AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1366150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366150 MtrunA17_Chr1g0187411 98.541 754 11 0 1 754 73 826 0.0 1536
Msa1366150 MtrunA17_Chr4g0049011 31.892 370 199 13 59 401 280 623 6.63e-34 138
Msa1366150 MtrunA17_Chr1g0182151 29.673 428 226 18 18 400 4 401 1.78e-33 138
Msa1366150 MtrunA17_Chr7g0266631 31.429 385 187 15 59 400 10 360 2.46e-32 134
Msa1366150 MtrunA17_Chr2g0312631 28.976 459 237 15 67 499 408 803 3.44e-32 134
Msa1366150 MtrunA17_Chr5g0411971 28.106 491 275 17 65 533 421 855 3.45e-32 134
Msa1366150 MtrunA17_Chr1g0192481 32.602 319 178 8 124 430 125 418 9.80e-32 131
Msa1366150 MtrunA17_Chr5g0421521 28.626 524 281 21 65 553 396 861 2.46e-31 131
Msa1366150 MtrunA17_Chr1g0178411 31.169 385 188 14 59 400 14 364 5.37e-31 130
Msa1366150 MtrunA17_Chr5g0421591 28.817 524 280 22 65 553 396 861 1.39e-30 129
Msa1366150 MtrunA17_Chr4g0042061 29.942 344 207 12 83 412 463 786 5.03e-30 127
Msa1366150 MtrunA17_Chr1g0195111 29.156 391 232 12 26 399 364 726 1.03e-29 126
Msa1366150 MtrunA17_Chr2g0280421 32.110 327 179 12 99 409 483 782 2.64e-28 121
Msa1366150 MtrunA17_Chr2g0327581 30.184 381 210 11 97 448 94 447 4.16e-28 121
Msa1366150 MtrunA17_Chr7g0271961 29.396 364 205 10 95 444 444 769 4.53e-28 121
Msa1366150 MtrunA17_Chr3g0102921 31.366 322 179 12 103 406 491 788 3.89e-27 118
Msa1366150 MtrunA17_Chr7g0257301 31.803 305 162 9 124 399 459 746 6.14e-27 117
Msa1366150 MtrunA17_Chr7g0238581 25.424 413 234 12 48 424 5 379 2.84e-26 114
Msa1366150 MtrunA17_Chr7g0272871 29.855 345 185 14 76 400 148 455 5.79e-26 114
Msa1366150 MtrunA17_Chr5g0407791 28.239 301 161 10 117 400 952 1214 5.80e-26 114
Msa1366150 MtrunA17_Chr2g0319271 28.228 333 207 10 83 400 430 745 1.69e-25 112
Msa1366150 MtrunA17_Chr5g0427481 29.429 333 185 10 91 396 48 357 4.24e-25 112
Msa1366150 MtrunA17_Chr3g0132921 26.596 470 248 17 91 529 40 443 7.64e-25 109
Msa1366150 MtrunA17_Chr4g0062291 27.244 312 184 9 97 396 174 454 2.01e-24 108
Msa1366150 MtrunA17_Chr1g0153061 28.947 380 182 13 91 418 39 382 2.05e-24 109
Msa1366150 MtrunA17_Chr1g0191851 29.483 329 178 12 90 400 183 475 2.09e-24 109
Msa1366150 MtrunA17_Chr3g0134191 27.824 363 208 10 91 418 39 382 2.31e-24 109
Msa1366150 MtrunA17_Chr8g0369881 27.703 296 177 9 117 404 938 1204 3.09e-24 109
Msa1366150 MtrunA17_Chr1g0191181 28.125 352 212 9 59 396 89 413 4.15e-24 107
Msa1366150 MtrunA17_Chr5g0447041 28.313 332 180 10 119 406 496 813 8.78e-24 107
Msa1366150 MtrunA17_Chr4g0045381 27.887 459 226 19 27 430 154 562 9.02e-24 108
Msa1366150 MtrunA17_Chr2g0307481 27.245 323 186 9 88 396 109 396 2.36e-23 105
Msa1366150 MtrunA17_Chr6g0485471 28.704 324 163 9 98 399 164 441 5.04e-23 104
Msa1366150 MtrunA17_Chr8g0377731 26.988 415 226 16 20 396 15 390 5.16e-23 105
Msa1366150 MtrunA17_Chr2g0331761 27.988 343 188 10 78 399 207 511 1.13e-22 103
Msa1366150 MtrunA17_Chr2g0322291 29.293 396 202 16 56 414 86 440 1.42e-22 103
Msa1366150 MtrunA17_Chr4g0053211 26.761 355 193 11 91 400 43 375 2.74e-22 102
Msa1366150 MtrunA17_Chr5g0398521 29.221 308 175 10 106 393 113 397 4.02e-22 102
Msa1366150 MtrunA17_Chr1g0152231 27.812 320 164 10 105 397 55 334 3.46e-21 99.0
Msa1366150 MtrunA17_Chr4g0035661 26.786 448 245 16 39 462 72 460 2.13e-20 97.1
Msa1366150 MtrunA17_Chr7g0269681 39.583 144 77 3 264 399 55 196 8.97e-20 93.2
Msa1366150 MtrunA17_Chr7g0245931 27.469 324 161 11 105 393 107 391 1.07e-19 94.4
Msa1366150 MtrunA17_Chr4g0069141 27.949 390 203 15 47 396 139 490 1.41e-19 94.7
Msa1366150 MtrunA17_Chr2g0295881 27.273 385 197 12 98 440 247 590 2.07e-19 93.6
Msa1366150 MtrunA17_Chr3g0145071 28.531 354 179 13 130 462 170 470 3.34e-19 93.2
Msa1366150 MtrunA17_Chr7g0258991 27.869 305 156 10 115 396 129 392 3.33e-18 89.7
Msa1366150 MtrunA17_Chr3g0122121 27.394 376 197 16 59 396 99 436 3.45e-18 89.7
Msa1366150 MtrunA17_Chr4g0067421 27.523 327 167 10 98 396 255 539 8.94e-18 88.2
Msa1366150 MtrunA17_Chr8g0386891 34.270 178 102 4 267 431 21 196 6.26e-16 80.9
Msa1366150 MtrunA17_Chr1g0193221 28.028 289 141 13 134 393 73 323 1.51e-14 78.2
Msa1366150 MtrunA17_Chr8g0367581 25.464 377 198 14 97 458 187 495 1.21e-13 75.1
Msa1366150 MtrunA17_Chr6g0484501 33.113 151 94 3 291 436 83 231 1.28e-12 68.6
Msa1366150 MtrunA17_Chr5g0445211 22.547 479 298 17 52 494 70 511 2.10e-12 71.2
Msa1366150 MtrunA17_Chr3g0142841 26.059 307 165 13 89 374 136 401 1.79e-11 68.2
Msa1366150 MtrunA17_Chr8g0390991 33.333 138 85 3 291 428 53 183 2.69e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366150 AT4G14330.1 58.846 780 238 17 1 751 1 726 0.0 800
Msa1366150 AT4G21270.1 33.333 345 176 13 99 420 478 791 1.01e-34 142
Msa1366150 AT4G05190.1 32.394 355 203 13 59 393 429 766 5.66e-33 136
Msa1366150 AT4G05190.2 32.394 355 203 13 59 393 416 753 1.35e-32 135
Msa1366150 AT2G37420.1 28.000 500 281 20 18 477 3 463 4.48e-32 134
Msa1366150 AT2G37420.2 28.000 500 281 20 18 477 3 463 4.48e-32 134
Msa1366150 AT2G36200.1 31.169 385 188 15 59 400 13 363 3.12e-31 131
Msa1366150 AT2G36200.2 31.169 385 188 15 59 400 13 363 3.19e-31 132
Msa1366150 AT1G09170.2 29.032 434 233 15 18 422 397 784 1.46e-30 129
Msa1366150 AT1G09170.4 29.032 434 233 15 18 422 397 784 1.60e-30 129
Msa1366150 AT1G09170.3 29.197 411 218 14 18 399 397 763 1.68e-30 129
Msa1366150 AT1G09170.7 29.197 411 218 14 18 399 397 763 1.68e-30 129
Msa1366150 AT2G22610.2 26.515 528 292 15 63 539 437 919 3.44e-30 128
Msa1366150 AT1G09170.5 29.197 411 218 14 18 399 397 763 4.85e-30 128
Msa1366150 AT2G28620.1 29.108 426 238 15 59 448 51 448 7.87e-30 127
Msa1366150 AT2G28620.3 29.108 426 238 15 59 448 51 448 7.87e-30 127
Msa1366150 AT2G28620.2 29.108 426 238 15 59 448 51 448 7.87e-30 127
Msa1366150 AT2G22610.1 26.590 519 301 16 63 556 437 900 9.63e-30 127
Msa1366150 AT2G22610.3 26.590 519 301 16 63 556 438 901 1.23e-29 127
Msa1366150 AT4G27180.1 31.692 325 178 12 99 404 434 733 1.84e-29 125
Msa1366150 AT4G27180.2 31.692 325 178 12 99 404 434 733 1.84e-29 125
Msa1366150 AT3G45850.2 31.003 329 175 9 97 400 100 401 2.68e-29 125
Msa1366150 AT3G45850.1 31.003 329 175 9 97 400 100 401 2.68e-29 125
Msa1366150 AT2G47500.2 27.803 446 259 13 26 445 367 775 5.51e-29 124
Msa1366150 AT2G47500.1 27.803 446 259 13 26 445 367 775 6.12e-29 124
Msa1366150 AT5G27000.1 30.163 368 192 15 59 399 395 724 1.37e-28 123
Msa1366150 AT1G73860.1 30.704 355 199 12 95 430 551 877 4.77e-28 121
Msa1366150 AT1G72250.2 28.767 438 243 15 79 494 525 915 8.30e-28 121
