | 30.0% |
| !! | AGGTAGATGAAGCATTTTTA+GGG | + | chr8_1:79171343-79171362 | None:intergenic | 30.0% |
| ATTGAAGAATTTGTATGACC+TGG | + | chr8_1:79171466-79171485 | None:intergenic | 30.0% | |
| ! | AGCATATGACTTTAGTTTCA+AGG | - | chr8_1:79171515-79171534 | Msa1216980:intron | 30.0% |
| TCAAAGAATTGTTCAGTGAT+GGG | + | chr8_1:79171886-79171905 | None:intergenic | 30.0% | |
| ATCAAAGAATTGTTCAGTGA+TGG | + | chr8_1:79171887-79171906 | None:intergenic | 30.0% | |
| ! | AGTATCACGAGATATTTTCA+AGG | + | chr8_1:79171959-79171978 | None:intergenic | 30.0% |
| TGAAAATATCTCGTGATACT+TGG | - | chr8_1:79171959-79171978 | Msa1216980:intron | 30.0% | |
| TTTACGTGAATCATGTTTGT+TGG | - | chr8_1:79172082-79172101 | Msa1216980:intron | 30.0% | |
| AGTAAACCCAATAATCACAA+AGG | - | chr8_1:79172199-79172218 | Msa1216980:intron | 30.0% | |
| AAACCATATGGAATATCTGA+TGG | - | chr8_1:79172277-79172296 | Msa1216980:intron | 30.0% | |
| !! | TAGGCCATTAAATAATGGAT+TGG | + | chr8_1:79172305-79172324 | None:intergenic | 30.0% |
| !!! | CCTTTTTCAAGATTGAACTT+GGG | + | chr8_1:79172334-79172353 | None:intergenic | 30.0% |
| !!! | ACCTTTTTCAAGATTGAACT+TGG | + | chr8_1:79172335-79172354 | None:intergenic | 30.0% |
| AAGTTCAATCTTGAAAAAGG+TGG | - | chr8_1:79172334-79172353 | Msa1216980:intron | 30.0% | |
| ! | AGGTAGTTGTTTGTACTTTT+AGG | - | chr8_1:79172431-79172450 | Msa1216980:intron | 30.0% |
| GTAAGTTACTTCTTTGTAGT+AGG | + | chr8_1:79172926-79172945 | None:intergenic | 30.0% | |
| !!! | AAAACCTGTTGTTTTTGACA+TGG | - | chr8_1:79172975-79172994 | Msa1216980:intron | 30.0% |
| TGACACTCCAAATTGAAAAA+AGG | - | chr8_1:79173136-79173155 | Msa1216980:intron | 30.0% | |
| TTTGTAGCTTCACAAAATCA+TGG | + | chr8_1:79173254-79173273 | None:intergenic | 30.0% | |
| ! | ATCGTGAATCACTATGATTT+TGG | + | chr8_1:79173289-79173308 | None:intergenic | 30.0% |
| ATATAATTCCGTGCATGTTT+GGG | + | chr8_1:79173335-79173354 | None:intergenic | 30.0% | |
| AATATAATTCCGTGCATGTT+TGG | + | chr8_1:79173336-79173355 | None:intergenic | 30.0% | |
| AGATGCAAATAATTCAACAG+AGG | + | chr8_1:79173404-79173423 | None:intergenic | 30.0% | |
| !!! | TACCTTGTAACTTTGGTTTT+AGG | - | chr8_1:79173474-79173493 | Msa1216980:intron | 30.0% |
| TTATGACATACTTCACATGA+TGG | - | chr8_1:79173549-79173568 | Msa1216980:intron | 30.0% | |
| TATGACATACTTCACATGAT+GGG | - | chr8_1:79173550-79173569 | Msa1216980:intron | 30.0% | |
| AATCAGAGAGATCCAATATT+CGG | - | chr8_1:79173616-79173635 | Msa1216980:intron | 30.0% | |
| TATGTTAAAACCATTCCTCA+TGG | - | chr8_1:79173658-79173677 | Msa1216980:intron | 30.0% | |
| ATGTTAAAACCATTCCTCAT+GGG | - | chr8_1:79173659-79173678 | Msa1216980:intron | 30.0% | |
| TACTAAACAATACTAAGGCA+TGG | + | chr8_1:79173773-79173792 | None:intergenic | 30.0% | |
| AGTTACAAATAAAGACTCTG+CGG | + | chr8_1:79173881-79173900 | None:intergenic | 30.0% | |
| TTTGCTTGAAAAAACTCCAT+GGG | - | chr8_1:79174038-79174057 | Msa1216980:intron | 30.0% | |
| TATTGCAAACAATGAAACCA+GGG | - | chr8_1:79174198-79174217 | Msa1216980:intron | 30.0% | |
| GTTGGTTAGTACAGTAATAT+TGG | + | chr8_1:79174225-79174244 | None:intergenic | 30.0% | |
| ! | TGAAAACTTTCATCCGTTTT+TGG | + | chr8_1:79174644-79174663 | None:intergenic | 30.0% |
| CAAGTGCAAAAATAGAAACA+CGG | - | chr8_1:79174803-79174822 | Msa1216980:intron | 30.0% | |
| !! | AATTCTGCATATTGGTTTGA+AGG | + | chr8_1:79174923-79174942 | None:intergenic | 30.0% |
| ACATGTTGAATTCTGCATAT+TGG | + | chr8_1:79174931-79174950 | None:intergenic | 30.0% | |
| !! | TGTTATTGGTTTGCTTCAAA+CGG | + | chr8_1:79175126-79175145 | None:intergenic | 30.0% |
| GGATAGAAACTTATACCATA+TGG | + | chr8_1:79175156-79175175 | None:intergenic | 30.0% | |
| AGTCAGAATATTAAGCAATG+TGG | - | chr8_1:79175442-79175461 | Msa1216980:intron | 30.0% | |
| AAAGCCTCATAGAATTGTTG+TGG | - | chr8_1:79166136-79166155 | Msa1216980:three_prime_UTR | 35.0% | |
| GTATCCACAACAATTCTATG+AGG | + | chr8_1:79166143-79166162 | None:intergenic | 35.0% | |
| CACTTCACAATTTCAATTGG+AGG | - | chr8_1:79166214-79166233 | Msa1216980:CDS | 35.0% | |
| CAGAAGAGAAAAAGAAAGGA+TGG | + | chr8_1:79166315-79166334 | None:intergenic | 35.0% | |
| ! | GGATTTTATAGAAAGGACCA+TGG | - | chr8_1:79166698-79166717 | Msa1216980:CDS | 35.0% |
| ! | AGATCTTTGGATCTTTTCCA+TGG | + | chr8_1:79166718-79166737 | None:intergenic | 35.0% |
| !! | TGCAATTTTGTTTAGGGGTA+TGG | - | chr8_1:79167261-79167280 | Msa1216980:intron | 35.0% |
