AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249510 MtrunA17_Chr8g0365071 97.076 342 10 0 1 342 1 342 0.0 690
Msa1249510 MtrunA17_Chr5g0413701 81.322 348 51 3 2 342 3 343 0.0 582
Msa1249510 MtrunA17_Chr3g0126551 66.343 309 89 3 44 337 45 353 1.38e-145 415
Msa1249510 MtrunA17_Chr3g0117881 61.224 294 110 1 51 340 41 334 2.67e-143 408
Msa1249510 MtrunA17_Chr1g0158851 64.379 306 96 3 44 337 53 357 8.87e-139 398
Msa1249510 MtrunA17_Chr5g0394371 36.404 228 136 7 71 293 42 265 9.88e-39 140
Msa1249510 MtrunA17_Chr1g0150851 30.769 273 159 9 45 295 21 285 1.88e-35 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249510 AT1G23820.1 78.313 332 70 2 11 342 5 334 0.0 539
Msa1249510 AT1G70310.1 75.802 343 79 2 1 342 1 340 0.0 536
Msa1249510 AT1G23820.2 78.182 275 59 1 4 278 42 315 1.18e-157 445
Msa1249510 AT5G53120.1 65.260 308 90 3 48 339 49 355 2.14e-143 410
Msa1249510 AT5G53120.4 65.260 308 90 3 48 339 49 355 2.14e-143 410
Msa1249510 AT5G53120.2 65.260 308 90 3 48 339 49 355 2.14e-143 410
Msa1249510 AT5G53120.5 65.260 308 90 3 48 339 49 355 2.14e-143 410
Msa1249510 AT5G53120.3 65.260 308 90 3 48 339 49 355 2.14e-143 410
Msa1249510 AT5G53120.7 65.260 308 90 3 48 339 66 372 5.63e-143 409
Msa1249510 AT5G53120.6 59.701 335 91 4 48 339 49 382 1.07e-138 399
Msa1249510 AT5G19530.1 31.783 258 164 7 68 320 47 297 4.53e-38 139
Msa1249510 AT5G19530.2 31.783 258 164 7 68 320 40 290 5.00e-38 139

Find 101 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGAAGACCATGACTTTC+TGG 0.202805 8_2:+44174274 None:intergenic
GAGGAGTAACTGTTTATTTC+AGG 0.213863 8_2:-44170062 Msa1249510:three_prime_UTR
TGGAATAGAATAAAGGAAAA+AGG 0.245896 8_2:+44178278 None:intergenic
GTATCTTAGGTTCTTTGATT+TGG 0.272891 8_2:-44169830 Msa1249510:three_prime_UTR
ATATGGCAAGGTTCTTGTTT+TGG 0.280455 8_2:-44174143 Msa1249510:CDS
GGTGTTTCATCTGTGATTCC+TGG 0.309804 8_2:-44178018 Msa1249510:CDS
CCAGAAAGTCATGGTCTTCC+AGG 0.315838 8_2:-44174274 Msa1249510:intron
TGGCGTGTCTTGAATGCTTT+TGG 0.323325 8_2:-44169852 Msa1249510:three_prime_UTR
GATGATGAAGAAGAGAATAA+TGG 0.323969 8_2:-44178099 Msa1249510:CDS
CAGGATAATGACAAAGTTGA+TGG 0.324169 8_2:-44170043 Msa1249510:three_prime_UTR
TAATATCCTAAGGCAGTGTT+TGG 0.335057 8_2:-44178396 Msa1249510:five_prime_UTR
ATGATGAAGAAGAGAATAAT+GGG 0.335353 8_2:-44178098 Msa1249510:CDS
TTGGTTATTGGTGGAGGTGA+TGG 0.346832 8_2:-44173662 Msa1249510:CDS
CTCTATTTCTGAGCCCAAAA+AGG 0.350393 8_2:-44174050 Msa1249510:intron
TTTGAAAATCTGACGACAAT+TGG 0.351640 8_2:+44172583 None:intergenic
GAAGATGAGTGATCATTTCT+TGG 0.351645 8_2:+44174080 None:intergenic
TTGAGAAATTATTGGAGAAA+TGG 0.354209 8_2:+44178258 None:intergenic
ACTGCATCATAAGTTCCTTC+TGG 0.359338 8_2:+44172857 None:intergenic
GATGAAACACCATTACCATT+TGG 0.374994 8_2:+44178030 None:intergenic
AGAAGAGAATAATGGGGTTT+CGG 0.378027 8_2:-44178091 Msa1249510:CDS
TTAAACCCTACTGCAACTTC+AGG 0.398829 8_2:+44173216 None:intergenic
ATTGTAACATGATGTTTAAA+TGG 0.399711 8_2:+44169757 None:intergenic
AGGCTCTGTTTGGCTTTGAC+TGG 0.400351 8_2:+44178227 None:intergenic
GCACTCAGGCTGAAAGTATA+TGG 0.405219 8_2:-44172637 Msa1249510:CDS
ATGAAACACCATTACCATTT+GGG 0.414247 8_2:+44178031 None:intergenic
AATGGCTGCTGCAGAGAGTA+TGG 0.419913 8_2:-44178154 Msa1249510:CDS
CATTTGTGAAATTGACAATA+TGG 0.421750 8_2:-44173591 Msa1249510:CDS
GGAGAAATGGAATAGAATAA+AGG 0.422199 8_2:+44178271 None:intergenic
AACTTATGATGCAGTTATAG+TGG 0.422946 8_2:-44172849 Msa1249510:CDS
TTATTAGCTAAGGCTCTGTT+TGG 0.426988 8_2:+44178217 None:intergenic
GTGGATTCATCTGACCCTAT+TGG 0.434928 8_2:-44172830 Msa1249510:intron
TCATTTGCGAAGAGGAAGAT+TGG 0.443392 8_2:-44170221 Msa1249510:CDS
CATAGGTGGTCATGTTTATG+AGG 0.451780 8_2:+44170000 None:intergenic
GTTATTGGTGGAGGTGATGG+AGG 0.453500 8_2:-44173659 Msa1249510:CDS
TACTCCTCGACATCAAATTT+AGG 0.454243 8_2:+44170077 None:intergenic
AAAACTAACCAGGCCACATT+GGG 0.461244 8_2:+44177977 None:intergenic
GGGTTCCCAAACACTGCCTT+AGG 0.467391 8_2:+44178390 None:intergenic
TATGTTGAAATATGATTAGC+TGG 0.468242 8_2:-44169981 Msa1249510:three_prime_UTR
CGAGTAAAAGATATGAATGA+TGG 0.469620 8_2:+44170138 None:intergenic
GTTTCAACAATGGATATTGA+AGG 0.473115 8_2:-44178069 Msa1249510:CDS
ATACTCTCTGCAGCAGCCAT+TGG 0.479249 8_2:+44178156 None:intergenic
TGCAGAGAGTATGGTGGAAC+TGG 0.481978 8_2:-44178145 Msa1249510:CDS
TGAAAGTATATGGCTTCATA+TGG 0.483697 8_2:-44172627 Msa1249510:CDS
AAGGCTCTGTCAATTATGCT+TGG 0.485127 8_2:-44172562 Msa1249510:CDS