Msa1366150 AT1G72250.1 28.767 438 243 15 79 494 516 906 8.77e-28 121
Msa1366150 AT1G73860.2 30.704 355 199 13 95 430 468 794 8.94e-28 120
Msa1366150 AT1G72250.4 28.767 438 243 15 79 494 536 926 1.04e-27 120
Msa1366150 AT1G72250.3 28.767 438 243 15 79 494 537 927 1.07e-27 120
Msa1366150 AT1G18410.3 29.538 325 174 11 95 399 531 820 1.73e-27 120
Msa1366150 AT1G18410.2 29.538 325 174 11 95 399 531 820 1.73e-27 120
Msa1366150 AT1G18410.4 29.538 325 174 11 95 399 674 963 1.97e-27 120
Msa1366150 AT3G44730.1 31.419 296 164 7 124 406 446 715 2.20e-27 119
Msa1366150 AT3G44730.4 31.419 296 164 7 124 406 446 715 2.20e-27 119
Msa1366150 AT3G44730.2 31.419 296 164 7 124 406 491 760 2.92e-27 119
Msa1366150 AT3G44730.3 31.419 296 164 7 124 406 491 760 2.92e-27 119
Msa1366150 AT5G60930.1 28.783 337 190 9 94 396 40 360 6.00e-27 118
Msa1366150 AT3G10310.1 32.119 302 154 9 124 406 430 699 7.81e-27 117
Msa1366150 AT5G60930.3 28.783 337 190 9 94 396 40 360 7.94e-27 118
Msa1366150 AT3G10310.2 32.119 302 154 9 124 406 430 699 8.24e-27 117
Msa1366150 AT5G60930.2 28.783 337 190 9 94 396 40 360 8.64e-27 118
Msa1366150 AT3G54870.3 27.830 424 234 12 115 506 165 548 1.05e-26 117
Msa1366150 AT3G54870.1 27.830 424 234 12 115 506 165 548 1.06e-26 117
Msa1366150 AT1G18410.5 29.577 355 191 12 95 431 521 834 1.25e-26 117
Msa1366150 AT3G54870.2 27.830 424 234 12 115 506 165 548 1.39e-26 117
Msa1366150 AT5G54670.1 31.546 317 181 13 99 400 443 738 1.51e-26 116
Msa1366150 AT5G54670.2 31.546 317 181 13 99 400 443 738 1.51e-26 116
Msa1366150 AT5G54670.3 31.546 317 181 13 99 400 383 678 1.59e-26 116
Msa1366150 AT1G18410.1 30.650 323 165 12 95 399 674 955 3.27e-26 115
Msa1366150 AT1G09170.6 29.570 372 190 13 18 360 397 725 1.43e-25 113
Msa1366150 AT1G09170.8 29.570 372 190 13 18 360 397 725 1.43e-25 113
Msa1366150 AT1G63640.5 28.954 411 227 15 26 406 425 800 1.47e-25 114
Msa1366150 AT1G63640.1 28.954 411 227 15 26 406 435 810 1.49e-25 114
Msa1366150 AT1G63640.4 28.954 411 227 15 26 406 435 810 1.49e-25 114
Msa1366150 AT1G63640.3 28.954 411 227 15 26 406 435 810 1.52e-25 114
Msa1366150 AT5G27550.2 27.520 367 201 11 90 440 168 485 2.87e-25 112
Msa1366150 AT5G27550.1 27.520 367 201 11 90 440 168 485 2.87e-25 112
Msa1366150 AT5G65930.2 27.974 311 173 11 113 406 945 1221 3.05e-25 113
Msa1366150 AT5G65930.1 27.974 311 173 11 113 406 944 1220 3.21e-25 112
Msa1366150 AT5G65930.3 27.974 311 173 11 113 406 951 1227 3.45e-25 112
Msa1366150 AT3G16060.1 29.851 335 175 10 98 415 218 509 5.05e-25 111
Msa1366150 AT1G55550.1 26.420 405 246 12 81 465 111 483 2.42e-24 109
Msa1366150 AT1G63640.2 28.230 418 214 14 26 406 435 803 2.99e-24 109
Msa1366150 AT5G47820.2 27.720 386 214 14 91 436 42 402 3.92e-24 109
Msa1366150 AT5G47820.1 27.720 386 214 14 91 436 42 402 3.92e-24 109
Msa1366150 AT1G18550.1 27.974 311 182 9 97 396 202 481 4.26e-24 108
Msa1366150 AT5G02370.1 27.483 302 180 7 99 396 74 340 4.98e-24 107
Msa1366150 AT5G41310.1 27.723 404 221 12 59 438 423 779 2.03e-23 107
Msa1366150 AT1G12430.1 29.530 298 172 8 115 393 131 409 3.20e-23 106
Msa1366150 AT1G12430.2 29.530 298 172 8 115 393 131 409 3.20e-23 106
Msa1366150 AT5G27950.1 27.108 332 199 10 86 396 95 404 3.85e-23 105
Msa1366150 AT3G50240.2 28.490 351 188 11 91 400 56 384 4.10e-22 102
Msa1366150 AT3G50240.4 28.490 351 188 11 91 400 56 384 4.25e-22 102
Msa1366150 AT3G50240.1 28.490 351 188 11 91 400 56 384 4.38e-22 102
Msa1366150 AT3G17360.3 27.206 408 201 17 34 396 149 505 9.85e-22 102
Msa1366150 AT3G17360.2 27.206 408 201 17 34 396 149 505 1.01e-21 102
Msa1366150 AT3G17360.1 27.206 408 201 17 34 396 149 505 1.05e-21 102
Msa1366150 AT3G49650.1 28.873 284 152 7 130 396 95 345 1.06e-21 101
Msa1366150 AT3G44050.1 29.262 393 206 16 56 414 91 445 1.28e-21 101
Msa1366150 AT3G63480.2 28.448 348 174 13 97 412 52 356 2.20e-21 98.6
Msa1366150 AT3G63480.1 28.775 351 173 12 97 412 52 360 6.72e-21 97.1
Msa1366150 AT1G01950.1 26.119 402 213 15 36 393 38 399 1.03e-20 98.2
Msa1366150 AT1G01950.2 26.119 402 213 15 36 393 38 399 1.08e-20 98.2
Msa1366150 AT1G01950.3 26.119 402 213 15 36 393 38 399 1.17e-20 97.8
Msa1366150 AT3G19050.1 28.398 412 208 17 46 414 178 545 1.19e-20 98.6
Msa1366150 AT1G59540.1 26.558 369 210 12 116 462 60 389 2.96e-20 96.7
Msa1366150 AT3G16630.2 28.045 353 179 12 78 396 215 526 8.59e-20 95.1
Msa1366150 AT3G16630.1 28.045 353 179 12 78 396 215 526 8.59e-20 95.1
Msa1366150 AT2G21380.2 29.373 303 158 10 110 396 159 421 1.90e-19 94.4
Msa1366150 AT2G21380.1 29.373 303 158 10 110 396 159 421 1.90e-19 94.4
Msa1366150 AT5G06670.2 28.620 297 146 10 124 396 131 385 3.50e-19 93.2
Msa1366150 AT5G06670.3 28.620 297 146 10 124 396 131 385 3.50e-19 93.2
Msa1366150 AT5G06670.5 28.620 297 146 10 124 396 131 385 4.26e-19 92.8
Msa1366150 AT5G06670.8 28.197 305 153 10 116 396 123 385 4.82e-19 92.4
Msa1366150 AT5G06670.4 28.197 305 153 10 116 396 123 385 4.82e-19 92.4
Msa1366150 AT5G06670.7 28.197 305 153 10 116 396 123 385 4.82e-19 92.4
Msa1366150 AT3G12020.4 31.000 300 135 13 124 396 134 388 6.80e-19 92.4
Msa1366150 AT3G12020.1 31.000 300 135 13 124 396 134 388 6.80e-19 92.4
Msa1366150 AT1G01950.4 28.522 291 142 10 136 393 1 258 7.02e-19 92.0
Msa1366150 AT4G39050.1 28.904 301 156 11 113 396 156 415 1.34e-18 91.7
Msa1366150 AT3G12020.3 30.333 300 137 12 124 396 134 388 1.57e-18 91.3
Msa1366150 AT3G12020.2 30.333 300 137 12 124 396 134 388 1.57e-18 91.3
Msa1366150 AT1G09170.1 36.806 144 81 3 264 399 586 727 3.58e-18 90.1
Msa1366150 AT5G06670.6 30.070 286 136 12 134 396 150 394 1.56e-17 88.2
Msa1366150 AT5G06670.1 30.070 286 136 12 134 396 150 394 1.56e-17 88.2
Msa1366150 AT4G14150.1 26.748 329 182 11 99 396 126 426 2.92e-17 87.4
Msa1366150 AT1G21730.1 28.477 302 158 11 115 396 131 394 3.67e-17 86.7
Msa1366150 AT3G23670.1 24.403 377 204 11 59 396 97 431 1.68e-16 84.7
Msa1366150 AT3G23670.2 24.403 377 204 11 59 396 97 431 2.45e-16 84.0
Msa1366150 AT3G50240.3 28.904 301 151 11 141 400 4 282 1.03e-15 82.0
Msa1366150 AT5G27950.2 26.538 260 157 7 149 396 1 238 1.20e-15 80.9
Msa1366150 AT2G21300.2 27.915 283 147 10 130 394 101 344 8.43e-15 79.0
Msa1366150 AT2G21300.4 27.915 283 147 10 130 394 101 344 8.43e-15 79.0
Msa1366150 AT2G21300.3 27.915 283 147 10 130 394 101 344 8.43e-15 79.0
Msa1366150 AT2G21300.1 27.915 283 147 10 130 394 101 344 8.43e-15 79.0
Msa1366150 AT2G21300.5 27.915 283 147 10 130 394 101 344 8.43e-15 79.0
Msa1366150 AT1G59540.2 25.893 336 188 12 149 462 1 297 1.11e-14 78.6