| ATTAAACACACGTGGTATGT+GGG | + | chr8_1:79167576-79167595 | None:intergenic | 35.0% | |
| TATTAAACACACGTGGTATG+TGG | + | chr8_1:79167577-79167596 | None:intergenic | 35.0% | |
| CCGTAAGAACATTGATATAG+AGG | + | chr8_1:79167695-79167714 | None:intergenic | 35.0% | |
| ! | GATGATATTGCTGTTGGAAT+TGG | - | chr8_1:79167876-79167895 | Msa1216980:intron | 35.0% |
| GTAGATATCCACCAACATTT+GGG | + | chr8_1:79167938-79167957 | None:intergenic | 35.0% | |
| !!! | GCCCCCACTTTTTATTTTTA+TGG | - | chr8_1:79168028-79168047 | Msa1216980:intron | 35.0% |
| AACATGTGTCTTAGGAGTTA+GGG | + | chr8_1:79168504-79168523 | None:intergenic | 35.0% | |
| TAACATGTGTCTTAGGAGTT+AGG | + | chr8_1:79168505-79168524 | None:intergenic | 35.0% | |
| AACTCCTAAGACACATGTTA+AGG | - | chr8_1:79168505-79168524 | Msa1216980:intron | 35.0% | |
| GAATCCTTAACATGTGTCTT+AGG | + | chr8_1:79168512-79168531 | None:intergenic | 35.0% | |
| !!! | TTTTTTATCAAGTAGCCTGG+TGG | - | chr8_1:79168628-79168647 | Msa1216980:intron | 35.0% |
| AAGGTGAATTTATAACCACC+AGG | + | chr8_1:79168646-79168665 | None:intergenic | 35.0% | |
| ! | GATGAATAAGTAAAGTGTCC+GGG | - | chr8_1:79168669-79168688 | Msa1216980:intron | 35.0% |
| ! | ATGAATAAGTAAAGTGTCCG+GGG | - | chr8_1:79168670-79168689 | Msa1216980:intron | 35.0% |
| ACAGGGACTAAAAATGATGA+TGG | - | chr8_1:79169016-79169035 | Msa1216980:intron | 35.0% | |
| ATAGGGACTAAAAATGCTGA+TGG | - | chr8_1:79169048-79169067 | Msa1216980:CDS | 35.0% | |
| TAAACCTTGTGGGATCTAAA+TGG | - | chr8_1:79169418-79169437 | Msa1216980:CDS | 35.0% | |
| TCTTGTGTGTCACAACAATT+TGG | + | chr8_1:79169514-79169533 | None:intergenic | 35.0% | |
| !! | ACTTTTTCTTTAGGGAATGG+AGG | + | chr8_1:79169594-79169613 | None:intergenic | 35.0% |
| ! | GATATGCCACTTATTGAATC+AGG | - | chr8_1:79169931-79169950 | Msa1216980:CDS | 35.0% |
| TCATTCCCTGATTCAATAAG+TGG | + | chr8_1:79169940-79169959 | None:intergenic | 35.0% | |
| AATCAGGGAATGACAACAAT+AGG | - | chr8_1:79169947-79169966 | Msa1216980:CDS | 35.0% | |
| GAATAGGCAAAATGCCAAAA+TGG | - | chr8_1:79170261-79170280 | Msa1216980:intron | 35.0% | |
| !! | AGAAAACTGGTTGATTTTGG+GGG | - | chr8_1:79170498-79170517 | Msa1216980:CDS | 35.0% |
| TAATCAGTCAAGAACTTTGG+AGG | - | chr8_1:79170618-79170637 | Msa1216980:CDS | 35.0% | |
| ! | CAATAAACTCTTTTGACCCT+TGG | + | chr8_1:79170667-79170686 | None:intergenic | 35.0% |
| TAAGCATGTGTTTGCTTTCA+TGG | + | chr8_1:79170784-79170803 | None:intergenic | 35.0% | |
| GATCATGATATCAGGGAAAA+AGG | - | chr8_1:79171117-79171136 | Msa1216980:intron | 35.0% | |
| ! | TGAGGTGTGGATTATTCATT+AGG | + | chr8_1:79171253-79171272 | None:intergenic | 35.0% |
| !! | CAGGTAGATGAAGCATTTTT+AGG | + | chr8_1:79171344-79171363 | None:intergenic | 35.0% |
| ATTGTGTTTGATGCATCAAG+AGG | + | chr8_1:79171862-79171881 | None:intergenic | 35.0% | |
| CAAAGAATTGTTCAGTGATG+GGG | + | chr8_1:79171885-79171904 | None:intergenic | 35.0% | |
| GTTCGACAACGAATTCTATT+CGG | - | chr8_1:79171981-79172000 | Msa1216980:intron | 35.0% | |
| GGCTCCAATCCATTATTTAA+TGG | - | chr8_1:79172298-79172317 | Msa1216980:intron | 35.0% | |
| ! | GATTGAACTTGGGAACTTTT+AGG | + | chr8_1:79172324-79172343 | None:intergenic | 35.0% |
| CCCAAGTTCAATCTTGAAAA+AGG | - | chr8_1:79172331-79172350 | Msa1216980:intron | 35.0% | |
| CTTGTTGAATATGACCACTA+TGG | + | chr8_1:79172363-79172382 | None:intergenic | 35.0% | |
| CATAGTGGTCATATTCAACA+AGG | - | chr8_1:79172361-79172380 | Msa1216980:intron | 35.0% | |
| ! | GCAACTTGTGTTTTATAGGA+TGG | - | chr8_1:79172630-79172649 | Msa1216980:intron | 35.0% |
| ATAGGATGGTTACACAAAAG+AGG | - | chr8_1:79172644-79172663 | Msa1216980:intron | 35.0% | |
| ATGTCCATGTCAAAAACAAC+AGG | + | chr8_1:79172982-79173001 | None:intergenic | 35.0% | |
| TTAAGGTCGATTACTTGAAC+AGG | + | chr8_1:79173048-79173067 | None:intergenic | 35.0% | |
| TGTTCAAGTAATCGACCTTA+AGG | - | chr8_1:79173047-79173066 | Msa1216980:intron | 35.0% | |
| TACATGTTTGCATGAGTGAA+GGG | - | chr8_1:79173206-79173225 | Msa1216980:intron | 35.0% | |
| GTGAAGGGATTGAAAAATCA+TGG | - | chr8_1:79173221-79173240 | Msa1216980:intron | 35.0% | |
| ! | TTTGGGTTACCTTGTAACTT+TGG | - | chr8_1:79173467-79173486 | Msa1216980:intron | 35.0% |
| TGCCTAAAACCAAAGTTACA+AGG | + | chr8_1:79173479-79173498 | None:intergenic | 35.0% | |
| !! | CTACTAAAAAGCACCTTCTT+GGG | + | chr8_1:79173744-79173763 | None:intergenic | 35.0% |