TTTCTCTGAATTATTAGCTA+AGG 0.490717 8_2:+44178207 None:intergenic
AAAACATACCTTGGATATGT+AGG 0.492840 8_2:+44172530 None:intergenic
GAAATTAGCCCAATGTGGCC+TGG 0.495986 8_2:-44177985 Msa1249510:intron
ACACATGTAGCATACCAATA+GGG 0.502757 8_2:+44172816 None:intergenic
GTGTTTCATCTGTGATTCCT+GGG 0.503605 8_2:-44178017 Msa1249510:CDS
AATATCCTAAGGCAGTGTTT+GGG 0.511845 8_2:-44178395 Msa1249510:five_prime_UTR
GTGGCAAGGGCTCTTCGTCC+AGG 0.512123 8_2:-44172671 Msa1249510:CDS
TATTGAAGGTGGTGGTGATA+AGG 0.522203 8_2:-44178055 Msa1249510:CDS
ATGAGTGATCATTTCTTGGT+AGG 0.523282 8_2:+44174084 None:intergenic
TGAGTGCACATAACTCCTCC+TGG 0.525919 8_2:+44172653 None:intergenic
CAAACATCCAGTGAATCCTA+TGG 0.529311 8_2:-44170532 Msa1249510:CDS
TAAACCCTACTGCAACTTCA+GGG 0.530870 8_2:+44173217 None:intergenic
GCTTCATATGGATATAATTG+AGG 0.531349 8_2:-44172615 Msa1249510:CDS
TGGGGTTTCGGTTTCAACAA+TGG 0.533885 8_2:-44178079 Msa1249510:CDS
TATGGGTGAGACTAGTGGAA+TGG 0.538921 8_2:+44178307 None:intergenic
ATATCCTTAAGGTCCTGCTC+AGG 0.540360 8_2:-44172723 Msa1249510:intron
GAGTTATTCAGCTCACAGAA+AGG 0.548553 8_2:-44174117 Msa1249510:CDS
ATCTTCCTCTTCGCAAATGA+CGG 0.551524 8_2:+44170224 None:intergenic
TTAGGCACCGACTTATTCCA+TGG 0.563264 8_2:+44170095 None:intergenic
CTCGATTGGTCATCTATCAA+CGG 0.564251 8_2:-44170119 Msa1249510:three_prime_UTR
AGTTATTCAGCTCACAGAAA+GGG 0.568813 8_2:-44174116 Msa1249510:CDS
GCAGTCATCAACATATGGCA+AGG 0.573215 8_2:-44174155 Msa1249510:intron
TGCATAATACTAATATCCTA+AGG 0.573538 8_2:-44178406 Msa1249510:five_prime_UTR
GGTGGTGATAAGGACCCAAA+TGG 0.579962 8_2:-44178045 Msa1249510:CDS
TGTTGTATGGGTGAGACTAG+TGG 0.594687 8_2:+44178302 None:intergenic
TTTATGCTTTGCTCAACCGA+CGG 0.595624 8_2:-44170570 Msa1249510:CDS
GAAATCAACAAGAGGTCCGT+CGG 0.602495 8_2:+44170554 None:intergenic
GTTTGCCGTCATTTGCGAAG+AGG 0.603922 8_2:-44170229 Msa1249510:CDS
GATAAGGACCCAAATGGTAA+TGG 0.604632 8_2:-44178039 Msa1249510:CDS
AGCTAATCATATTTCAACAT+AGG 0.609545 8_2:+44169983 None:intergenic
TCAGAGTTGTAAAATTTGAG+TGG 0.611670 8_2:+44170480 None:intergenic
AGCAATGTGATTGAAAGTCT+AGG 0.613591 8_2:-44169784 Msa1249510:three_prime_UTR
CCACGTGTGACTCTTCGCAT+TGG 0.620602 8_2:-44173189 Msa1249510:CDS
GTGACTCTTCGCATTGGTGA+TGG 0.620618 8_2:-44173183 Msa1249510:intron
AGGAGGAGTTATGTGCACTC+AGG 0.621343 8_2:-44172651 Msa1249510:CDS
AAGCATTCAAGACACGCCAC+AGG 0.623562 8_2:+44169856 None:intergenic
TCAACAATGGATATTGAAGG+TGG 0.625049 8_2:-44178066 Msa1249510:CDS
GGTGCCTAAATTTGATGTCG+AGG 0.627591 8_2:-44170081 Msa1249510:three_prime_UTR
AGAGCTCAAAGTAGCTCATG+TGG 0.628171 8_2:-44170171 Msa1249510:three_prime_UTR
CAACGGACCATGGAATAAGT+CGG 0.630265 8_2:-44170102 Msa1249510:three_prime_UTR
TAATCATATTTCAACATAGG+TGG 0.634352 8_2:+44169986 None:intergenic
CTACAGTTCCTACATATCCA+AGG 0.636790 8_2:-44172538 Msa1249510:intron
GGTCATCTATCAACGGACCA+TGG 0.641202 8_2:-44170112 Msa1249510:three_prime_UTR
GTCAGATTACCAGAAAGTCA+TGG 0.643976 8_2:-44174283 Msa1249510:CDS
AATGACGTGCTACTTCTCGC+AGG 0.646893 8_2:+44173633 None:intergenic
TGATGAAGAAGAGAATAATG+GGG 0.651157 8_2:-44178097 Msa1249510:CDS
GTGAGACTAGTGGAATGGAA+AGG 0.652688 8_2:+44178312 None:intergenic
TTTCATCTGTGATTCCTGGG+TGG 0.656590 8_2:-44178014 Msa1249510:CDS
GCAAGGGCTCTTCGTCCAGG+AGG 0.657812 8_2:-44172668 Msa1249510:CDS
GGATGTTTGAAATCAACAAG+AGG 0.663795 8_2:+44170546 None:intergenic
TTTCTGAAATTAGCCCAATG+TGG 0.666459 8_2:-44177990 Msa1249510:CDS
GGCTCAGAAATAGAGCAAAG+AGG 0.682943 8_2:+44174058 None:intergenic
CTAATTTCAGAAAACCACCC+AGG 0.684797 8_2:+44178000 None:intergenic
CCAATGCGAAGAGTCACACG+TGG 0.691967 8_2:+44173189 None:intergenic
ACAATGGATATTGAAGGTGG+TGG 0.693735 8_2:-44178063 Msa1249510:CDS
GGCTGCTGCAGAGAGTATGG+TGG 0.698354 8_2:-44178151 Msa1249510:CDS
CAATGCGAAGAGTCACACGT+GGG 0.781444 8_2:+44173190 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG + chr8_2:44172843-44172862 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr8_2:44172844-44172863 None:intergenic 0.0%
!!! TTTGTTTTTTTGTTTTTTTT+TGG + chr8_2:44173499-44173518 None:intergenic 10.0%
!! TTGAAATTTAAAAAACTTAT+AGG - chr8_2:44173713-44173732 Msa1249510:intron 10.0%
!! AAATTGGAAAAAAATAAATA+GGG + chr8_2:44174879-44174898 None:intergenic 10.0%
!! AAAATTGGAAAAAAATAAAT+AGG + chr8_2:44174880-44174899 None:intergenic 10.0%
!! AATTTAAACACAAATATTTA+AGG + chr8_2:44175065-44175084 None:intergenic 10.0%