Msa1366150 AT5G10470.1 26.899 316 175 11 97 397 183 457 1.81e-14 78.2
Msa1366150 AT5G10470.2 26.899 316 175 11 97 397 183 457 2.04e-14 78.2
Msa1366150 AT4G24170.1 25.442 283 155 9 130 394 80 324 4.81e-13 73.6
Msa1366150 AT4G24170.2 25.442 283 155 9 130 394 80 324 4.81e-13 73.6
Msa1366150 AT5G65460.3 24.768 323 180 12 97 397 179 460 6.89e-13 73.2

Find 198 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCTTTGTTGTTGAAAT+TGG 0.116300 tig0018446:-30379 None:intergenic
TGCTTCAAAATTCACATTAA+TGG 0.168349 tig0018446:+30224 Msa1366150:exon
AAGGATTAATGGTGTGAAAT+TGG 0.190481 tig0018446:+30608 Msa1366150:CDS
GTTCTAACTCTAGATCTATT+AGG 0.195325 tig0018446:+30487 Msa1366150:CDS
ATTAGGGTTAAGGCTGATTT+TGG 0.209720 tig0018446:+30504 Msa1366150:CDS
ACAAGAGTTGGAAAAGAAAT+TGG 0.209936 tig0018446:+32572 Msa1366150:CDS
GAAGAAAGATTGAATCTTTA+GGG 0.218402 tig0018446:-30183 None:intergenic
CTTCAATCTCTTCTCTCAAC+TGG 0.238301 tig0018446:+30147 Msa1366150:five_prime_UTR
GGAGGTGGTGGTGGAGGTGG+AGG 0.251870 tig0018446:+30879 Msa1366150:CDS
GGAAGAAAGATTGAATCTTT+AGG 0.252673 tig0018446:-30184 None:intergenic
GGTGGTGGAGGTGGAGGGTT+TGG 0.257552 tig0018446:+30885 Msa1366150:CDS
TCGCTTTGGCTCCATATTCT+AGG 0.260142 tig0018446:-32281 None:intergenic
GGGTTCGTTCGTTTACCTTT+AGG 0.261875 tig0018446:-32539 None:intergenic
GGAGGTGGAGGGTTTGGATT+TGG 0.275827 tig0018446:+30891 Msa1366150:CDS
ACAATCTCTACCCTAGAATA+TGG 0.305778 tig0018446:+32270 Msa1366150:CDS
AATGGTTAAATCGATGGATT+TGG 0.306512 tig0018446:+32833 Msa1366150:CDS
AACTTGGAAGCATACGTTAT+TGG 0.309181 tig0018446:+33359 Msa1366150:CDS
AAGAATGCAACCTATATATC+TGG 0.311451 tig0018446:+31578 Msa1366150:CDS
GTGAATTCTCAGCATCCTAT+TGG 0.311812 tig0018446:-33180 None:intergenic
CTTGCTTGTAAAACAGATAA+AGG 0.314448 tig0018446:-30465 None:intergenic
AGGATTAATGGTGTGAAATT+GGG 0.314756 tig0018446:+30609 Msa1366150:CDS
TGCTTCCAAGTTCTCCTTGT+TGG 0.317551 tig0018446:-33348 None:intergenic
AGGGATTGGTGTTCCATATT+GGG 0.326230 tig0018446:-33240 None:intergenic
ATTGTCTTGTGGATCTCTTT+AGG 0.326561 tig0018446:-32252 None:intergenic
GTAAGTTTGCTGTCTCTAAA+AGG 0.328198 tig0018446:-32052 None:intergenic
CAAAGGGAGCTCTCCCAATA+TGG 0.331740 tig0018446:+33227 Msa1366150:CDS
ACTGGAAGTGATGGGGAAAA+AGG 0.333442 tig0018446:+31553 Msa1366150:CDS
TTAATCTCCTCCTCACTTGC+AGG 0.333781 tig0018446:-32516 None:intergenic
GAATCTTTGTTGTTGAAATT+GGG 0.334497 tig0018446:-30378 None:intergenic
ATTCTCGCAATAACTTCAAT+TGG 0.339440 tig0018446:-30414 None:intergenic
TTCTAACTCTAGATCTATTA+GGG 0.347769 tig0018446:+30488 Msa1366150:CDS
TTTGGTGATGGGTGTGGATG+TGG 0.353870 tig0018446:-30354 None:intergenic
TTTGTGGAATCAAGGATTAA+TGG 0.354980 tig0018446:+30597 Msa1366150:CDS
ATTGAACAAGCTGGTCAAAC+TGG 0.355976 tig0018446:+31849 Msa1366150:CDS
AAGAGGGTATTTACTCAGTA+TGG 0.360775 tig0018446:-33607 None:intergenic
TGCTTCATTTCCAGATATAT+AGG 0.362177 tig0018446:-31588 None:intergenic
ATTTAACTTGTAGGTCAAAC+TGG 0.362307 tig0018446:+31535 Msa1366150:intron
GCAGGCGGGGATTGTGTATA+GGG 0.362748 tig0018446:+30704 Msa1366150:CDS
GAAGAGTCTTCCTCCTTAAC+CGG 0.362939 tig0018446:-32330 None:intergenic
TAGGGATTGGTGTTCCATAT+TGG 0.364220 tig0018446:-33241 None:intergenic
CCGAAGATAGAGGATTATTC+TGG 0.365897 tig0018446:+33134 Msa1366150:CDS
GGTAAGAGTCATACGATGTT+TGG 0.372659 tig0018446:+30672 Msa1366150:CDS
ATAACTTCAATTGGGTGTTC+AGG 0.383722 tig0018446:-30405 None:intergenic
TACAAAAGCACGGATGATCT+TGG 0.385204 tig0018446:+32810 Msa1366150:CDS
AGGGCTTTGAGGGATATTCT+TGG 0.387276 tig0018446:+30723 Msa1366150:CDS
TTTCCAACTCTTGTCTCAGC+TGG 0.387829 tig0018446:-32563 None:intergenic
TTGTGGATCTCTTTAGGATC+AGG 0.388675 tig0018446:-32246 None:intergenic
ACAAGAAATTTGTGGAATCA+AGG 0.392206 tig0018446:+30589 Msa1366150:CDS
ATGAAATAGTAGTATTTCAT+AGG 0.394073 tig0018446:-33475 None:intergenic
AGTGGAGAAAGAGGTGATAG+AGG 0.394089 tig0018446:+33079 Msa1366150:CDS
GGGTGTGGATGTGGTGGTGT+AGG 0.397359 tig0018446:-30345 None:intergenic
TCCACCACCACCTCCATTAG+TGG 0.398128 tig0018446:-30871 None:intergenic
CTCTAGATCTATTAGGGTTA+AGG 0.400943 tig0018446:+30494 Msa1366150:CDS
TCCACTAATGGAGGTGGTGG+TGG 0.407208 tig0018446:+30870 Msa1366150:CDS
GTATTTGGACAGGGTTGGTT+TGG 0.407900 tig0018446:-32918 None:intergenic
TGAAAACGAGTCAAAAGAAA+TGG 0.408896 tig0018446:+32752 Msa1366150:CDS
AGTGGAAGAAGATGAGGAAG+TGG 0.412522 tig0018446:+33061 Msa1366150:CDS
ACTAATGGAGGTGGTGGTGG+AGG 0.414276 tig0018446:+30873 Msa1366150:CDS
TTGTTGTTGAAATTGGGATT+TGG 0.414314 tig0018446:-30372 None:intergenic
TGTTTCTGAGGAAGAGGAAC+TGG 0.414383 tig0018446:+30557 Msa1366150:CDS
TTGGGATTTGGTGATGGGTG+TGG 0.417125 tig0018446:-30360 None:intergenic
TTGAAATTGGGATTTGGTGA+TGG 0.418140 tig0018446:-30366 None:intergenic
CAACTCTTGTCTCAGCTGGC+GGG 0.419220 tig0018446:-32559 None:intergenic
ATGTATGGACCGACTGGTTC+TGG 0.420486 tig0018446:+30651 Msa1366150:CDS
ACGAACTATACATTTCGCTT+TGG 0.425631 tig0018446:-32295 None:intergenic
AATGGAGGTGGTGGTGGAGG+TGG 0.425905 tig0018446:+30876 Msa1366150:CDS
AAATGTACTATTATGATGTA+TGG 0.428051 tig0018446:+30636 Msa1366150:CDS
TGCTGTGCTAAGAGCTAAAG+TGG 0.429631 tig0018446:+32485 Msa1366150:CDS
GAGTTATCAAATGCGTTGAA+TGG 0.429834 tig0018446:-30278 None:intergenic
AGCAGGCGGGGATTGTGTAT+AGG 0.429994 tig0018446:+30703 Msa1366150:CDS
TGGTCCTCATACCCCGGTTA+AGG 0.430902 tig0018446:+32317 Msa1366150:CDS
AGATGAGGAAGTGGAGAAAG+AGG 0.433971 tig0018446:+33070 Msa1366150:CDS
CGCTTTGGCTCCATATTCTA+GGG 0.438148 tig0018446:-32280 None:intergenic
AGTGATGGTGATTCTTCTAA+AGG 0.439182 tig0018446:+30771 Msa1366150:CDS
AGAGGTGATAGAGGAAAAGA+GGG 0.443722 tig0018446:+33088 Msa1366150:CDS
TCTTCAGCGCTATATTTCCT+TGG 0.445828 tig0018446:-31991 None:intergenic
AAGAGGTGATAGAGGAAAAG+AGG 0.445864 tig0018446:+33087 Msa1366150:CDS
GGAGCTGACAAGGAAAATAA+TGG 0.446418 tig0018446:+33155 Msa1366150:CDS
AGTGTCCAACAAGGAGAACT+TGG 0.452092 tig0018446:+33343 Msa1366150:CDS
GTGGAGGGTTTGGATTTGGT+TGG 0.454092 tig0018446:+30895 Msa1366150:CDS
CATATTGGGAGAGCTCCCTT+TGG 0.459595 tig0018446:-33226 None:intergenic
GTGATGGTGATTCTTCTAAA+GGG 0.459995 tig0018446:+30772 Msa1366150:CDS
CTCAAAAGAAATTCAGAAAG+TGG 0.460854 tig0018446:+31619 Msa1366150:CDS
CCAGAATAATCCTCTATCTT+CGG 0.462382 tig0018446:-33134 None:intergenic
AAGCATCGTCTCAATTTCAA+TGG 0.463001 tig0018446:+30309 Msa1366150:CDS
AGGAAAATAATGGTTCCAAT+AGG 0.463360 tig0018446:+33165 Msa1366150:CDS
TTGAGGGATATTCTTGGAGA+TGG 0.464538 tig0018446:+30729 Msa1366150:CDS
TTCTTCTCACTTGATTTCAC+AGG 0.465509 tig0018446:-33305 None:intergenic