| !! | ACTACTAAAAAGCACCTTCT+TGG | + | chr8_1:79173745-79173764 | None:intergenic | 35.0% |
| !!! | GGAGTTTTTTCAAGCAAACA+TGG | + | chr8_1:79174036-79174055 | None:intergenic | 35.0% |
| GTTTGCTTGAAAAAACTCCA+TGG | - | chr8_1:79174037-79174056 | Msa1216980:intron | 35.0% | |
| !!! | TTTTGCTGTTAACAAACCCA+TGG | + | chr8_1:79174057-79174076 | None:intergenic | 35.0% |
| GTATTGCAAACAATGAAACC+AGG | - | chr8_1:79174197-79174216 | Msa1216980:intron | 35.0% | |
| GTTACCATCTATCTGAGTAT+AGG | - | chr8_1:79174329-79174348 | Msa1216980:intron | 35.0% | |
| CAAACCTATACTCAGATAGA+TGG | + | chr8_1:79174336-79174355 | None:intergenic | 35.0% | |
| !! | GTGATTTTAGGGACCAAAAA+CGG | - | chr8_1:79174628-79174647 | Msa1216980:intron | 35.0% |
| TCGTAGGAACTAAACTTGAT+AGG | - | chr8_1:79174705-79174724 | Msa1216980:intron | 35.0% | |
| TAGGAACTAAACTTGATAGG+AGG | - | chr8_1:79174708-79174727 | Msa1216980:intron | 35.0% | |
| ! | AATGCAGGAAGTTTTTGTAG+TGG | - | chr8_1:79174847-79174866 | Msa1216980:intron | 35.0% |
| ! | ATGCAGGAAGTTTTTGTAGT+GGG | - | chr8_1:79174848-79174867 | Msa1216980:intron | 35.0% |
| ! | TTCTGATTCCAACACTGTTT+TGG | + | chr8_1:79174972-79174991 | None:intergenic | 35.0% |
| TAGTTGCAAATGAACTCACT+TGG | + | chr8_1:79175030-79175049 | None:intergenic | 35.0% | |
| TTATCAGTAATGCTAACGAG+AGG | + | chr8_1:79175223-79175242 | None:intergenic | 35.0% | |
| !! | TACACTGTTTCTATGTTTGC+AGG | - | chr8_1:79175265-79175284 | Msa1216980:intron | 35.0% |
| AAGTCTGAATCCGAAATTTG+AGG | - | chr8_1:79175340-79175359 | Msa1216980:intron | 35.0% | |
| ATCCACTGATGGAAAAATAG+TGG | - | chr8_1:79175397-79175416 | Msa1216980:intron | 35.0% | |
| !! | TACCACTATTTTTCCATCAG+TGG | + | chr8_1:79175402-79175421 | None:intergenic | 35.0% |
| ATAGTGGTAGATGAGAAACA+TGG | - | chr8_1:79175413-79175432 | Msa1216980:intron | 35.0% | |
| CAGAATATTAAGCAATGTGG+AGG | - | chr8_1:79175445-79175464 | Msa1216980:intron | 35.0% | |
| ATTAAGCAATGTGGAGGAAA+AGG | - | chr8_1:79175451-79175470 | Msa1216980:intron | 35.0% | |
| AATATGTACGCAAACAAGCT+TGG | - | chr8_1:79175482-79175501 | Msa1216980:intron | 35.0% | |
| GAAAAAGTTGCTGAAATCCA+AGG | - | chr8_1:79175590-79175609 | Msa1216980:CDS | 35.0% | |
| TTGATAAAAACCAAGCCATG+TGG | + | chr8_1:79175638-79175657 | None:intergenic | 35.0% | |
| TTTCTTTCTTTCTGGGTCTG+AGG | - | chr8_1:79166036-79166055 | Msa1216980:three_prime_UTR | 40.0% | |
| TGTAGCTTAGCTAGATTTGC+AGG | + | chr8_1:79166281-79166300 | None:intergenic | 40.0% | |
| TCTGAACACATGTGGTATGT+GGG | + | chr8_1:79167666-79167685 | None:intergenic | 40.0% | |
| GGTTTAAGTCTGAACACATG+TGG | + | chr8_1:79167674-79167693 | None:intergenic | 40.0% | |
| ATGGTCACTGCCTGATATTA+AGG | + | chr8_1:79167783-79167802 | None:intergenic | 40.0% | |
| ! | GATATTGCTGTTGGAATTGG+TGG | - | chr8_1:79167879-79167898 | Msa1216980:intron | 40.0% |
| GGTAGATATCCACCAACATT+TGG | + | chr8_1:79167939-79167958 | None:intergenic | 40.0% | |
| TACCAACAGAGCCAAAATCA+CGG | - | chr8_1:79168721-79168740 | Msa1216980:intron | 40.0% | |
| ACATGTGCTCATGTGTTCTA+AGG | - | chr8_1:79168765-79168784 | Msa1216980:CDS | 40.0% | |
| TCATCCATTTAGATCCCACA+AGG | + | chr8_1:79169425-79169444 | None:intergenic | 40.0% | |
| !! | CAGTGCTTTCTAGTTGCATT+TGG | - | chr8_1:79169752-79169771 | Msa1216980:intron | 40.0% |
| GACTCTTGTTAGTGCATGTT+TGG | - | chr8_1:79169858-79169877 | Msa1216980:CDS | 40.0% | |
| ! | GTGTTATTAATACCTGTGGG+AGG | + | chr8_1:79170057-79170076 | None:intergenic | 40.0% |
| CATCATCATACCCTAACGTT+TGG | - | chr8_1:79170331-79170350 | Msa1216980:intron | 40.0% | |
| TTTGGGGGAAGATGATTGAA+CGG | - | chr8_1:79170513-79170532 | Msa1216980:CDS | 40.0% | |
| ! | AGTCAAGAACTTTGGAGGTT+TGG | - | chr8_1:79170623-79170642 | Msa1216980:CDS | 40.0% |
| AGATAGCTTCTACATGGATG+TGG | + | chr8_1:79170722-79170741 | None:intergenic | 40.0% | |
| !! | CTGATTGAAAAAGTGTCTGC+AGG | - | chr8_1:79171179-79171198 | Msa1216980:intron | 40.0% |
| TCCACACCTCAAGAAAAATG+TGG | - | chr8_1:79171262-79171281 | Msa1216980:intron | 40.0% | |
| ! | ACCACATTTTTCTTGAGGTG+TGG | + | chr8_1:79171266-79171285 | None:intergenic | 40.0% |
| !! | ATATAATGGGTGGAGGTGTA+AGG | - | chr8_1:79171294-79171313 | Msa1216980:intron | 40.0% |
| !!! | TTTTTAGGGCAACAACCAGT+TGG | + | chr8_1:79171329-79171348 | None:intergenic | 40.0% |
| TGATGCATCAAGAGGAACTA+GGG | + | chr8_1:79171854-79171873 | None:intergenic | 40.0% | |