!!! AGTTAATATTTATTTTTTGA+AGG + chr8_2:44176809-44176828 None:intergenic 10.0%
!!! TTTTATGATTGAGAAATTAT+TGG + chr8_2:44169950-44169969 None:intergenic 15.0%
!! ATAATTCAGAGAAAAAAAAA+AGG - chr8_2:44169999-44170018 Msa1249510:three_prime_UTR 15.0%
!!! TTTTTTTTTTTTTCTTCCAA+TGG - chr8_2:44170025-44170044 Msa1249510:three_prime_UTR 15.0%
!! CATTCATTAGATATAATAAA+CGG - chr8_2:44171187-44171206 Msa1249510:intron 15.0%
!! TAAATTAAAACATAACATCA+TGG - chr8_2:44171582-44171601 Msa1249510:intron 15.0%
!! AGTTAACTAATTTGAATATT+TGG + chr8_2:44172451-44172470 None:intergenic 15.0%
!! TATTCAAATTAGTTAACTAT+AGG - chr8_2:44172453-44172472 Msa1249510:intron 15.0%
!! ATTCAAATTAGTTAACTATA+GGG - chr8_2:44172454-44172473 Msa1249510:intron 15.0%
!! TAAGTCGTTTATTATATTTA+AGG - chr8_2:44172760-44172779 Msa1249510:intron 15.0%
!! AAGTCGTTTATTATATTTAA+GGG - chr8_2:44172761-44172780 Msa1249510:intron 15.0%
!! TAATCAAGAATCAAAATTAA+AGG + chr8_2:44173048-44173067 None:intergenic 15.0%
!!! TTTTTTGTTTTTTTTTGGAT+TGG + chr8_2:44173494-44173513 None:intergenic 15.0%
!!! TAAGTTTTTAAGTTTCAAAA+AGG + chr8_2:44173586-44173605 None:intergenic 15.0%
!!! GTTTTTTATAAGTTTCTAAT+AGG + chr8_2:44173650-44173669 None:intergenic 15.0%
!! GAAACTTATAAAAAACTTAA+AGG - chr8_2:44173654-44173673 Msa1249510:CDS 15.0%
!!! TCTTGTAAAAAAAAGTATAT+TGG - chr8_2:44174216-44174235 Msa1249510:intron 15.0%
!!! CTTGTAAAAAAAAGTATATT+GGG - chr8_2:44174217-44174236 Msa1249510:intron 15.0%
!!! TTAGTCAATATTTTATATTG+CGG + chr8_2:44174808-44174827 None:intergenic 15.0%
!!! GTAGTTATTTTAAATTCATT+CGG - chr8_2:44175843-44175862 Msa1249510:intron 15.0%
!! AAATTTAGTATCCAAAAAAA+TGG - chr8_2:44176024-44176043 Msa1249510:intron 15.0%
!! AAACACAAAAAACAATAAAA+AGG + chr8_2:44177469-44177488 None:intergenic 15.0%
!!! TTTCATTTTTTTGTTATAGT+GGG - chr8_2:44177595-44177614 Msa1249510:intron 15.0%
!!! AATTATTGTGTTTAACTTGT+TGG - chr8_2:44170471-44170490 Msa1249510:intron 20.0%
!! CTTATTGTGTTTAAACTTAT+TGG - chr8_2:44170655-44170674 Msa1249510:intron 20.0%
!!! AATTTGTTTAAAATCCACTA+CGG - chr8_2:44171084-44171103 Msa1249510:intron 20.0%
!! ATCTAATGAATGTAAACAAT+AGG + chr8_2:44171179-44171198 None:intergenic 20.0%
!! TACATAAAAAATATAAGTCG+TGG - chr8_2:44171223-44171242 Msa1249510:intron 20.0%
!! ACATAAAAAATATAAGTCGT+GGG - chr8_2:44171224-44171243 Msa1249510:intron 20.0%
!!! TCATTTTAATTGTGAAATTG+CGG + chr8_2:44171473-44171492 None:intergenic 20.0%
!! CAAGTAATAAAAATAACACA+AGG + chr8_2:44171773-44171792 None:intergenic 20.0%
!! GAAAACAAGATTATAATAGA+AGG - chr8_2:44172277-44172296 Msa1249510:intron 20.0%
!! AATAAAAGAAAAAGTAGGAA+AGG + chr8_2:44172315-44172334 None:intergenic 20.0%
!! TGATCAATAAAAGAAAAAGT+AGG + chr8_2:44172320-44172339 None:intergenic 20.0%
!!! ATTTGGAGATTTAATTTTGT+TGG - chr8_2:44172366-44172385 Msa1249510:intron 20.0%
!! AGATTGATGCAAATATATAT+AGG + chr8_2:44172416-44172435 None:intergenic 20.0%
!! TTCAAATTAGTTAACTATAG+GGG - chr8_2:44172455-44172474 Msa1249510:intron 20.0%
!! AACAAAAGTCAAATATAGTT+GGG + chr8_2:44172495-44172514 None:intergenic 20.0%
!! AAACAAAAGTCAAATATAGT+TGG + chr8_2:44172496-44172515 None:intergenic 20.0%
!!! ACTATATTTGACTTTTGTTT+AGG - chr8_2:44172496-44172515 Msa1249510:intron 20.0%
!!! TCTTGATTATTTTGCATAAA+TGG - chr8_2:44173059-44173078 Msa1249510:intron 20.0%
!!! CTTGATTATTTTGCATAAAT+GGG - chr8_2:44173060-44173079 Msa1249510:intron 20.0%
!! CCTTTCTATATATTTATTAC+AGG + chr8_2:44173089-44173108 None:intergenic 20.0%
!! CCTGTAATAAATATATAGAA+AGG - chr8_2:44173086-44173105 Msa1249510:intron 20.0%
!! CAAACAAAAGAATATTTGAT+TGG + chr8_2:44173346-44173365 None:intergenic 20.0%
!!! ATATATTTGAGTTCATCTTA+TGG - chr8_2:44173465-44173484 Msa1249510:intron 20.0%
!! GCATTAAATTAACAACTTAA+AGG - chr8_2:44173623-44173642 Msa1249510:CDS 20.0%
!!! TTTTAAGTTTGACAAAATAC+CGG + chr8_2:44173745-44173764 None:intergenic 20.0%
!!! ACCAAGTTTATTTTGATAAA+AGG + chr8_2:44173788-44173807 None:intergenic 20.0%
!!! ATCAAAATAAACTTGGTTTT+TGG - chr8_2:44173791-44173810 Msa1249510:intron 20.0%
!!! ATAGAAAAGATTTTGTTTCA+AGG - chr8_2:44173888-44173907 Msa1249510:intron 20.0%
!!! TAATTTTCTGTTTTAGGTTT+TGG - chr8_2:44174516-44174535 Msa1249510:intron 20.0%
!! AAAACAAGTTTATATCACTA+AGG + chr8_2:44175428-44175447 None:intergenic 20.0%
!! CATTACATTTAATATCCTTA+AGG - chr8_2:44175463-44175482 Msa1249510:intron 20.0%
!! TATATTACAAAAACATACCT+TGG + chr8_2:44175679-44175698 None:intergenic 20.0%