CTCCAGCTCAACAAACTCAT+TGG 0.466125 tig0018446:-32613 None:intergenic
GATTGTGTATAGGGCTTTGA+GGG 0.466134 tig0018446:+30713 Msa1366150:CDS
TGAAATTGGGATTTGGTGAT+GGG 0.466283 tig0018446:-30365 None:intergenic
TAACAAAAGTCCGAAGATAG+AGG 0.467142 tig0018446:+33124 Msa1366150:CDS
TGAGGGATATTCTTGGAGAT+GGG 0.467584 tig0018446:+30730 Msa1366150:CDS
GTTTATCATGAAGTTACAAA+TGG 0.468535 tig0018446:+32395 Msa1366150:CDS
CTTGCGCGCGAAGTTATTGT+CGG 0.468571 tig0018446:+32879 Msa1366150:CDS
CAAAAGAAATGGAGCCGAAT+GGG 0.472089 tig0018446:+32763 Msa1366150:CDS
TATATATCTGGAAATGAAGC+AGG 0.472214 tig0018446:+31590 Msa1366150:CDS
GGATTAATGGTGTGAAATTG+GGG 0.476005 tig0018446:+30610 Msa1366150:CDS
GACCAATGAGTTTGTTGAGC+TGG 0.477397 tig0018446:+32611 Msa1366150:CDS
TGAGCTGGAGAGGAAGAGAA+TGG 0.480271 tig0018446:+32626 Msa1366150:CDS
AAAGCTGTACAATATGTGAT+TGG 0.483239 tig0018446:+33418 Msa1366150:three_prime_UTR
GGATGTGGTGGTGTAGGTGC+TGG 0.486779 tig0018446:-30339 None:intergenic
TCCTCCTTAACCGGGGTATG+AGG 0.489867 tig0018446:-32321 None:intergenic
TATGTTTGTGCACCAAACTT+TGG 0.490049 tig0018446:+32969 Msa1366150:CDS
TGCGAGAATTCGTGACTACC+CGG 0.490085 tig0018446:+30428 Msa1366150:CDS
TACTCTCTGTGGAAACCAAA+GGG 0.492142 tig0018446:+33211 Msa1366150:CDS
CCAACTCTTGTCTCAGCTGG+CGG 0.493659 tig0018446:-32560 None:intergenic
AGAAAGGATATTGCAGCAGC+AGG 0.494111 tig0018446:+32650 Msa1366150:CDS
TGAAATTCTGAGGAAGAGAC+TGG 0.495469 tig0018446:+32680 Msa1366150:CDS
GAAGTTATTGTCGGCATGCA+AGG 0.497297 tig0018446:+32888 Msa1366150:CDS
AGCTGGTCAAACTGGATTTG+AGG 0.498372 tig0018446:+31857 Msa1366150:CDS
CTTGGAAGAGGAAGAAGGTG+TGG 0.498494 tig0018446:-30250 None:intergenic
AAAGCACTCTTTGTAATGAC+AGG 0.500609 tig0018446:+31660 Msa1366150:CDS
AGGTAAATGATCACATTTCA+AGG 0.500630 tig0018446:-33455 None:intergenic
AGAGGAAGAGAATGGAAGAA+AGG 0.502616 tig0018446:+32634 Msa1366150:CDS
TGTGAAATCAAGTGAGAAGA+AGG 0.502711 tig0018446:+33307 Msa1366150:CDS
TTAGCCGTCCTCCCACTGTT+GGG 0.505464 tig0018446:-31797 None:intergenic
AGGAGAAGAAGAAGCAGAGC+AGG 0.509255 tig0018446:+33028 Msa1366150:CDS
GGATTGTGTATAGGGCTTTG+AGG 0.509476 tig0018446:+30712 Msa1366150:CDS
CTTGTTCTACAAGAAATTTG+TGG 0.509556 tig0018446:+30581 Msa1366150:CDS
TTTGGATGTTCGAAGCAGGC+GGG 0.512838 tig0018446:+30690 Msa1366150:CDS
GGTGATGGGTGTGGATGTGG+TGG 0.513114 tig0018446:-30351 None:intergenic
TTCTCGCAATAACTTCAATT+GGG 0.514101 tig0018446:-30413 None:intergenic
ATTAGCCGTCCTCCCACTGT+TGG 0.517267 tig0018446:-31798 None:intergenic
GAGGTGGTGGTGGAGGTGGA+GGG 0.518438 tig0018446:+30880 Msa1366150:CDS
TTCTTCAAAGCATGAGCGTA+AGG 0.520449 tig0018446:+32728 Msa1366150:CDS
TCAAAGTATTTGGACAGGGT+TGG 0.520555 tig0018446:-32923 None:intergenic
TAGGTCAAACTGGAAGTGAT+GGG 0.521601 tig0018446:+31545 Msa1366150:intron
TGAATGGATTTGCTTGGAAG+AGG 0.523605 tig0018446:-30262 None:intergenic
GATGTTTGGATGTTCGAAGC+AGG 0.524123 tig0018446:+30686 Msa1366150:CDS
ATGCGTTGAATGGATTTGCT+TGG 0.524842 tig0018446:-30268 None:intergenic
TCTTGGAATGGTTAAATCGA+TGG 0.527069 tig0018446:+32827 Msa1366150:CDS
ACGGCTAATGCTTGTGGACA+TGG 0.527289 tig0018446:+31812 Msa1366150:CDS
TCAGAAAATATTGAACAAGC+TGG 0.529266 tig0018446:+31840 Msa1366150:CDS
GGTGTCTGTTTCTGAGGAAG+AGG 0.533081 tig0018446:+30551 Msa1366150:CDS
ATAACTTCGCGCGCAAGGAA+TGG 0.533798 tig0018446:-32873 None:intergenic
ATTTGCTTGGAAGAGGAAGA+AGG 0.534731 tig0018446:-30255 None:intergenic
TGATGGGGTGTCTGTTTCTG+AGG 0.536317 tig0018446:+30545 Msa1366150:CDS
TTCAATTGGGTGTTCAGGAG+GGG 0.536985 tig0018446:-30400 None:intergenic
TTGTCCACTAATGGAGGTGG+TGG 0.539176 tig0018446:+30867 Msa1366150:CDS
GTCTAAGAACAATGCTTCAA+AGG 0.539766 tig0018446:+30917 Msa1366150:CDS
TGAGGAGGAGATTAACCTAA+AGG 0.539837 tig0018446:+32524 Msa1366150:CDS
CTAATGCTTGTGGACATGGC+AGG 0.542042 tig0018446:+31816 Msa1366150:CDS
CTTCAATTGGGTGTTCAGGA+GGG 0.542953 tig0018446:-30401 None:intergenic
GTAGGTCAAACTGGAAGTGA+TGG 0.543168 tig0018446:+31544 Msa1366150:intron
TTCAGAAAGTGGAGAAGCGA+AGG 0.543184 tig0018446:+31630 Msa1366150:CDS
ATGAGTTTGTTGAGCTGGAG+AGG 0.543613 tig0018446:+32616 Msa1366150:CDS
AAGAGTCTTCCTCCTTAACC+GGG 0.545497 tig0018446:-32329 None:intergenic
TGATAAAGTGGAAGAAGATG+AGG 0.546943 tig0018446:+33055 Msa1366150:CDS
CCGCCAGCTGAGACAAGAGT+TGG 0.548364 tig0018446:+32560 Msa1366150:CDS
CAAACTTACCATGCTTCTGC+AGG 0.553017 tig0018446:+32066 Msa1366150:CDS
ACTTCAATTGGGTGTTCAGG+AGG 0.559031 tig0018446:-30402 None:intergenic
GAGGGATATTCTTGGAGATG+GGG 0.559140 tig0018446:+30731 Msa1366150:CDS
AGGATCAAGAATTGCTGCAA+TGG 0.559733 tig0018446:+32368 Msa1366150:CDS
AAAGCGAAATGTATAGTTCG+TGG 0.559976 tig0018446:+32297 Msa1366150:CDS
CGACAATAACTTCGCGCGCA+AGG 0.566431 tig0018446:-32878 None:intergenic
AATTCTTGATCCTAAAATGA+CGG 0.569423 tig0018446:-32358 None:intergenic
TTCAATCTCTTCTCTCAACT+GGG 0.570469 tig0018446:+30148 Msa1366150:five_prime_UTR
TTACTCTCTGTGGAAACCAA+AGG 0.570732 tig0018446:+33210 Msa1366150:CDS
GGATTATTCTGGAGCTGACA+AGG 0.572145 tig0018446:+33145 Msa1366150:CDS
GTGGTTGAGTCCATTGCAAA+TGG 0.573506 tig0018446:+32016 Msa1366150:CDS
CACAACATATTTACTCTCTG+TGG 0.574191 tig0018446:+33200 Msa1366150:CDS
GGGAGGACGGCTAATGCTTG+TGG 0.576293 tig0018446:+31806 Msa1366150:CDS
TCAAAAGAAATGGAGCCGAA+TGG 0.576334 tig0018446:+32762 Msa1366150:CDS
AGGAGGAAGTTGAAATTCTG+AGG 0.579813 tig0018446:+32670 Msa1366150:CDS
ATTATGATGTATGGACCGAC+TGG 0.580492 tig0018446:+30645 Msa1366150:CDS
AGTACAGTATATGAAGATGA+AGG 0.580728 tig0018446:+33008 Msa1366150:CDS
GTTTGGATGTTCGAAGCAGG+CGG 0.582763 tig0018446:+30689 Msa1366150:CDS
ATGTGAATCACCATTTGCAA+TGG 0.583556 tig0018446:-32026 None:intergenic
AGAGCAGGATCATGATAAAG+TGG 0.584752 tig0018446:+33043 Msa1366150:CDS
GTTGATTACCTGCAGAAGCA+TGG 0.585396 tig0018446:-32074 None:intergenic
ACAGATTCTGAAGGTAGTGA+TGG 0.588168 tig0018446:+30756 Msa1366150:CDS
TCCTCATACCCCGGTTAAGG+AGG 0.589007 tig0018446:+32320 Msa1366150:CDS
GGTATTTACTCAGTATGGAA+TGG 0.591619 tig0018446:-33602 None:intergenic
GGAAACAGCTCCTGCAAGTG+AGG 0.597967 tig0018446:+32506 Msa1366150:CDS
AGTTCGTGGTCCTCATACCC+CGG 0.605308 tig0018446:+32311 Msa1366150:CDS
ATGTCCCAACAGTGGGAGGA+CGG 0.607165 tig0018446:+31793 Msa1366150:CDS
TAAATCGATGGATTTGGACA+TGG 0.607220 tig0018446:+32839 Msa1366150:CDS
CTAGGGTAGAGATTGTCTTG+TGG 0.610211 tig0018446:-32263 None:intergenic
AACAGCTCCTGCAAGTGAGG+AGG 0.610821 tig0018446:+32509 Msa1366150:CDS
TTGAGACGATGCTTTGAACG+TGG 0.613136 tig0018446:-30300 None:intergenic
GCTTAGTGTTTACAAAAGCA+CGG 0.616489 tig0018446:+32800 Msa1366150:CDS
AAATATAGCGCTGAAGAGAG+TGG 0.617437 tig0018446:+31997 Msa1366150:CDS