| TTGATGCATCAAGAGGAACT+AGG | + | chr8_1:79171855-79171874 | None:intergenic | 40.0% | |
| ! | ATGTGGGACTCTTTTATGAC+TGG | - | chr8_1:79172157-79172176 | Msa1216980:intron | 40.0% |
| GAGCCATCAGATATTCCATA+TGG | + | chr8_1:79172283-79172302 | None:intergenic | 40.0% | |
| GAATGGCAAAGGAAAATGTC+AGG | - | chr8_1:79172411-79172430 | Msa1216980:intron | 40.0% | |
| !!! | CAGTTGCTAATTTTGGCTAC+TGG | - | chr8_1:79172553-79172572 | Msa1216980:intron | 40.0% |
| GATGGTTACACAAAAGAGGT+AGG | - | chr8_1:79172648-79172667 | Msa1216980:intron | 40.0% | |
| ! | CTTGAACAGGCACTTTAAGA+AGG | + | chr8_1:79173035-79173054 | None:intergenic | 40.0% |
| GTACATGTTTGCATGAGTGA+AGG | - | chr8_1:79173205-79173224 | Msa1216980:intron | 40.0% | |
| GTAGCTTCACAAAATCATGG+TGG | + | chr8_1:79173251-79173270 | None:intergenic | 40.0% | |
| GAAGCTACAAAGTGTAGCTT+TGG | - | chr8_1:79173263-79173282 | Msa1216980:intron | 40.0% | |
| ! | GATGATATACCAGTTGGTCT+AGG | - | chr8_1:79173577-79173596 | Msa1216980:intron | 40.0% |
| AAAACCATTCCTCATGGGAA+TGG | - | chr8_1:79173664-79173683 | Msa1216980:intron | 40.0% | |
| ! | ATCGATTCCGACACTCTTTA+TGG | - | chr8_1:79173694-79173713 | Msa1216980:intron | 40.0% |
| ! | AGCAAGACCATAAAGAGTGT+CGG | + | chr8_1:79173704-79173723 | None:intergenic | 40.0% |
| AACATGGTGTTTGAATCCTC+TGG | + | chr8_1:79174020-79174039 | None:intergenic | 40.0% | |
| GGAGAAAACTCTGTGAAGTT+TGG | - | chr8_1:79174110-79174129 | Msa1216980:intron | 40.0% | |
| CTAGTGGTTGTCTAAGTTCA+GGG | + | chr8_1:79174157-79174176 | None:intergenic | 40.0% | |
| ACTTAGACAACCACTAGCTA+TGG | - | chr8_1:79174160-79174179 | Msa1216980:intron | 40.0% | |
| AACCACTAGCTATGGAAGTT+TGG | - | chr8_1:79174168-79174187 | Msa1216980:intron | 40.0% | |
| ACCACTAGCTATGGAAGTTT+GGG | - | chr8_1:79174169-79174188 | Msa1216980:intron | 40.0% | |
| AGTACAGTAATATTGGACCC+TGG | + | chr8_1:79174218-79174237 | None:intergenic | 40.0% | |
| ACGTTTGCCAAGTTAGTCAA+GGG | + | chr8_1:79174251-79174270 | None:intergenic | 40.0% | |
| AACGTTTGCCAAGTTAGTCA+AGG | + | chr8_1:79174252-79174271 | None:intergenic | 40.0% | |
| AGAACATTATGCAACCCACT+CGG | - | chr8_1:79174373-79174392 | Msa1216980:intron | 40.0% | |
| ! | TGCAGGAAGTTTTTGTAGTG+GGG | - | chr8_1:79174849-79174868 | Msa1216980:intron | 40.0% |
| AGCAGTAATGCAGAAGACAA+AGG | - | chr8_1:79174881-79174900 | Msa1216980:intron | 40.0% | |
| !! | TGATTCCAACACTGTTTTGG+CGG | + | chr8_1:79174969-79174988 | None:intergenic | 40.0% |
| TAGGCTTGACAATAGACTCT+TGG | + | chr8_1:79175101-79175120 | None:intergenic | 40.0% | |
| !! | TGGTTTGCTTCAAACGGTTT+AGG | + | chr8_1:79175120-79175139 | None:intergenic | 40.0% |
| ACTTTCCTGGGTGAAATTCT+AGG | - | chr8_1:79175290-79175309 | Msa1216980:intron | 40.0% | |
| AATTCTAGGTGCAGTAGTCT+TGG | - | chr8_1:79175304-79175323 | Msa1216980:intron | 40.0% | |
| CCACTAGCTAAGACTTTAAC+GGG | + | chr8_1:79175371-79175390 | None:intergenic | 40.0% | |
| GCCACTAGCTAAGACTTTAA+CGG | + | chr8_1:79175372-79175391 | None:intergenic | 40.0% | |
| TTCTTCAAAGCTTCCTACCT+TGG | + | chr8_1:79175525-79175544 | None:intergenic | 40.0% | |
| TTGAAGAACAGACGAGGAAT+TGG | - | chr8_1:79175537-79175556 | Msa1216980:intron | 40.0% | |
| !! | TTTTTAGGCTTACCATCGTG+AGG | + | chr8_1:79175569-79175588 | None:intergenic | 40.0% |
| CTGAAATCCAAGGTTAAGAG+TGG | - | chr8_1:79175600-79175619 | Msa1216980:CDS | 40.0% | |
| ATAAAAACCAAGCCATGTGG+TGG | + | chr8_1:79175635-79175654 | None:intergenic | 40.0% | |
| AGGAACTGTGGTTTCTGTAG+TGG | - | chr8_1:79166109-79166128 | Msa1216980:three_prime_UTR | 45.0% | |
| AACTGTGGTTTCTGTAGTGG+AGG | - | chr8_1:79166112-79166131 | Msa1216980:three_prime_UTR | 45.0% | |
| ! | ACTGTGGTTTCTGTAGTGGA+GGG | - | chr8_1:79166113-79166132 | Msa1216980:three_prime_UTR | 45.0% |
| GTGCAGACACTATATAGCGA+CGG | + | chr8_1:79166980-79166999 | None:intergenic | 45.0% | |
| GTCTGAACACATGTGGTATG+TGG | + | chr8_1:79167667-79167686 | None:intergenic | 45.0% | |
| TGACCATCAGTGCAAATAGC+TGG | - | chr8_1:79167796-79167815 | Msa1216980:intron | 45.0% | |
| AGTCCAGCTATTTGCACTGA+TGG | + | chr8_1:79167802-79167821 | None:intergenic | 45.0% | |
| !! | CAAATAGCTGGACTAGTGCT+GGG | - | chr8_1:79167808-79167827 | Msa1216980:intron | 45.0% |
| GGGAGAGATGATATTGCTGT+TGG | - | chr8_1:79167870-79167889 | Msa1216980:intron | 45.0% | |
| GAGGGTGGAATACTGTCAAA+TGG | - | chr8_1:79167903-79167922 | Msa1216980:intron | 45.0% | |