!!! TTCTTAGAATCTAAAACAAA+CGG + chr8_2:44175762-44175781 None:intergenic 20.0%
!!! TGTTTTAGATTCTAAGAAAA+TGG - chr8_2:44175764-44175783 Msa1249510:intron 20.0%
!! ATTCGGTATAAGTTAAAAAA+GGG - chr8_2:44175860-44175879 Msa1249510:intron 20.0%
!!! ATTTTTTTAATAACGTATCG+AGG + chr8_2:44176241-44176260 None:intergenic 20.0%
!!! TATATTCTATCTAATTTGTG+CGG + chr8_2:44176375-44176394 None:intergenic 20.0%
!! TCTTCTAACCTAAAAAAATA+GGG + chr8_2:44176617-44176636 None:intergenic 20.0%
!!! AATATGTAAGACAAAAGTAT+AGG - chr8_2:44176714-44176733 Msa1249510:intron 20.0%
!! AAATGAAAGAAATATTACGA+TGG + chr8_2:44177583-44177602 None:intergenic 20.0%
!!! CTTTCATTTTTTTGTTATAG+TGG - chr8_2:44177594-44177613 Msa1249510:intron 20.0%
!!! NNATTCTTATCTTCATCTTT+TGG - chr8_2:44177892-44177911 Msa1249510:intron 20.0%
! TGCATAATACTAATATCCTA+AGG - chr8_2:44169791-44169810 Msa1249510:three_prime_UTR 25.0%
! GGAATAGAATAAAGGAAAAA+GGG + chr8_2:44169921-44169940 None:intergenic 25.0%
! TGGAATAGAATAAAGGAAAA+AGG + chr8_2:44169922-44169941 None:intergenic 25.0%
! TTGAGAAATTATTGGAGAAA+TGG + chr8_2:44169942-44169961 None:intergenic 25.0%
! TTTCTCTGAATTATTAGCTA+AGG + chr8_2:44169993-44170012 None:intergenic 25.0%
! ATTCAGAGAAAAAAAAAAGG+AGG - chr8_2:44170002-44170021 Msa1249510:three_prime_UTR 25.0%
! ATGATGAAGAAGAGAATAAT+GGG - chr8_2:44170099-44170118 Msa1249510:three_prime_UTR 25.0%
! AGAAAAGAAAAAAACTAACC+AGG + chr8_2:44170233-44170252 None:intergenic 25.0%
! TTTATAACCAACATGCAAAA+GGG + chr8_2:44170266-44170285 None:intergenic 25.0%
!! TTTTATAACCAACATGCAAA+AGG + chr8_2:44170267-44170286 None:intergenic 25.0%
! AACTAACTAAACACACAAAA+AGG + chr8_2:44170296-44170315 None:intergenic 25.0%
!!! TTTGTGTTTTTGTTTGGTTA+TGG - chr8_2:44170494-44170513 Msa1249510:CDS 25.0%
! TTATGTTTAGTTATGTGTAG+CGG - chr8_2:44170535-44170554 Msa1249510:CDS 25.0%
!!! TATTGGTTTGTGTTTTTGTA+AGG - chr8_2:44170672-44170691 Msa1249510:intron 25.0%
!!! TTTGTGTTTTTGTAAGGTTA+TGG - chr8_2:44170678-44170697 Msa1249510:intron 25.0%
!!! ATGGAAAACTTAACTTGTAT+TGG - chr8_2:44170697-44170716 Msa1249510:intron 25.0%
!!! TTAACTTGTATTGGTTAATG+TGG - chr8_2:44170706-44170725 Msa1249510:intron 25.0%
! TTGATTCAATACATGTATGT+AGG + chr8_2:44170917-44170936 None:intergenic 25.0%
!! TGAATCAAGCTTTTCATTAA+TGG - chr8_2:44170929-44170948 Msa1249510:intron 25.0%
! TGTAGAAGAATTTGAACAAA+CGG + chr8_2:44170997-44171016 None:intergenic 25.0%
! TTGTCAAATAGTATCTACAT+CGG + chr8_2:44171117-44171136 None:intergenic 25.0%
! ATGTTCTCTACTTTATCTAA+TGG + chr8_2:44172092-44172111 None:intergenic 25.0%
!!! AATCTATTTTTTTGTGCACA+AGG + chr8_2:44171421-44171440 None:intergenic 25.0%
! TCACAATTAAAATGAGTATG+AGG - chr8_2:44171478-44171497 Msa1249510:intron 25.0%
! TAAAACATAACATCATGGAA+AGG - chr8_2:44171587-44171606 Msa1249510:intron 25.0%
!! AAGGATTTCATTTAGAATTG+AGG - chr8_2:44171606-44171625 Msa1249510:intron 25.0%
! TAAAATTATTCACAGATCGA+TGG + chr8_2:44171800-44171819 None:intergenic 25.0%
! ATGTTCTCTACTTTATCTAA+TGG - chr8_2:44172092-44172111 Msa1249510:intron 25.0%
! ACAAGATTATAATAGAAGGA+AGG - chr8_2:44172281-44172300 Msa1249510:intron 25.0%
!! TTCTTTTATTGATCAGCAAT+AGG - chr8_2:44172325-44172344 Msa1249510:intron 25.0%
!! TATTTGCATCAATCTTTTGA+AGG - chr8_2:44172421-44172440 Msa1249510:intron 25.0%
!!! TTGACTTTTGTTTAGGAATT+AGG - chr8_2:44172503-44172522 Msa1249510:intron 25.0%
! TATCAATGATCTTAACTCTT+TGG - chr8_2:44172989-44173008 Msa1249510:intron 25.0%
! ATCAATGATCTTAACTCTTT+GGG - chr8_2:44172990-44173009 Msa1249510:intron 25.0%
!! TTATATGTTTTACCAATCGT+AGG - chr8_2:44173377-44173396 Msa1249510:intron 25.0%
! GAACTCAAATATATTCATTG+CGG + chr8_2:44173459-44173478 None:intergenic 25.0%
!! TAGTCCTTTAAGTTTCAAAT+AGG - chr8_2:44173539-44173558 Msa1249510:intron 25.0%
! AATTTGTCCAACTTTCAAAT+AGG + chr8_2:44173681-44173700 None:intergenic 25.0%
! AAAAACTTATAGGATTAACC+CGG - chr8_2:44173723-44173742 Msa1249510:intron 25.0%
!! TTTAAGTTTGACAAAATACC+GGG + chr8_2:44173744-44173763 None:intergenic 25.0%
!! GGTATTTTGTCAAACTTAAA+AGG - chr8_2:44173744-44173763 Msa1249510:intron 25.0%
!! GCCTTTTATCAAAATAAACT+TGG - chr8_2:44173784-44173803 Msa1249510:intron 25.0%
! AAAACTCATGAATTAAACTC+TGG - chr8_2:44173831-44173850 Msa1249510:intron 25.0%
!! CAAAATCTTTTCTATCTTCA+AGG + chr8_2:44173883-44173902 None:intergenic 25.0%
!! GAAGTATAAATGACCTTTTT+GGG + chr8_2:44174163-44174182 None:intergenic 25.0%
!!! AGAAGTATAAATGACCTTTT+TGG + chr8_2:44174164-44174183 None:intergenic 25.0%