AAGGATATTGCAGCAGCAGG+AGG 0.618726 tig0018446:+32653 Msa1366150:CDS
GCTGTACAATATGTGATTGG+AGG 0.620047 tig0018446:+33421 Msa1366150:three_prime_UTR
CTCGATGTCCCAACAGTGGG+AGG 0.638434 tig0018446:+31789 Msa1366150:CDS
ATACTCGATGTCCCAACAGT+GGG 0.638772 tig0018446:+31786 Msa1366150:CDS
ATATATCTGGAAATGAAGCA+GGG 0.639127 tig0018446:+31591 Msa1366150:CDS
TTGGAAGAGGAAGAAGGTGT+GGG 0.648163 tig0018446:-30249 None:intergenic
GATGGGGATACAGATTCTGA+AGG 0.652121 tig0018446:+30747 Msa1366150:CDS
GATACTCGATGTCCCAACAG+TGG 0.654849 tig0018446:+31785 Msa1366150:CDS
AAGCACGGATGATCTTGGAA+TGG 0.661001 tig0018446:+32815 Msa1366150:CDS
GAGTTCTAGAAGTCACTGCA+TGG 0.664378 tig0018446:+31682 Msa1366150:CDS
TTGGATGTTCGAAGCAGGCG+GGG 0.667487 tig0018446:+30691 Msa1366150:CDS
GATTAATGGTGTGAAATTGG+GGG 0.689277 tig0018446:+30611 Msa1366150:CDS
AGGTCAAACTGGAAGTGATG+GGG 0.696764 tig0018446:+31546 Msa1366150:intron
AGAGTCTTCCTCCTTAACCG+GGG 0.728596 tig0018446:-32328 None:intergenic
TGACTCTTACCAGAACCAGT+CGG 0.741916 tig0018446:-30660 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAACTAATTATTATTTTT+TGG + tig0018446:32091-32110 Msa1366150:intron 10.0%
!! TAGTTAAAAACAAAATAGTT+TGG - tig0018446:31277-31296 None:intergenic 15.0%
!! AAATGTACTATTATGATGTA+TGG + tig0018446:30636-30655 Msa1366150:CDS 20.0%
!!! TAATTTGCACAAAATTTTGT+TGG + tig0018446:31157-31176 Msa1366150:intron 20.0%
!! TCAATTAATTAAAAAGGGTA+TGG - tig0018446:31474-31493 None:intergenic 20.0%
!! CACACTCAATTAATTAAAAA+GGG - tig0018446:31479-31498 None:intergenic 20.0%
!! TTAAAGAAAGAAAATCGATA+TGG - tig0018446:31909-31928 None:intergenic 20.0%
!! TTCAAATGAATCCTTAAAAA+GGG - tig0018446:32187-32206 None:intergenic 20.0%
!! ATGAAATAGTAGTATTTCAT+AGG - tig0018446:33478-33497 None:intergenic 20.0%
!!! TTCAGTATTATTTTTTTGTG+TGG + tig0018446:33513-33532 Msa1366150:three_prime_UTR 20.0%
! GAAGAAAGATTGAATCTTTA+GGG - tig0018446:30186-30205 None:intergenic 25.0%
! TGCTTCAAAATTCACATTAA+TGG + tig0018446:30224-30243 Msa1366150:exon 25.0%
!!! GAATCTTTGTTGTTGAAATT+GGG - tig0018446:30381-30400 None:intergenic 25.0%
! TTCTAACTCTAGATCTATTA+GGG + tig0018446:30488-30507 Msa1366150:CDS 25.0%
!! TATAGAGATTTTACTCTTGA+TGG + tig0018446:30528-30547 Msa1366150:CDS 25.0%
!! ATAGAGATTTTACTCTTGAT+GGG + tig0018446:30529-30548 Msa1366150:CDS 25.0%
!!! TGTTTTGGAGATTTATAATG+AGG + tig0018446:30830-30849 Msa1366150:CDS 25.0%
! AAACTATTGAGCTATATAGA+TGG - tig0018446:31192-31211 None:intergenic 25.0%
! ATATAGCTCAATAGTTTATC+TGG + tig0018446:31195-31214 Msa1366150:intron 25.0%
!! CATATCTAAGGTTTAAGATT+AGG + tig0018446:31364-31383 Msa1366150:intron 25.0%
!! TTAAGATTAGGATTGCTATT+TGG + tig0018446:31376-31395 Msa1366150:intron 25.0%
! GCACACTCAATTAATTAAAA+AGG - tig0018446:31480-31499 None:intergenic 25.0%
!! TTTTCTTTCTTTAATCTTGC+AGG + tig0018446:31915-31934 Msa1366150:intron 25.0%
!! TTTTCTGTTTTCCCTTTTTA+AGG + tig0018446:32173-32192 Msa1366150:intron 25.0%
! CTTCAAATGAATCCTTAAAA+AGG - tig0018446:32188-32207 None:intergenic 25.0%
! AATTCTTGATCCTAAAATGA+CGG - tig0018446:32361-32380 None:intergenic 25.0%
! GTTTATCATGAAGTTACAAA+TGG + tig0018446:32395-32414 Msa1366150:CDS 25.0%
!!! TTTTTCAAAGTATTTGGACA+GGG - tig0018446:32930-32949 None:intergenic 25.0%
!!! ATTTTTCAAAGTATTTGGAC+AGG - tig0018446:32931-32950 None:intergenic 25.0%
!! TGTCCAAATACTTTGAAAAA+TGG + tig0018446:32930-32949 Msa1366150:CDS 25.0%
!!! ACTCCATTTTTCAAAGTATT+TGG - tig0018446:32936-32955 None:intergenic 25.0%
GGAAGAAAGATTGAATCTTT+AGG - tig0018446:30187-30206 None:intergenic 30.0%
! TCTTTCTTCCATTTCCTTTT+TGG + tig0018446:30197-30216 Msa1366150:five_prime_UTR 30.0%
! CTTTCTTCCATTTCCTTTTT+GGG + tig0018446:30198-30217 Msa1366150:five_prime_UTR 30.0%
!!! TTTTGAAGCAAAACCCAAAA+AGG - tig0018446:30214-30233 None:intergenic 30.0%
! TTGTTGTTGAAATTGGGATT+TGG - tig0018446:30375-30394 None:intergenic 30.0%
!! GGAATCTTTGTTGTTGAAAT+TGG - tig0018446:30382-30401 None:intergenic 30.0%
TTCTCGCAATAACTTCAATT+GGG - tig0018446:30416-30435 None:intergenic 30.0%
ATTCTCGCAATAACTTCAAT+TGG - tig0018446:30417-30436 None:intergenic 30.0%
CTTGCTTGTAAAACAGATAA+AGG - tig0018446:30468-30487 None:intergenic 30.0%
GTTCTAACTCTAGATCTATT+AGG + tig0018446:30487-30506 Msa1366150:CDS 30.0%
! TAGAGATTTTACTCTTGATG+GGG + tig0018446:30530-30549 Msa1366150:CDS 30.0%
CTTGTTCTACAAGAAATTTG+TGG + tig0018446:30581-30600 Msa1366150:CDS 30.0%
ACAAGAAATTTGTGGAATCA+AGG + tig0018446:30589-30608 Msa1366150:CDS 30.0%
TTTGTGGAATCAAGGATTAA+TGG + tig0018446:30597-30616 Msa1366150:CDS 30.0%
AAGGATTAATGGTGTGAAAT+TGG + tig0018446:30608-30627 Msa1366150:CDS 30.0%
AGGATTAATGGTGTGAAATT+GGG + tig0018446:30609-30628 Msa1366150:CDS 30.0%
!! TTTTGTTCAGGTTACTGTTT+TGG + tig0018446:30815-30834 Msa1366150:CDS 30.0%
! TATGATCTTTTGTCCACTAA+TGG + tig0018446:30858-30877 Msa1366150:CDS 30.0%
TGTGATGTAACATAACATGT+TGG + tig0018446:30955-30974 Msa1366150:intron 30.0%
! AGTCTGTTGTTGTACATTTT+AGG + tig0018446:31030-31049 Msa1366150:intron 30.0%
TTCTTCAGATCATATGATTC+TGG + tig0018446:31059-31078 Msa1366150:intron 30.0%
!! GATCATATGATTCTGGAATT+TGG + tig0018446:31066-31085 Msa1366150:intron 30.0%
!! TTGGCTTTAGGATTGTTATT+TGG + tig0018446:31085-31104 Msa1366150:intron 30.0%
TTTGTGAGAATATAGCGAAA+CGG - tig0018446:31113-31132 None:intergenic 30.0%
TGTTCTTCTGATCATATCTA+AGG + tig0018446:31352-31371 Msa1366150:intron 30.0%
TTCATGAGCATATCACTAAA+CGG - tig0018446:31404-31423 None:intergenic 30.0%
TTCATCAGATGTTTGTTTGA+AGG + tig0018446:31438-31457 Msa1366150:intron 30.0%
TCATCAGATGTTTGTTTGAA+GGG + tig0018446:31439-31458 Msa1366150:intron 30.0%
TAATTGAGTGTGCTAACATT+TGG + tig0018446:31487-31506 Msa1366150:intron 30.0%
ACAAGTTAAATTGCAGAAGT+AGG - tig0018446:31526-31545 None:intergenic 30.0%
!! ACTTCTGCAATTTAACTTGT+AGG + tig0018446:31526-31545 Msa1366150:intron 30.0%
!! ATTTAACTTGTAGGTCAAAC+TGG + tig0018446:31535-31554 Msa1366150:intron 30.0%
AAGAATGCAACCTATATATC+TGG + tig0018446:31578-31597 Msa1366150:CDS 30.0%
TGCTTCATTTCCAGATATAT+AGG - tig0018446:31591-31610 None:intergenic 30.0%
TATATATCTGGAAATGAAGC+AGG + tig0018446:31590-31609 Msa1366150:CDS 30.0%
ATATATCTGGAAATGAAGCA+GGG + tig0018446:31591-31610 Msa1366150:CDS 30.0%
CTCAAAAGAAATTCAGAAAG+TGG + tig0018446:31619-31638 Msa1366150:CDS 30.0%
!!! ACGACTTTTTTATTCTGATC+AGG + tig0018446:31761-31780 Msa1366150:intron 30.0%
TCAGAAAATATTGAACAAGC+TGG + tig0018446:31840-31859 Msa1366150:CDS 30.0%
ACAAGAGTTGGAAAAGAAAT+TGG + tig0018446:32572-32591 Msa1366150:CDS 30.0%