| GGTACCATTCTCCCAAATGT+TGG | - | chr8_1:79167924-79167943 | Msa1216980:intron | 45.0% | |
| ACCATTCTCCCAAATGTTGG+TGG | - | chr8_1:79167927-79167946 | Msa1216980:intron | 45.0% | |
| TCCACCAACATTTGGGAGAA+TGG | + | chr8_1:79167931-79167950 | None:intergenic | 45.0% | |
| AAATAAAAAGTGGGGGCGGT+GGG | + | chr8_1:79168025-79168044 | None:intergenic | 45.0% | |
| AAAATAAAAAGTGGGGGCGG+TGG | + | chr8_1:79168026-79168045 | None:intergenic | 45.0% | |
| GTAAAACATTGCGCAGGAAC+CGG | + | chr8_1:79168704-79168723 | None:intergenic | 45.0% | |
| ! | CTGTTGGTAAAACATTGCGC+AGG | + | chr8_1:79168710-79168729 | None:intergenic | 45.0% |
| TAATGGTTGAGCGGAACACA+TGG | + | chr8_1:79169238-79169257 | None:intergenic | 45.0% | |
| TCGTAGAAATGGGGAGCAAA+TGG | + | chr8_1:79169272-79169291 | None:intergenic | 45.0% | |
| CAGGGAATGACAACAATAGG+AGG | - | chr8_1:79169950-79169969 | Msa1216980:CDS | 45.0% | |
| AACATGGGGTCCAAACGTTA+GGG | + | chr8_1:79170344-79170363 | None:intergenic | 45.0% | |
| TTGCTCATAGGACCAACATG+GGG | + | chr8_1:79170358-79170377 | None:intergenic | 45.0% | |
| GTTGCTCATAGGACCAACAT+GGG | + | chr8_1:79170359-79170378 | None:intergenic | 45.0% | |
| GTCGAGAAATGGTTGCTCAT+AGG | + | chr8_1:79170370-79170389 | None:intergenic | 45.0% | |
| GTAAGGTCAAGCAATCCAAC+TGG | - | chr8_1:79171311-79171330 | Msa1216980:intron | 45.0% | |
| ! | AGATCCTTTTGCAGCTTACC+AGG | - | chr8_1:79171445-79171464 | Msa1216980:intron | 45.0% |
| ATGACCTGGTAAGCTGCAAA+AGG | + | chr8_1:79171452-79171471 | None:intergenic | 45.0% | |
| ! | GGACTCTTTTATGACTGGTG+TGG | - | chr8_1:79172162-79172181 | Msa1216980:intron | 45.0% |
| GAAAAAGGTGGTGTCCATAG+TGG | - | chr8_1:79172346-79172365 | Msa1216980:intron | 45.0% | |
| GGTTACACAAAAGAGGTAGG+TGG | - | chr8_1:79172651-79172670 | Msa1216980:intron | 45.0% | |
| ACAAGTACCCTTACTGAGTC+TGG | + | chr8_1:79172678-79172697 | None:intergenic | 45.0% | |
| CAAAGCCTAACCGAGATGTT+GGG | - | chr8_1:79172709-79172728 | Msa1216980:intron | 45.0% | |
| CAAGTGAACTCCCAACATCT+CGG | + | chr8_1:79172722-79172741 | None:intergenic | 45.0% | |
| ATGTTGGGAGTTCACTTGAC+AGG | - | chr8_1:79172724-79172743 | Msa1216980:intron | 45.0% | |
| TGTTGGGAGTTCACTTGACA+GGG | - | chr8_1:79172725-79172744 | Msa1216980:intron | 45.0% | |
| TAAAGCAACCACGACAAGCA+GGG | - | chr8_1:79172875-79172894 | Msa1216980:intron | 45.0% | |
| TTTGACATGGACATGAGTGC+AGG | - | chr8_1:79172988-79173007 | Msa1216980:intron | 45.0% | |
| AGTGTTCTCCCAAACATGCA+CGG | - | chr8_1:79173324-79173343 | Msa1216980:intron | 45.0% | |
| GCAATCATTGTGAGTCCTAC+TGG | - | chr8_1:79173496-79173515 | Msa1216980:intron | 45.0% | |
| TCATTGTGAGTCCTACTGGA+TGG | - | chr8_1:79173500-79173519 | Msa1216980:intron | 45.0% | |
| CATTGTGAGTCCTACTGGAT+GGG | - | chr8_1:79173501-79173520 | Msa1216980:intron | 45.0% | |
| GGTCGTGATGATATACCAGT+TGG | - | chr8_1:79173571-79173590 | Msa1216980:intron | 45.0% | |
| AAAACGTCTCCTAGACCAAC+TGG | + | chr8_1:79173589-79173608 | None:intergenic | 45.0% | |
| GATCCAATATTCGGAGCTGT+TGG | - | chr8_1:79173625-79173644 | Msa1216980:intron | 45.0% | |
| ATGTAACCTCCATTCCCATG+AGG | + | chr8_1:79173676-79173695 | None:intergenic | 45.0% | |
| TCTAGACCTAAACATCCCCA+CGG | - | chr8_1:79173836-79173855 | Msa1216980:CDS | 45.0% | |
| GCTAGTGGTTGTCTAAGTTC+AGG | + | chr8_1:79174158-79174177 | None:intergenic | 45.0% | |
| TCCCAAACTTCCATAGCTAG+TGG | + | chr8_1:79174173-79174192 | None:intergenic | 45.0% | |
| GAACATTATGCAACCCACTC+GGG | - | chr8_1:79174374-79174393 | Msa1216980:intron | 45.0% | |
| ! | ATTGGAGTGTTCTCCTCTCA+AGG | - | chr8_1:79174423-79174442 | Msa1216980:intron | 45.0% |
| TCAAACTAGCCCACCGAAAT+TGG | + | chr8_1:79174465-79174484 | None:intergenic | 45.0% | |
| ! | GCAGGAAGTTTTTGTAGTGG+GGG | - | chr8_1:79174850-79174869 | Msa1216980:intron | 45.0% |
| !! | CAGGAAGTTTTTGTAGTGGG+GGG | - | chr8_1:79174851-79174870 | Msa1216980:intron | 45.0% |
| !!! | ACACTGTTTTGGCGGCTAAA+GGG | + | chr8_1:79174961-79174980 | None:intergenic | 45.0% |
| !!! | AACACTGTTTTGGCGGCTAA+AGG | + | chr8_1:79174962-79174981 | None:intergenic | 45.0% |
| TTTAGCCGCCAAAACAGTGT+TGG | - | chr8_1:79174961-79174980 | Msa1216980:intron | 45.0% | |
| AGGGACAAGAAAAACACCAG+AGG | - | chr8_1:79175066-79175085 | Msa1216980:intron | 45.0% | |
| CTCTTGGTAAACACAACCTC+TGG | + | chr8_1:79175085-79175104 | None:intergenic | 45.0% | |