! ATGGAAATTGCTTATGAAAA+CGG - chr8_2:44174309-44174328 Msa1249510:CDS 25.0%
!! TCACTGTAATTTTCTGTTTT+AGG - chr8_2:44174510-44174529 Msa1249510:intron 25.0%
! CATTTGTGAAATTGACAATA+TGG - chr8_2:44174606-44174625 Msa1249510:intron 25.0%
!! CAGGATAATAAAATTTTGTG+TGG + chr8_2:44174649-44174668 None:intergenic 25.0%
!! AAAATCATGTTACTTAGCTT+AGG + chr8_2:44174687-44174706 None:intergenic 25.0%
!! TATTGACTAAATTATCTTGC+TGG - chr8_2:44174818-44174837 Msa1249510:intron 25.0%
! ATTGACTAAATTATCTTGCT+GGG - chr8_2:44174819-44174838 Msa1249510:intron 25.0%
! TTAAGGAAACATATTAGTGT+AGG + chr8_2:44175048-44175067 None:intergenic 25.0%
! GTAAAAAATCTTTACACTGA+CGG - chr8_2:44175210-44175229 Msa1249510:intron 25.0%
!! TCTTAGAATCTAAAACAAAC+GGG + chr8_2:44175761-44175780 None:intergenic 25.0%
! CATTCGGTATAAGTTAAAAA+AGG - chr8_2:44175859-44175878 Msa1249510:intron 25.0%
! CTCTTCTAACCTAAAAAAAT+AGG + chr8_2:44176618-44176637 None:intergenic 25.0%
! AAGAAATAAAACTACAAGTC+TGG + chr8_2:44176664-44176683 None:intergenic 25.0%
! AAAAATCCATGATATAAGCA+CGG - chr8_2:44177056-44177075 Msa1249510:intron 25.0%
!! TTAATTTCATATGACCGTTT+TGG + chr8_2:44177213-44177232 None:intergenic 25.0%
! GTTATAGAATTAATGCATAG+CGG + chr8_2:44177313-44177332 None:intergenic 25.0%
!!! AGAAGTTCTGAAAAGAAAAA+GGG + chr8_2:44177773-44177792 None:intergenic 25.0%
!!! TAGAAGTTCTGAAAAGAAAA+AGG + chr8_2:44177774-44177793 None:intergenic 25.0%
!! ATTCATATCTTTTACTCGAT+TGG - chr8_2:44178064-44178083 Msa1249510:CDS 25.0%
! TAATCATATTTCAACATAGG+TGG + chr8_2:44178214-44178233 None:intergenic 25.0%
! AGCTAATCATATTTCAACAT+AGG + chr8_2:44178217-44178236 None:intergenic 25.0%
! TATGTTGAAATATGATTAGC+TGG - chr8_2:44178216-44178235 Msa1249510:five_prime_UTR 25.0%
!!! GGGTTTTGATTGGTTTTAAT+GGG + chr8_2:44169830-44169849 None:intergenic 30.0%
!!! TGGGTTTTGATTGGTTTTAA+TGG + chr8_2:44169831-44169850 None:intergenic 30.0%
GGAGAAATGGAATAGAATAA+AGG + chr8_2:44169929-44169948 None:intergenic 30.0%
! ATCATCTTTTTGTCTCTTCA+TGG + chr8_2:44170084-44170103 None:intergenic 30.0%
GATGATGAAGAAGAGAATAA+TGG - chr8_2:44170098-44170117 Msa1249510:three_prime_UTR 30.0%
TGATGAAGAAGAGAATAATG+GGG - chr8_2:44170100-44170119 Msa1249510:three_prime_UTR 30.0%
GTTTCAACAATGGATATTGA+AGG - chr8_2:44170128-44170147 Msa1249510:three_prime_UTR 30.0%
ATGAAACACCATTACCATTT+GGG + chr8_2:44170169-44170188 None:intergenic 30.0%
!!! TGTTGGTTTGTGTTTTTGTT+TGG - chr8_2:44170488-44170507 Msa1249510:CDS 30.0%
CTTTATATTGAAGACATGTC+TGG - chr8_2:44170569-44170588 Msa1249510:CDS 30.0%
TATATGTGTCAGTGATTCAT+AGG - chr8_2:44170612-44170631 Msa1249510:intron 30.0%
! TTTGGATTTGGTTATCTGTT+TGG - chr8_2:44170751-44170770 Msa1249510:intron 30.0%
TGGAAAATTTGACAGAAACA+AGG + chr8_2:44170802-44170821 None:intergenic 30.0%
ATTTACAGTGTTGTAATTCG+TGG - chr8_2:44170957-44170976 Msa1249510:intron 30.0%
GTAAACAATAGGCATATATC+AGG + chr8_2:44171168-44171187 None:intergenic 30.0%
TAAAAAATATAAGTCGTGGG+TGG - chr8_2:44171227-44171246 Msa1249510:intron 30.0%
AAAAAATATAAGTCGTGGGT+GGG - chr8_2:44171228-44171247 Msa1249510:intron 30.0%
! AATTTTGTCCCTGTAGAAAA+GGG + chr8_2:44171513-44171532 None:intergenic 30.0%
! AAATTTTGTCCCTGTAGAAA+AGG + chr8_2:44171514-44171533 None:intergenic 30.0%
! TACAGGGACAAAATTTTCTT+GGG - chr8_2:44171518-44171537 Msa1249510:intron 30.0%
AATAAAGAGAGAGAAATCCA+TGG + chr8_2:44171724-44171743 None:intergenic 30.0%
!!! TTTATTTTGCGATCCGTTTT+GGG - chr8_2:44171738-44171757 Msa1249510:intron 30.0%
AAGAAAAAACAAGCCAAGAA+TGG + chr8_2:44171929-44171948 None:intergenic 30.0%
AGACAAAAGTGGAAACAATT+TGG + chr8_2:44172197-44172216 None:intergenic 30.0%
TAATTTACACCATGGAAGAA+AGG + chr8_2:44172245-44172264 None:intergenic 30.0%
! CTAAGCTTTAATTTACACCA+TGG + chr8_2:44172253-44172272 None:intergenic 30.0%
AAAGAAAAAGTAGGAAAGGT+TGG + chr8_2:44172311-44172330 None:intergenic 30.0%
TTCACAACTTGGAATTGATT+TGG - chr8_2:44172349-44172368 Msa1249510:intron 30.0%
TTTGTTTAGGAATTAGGACT+AGG - chr8_2:44172509-44172528 Msa1249510:intron 30.0%
! TGAAATACGGATTTGAAACA+AGG - chr8_2:44172564-44172583 Msa1249510:CDS 30.0%
! GAAATACGGATTTGAAACAA+GGG - chr8_2:44172565-44172584 Msa1249510:CDS 30.0%
!! GATTATTTTGCATAAATGGG+CGG - chr8_2:44173063-44173082 Msa1249510:intron 30.0%
AACACTTTCAACGTTTACAT+AGG - chr8_2:44173123-44173142 Msa1249510:intron 30.0%
AATTCAAAGCAATCTTTGCA+AGG + chr8_2:44173190-44173209 None:intergenic 30.0%