TGAAAACGAGTCAAAAGAAA+TGG + tig0018446:32752-32771 Msa1366150:CDS 30.0%
! AGTTTTCTCATAAACCCATT+CGG - tig0018446:32780-32799 None:intergenic 30.0%
! AATGGTTAAATCGATGGATT+TGG + tig0018446:32833-32852 Msa1366150:CDS 30.0%
AGTACAGTATATGAAGATGA+AGG + tig0018446:33008-33027 Msa1366150:CDS 30.0%
AGGAAAATAATGGTTCCAAT+AGG + tig0018446:33165-33184 Msa1366150:CDS 30.0%
AAAGCTGTACAATATGTGAT+TGG + tig0018446:33418-33437 Msa1366150:three_prime_UTR 30.0%
AGGTAAATGATCACATTTCA+AGG - tig0018446:33458-33477 None:intergenic 30.0%
TTCAATCTCTTCTCTCAACT+GGG + tig0018446:30148-30167 Msa1366150:five_prime_UTR 35.0%
AGCAAAACCCAAAAAGGAAA+TGG - tig0018446:30208-30227 None:intergenic 35.0%
GAGTTATCAAATGCGTTGAA+TGG - tig0018446:30281-30300 None:intergenic 35.0%
! AAGCATCGTCTCAATTTCAA+TGG + tig0018446:30309-30328 Msa1366150:CDS 35.0%
!! TGAAATTGGGATTTGGTGAT+GGG - tig0018446:30368-30387 None:intergenic 35.0%
!! TTGAAATTGGGATTTGGTGA+TGG - tig0018446:30369-30388 None:intergenic 35.0%
ATAACTTCAATTGGGTGTTC+AGG - tig0018446:30408-30427 None:intergenic 35.0%
CTCTAGATCTATTAGGGTTA+AGG + tig0018446:30494-30513 Msa1366150:CDS 35.0%
!! ATTAGGGTTAAGGCTGATTT+TGG + tig0018446:30504-30523 Msa1366150:CDS 35.0%
GGATTAATGGTGTGAAATTG+GGG + tig0018446:30610-30629 Msa1366150:CDS 35.0%
GATTAATGGTGTGAAATTGG+GGG + tig0018446:30611-30630 Msa1366150:CDS 35.0%
! AGTGATGGTGATTCTTCTAA+AGG + tig0018446:30771-30790 Msa1366150:CDS 35.0%
! GTGATGGTGATTCTTCTAAA+GGG + tig0018446:30772-30791 Msa1366150:CDS 35.0%
!! TCTTCTAAAGGGTTTTGTCT+CGG + tig0018446:30783-30802 Msa1366150:CDS 35.0%
GTCTAAGAACAATGCTTCAA+AGG + tig0018446:30917-30936 Msa1366150:CDS 35.0%
!! TGATTCTGGAATTTGGCTTT+AGG + tig0018446:31073-31092 Msa1366150:intron 35.0%
AATTGTATGTGCTGAGCATT+TGG + tig0018446:31296-31315 Msa1366150:intron 35.0%
CTATAGAGTACACAAGAAAG+TGG - tig0018446:31328-31347 None:intergenic 35.0%
CACTTTCTTGTGTACTCTAT+AGG + tig0018446:31326-31345 Msa1366150:intron 35.0%
AAATTGCAGAAGTAGGAAAG+TGG - tig0018446:31519-31538 None:intergenic 35.0%
! AAAGCACTCTTTGTAATGAC+AGG + tig0018446:31660-31679 Msa1366150:CDS 35.0%
GTTCTGATCGAATTTATCGT+TGG + tig0018446:31728-31747 Msa1366150:intron 35.0%
TGATCGAATTTATCGTTGGT+TGG + tig0018446:31732-31751 Msa1366150:intron 35.0%
CAGACTGCAAAAATTAACCA+AGG + tig0018446:31974-31993 Msa1366150:intron 35.0%
ATGTGAATCACCATTTGCAA+TGG - tig0018446:32029-32048 None:intergenic 35.0%
!! GTAAGTTTGCTGTCTCTAAA+AGG - tig0018446:32055-32074 None:intergenic 35.0%
AACTTGGAATAACATGGAAC+AGG - tig0018446:32131-32150 None:intergenic 35.0%
AGAGCTAACTTGGAATAACA+TGG - tig0018446:32137-32156 None:intergenic 35.0%
ATTGTCTTGTGGATCTCTTT+AGG - tig0018446:32255-32274 None:intergenic 35.0%
ACAATCTCTACCCTAGAATA+TGG + tig0018446:32270-32289 Msa1366150:CDS 35.0%
ACGAACTATACATTTCGCTT+TGG - tig0018446:32298-32317 None:intergenic 35.0%
AAAGCGAAATGTATAGTTCG+TGG + tig0018446:32297-32316 Msa1366150:CDS 35.0%
!! TCTTCTTCAACCGTCATTTT+AGG + tig0018446:32348-32367 Msa1366150:CDS 35.0%
CAAAAAGCTCATGAAGAAAG+AGG + tig0018446:32455-32474 Msa1366150:CDS 35.0%
GCTTAGTGTTTACAAAAGCA+CGG + tig0018446:32800-32819 Msa1366150:CDS 35.0%
TCTTGGAATGGTTAAATCGA+TGG + tig0018446:32827-32846 Msa1366150:CDS 35.0%
! TAAATCGATGGATTTGGACA+TGG + tig0018446:32839-32858 Msa1366150:CDS 35.0%
TATGTTTGTGCACCAAACTT+TGG + tig0018446:32969-32988 Msa1366150:CDS 35.0%
!! CATGCTTTTTGACCAAAGTT+TGG - tig0018446:32984-33003 None:intergenic 35.0%
TGATAAAGTGGAAGAAGATG+AGG + tig0018446:33055-33074 Msa1366150:CDS 35.0%
TAACAAAAGTCCGAAGATAG+AGG + tig0018446:33124-33143 Msa1366150:CDS 35.0%
CCAGAATAATCCTCTATCTT+CGG - tig0018446:33137-33156 None:intergenic 35.0%
CACAACATATTTACTCTCTG+TGG + tig0018446:33200-33219 Msa1366150:CDS 35.0%
!!! CATCAGACCTCTTTTTTGTA+GGG - tig0018446:33262-33281 None:intergenic 35.0%
!!! TCATCAGACCTCTTTTTTGT+AGG - tig0018446:33263-33282 None:intergenic 35.0%
TTCTTCTCACTTGATTTCAC+AGG - tig0018446:33308-33327 None:intergenic 35.0%
TGTGAAATCAAGTGAGAAGA+AGG + tig0018446:33307-33326 Msa1366150:CDS 35.0%
!!! TGTTTTAAGAGTGTCCAACA+AGG + tig0018446:33334-33353 Msa1366150:CDS 35.0%
! AACTTGGAAGCATACGTTAT+TGG + tig0018446:33359-33378 Msa1366150:CDS 35.0%
GGTATTTACTCAGTATGGAA+TGG - tig0018446:33605-33624 None:intergenic 35.0%
CTTCAATCTCTTCTCTCAAC+TGG + tig0018446:30147-30166 Msa1366150:five_prime_UTR 40.0%
ATTTGCTTGGAAGAGGAAGA+AGG - tig0018446:30258-30277 None:intergenic 40.0%
! TGAATGGATTTGCTTGGAAG+AGG - tig0018446:30265-30284 None:intergenic 40.0%
! ATGCGTTGAATGGATTTGCT+TGG - tig0018446:30271-30290 None:intergenic 40.0%
! AAAGGCTTGTCTTTTCGATC+CGG - tig0018446:30450-30469 None:intergenic 40.0%
ATTATGATGTATGGACCGAC+TGG + tig0018446:30645-30664 Msa1366150:CDS 40.0%
GGTAAGAGTCATACGATGTT+TGG + tig0018446:30672-30691 Msa1366150:CDS 40.0%
! GATTGTGTATAGGGCTTTGA+GGG + tig0018446:30713-30732 Msa1366150:CDS 40.0%
TTGAGGGATATTCTTGGAGA+TGG + tig0018446:30729-30748 Msa1366150:CDS 40.0%
TGAGGGATATTCTTGGAGAT+GGG + tig0018446:30730-30749 Msa1366150:CDS 40.0%
! ACAGATTCTGAAGGTAGTGA+TGG + tig0018446:30756-30775 Msa1366150:CDS 40.0%
!! CTTCTAAAGGGTTTTGTCTC+GGG + tig0018446:30784-30803 Msa1366150:CDS 40.0%
!! TTCTAAAGGGTTTTGTCTCG+GGG + tig0018446:30785-30804 Msa1366150:CDS 40.0%
! GATCTTTTGTCCACTAATGG+AGG + tig0018446:30861-30880 Msa1366150:CDS 40.0%
TGAGTGTGCTAACATTTGGA+TGG + tig0018446:31491-31510 Msa1366150:intron 40.0%
TAGGTCAAACTGGAAGTGAT+GGG + tig0018446:31545-31564 Msa1366150:intron 40.0%
!!! GCATGGTATAGTTGCTTTTG+TGG + tig0018446:31699-31718 Msa1366150:intron 40.0%
!!! GGTATAGTTGCTTTTGTGGA+AGG + tig0018446:31703-31722 Msa1366150:intron 40.0%
!!! ATAGTTGCTTTTGTGGAAGG+TGG + tig0018446:31706-31725 Msa1366150:intron 40.0%
ATTGAACAAGCTGGTCAAAC+TGG + tig0018446:31849-31868 Msa1366150:CDS 40.0%
! TGGATTTGAGGCAAAAATGC+AGG + tig0018446:31869-31888 Msa1366150:CDS 40.0%
TCTTCAGCGCTATATTTCCT+TGG - tig0018446:31994-32013 None:intergenic 40.0%
! AAATATAGCGCTGAAGAGAG+TGG + tig0018446:31997-32016 Msa1366150:CDS 40.0%
CAGCATCAAAAGAGCTAACT+TGG - tig0018446:32147-32166 None:intergenic 40.0%
!! TTGTGGATCTCTTTAGGATC+AGG - tig0018446:32249-32268 None:intergenic 40.0%
AGGATCAAGAATTGCTGCAA+TGG + tig0018446:32368-32387 Msa1366150:CDS 40.0%
TGAGGAGGAGATTAACCTAA+AGG + tig0018446:32524-32543 Msa1366150:CDS 40.0%
AGAGGAAGAGAATGGAAGAA+AGG + tig0018446:32634-32653 Msa1366150:CDS 40.0%
AGGAGGAAGTTGAAATTCTG+AGG + tig0018446:32670-32689 Msa1366150:CDS 40.0%
! TGAAATTCTGAGGAAGAGAC+TGG + tig0018446:32680-32699 Msa1366150:CDS 40.0%