| ATGTTTGCAGGACACTTTCC+TGG | - | chr8_1:79175277-79175296 | Msa1216980:intron | 45.0% | |
| TGTTTGCAGGACACTTTCCT+GGG | - | chr8_1:79175278-79175297 | Msa1216980:intron | 45.0% | |
| ACGGGCTTCACCTCAAATTT+CGG | + | chr8_1:79175353-79175372 | None:intergenic | 45.0% | |
| CCCGTTAAAGTCTTAGCTAG+TGG | - | chr8_1:79175368-79175387 | Msa1216980:intron | 45.0% | |
| !! | GAAGCTTTGAAGAACAGACG+AGG | - | chr8_1:79175531-79175550 | Msa1216980:intron | 45.0% |
| AATTGGAGTCATCCTCACGA+TGG | - | chr8_1:79175554-79175573 | Msa1216980:intron | 45.0% | |
| !! | AAAATAAATATTAATATGAA+AGG | - | chr8_1:79166834-79166853 | Msa1216980:CDS | 5.0% |
| !!! | AAATTGATAAATTTTTATTT+AGG | - | chr8_1:79167051-79167070 | Msa1216980:intron | 5.0% |
| !!! | AATTGATAAATTTTTATTTA+GGG | - | chr8_1:79167052-79167071 | Msa1216980:intron | 5.0% |
| !!! | TAATTATACTATTTTTTTTT+TGG | + | chr8_1:79167363-79167382 | None:intergenic | 5.0% |
| !!! | ATATTTTTTTAAATGATTTT+TGG | - | chr8_1:79168370-79168389 | Msa1216980:intron | 5.0% |
| !!! | TATTTTTTTAAATGATTTTT+GGG | - | chr8_1:79168371-79168390 | Msa1216980:intron | 5.0% |
| !!! | ATTAATATATAAAATTTTTG+GGG | + | chr8_1:79169165-79169184 | None:intergenic | 5.0% |
| !!! | CATTAATATATAAAATTTTT+GGG | + | chr8_1:79169166-79169185 | None:intergenic | 5.0% |
| !!! | TCATTAATATATAAAATTTT+TGG | + | chr8_1:79169167-79169186 | None:intergenic | 5.0% |
| !!! | AAATTTTATATATTAATGAA+TGG | - | chr8_1:79169168-79169187 | Msa1216980:intron | 5.0% |
| !! | GCAAATAGCTGGACTAGTGC+TGG | - | chr8_1:79167807-79167826 | Msa1216980:intron | 50.0% |
| AATAAAAAGTGGGGGCGGTG+GGG | + | chr8_1:79168024-79168043 | None:intergenic | 50.0% | |
| AGTGTCCGGGGTTCAAAATC+CGG | - | chr8_1:79168682-79168701 | Msa1216980:intron | 50.0% | |
| ! | AGGAACCGGATTTTGAACCC+CGG | + | chr8_1:79168690-79168709 | None:intergenic | 50.0% |
| !!! | CACCGTGATTTTGGCTCTGT+TGG | + | chr8_1:79168726-79168745 | None:intergenic | 50.0% |
| CAATAGGAGGCTGCAGATAC+AGG | - | chr8_1:79169963-79169982 | Msa1216980:intron | 50.0% | |
| TAAGCGTCCTCCAAGTCCTA+CGG | + | chr8_1:79169999-79170018 | None:intergenic | 50.0% | |
| CAACATGGGGTCCAAACGTT+AGG | + | chr8_1:79170345-79170364 | None:intergenic | 50.0% | |
| CTAACGTTTGGACCCCATGT+TGG | - | chr8_1:79170343-79170362 | Msa1216980:CDS | 50.0% | |
| GGTTGCTCATAGGACCAACA+TGG | + | chr8_1:79170360-79170379 | None:intergenic | 50.0% | |
| !! | GTTGGTGTCGAGTCGAGAAA+TGG | + | chr8_1:79170381-79170400 | None:intergenic | 50.0% |
| TGAGCAGTTGGTTGCTCTAG+TGG | + | chr8_1:79171152-79171171 | None:intergenic | 50.0% | |
| AGAGCAACCAACTGCTCAAC+AGG | - | chr8_1:79171154-79171173 | Msa1216980:intron | 50.0% | |
| ATCAGCACCTGTTGAGCAGT+TGG | + | chr8_1:79171164-79171183 | None:intergenic | 50.0% | |
| TCAAGAGGAACTAGGGTGAC+AGG | + | chr8_1:79171847-79171866 | None:intergenic | 50.0% | |
| CAGAGATCCTCTTTGCTTCG+TGG | - | chr8_1:79172387-79172406 | Msa1216980:intron | 50.0% | |
| CCATTCTCCACGAAGCAAAG+AGG | + | chr8_1:79172397-79172416 | None:intergenic | 50.0% | |
| CCTCTTTGCTTCGTGGAGAA+TGG | - | chr8_1:79172394-79172413 | Msa1216980:intron | 50.0% | |
| TGCTTCGTGGAGAATGGCAA+AGG | - | chr8_1:79172400-79172419 | Msa1216980:intron | 50.0% | |
| TAGGTGGTCCAGACTCAGTA+AGG | - | chr8_1:79172667-79172686 | Msa1216980:intron | 50.0% | |
| AGGTGGTCCAGACTCAGTAA+GGG | - | chr8_1:79172668-79172687 | Msa1216980:intron | 50.0% | |
| GCAAAGCCTAACCGAGATGT+TGG | - | chr8_1:79172708-79172727 | Msa1216980:intron | 50.0% | |
| GAACTCCCAACATCTCGGTT+AGG | + | chr8_1:79172717-79172736 | None:intergenic | 50.0% | |
| CTAAAGCAACCACGACAAGC+AGG | - | chr8_1:79172874-79172893 | Msa1216980:intron | 50.0% | |
| TTGTATCTCCCTGCTTGTCG+TGG | + | chr8_1:79172886-79172905 | None:intergenic | 50.0% | |
| CCTCCAACAGCTCCGAATAT+TGG | + | chr8_1:79173631-79173650 | None:intergenic | 50.0% | |
| CCAATATTCGGAGCTGTTGG+AGG | - | chr8_1:79173628-79173647 | Msa1216980:intron | 50.0% | |
| ACCATTCCTCATGGGAATGG+AGG | - | chr8_1:79173667-79173686 | Msa1216980:intron | 50.0% | |
| ACCTCCATTCCCATGAGGAA+TGG | + | chr8_1:79173671-79173690 | None:intergenic | 50.0% | |
| CTCTTACAATCCCTGCTGCA+TGG | - | chr8_1:79173913-79173932 | Msa1216980:CDS | 50.0% | |
| CAAGTTAGTCAAGGGTCCGT+TGG | + | chr8_1:79174243-79174262 | None:intergenic | 50.0% | |
| CAACGGACCCTTGACTAACT+TGG | - | chr8_1:79174241-79174260 | Msa1216980:intron | 50.0% | |