AGAGAGGTTCAATGATAAAA+GGG + chr8_2:44173214-44173233 None:intergenic 30.0%
TAGAGAGGTTCAATGATAAA+AGG + chr8_2:44173215-44173234 None:intergenic 30.0%
!!! CTCTGGAAGTATTTTTTACT+GGG - chr8_2:44173244-44173263 Msa1249510:intron 30.0%
! AGGACCTATTTGAAACTTAA+AGG + chr8_2:44173546-44173565 None:intergenic 30.0%
TTTCAAAAAGGTCCTTCAAA+GGG + chr8_2:44173574-44173593 None:intergenic 30.0%
TAAAGGACCTATTTGAAAGT+TGG - chr8_2:44173671-44173690 Msa1249510:intron 30.0%
! AAAAGGCAAAATGTCTCTTT+TGG + chr8_2:44173771-44173790 None:intergenic 30.0%
ATATAGACATAAGTCCAGTT+TGG + chr8_2:44174424-44174443 None:intergenic 30.0%
!!! CTGTTTTAGGTTTTGGTTAT+TGG - chr8_2:44174523-44174542 Msa1249510:intron 30.0%
!!! TTTTAGGTTTTGGTTATTGG+TGG - chr8_2:44174526-44174545 Msa1249510:intron 30.0%
! AATATTTTATATTGCGGTCC+TGG + chr8_2:44174802-44174821 None:intergenic 30.0%
! TCCAATTTTTCTTGATTGCT+CGG - chr8_2:44174891-44174910 Msa1249510:intron 30.0%
AACTTCAGGGAAAAATTGTT+TGG + chr8_2:44174970-44174989 None:intergenic 30.0%
ATAAATATGACTTCTCAACG+AGG + chr8_2:44175267-44175286 None:intergenic 30.0%
ATTGTGAGAAAAGTCATCAT+GGG + chr8_2:44175290-44175309 None:intergenic 30.0%
AACTTATGATGCAGTTATAG+TGG - chr8_2:44175348-44175367 Msa1249510:intron 30.0%
! TGAAAGTATATGGCTTCATA+TGG - chr8_2:44175570-44175589 Msa1249510:intron 30.0%
GCTTCATATGGATATAATTG+AGG - chr8_2:44175582-44175601 Msa1249510:intron 30.0%
TTTGAAAATCTGACGACAAT+TGG + chr8_2:44175617-44175636 None:intergenic 30.0%
! AATTGTCGTCAGATTTTCAA+AGG - chr8_2:44175616-44175635 Msa1249510:intron 30.0%
AAAACATACCTTGGATATGT+AGG + chr8_2:44175670-44175689 None:intergenic 30.0%
CTATTTGTGAAGAGAAATCT+TGG - chr8_2:44175703-44175722 Msa1249510:intron 30.0%
TATTTGCAAAGATTTGCAAG+AGG + chr8_2:44176096-44176115 None:intergenic 30.0%
AAGATAAGATTGTCCACAAT+AGG - chr8_2:44176117-44176136 Msa1249510:intron 30.0%
TTCATAGATAACACCTATTG+TGG + chr8_2:44176133-44176152 None:intergenic 30.0%
TAGAATTCAATCAGTGGTAA+TGG - chr8_2:44176551-44176570 Msa1249510:intron 30.0%
!!! ACGAGAAACCCTATTTTTTT+AGG - chr8_2:44176606-44176625 Msa1249510:intron 30.0%
! TAAGACAAAAGTATAGGTGT+CGG - chr8_2:44176720-44176739 Msa1249510:intron 30.0%
AAAAAATGACTGATACGTGT+CGG + chr8_2:44176785-44176804 None:intergenic 30.0%
! ATACGATACTTCACCATTTT+TGG - chr8_2:44176976-44176995 Msa1249510:intron 30.0%
! GTGCTTATATCATGGATTTT+TGG + chr8_2:44177057-44177076 None:intergenic 30.0%
TTGTCAAATACCACCATTTA+TGG + chr8_2:44177167-44177186 None:intergenic 30.0%
! TAACATACCCTTTTCCAAAA+CGG - chr8_2:44177196-44177215 Msa1249510:intron 30.0%
!! TGCATTGGAATTTTGTTTGA+GGG + chr8_2:44177240-44177259 None:intergenic 30.0%
!! TTGCATTGGAATTTTGTTTG+AGG + chr8_2:44177241-44177260 None:intergenic 30.0%
AACAATAAAAAGGCAACAAG+AGG + chr8_2:44177459-44177478 None:intergenic 30.0%
! TTTTTGTGTTTACTTCCTCT+AGG - chr8_2:44177478-44177497 Msa1249510:intron 30.0%
!! TTTTGTTATAGTGGGATGAT+TGG - chr8_2:44177603-44177622 Msa1249510:intron 30.0%
TCAGAGTTGTAAAATTTGAG+TGG + chr8_2:44177720-44177739 None:intergenic 30.0%
! ACTCAAATTTTACAACTCTG+AGG - chr8_2:44177719-44177738 Msa1249510:intron 30.0%
! TGAATCATCTCAGTTTTCTT+TGG + chr8_2:44178004-44178023 None:intergenic 30.0%
CGAGTAAAAGATATGAATGA+TGG + chr8_2:44178062-44178081 None:intergenic 30.0%
! GATTGAGATGCATTCTTTTA+TGG - chr8_2:44178312-44178331 Msa1249510:five_prime_UTR 30.0%
! TTGAATGCTTTTGGTATCTT+AGG - chr8_2:44178354-44178373 Msa1249510:five_prime_UTR 30.0%
GTATCTTAGGTTCTTTGATT+TGG - chr8_2:44178367-44178386 Msa1249510:five_prime_UTR 30.0%
TAATATCCTAAGGCAGTGTT+TGG - chr8_2:44169801-44169820 Msa1249510:three_prime_UTR 35.0%
AATATCCTAAGGCAGTGTTT+GGG - chr8_2:44169802-44169821 Msa1249510:three_prime_UTR 35.0%
!! GATTCGATTTTGAGAAAGGT+GGG + chr8_2:44169850-44169869 None:intergenic 35.0%
!! GATGGATTCGATTTTGAGAA+AGG + chr8_2:44169854-44169873 None:intergenic 35.0%
!! AAGGAAAAAGGGTGTTGTAT+GGG + chr8_2:44169910-44169929 None:intergenic 35.0%
!! AAAGGAAAAAGGGTGTTGTA+TGG + chr8_2:44169911-44169930 None:intergenic 35.0%
TTATTAGCTAAGGCTCTGTT+TGG + chr8_2:44169983-44170002 None:intergenic 35.0%
! ATCTTTTTGTCTCTTCATGG+AGG + chr8_2:44170081-44170100 None:intergenic 35.0%
! AGAAGAGAATAATGGGGTTT+CGG - chr8_2:44170106-44170125 Msa1249510:three_prime_UTR 35.0%
TCAACAATGGATATTGAAGG+TGG - chr8_2:44170131-44170150 Msa1249510:three_prime_UTR 35.0%
GATGAAACACCATTACCATT+TGG + chr8_2:44170170-44170189 None:intergenic 35.0%