TTCTTCAAAGCATGAGCGTA+AGG + tig0018446:32728-32747 Msa1366150:CDS 40.0%
TCAAAAGAAATGGAGCCGAA+TGG + tig0018446:32762-32781 Msa1366150:CDS 40.0%
CAAAAGAAATGGAGCCGAAT+GGG + tig0018446:32763-32782 Msa1366150:CDS 40.0%
! TACAAAAGCACGGATGATCT+TGG + tig0018446:32810-32829 Msa1366150:CDS 40.0%
! TCAAAGTATTTGGACAGGGT+TGG - tig0018446:32926-32945 None:intergenic 40.0%
AGAGCAGGATCATGATAAAG+TGG + tig0018446:33043-33062 Msa1366150:CDS 40.0%
AAGAGGTGATAGAGGAAAAG+AGG + tig0018446:33087-33106 Msa1366150:CDS 40.0%
AGAGGTGATAGAGGAAAAGA+GGG + tig0018446:33088-33107 Msa1366150:CDS 40.0%
CCGAAGATAGAGGATTATTC+TGG + tig0018446:33134-33153 Msa1366150:CDS 40.0%
GGAGCTGACAAGGAAAATAA+TGG + tig0018446:33155-33174 Msa1366150:CDS 40.0%
GTGAATTCTCAGCATCCTAT+TGG - tig0018446:33183-33202 None:intergenic 40.0%
TTACTCTCTGTGGAAACCAA+AGG + tig0018446:33210-33229 Msa1366150:CDS 40.0%
TACTCTCTGTGGAAACCAAA+GGG + tig0018446:33211-33230 Msa1366150:CDS 40.0%
! AGGGATTGGTGTTCCATATT+GGG - tig0018446:33243-33262 None:intergenic 40.0%
! TAGGGATTGGTGTTCCATAT+TGG - tig0018446:33244-33263 None:intergenic 40.0%
CACCAATCCCTACAAAAAAG+AGG + tig0018446:33252-33271 Msa1366150:CDS 40.0%
!!! GACCTCTTTTTTGTAGGGAT+TGG - tig0018446:33257-33276 None:intergenic 40.0%
GCTGTACAATATGTGATTGG+AGG + tig0018446:33421-33440 Msa1366150:three_prime_UTR 40.0%
! TTGGAAGAGGAAGAAGGTGT+GGG - tig0018446:30252-30271 None:intergenic 45.0%
! TTGAGACGATGCTTTGAACG+TGG - tig0018446:30303-30322 None:intergenic 45.0%
TTCAATTGGGTGTTCAGGAG+GGG - tig0018446:30403-30422 None:intergenic 45.0%
CTTCAATTGGGTGTTCAGGA+GGG - tig0018446:30404-30423 None:intergenic 45.0%
ACTTCAATTGGGTGTTCAGG+AGG - tig0018446:30405-30424 None:intergenic 45.0%
! AAGGCTTGTCTTTTCGATCC+GGG - tig0018446:30449-30468 None:intergenic 45.0%
! TGTTTCTGAGGAAGAGGAAC+TGG + tig0018446:30557-30576 Msa1366150:CDS 45.0%
TGACTCTTACCAGAACCAGT+CGG - tig0018446:30663-30682 None:intergenic 45.0%
GATGTTTGGATGTTCGAAGC+AGG + tig0018446:30686-30705 Msa1366150:CDS 45.0%
GGATTGTGTATAGGGCTTTG+AGG + tig0018446:30712-30731 Msa1366150:CDS 45.0%
!! AGGGCTTTGAGGGATATTCT+TGG + tig0018446:30723-30742 Msa1366150:CDS 45.0%
GAGGGATATTCTTGGAGATG+GGG + tig0018446:30731-30750 Msa1366150:CDS 45.0%
GATGGGGATACAGATTCTGA+AGG + tig0018446:30747-30766 Msa1366150:CDS 45.0%
! CTTTTGTCCACTAATGGAGG+TGG + tig0018446:30864-30883 Msa1366150:CDS 45.0%
GTAGGTCAAACTGGAAGTGA+TGG + tig0018446:31544-31563 Msa1366150:intron 45.0%
AGGTCAAACTGGAAGTGATG+GGG + tig0018446:31546-31565 Msa1366150:intron 45.0%
! ACTGGAAGTGATGGGGAAAA+AGG + tig0018446:31553-31572 Msa1366150:CDS 45.0%
TTCAGAAAGTGGAGAAGCGA+AGG + tig0018446:31630-31649 Msa1366150:CDS 45.0%
!! GAGTTCTAGAAGTCACTGCA+TGG + tig0018446:31682-31701 Msa1366150:CDS 45.0%
ATACTCGATGTCCCAACAGT+GGG + tig0018446:31786-31805 Msa1366150:CDS 45.0%
AGCTGGTCAAACTGGATTTG+AGG + tig0018446:31857-31876 Msa1366150:CDS 45.0%
GTGGTTGAGTCCATTGCAAA+TGG + tig0018446:32016-32035 Msa1366150:CDS 45.0%
CAAACTTACCATGCTTCTGC+AGG + tig0018446:32066-32085 Msa1366150:CDS 45.0%
GTTGATTACCTGCAGAAGCA+TGG - tig0018446:32077-32096 None:intergenic 45.0%
CTAGGGTAGAGATTGTCTTG+TGG - tig0018446:32266-32285 None:intergenic 45.0%
! CGCTTTGGCTCCATATTCTA+GGG - tig0018446:32283-32302 None:intergenic 45.0%
! TCGCTTTGGCTCCATATTCT+AGG - tig0018446:32284-32303 None:intergenic 45.0%
AAGAGTCTTCCTCCTTAACC+GGG - tig0018446:32332-32351 None:intergenic 45.0%
GAAGAGTCTTCCTCCTTAAC+CGG - tig0018446:32333-32352 None:intergenic 45.0%
TGCTGTGCTAAGAGCTAAAG+TGG + tig0018446:32485-32504 Msa1366150:CDS 45.0%
TTAATCTCCTCCTCACTTGC+AGG - tig0018446:32519-32538 None:intergenic 45.0%
GGGTTCGTTCGTTTACCTTT+AGG - tig0018446:32542-32561 None:intergenic 45.0%
TTTCCAACTCTTGTCTCAGC+TGG - tig0018446:32566-32585 None:intergenic 45.0%
!! GACCAATGAGTTTGTTGAGC+TGG + tig0018446:32611-32630 Msa1366150:CDS 45.0%
CTCCAGCTCAACAAACTCAT+TGG - tig0018446:32616-32635 None:intergenic 45.0%
!! ATGAGTTTGTTGAGCTGGAG+AGG + tig0018446:32616-32635 Msa1366150:CDS 45.0%
AGAAAGGATATTGCAGCAGC+AGG + tig0018446:32650-32669 Msa1366150:CDS 45.0%
AAGCACGGATGATCTTGGAA+TGG + tig0018446:32815-32834 Msa1366150:CDS 45.0%
GAAGTTATTGTCGGCATGCA+AGG + tig0018446:32888-32907 Msa1366150:CDS 45.0%
!! GTATTTGGACAGGGTTGGTT+TGG - tig0018446:32921-32940 None:intergenic 45.0%
AGTGGAAGAAGATGAGGAAG+TGG + tig0018446:33061-33080 Msa1366150:CDS 45.0%
AGATGAGGAAGTGGAGAAAG+AGG + tig0018446:33070-33089 Msa1366150:CDS 45.0%
AGTGGAGAAAGAGGTGATAG+AGG + tig0018446:33079-33098 Msa1366150:CDS 45.0%
!! GGATTATTCTGGAGCTGACA+AGG + tig0018446:33145-33164 Msa1366150:CDS 45.0%
AGTGTCCAACAAGGAGAACT+TGG + tig0018446:33343-33362 Msa1366150:CDS 45.0%
TGCTTCCAAGTTCTCCTTGT+TGG - tig0018446:33351-33370 None:intergenic 45.0%
CTTGGAAGAGGAAGAAGGTG+TGG - tig0018446:30253-30272 None:intergenic 50.0%
!! TTTGGTGATGGGTGTGGATG+TGG - tig0018446:30357-30376 None:intergenic 50.0%
!! TTGGGATTTGGTGATGGGTG+TGG - tig0018446:30363-30382 None:intergenic 50.0%
TGCGAGAATTCGTGACTACC+CGG + tig0018446:30428-30447 Msa1366150:CDS 50.0%
!! TGATGGGGTGTCTGTTTCTG+AGG + tig0018446:30545-30564 Msa1366150:CDS 50.0%
!! GGTGTCTGTTTCTGAGGAAG+AGG + tig0018446:30551-30570 Msa1366150:CDS 50.0%
! ATGTATGGACCGACTGGTTC+TGG + tig0018446:30651-30670 Msa1366150:CDS 50.0%
GTTTGGATGTTCGAAGCAGG+CGG + tig0018446:30689-30708 Msa1366150:CDS 50.0%
TTTGGATGTTCGAAGCAGGC+GGG + tig0018446:30690-30709 Msa1366150:CDS 50.0%
TTGTCCACTAATGGAGGTGG+TGG + tig0018446:30867-30886 Msa1366150:CDS 50.0%
! GTGGAGGGTTTGGATTTGGT+TGG + tig0018446:30895-30914 Msa1366150:CDS 50.0%
GATACTCGATGTCCCAACAG+TGG + tig0018446:31785-31804 Msa1366150:CDS 50.0%
ACGGCTAATGCTTGTGGACA+TGG + tig0018446:31812-31831 Msa1366150:CDS 50.0%
CTAATGCTTGTGGACATGGC+AGG + tig0018446:31816-31835 Msa1366150:CDS 50.0%
AGAGTCTTCCTCCTTAACCG+GGG - tig0018446:32331-32350 None:intergenic 50.0%
TGAGCTGGAGAGGAAGAGAA+TGG + tig0018446:32626-32645 Msa1366150:CDS 50.0%
AAGGATATTGCAGCAGCAGG+AGG + tig0018446:32653-32672 Msa1366150:CDS 50.0%
ATAACTTCGCGCGCAAGGAA+TGG - tig0018446:32876-32895 None:intergenic 50.0%
CTTGCGCGCGAAGTTATTGT+CGG + tig0018446:32879-32898 Msa1366150:CDS 50.0%
AGGAGAAGAAGAAGCAGAGC+AGG + tig0018446:33028-33047 Msa1366150:CDS 50.0%
CATATTGGGAGAGCTCCCTT+TGG - tig0018446:33229-33248 None:intergenic 50.0%
CAAAGGGAGCTCTCCCAATA+TGG + tig0018446:33227-33246 Msa1366150:CDS 50.0%
TTGGATGTTCGAAGCAGGCG+GGG + tig0018446:30691-30710 Msa1366150:CDS 55.0%
AGCAGGCGGGGATTGTGTAT+AGG + tig0018446:30703-30722 Msa1366150:CDS 55.0%
GCAGGCGGGGATTGTGTATA+GGG + tig0018446:30704-30723 Msa1366150:CDS 55.0%