| ATTATGCAACCCACTCGGGT+TGG | - | chr8_1:79174378-79174397 | Msa1216980:intron | 50.0% | |
| TAGCTCGCCGAAGCCAATTT+CGG | - | chr8_1:79174449-79174468 | Msa1216980:intron | 50.0% | |
| ! | TAGCCCACCGAAATTGGCTT+CGG | + | chr8_1:79174459-79174478 | None:intergenic | 50.0% |
| ! | TTTTGGCGGCTAAAGGGTCT+AGG | + | chr8_1:79174955-79174974 | None:intergenic | 50.0% |
| ! | ACTTGGCGCTGAGTACTCAA+TGG | + | chr8_1:79175013-79175032 | None:intergenic | 50.0% |
| CTGCACCTAGAATTTCACCC+AGG | + | chr8_1:79175298-79175317 | None:intergenic | 50.0% | |
| ! | GTGCAGTAGTCTTGGCTGAT+AGG | - | chr8_1:79175312-79175331 | Msa1216980:intron | 50.0% |
| ! | AGTGGCATCGAATCCACTGA+TGG | - | chr8_1:79175386-79175405 | Msa1216980:intron | 50.0% |
| CGATCTGTATCAGTCAGCCA+AGG | - | chr8_1:79175505-79175524 | Msa1216980:intron | 50.0% | |
| CTGTATCAGTCAGCCAAGGT+AGG | - | chr8_1:79175509-79175528 | Msa1216980:intron | 50.0% | |
| AAGCCATGTGGTGGTTGTTG+CGG | + | chr8_1:79175626-79175645 | None:intergenic | 50.0% | |
| TGGGTCTGAGGATGTTCCTG+CGG | - | chr8_1:79166048-79166067 | Msa1216980:three_prime_UTR | 55.0% | |
| TCTGAGGATGTTCCTGCGGA+GGG | - | chr8_1:79166052-79166071 | Msa1216980:three_prime_UTR | 55.0% | |
| !! | TGCTGTTGGAATTGGTGGCG+AGG | - | chr8_1:79167884-79167903 | Msa1216980:intron | 55.0% |
| !! | GCTGTTGGAATTGGTGGCGA+GGG | - | chr8_1:79167885-79167904 | Msa1216980:intron | 55.0% |
| GTATCCTCTACGCGCAACTG+CGG | - | chr8_1:79169384-79169403 | Msa1216980:CDS | 55.0% | |
| TCCTCCAAGTCCTACGGGAA+TGG | + | chr8_1:79169993-79170012 | None:intergenic | 55.0% | |
| AAGCGTCCTCCAAGTCCTAC+GGG | + | chr8_1:79169998-79170017 | None:intergenic | 55.0% | |
| CAGGAAAGCTTTCCTCCCAC+AGG | - | chr8_1:79170042-79170061 | Msa1216980:intron | 55.0% | |
| GCTGCATTTGCCCATCCAGT+AGG | + | chr8_1:79173514-79173533 | None:intergenic | 55.0% | |
| ATCTGCCACGAAGCCCAAGA+AGG | - | chr8_1:79173728-79173747 | Msa1216980:intron | 55.0% | |
| AAGCACCTTCTTGGGCTTCG+TGG | + | chr8_1:79173736-79173755 | None:intergenic | 55.0% | |
| CAACAGCCGTGGGGATGTTT+AGG | + | chr8_1:79173845-79173864 | None:intergenic | 55.0% | |
| TTGCACAGTGCAACAGCCGT+GGG | + | chr8_1:79173855-79173874 | None:intergenic | 55.0% | |
| ACGGCTGTTGCACTGTGCAA+CGG | - | chr8_1:79173855-79173874 | Msa1216980:CDS | 55.0% | |
| TGTCAATGCGCCATGCAGCA+GGG | + | chr8_1:79173926-79173945 | None:intergenic | 55.0% | |
| ATGTCAATGCGCCATGCAGC+AGG | + | chr8_1:79173927-79173946 | None:intergenic | 55.0% | |
| ! | CTGTGAAGTTTGGAGCCCCA+CGG | - | chr8_1:79174120-79174139 | Msa1216980:intron | 55.0% |
| ! | TGTGAAGTTTGGAGCCCCAC+GGG | - | chr8_1:79174121-79174140 | Msa1216980:intron | 55.0% |
| !! | GTGGTGTTGGCTTGGGACAT+TGG | - | chr8_1:79174405-79174424 | Msa1216980:intron | 55.0% |
| TCGCCGAAGCCAATTTCGGT+GGG | - | chr8_1:79174453-79174472 | Msa1216980:intron | 55.0% | |
| GTTGCGGCCACTCTTAACCT+TGG | + | chr8_1:79175610-79175629 | None:intergenic | 55.0% | |
| GCAACAACCACCACATGGCT+TGG | - | chr8_1:79175625-79175644 | Msa1216980:CDS | 55.0% | |
| GTCTGAGGATGTTCCTGCGG+AGG | - | chr8_1:79166051-79166070 | Msa1216980:three_prime_UTR | 60.0% | |
| !! | GTTGGAATTGGTGGCGAGGG+TGG | - | chr8_1:79167888-79167907 | Msa1216980:intron | 60.0% |
| AGGAGGCTGCAGATACAGGC+AGG | - | chr8_1:79169967-79169986 | Msa1216980:intron | 60.0% | |
| TACAGGCAGGCCATTCCCGT+AGG | - | chr8_1:79169980-79169999 | Msa1216980:intron | 60.0% | |
| CAGGCCATTCCCGTAGGACT+TGG | - | chr8_1:79169986-79170005 | Msa1216980:intron | 60.0% | |
| GCCATTCCCGTAGGACTTGG+AGG | - | chr8_1:79169989-79170008 | Msa1216980:intron | 60.0% | |
| ACCTGTGTGCCTCGACAGTG+TGG | - | chr8_1:79171359-79171378 | Msa1216980:intron | 60.0% | |
| ACCACACTGTCGAGGCACAC+AGG | + | chr8_1:79171363-79171382 | None:intergenic | 60.0% | |
| CCATGGTCACCACACTGTCG+AGG | + | chr8_1:79171371-79171390 | None:intergenic | 60.0% | |
| CCTCGACAGTGTGGTGACCA+TGG | - | chr8_1:79171368-79171387 | Msa1216980:intron | 60.0% | |
| TGCACAGTGCAACAGCCGTG+GGG | + | chr8_1:79173854-79173873 | None:intergenic | 60.0% | |
| GTTGCACAGTGCAACAGCCG+TGG | + | chr8_1:79173856-79173875 | None:intergenic | 60.0% | |
| GCACAGTGCAGTCACTCCAG+AGG | - | chr8_1:79174001-79174020 | Msa1216980:intron | 60.0% | |
| ! | GTTTGGAGCCCCACGGGATA+CGG | - | chr8_1:79174127-79174146 | Msa1216980:intron | 60.0% |
| AGGGTGATCCGTATCCCGTG+GGG | + | chr8_1:79174138-79174157 | None:intergenic | 60.0% | |