!! TTTCTGAAATTAGCCCAATG+TGG - chr8_2:44170207-44170226 Msa1249510:CDS 35.0%
! ACGTCTTCAATAAGAAGTGT+CGG + chr8_2:44170335-44170354 None:intergenic 35.0%
GTTGTTTACTGTGTTTGTGT+TGG - chr8_2:44170426-44170445 Msa1249510:intron 35.0%
!! TGTTTGTGTTGGTGATTCAT+TGG - chr8_2:44170437-44170456 Msa1249510:intron 35.0%
TGATTCATAGGTTTAGTTGC+TGG - chr8_2:44170624-44170643 Msa1249510:intron 35.0%
GATTCATAGGTTTAGTTGCT+GGG - chr8_2:44170625-44170644 Msa1249510:intron 35.0%
GAATTTGACATTGAGTGAAG+AGG - chr8_2:44170728-44170747 Msa1249510:intron 35.0%
AGAATCAGAGTGAAAAAAGG+TGG + chr8_2:44170822-44170841 None:intergenic 35.0%
TGCAGAATCAGAGTGAAAAA+AGG + chr8_2:44170825-44170844 None:intergenic 35.0%
TTCACTCTGATTCTGCAAAT+TGG - chr8_2:44170828-44170847 Msa1249510:intron 35.0%
TACATGCCAAGCAAATATCA+GGG + chr8_2:44170894-44170913 None:intergenic 35.0%
TTGCCAAATAACAGCAATTG+TGG + chr8_2:44171028-44171047 None:intergenic 35.0%
TGGGATTTAGTATGGGAAAA+GGG - chr8_2:44171247-44171266 Msa1249510:intron 35.0%
AAGATTAACTTTCCCATGGT+GGG + chr8_2:44172117-44172136 None:intergenic 35.0%
GTGAGTGTGAGAAAAAAATC+TGG + chr8_2:44171352-44171371 None:intergenic 35.0%
! TTTTTGTGCACAAGGTTTGA+AGG + chr8_2:44171413-44171432 None:intergenic 35.0%
TAATTGTGAAATTGCGGTGA+CGG + chr8_2:44171467-44171486 None:intergenic 35.0%
! ATTTTGTCCCTGTAGAAAAG+GGG + chr8_2:44171512-44171531 None:intergenic 35.0%
! CTACAGGGACAAAATTTTCT+TGG - chr8_2:44171517-44171536 Msa1249510:intron 35.0%
!! GAAATCCATGGATTGGATTT+GGG + chr8_2:44171712-44171731 None:intergenic 35.0%
!! AGAAATCCATGGATTGGATT+TGG + chr8_2:44171713-44171732 None:intergenic 35.0%
!!! CTTTATTTTGCGATCCGTTT+TGG - chr8_2:44171737-44171756 Msa1249510:intron 35.0%
AAGGATCCAAAATCCCAAAA+CGG + chr8_2:44171754-44171773 None:intergenic 35.0%
! TGTTGCTTAGCAAACATAAG+AGG - chr8_2:44171839-44171858 Msa1249510:intron 35.0%
CAGCATCAATGTGTTTAAAC+TGG - chr8_2:44171870-44171889 Msa1249510:intron 35.0%
!! AAGAAGACTCCTTAGTTTGT+TGG - chr8_2:44171893-44171912 Msa1249510:intron 35.0%
!! AGAAGACTCCTTAGTTTGTT+GGG - chr8_2:44171894-44171913 Msa1249510:intron 35.0%
TTGAAAAAGATCTGCAGACA+CGG - chr8_2:44171968-44171987 Msa1249510:intron 35.0%
AAGATTAACTTTCCCATGGT+GGG - chr8_2:44172117-44172136 Msa1249510:intron 35.0%
ACTTAGGTGGGATTTAGTAT+GGG + chr8_2:44172158-44172177 None:intergenic 35.0%
CAAAAGTGGAAACAATTTGG+TGG + chr8_2:44172194-44172213 None:intergenic 35.0%
TAGAAGCGATTCAAACGAAT+GGG + chr8_2:44172222-44172241 None:intergenic 35.0%
!! TGCATCAATCTTTTGAAGGT+TGG - chr8_2:44172425-44172444 Msa1249510:intron 35.0%
AAACCCATACAATGTTGAGA+CGG - chr8_2:44172541-44172560 Msa1249510:CDS 35.0%
AATGTTGAGACGGTGAAATA+CGG - chr8_2:44172551-44172570 Msa1249510:CDS 35.0%
TACATCACAGTGTTTAGATC+TGG - chr8_2:44172592-44172611 Msa1249510:CDS 35.0%
! TTTGTAGGTATTGCACAGAA+GGG - chr8_2:44172641-44172660 Msa1249510:CDS 35.0%
! ATATATATAGGGAGCGTATC+CGG + chr8_2:44172832-44172851 None:intergenic 35.0%
GTTTATTTGCAGTCACTGAA+AGG - chr8_2:44173150-44173169 Msa1249510:intron 35.0%
GAGAGGTTCAATGATAAAAG+GGG + chr8_2:44173213-44173232 None:intergenic 35.0%
!!! GCTCTGGAAGTATTTTTTAC+TGG - chr8_2:44173243-44173262 Msa1249510:intron 35.0%
AGTAGTAAACTAGACCGATT+GGG + chr8_2:44173404-44173423 None:intergenic 35.0%
TAGTAGTAAACTAGACCGAT+TGG + chr8_2:44173405-44173424 None:intergenic 35.0%
! AAAGGACTAACCTGGTATTT+TGG + chr8_2:44173528-44173547 None:intergenic 35.0%
TGAAACTTAAAGGACTAACC+TGG + chr8_2:44173536-44173555 None:intergenic 35.0%
GTTTCAAAAAGGTCCTTCAA+AGG + chr8_2:44173575-44173594 None:intergenic 35.0%
! CTTTTGCAGTCATCAACATA+TGG - chr8_2:44174037-44174056 Msa1249510:intron 35.0%
!! ATATGGCAAGGTTCTTGTTT+TGG - chr8_2:44174054-44174073 Msa1249510:CDS 35.0%
AGTTATTCAGCTCACAGAAA+GGG - chr8_2:44174081-44174100 Msa1249510:CDS 35.0%
ATGAGTGATCATTTCTTGGT+AGG + chr8_2:44174116-44174135 None:intergenic 35.0%
GAAGATGAGTGATCATTTCT+TGG + chr8_2:44174120-44174139 None:intergenic 35.0%
AGGCTGTTTGAGAAAACTTA+TGG - chr8_2:44174290-44174309 Msa1249510:CDS 35.0%
! GTTGAGTTGTTTATCCAAAC+TGG - chr8_2:44174407-44174426 Msa1249510:intron 35.0%
ATTATCCTGTCTCTAACCTA+AGG - chr8_2:44174660-44174679 Msa1249510:intron 35.0%
CATCAAATTGCAGACAAATG+AGG + chr8_2:44174750-44174769 None:intergenic 35.0%
ACCGAGCAATCAAGAAAAAT+TGG + chr8_2:44174895-44174914 None:intergenic 35.0%
!! CTTCTAAAGTCTCACATGAT+TGG + chr8_2:44175132-44175151 None:intergenic 35.0%