!! AAGGGTTTTGTCTCGGGGTG+AGG + tig0018446:30790-30809 Msa1366150:CDS 55.0%
! CGGGGTGAGGACTTTTGTTC+AGG + tig0018446:30803-30822 Msa1366150:CDS 55.0%
! TCCACTAATGGAGGTGGTGG+TGG + tig0018446:30870-30889 Msa1366150:CDS 55.0%
TCCACCACCACCTCCATTAG+TGG - tig0018446:30874-30893 None:intergenic 55.0%
!! ACTAATGGAGGTGGTGGTGG+AGG + tig0018446:30873-30892 Msa1366150:CDS 55.0%
GGAGGTGGAGGGTTTGGATT+TGG + tig0018446:30891-30910 Msa1366150:CDS 55.0%
ATGTCCCAACAGTGGGAGGA+CGG + tig0018446:31793-31812 Msa1366150:CDS 55.0%
TTAGCCGTCCTCCCACTGTT+GGG - tig0018446:31800-31819 None:intergenic 55.0%
ATTAGCCGTCCTCCCACTGT+TGG - tig0018446:31801-31820 None:intergenic 55.0%
AGTTCGTGGTCCTCATACCC+CGG + tig0018446:32311-32330 Msa1366150:CDS 55.0%
TGGTCCTCATACCCCGGTTA+AGG + tig0018446:32317-32336 Msa1366150:CDS 55.0%
TCCTCATACCCCGGTTAAGG+AGG + tig0018446:32320-32339 Msa1366150:CDS 55.0%
TCCTCCTTAACCGGGGTATG+AGG - tig0018446:32324-32343 None:intergenic 55.0%
GGAAACAGCTCCTGCAAGTG+AGG + tig0018446:32506-32525 Msa1366150:CDS 55.0%
AACAGCTCCTGCAAGTGAGG+AGG + tig0018446:32509-32528 Msa1366150:CDS 55.0%
CAACTCTTGTCTCAGCTGGC+GGG - tig0018446:32562-32581 None:intergenic 55.0%
CCAACTCTTGTCTCAGCTGG+CGG - tig0018446:32563-32582 None:intergenic 55.0%
CGACAATAACTTCGCGCGCA+AGG - tig0018446:32881-32900 None:intergenic 55.0%
! GGATGTGGTGGTGTAGGTGC+TGG - tig0018446:30342-30361 None:intergenic 60.0%
! GGGTGTGGATGTGGTGGTGT+AGG - tig0018446:30348-30367 None:intergenic 60.0%
!! GGTGATGGGTGTGGATGTGG+TGG - tig0018446:30354-30373 None:intergenic 60.0%
!! AATGGAGGTGGTGGTGGAGG+TGG + tig0018446:30876-30895 Msa1366150:CDS 60.0%
CTCGATGTCCCAACAGTGGG+AGG + tig0018446:31789-31808 Msa1366150:CDS 60.0%
GGGAGGACGGCTAATGCTTG+TGG + tig0018446:31806-31825 Msa1366150:CDS 60.0%
CCGCCAGCTGAGACAAGAGT+TGG + tig0018446:32560-32579 Msa1366150:CDS 60.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG + tig0018446:30880-30899 Msa1366150:CDS 65.0%
!! GGTGGTGGAGGTGGAGGGTT+TGG + tig0018446:30885-30904 Msa1366150:CDS 65.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG + tig0018446:30879-30898 Msa1366150:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0018446 gene 30104 33627 30104 ID=Msa1366150;Name=Msa1366150
tig0018446 mRNA 30104 33627 30104 ID=Msa1366150-mRNA-1;Parent=Msa1366150;Name=Msa1366150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=139|1|1|1|1|1|5|239|754
tig0018446 exon 30104 30938 30104 ID=Msa1366150-mRNA-1:exon:14963;Parent=Msa1366150-mRNA-1
tig0018446 exon 31548 31703 31548 ID=Msa1366150-mRNA-1:exon:14964;Parent=Msa1366150-mRNA-1
tig0018446 exon 31783 31890 31783 ID=Msa1366150-mRNA-1:exon:14965;Parent=Msa1366150-mRNA-1
tig0018446 exon 31977 32087 31977 ID=Msa1366150-mRNA-1:exon:14966;Parent=Msa1366150-mRNA-1
tig0018446 exon 32195 33627 32195 ID=Msa1366150-mRNA-1:exon:14967;Parent=Msa1366150-mRNA-1
tig0018446 five_prime_UTR 30104 30242 30104 ID=Msa1366150-mRNA-1:five_prime_utr;Parent=Msa1366150-mRNA-1
tig0018446 CDS 30243 30938 30243 ID=Msa1366150-mRNA-1:cds;Parent=Msa1366150-mRNA-1
tig0018446 CDS 31548 31703 31548 ID=Msa1366150-mRNA-1:cds;Parent=Msa1366150-mRNA-1
tig0018446 CDS 31783 31890 31783 ID=Msa1366150-mRNA-1:cds;Parent=Msa1366150-mRNA-1
tig0018446 CDS 31977 32087 31977 ID=Msa1366150-mRNA-1:cds;Parent=Msa1366150-mRNA-1
tig0018446 CDS 32195 33388 32195 ID=Msa1366150-mRNA-1:cds;Parent=Msa1366150-mRNA-1
tig0018446 three_prime_UTR 33389 33627 33389 ID=Msa1366150-mRNA-1:three_prime_utr;Parent=Msa1366150-mRNA-1
Gene Sequence

>Msa1366150

ATGGCTCCCACACCTTCTTCCTCTTCCAAGCAAATCCATTCAACGCATTTGATAACTCCACGTTCAAAGCATCGTCTCAATTTCAATGGTCTCAAACCAGCACCTACACCACCACATCCACACCCATCACCAAATCCCAATTTCAACAACAAAGATTCCCCTCCTGAACACCCAATTGAAGTTATTGCGAGAATTCGTGACTACCCGGATCGAAAAGACAAGCCTTTATCTGTTTTACAAGCAAGTTCTAACTCTAGATCTATTAGGGTTAAGGCTGATTTTGGTTATAGAGATTTTACTCTTGATGGGGTGTCTGTTTCTGAGGAAGAGGAACTGGACTTGTTCTACAAGAAATTTGTGGAATCAAGGATTAATGGTGTGAAATTGGGGGATAAATGTACTATTATGATGTATGGACCGACTGGTTCTGGTAAGAGTCATACGATGTTTGGATGTTCGAAGCAGGCGGGGATTGTGTATAGGGCTTTGAGGGATATTCTTGGAGATGGGGATACAGATTCTGAAGGTAGTGATGGTGATTCTTCTAAAGGGTTTTGTCTCGGGGTGAGGACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTTTGTCCACTAATGGAGGTGGTGGTGGAGGTGGAGGGTTTGGATTTGGTTGGTCTAAGAACAATGCTTCAAAGGTCAAACTGGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACTCTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTGATACTCGATGTCCCAACAGTGGGAGGACGGCTAATGCTTGTGGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATTAACCAAGGAAATATAGCGCTGAAGAGAGTGGTTGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGATTCATTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGCGCAAGTCCTGATCCTAAAGAGATCCACAAGACAATCTCTACCCTAGAATATGGAGCCAAAGCGAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAAGACTCTTCTTCAACCGTCATTTTAGGATCAAGAATTGCTGCAATGGATGAGTTTATCATGAAGTTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAACGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGTGCTAAGAGCTAAAGTGGAAACAGCTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAACGAACGAACCCGCCAGCTGAGACAAGAGTTGGAAAAGAAATTGGAAGAGTGTCAAAGAATGACCAATGAGTTTGTTGAGCTGGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGACTGGAAGAAATTGAGTTGCAGCTGTGCAGTTCTTCAAAGCATGAGCGTAAGGATGAAAACGAGTCAAAAGAAATGGAGCCGAATGGGTTTATGAGAAAACTGCTTAGTGTTTACAAAAGCACGGATGATCTTGGAATGGTTAAATCGATGGATTTGGACATGGACGATCAAGAACCATTCCTTGCGCGCGAAGTTATTGTCGGCATGCAAGGCATTTCACCAAACCAACCCTGTCCAAATACTTTGAAAAATGGAGTACAAGAAGATGCTTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTCAGTACAGTATATGAAGATGAAGGAGAAGAAGAAGCAGAGCAGGATCATGATAAAGTGGAAGAAGATGAGGAAGTGGAGAAAGAGGTGATAGAGGAAAAGAGGGTATGTAGTGTTGTTAACAAAAGTCCGAAGATAGAGGATTATTCTGGAGCTGACAAGGAAAATAATGGTTCCAATAGGATGCTGAGAATTCACAACATATTTACTCTCTGTGGAAACCAAAGGGAGCTCTCCCAATATGGAACACCAATCCCTACAAAAAAGAGGTCTGATGAAAGTTTTGATTTCAAATGTTCTCCTGTGAAATCAAGTGAGAAGAAGGATTCTGTTTTAAGAGTGTCCAACAAGGAGAACTTGGAAGCATACGTTATTGGAAATTAG
Protein sequence

>Msa1366150

MAPTPSSSSKQIHSTHLITPRSKHRLNFNGLKPAPTPPHPHPSPNPNFNNKDSPPEHPIEVIARIRDYPDRKDKPLSVLQASSNSRSIRVKADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGSDGDSSKGFCLGVRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKNNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAVLRAKVETAPASEEEINLKVNERTRQLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVEILRKRLEEIELQLCSSSKHERKDENESKEMEPNGFMRKLLSVYKSTDDLGMVKSMDLDMDDQEPFLAREVIVGMQGISPNQPCPNTLKNGVQEDAYVCAPNFGQKACLSTVYEDEGEEEAEQDHDKVEEDEEVEKEVIEEKRVCSVVNKSPKIEDYSGADKENNGSNRMLRIHNIFTLCGNQRELSQYGTPIPTKKRSDESFDFKCSPVKSSEKKDSVLRVSNKENLEAYVIGN*