| CAGGGTGATCCGTATCCCGT+GGG | + | chr8_1:79174139-79174158 | None:intergenic | 60.0% | |
| TCAGGGTGATCCGTATCCCG+TGG | + | chr8_1:79174140-79174159 | None:intergenic | 60.0% | |
| !! | TTGGCCTGGTGGTGTTGGCT+TGG | - | chr8_1:79174397-79174416 | Msa1216980:intron | 60.0% |
| !! | TGGCCTGGTGGTGTTGGCTT+GGG | - | chr8_1:79174398-79174417 | Msa1216980:intron | 60.0% |
| TGTCCCAAGCCAACACCACC+AGG | + | chr8_1:79174404-79174423 | None:intergenic | 60.0% | |
| CTCGCCGAAGCCAATTTCGG+TGG | - | chr8_1:79174452-79174471 | Msa1216980:intron | 60.0% | |
| TGGCCGCAACAACCACCACA+TGG | - | chr8_1:79175620-79175639 | Msa1216980:CDS | 60.0% | |
| GTCTCCGCAGTTGCGCGTAG+AGG | + | chr8_1:79169391-79169410 | None:intergenic | 65.0% | |
| ACCACCAGGCCAACCCGAGT+GGG | + | chr8_1:79174390-79174409 | None:intergenic | 65.0% | |
| !! | TCGGGTTGGCCTGGTGGTGT+TGG | - | chr8_1:79174392-79174411 | Msa1216980:intron | 65.0% |
| CGGCGAGCTACGACCTTGAG+AGG | + | chr8_1:79174439-79174458 | None:intergenic | 65.0% | |
| CAGCTGCAGCTACCCTCCGC+AGG | + | chr8_1:79166067-79166086 | None:intergenic | 70.0% | |
| !! | GCAACCCACTCGGGTTGGCC+TGG | - | chr8_1:79174383-79174402 | Msa1216980:intron | 70.0% |
| !! | ACCCACTCGGGTTGGCCTGG+TGG | - | chr8_1:79174386-79174405 | Msa1216980:intron | 70.0% |
| CACCACCAGGCCAACCCGAG+TGG | + | chr8_1:79174391-79174410 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 79166005 | 79175799 | 79166005 | ID=Msa1216980;Name=Msa1216980 |
| chr8_1 | mRNA | 79166005 | 79175799 | 79166005 | ID=Msa1216980-mRNA-1;Parent=Msa1216980;Name=Msa1216980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=54|1|1|1|1|1|12|183|892 |
| chr8_1 | exon | 79166005 | 79166517 | 79166005 | ID=Msa1216980-mRNA-1:exon:27440;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79166645 | 79166950 | 79166645 | ID=Msa1216980-mRNA-1:exon:27439;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79167500 | 79167701 | 79167500 | ID=Msa1216980-mRNA-1:exon:27438;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79168055 | 79168308 | 79168055 | ID=Msa1216980-mRNA-1:exon:27437;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79168736 | 79168933 | 79168736 | ID=Msa1216980-mRNA-1:exon:27436;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79169034 | 79169156 | 79169034 | ID=Msa1216980-mRNA-1:exon:27435;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79169372 | 79169656 | 79169372 | ID=Msa1216980-mRNA-1:exon:27434;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79169802 | 79169978 | 79169802 | ID=Msa1216980-mRNA-1:exon:27433;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79170338 | 79170673 | 79170338 | ID=Msa1216980-mRNA-1:exon:27432;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79171741 | 79171851 | 79171741 | ID=Msa1216980-mRNA-1:exon:27431;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79173833 | 79174012 | 79173833 | ID=Msa1216980-mRNA-1:exon:27430;Parent=Msa1216980-mRNA-1 |
| chr8_1 | exon | 79175569 | 79175799 | 79175569 | ID=Msa1216980-mRNA-1:exon:27429;Parent=Msa1216980-mRNA-1 |
| chr8_1 | five_prime_UTR | 79175746 | 79175799 | 79175746 | ID=Msa1216980-mRNA-1:five_prime_utr;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79175569 | 79175745 | 79175569 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79173833 | 79174012 | 79173833 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79171741 | 79171851 | 79171741 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79170338 | 79170673 | 79170338 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79169802 | 79169978 | 79169802 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79169372 | 79169656 | 79169372 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79169034 | 79169156 | 79169034 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79168736 | 79168933 | 79168736 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79168055 | 79168308 | 79168055 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79167500 | 79167701 | 79167500 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79166645 | 79166950 | 79166645 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | CDS | 79166188 | 79166517 | 79166188 | ID=Msa1216980-mRNA-1:cds;Parent=Msa1216980-mRNA-1 |
| chr8_1 | three_prime_UTR | 79166005 | 79166187 | 79166005 | ID=Msa1216980-mRNA-1:three_prime_utr;Parent=Msa1216980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