CATTGTGAGAAAAGTCATCA+TGG + chr8_2:44175291-44175310 None:intergenic 35.0%
! CATGATGACTTTTCTCACAA+TGG - chr8_2:44175289-44175308 Msa1249510:intron 35.0%
! TCTAGGAGTTGCATTTTTGA+AGG - chr8_2:44175312-44175331 Msa1249510:intron 35.0%
ACACATGTAGCATACCAATA+GGG + chr8_2:44175384-44175403 None:intergenic 35.0%
TACACATGTAGCATACCAAT+AGG + chr8_2:44175385-44175404 None:intergenic 35.0%
!!! AAAGCCATTTTTTCAGTCAG+TGG - chr8_2:44175507-44175526 Msa1249510:intron 35.0%
!!! ATTTTTTCAGTCAGTGGCAA+GGG - chr8_2:44175513-44175532 Msa1249510:intron 35.0%
ATCACATGTTCAAGTCATAG+AGG - chr8_2:44175734-44175753 Msa1249510:intron 35.0%
TCACATGTTCAAGTCATAGA+GGG - chr8_2:44175735-44175754 Msa1249510:intron 35.0%
!!! CCTATTGTGGACCATTTTTT+TGG + chr8_2:44176038-44176057 None:intergenic 35.0%
CCAAAAAAATGGTCCACAAT+AGG - chr8_2:44176035-44176054 Msa1249510:intron 35.0%
! TCCACAATAGGTGTTATCAA+TGG - chr8_2:44176047-44176066 Msa1249510:intron 35.0%
TCAAAATTCCCGATACGATA+CGG - chr8_2:44176215-44176234 Msa1249510:intron 35.0%
AGTACTTACGATGTTCTCTT+TGG + chr8_2:44176419-44176438 None:intergenic 35.0%
ACAGAGTAGAATTCAATCAG+TGG - chr8_2:44176545-44176564 Msa1249510:intron 35.0%
AGGGAATAGTTATTGCTATG+TGG - chr8_2:44176581-44176600 Msa1249510:intron 35.0%
!!! CTTCACCATTTTTGGAGTAT+CGG - chr8_2:44176984-44177003 Msa1249510:intron 35.0%
!!! TTCACCATTTTTGGAGTATC+GGG - chr8_2:44176985-44177004 Msa1249510:intron 35.0%
TGTTAGTGTGTTACATGCTA+TGG - chr8_2:44177079-44177098 Msa1249510:intron 35.0%
TACATGCTATGGCAGAAAAA+TGG - chr8_2:44177090-44177109 Msa1249510:intron 35.0%
AAAATCTGCCATGCCATAAA+TGG - chr8_2:44177151-44177170 Msa1249510:intron 35.0%
AAATACCACCATTTATGGCA+TGG + chr8_2:44177162-44177181 None:intergenic 35.0%
!!! CATATGACCGTTTTGGAAAA+GGG + chr8_2:44177206-44177225 None:intergenic 35.0%
!!! TCATATGACCGTTTTGGAAA+AGG + chr8_2:44177207-44177226 None:intergenic 35.0%
!! GCATTGGAATTTTGTTTGAG+GGG + chr8_2:44177239-44177258 None:intergenic 35.0%
! TTGACAACACTAGTTTGCAT+TGG + chr8_2:44177255-44177274 None:intergenic 35.0%
TTCAATGCAATACTAGTGCT+TGG - chr8_2:44177394-44177413 Msa1249510:intron 35.0%
!!! TACCACTCTTTTTTGTGTTG+AGG - chr8_2:44177536-44177555 Msa1249510:intron 35.0%
AACCTCAACACAAAAAAGAG+TGG + chr8_2:44177541-44177560 None:intergenic 35.0%
! GGATGTTTGAAATCAACAAG+AGG + chr8_2:44177654-44177673 None:intergenic 35.0%
! TTTTCATCCATAGGATTCAC+TGG + chr8_2:44177675-44177694 None:intergenic 35.0%
! TGACATTCGTTTTCATCCAT+AGG + chr8_2:44177684-44177703 None:intergenic 35.0%
AAAAAGGGAAATGCAGAAGA+TGG + chr8_2:44177758-44177777 None:intergenic 35.0%
! CAGTATGAATCTGGAATTGA+AGG + chr8_2:44177939-44177958 None:intergenic 35.0%
TACTCCTCGACATCAAATTT+AGG + chr8_2:44178123-44178142 None:intergenic 35.0%
GAGGAGTAACTGTTTATTTC+AGG - chr8_2:44178135-44178154 Msa1249510:CDS 35.0%
CAGGATAATGACAAAGTTGA+TGG - chr8_2:44178154-44178173 Msa1249510:CDS 35.0%
AGCAATGTGATTGAAAGTCT+AGG - chr8_2:44178413-44178432 Msa1249510:five_prime_UTR 35.0%
!! TGAGAAAGGTGGGTTTTGAT+TGG + chr8_2:44169840-44169859 None:intergenic 40.0%
!! GGATTCGATTTTGAGAAAGG+TGG + chr8_2:44169851-44169870 None:intergenic 40.0%
!! GGAAAGGAATCTGCTTTTGA+TGG + chr8_2:44169872-44169891 None:intergenic 40.0%
ACAATGGATATTGAAGGTGG+TGG - chr8_2:44170134-44170153 Msa1249510:three_prime_UTR 40.0%
! TATTGAAGGTGGTGGTGATA+AGG - chr8_2:44170142-44170161 Msa1249510:three_prime_UTR 40.0%
GATAAGGACCCAAATGGTAA+TGG - chr8_2:44170158-44170177 Msa1249510:three_prime_UTR 40.0%
GTGTTTCATCTGTGATTCCT+GGG - chr8_2:44170180-44170199 Msa1249510:three_prime_UTR 40.0%
CTAATTTCAGAAAACCACCC+AGG + chr8_2:44170200-44170219 None:intergenic 40.0%
AAAACTAACCAGGCCACATT+GGG + chr8_2:44170223-44170242 None:intergenic 40.0%
AAAAACTAACCAGGCCACAT+TGG + chr8_2:44170224-44170243 None:intergenic 40.0%
! CTCAATACCCTTTTGCATGT+TGG - chr8_2:44170256-44170275 Msa1249510:intron 40.0%
CTTCTTATTGAAGACGTGTC+TGG - chr8_2:44170338-44170357 Msa1249510:intron 40.0%
ATAGGTTTAGTTGCTGGGAA+AGG - chr8_2:44170630-44170649 Msa1249510:intron 40.0%
TGACATTGAGTGAAGAGGTT+TGG - chr8_2:44170733-44170752 Msa1249510:intron 40.0%
TGAGTGAAGAGGTTTGGATT+TGG - chr8_2:44170739-44170758 Msa1249510:intron 40.0%
CATGTTCCCTGATATTTGCT+TGG - chr8_2:44170885-44170904 Msa1249510:intron 40.0%
GTACATGCCAAGCAAATATC+AGG + chr8_2:44170895-44170914 None:intergenic 40.0%
! GTGCCACAATTGCTGTTATT+TGG - chr8_2:44171022-44171041 Msa1249510:intron 40.0%
GTGGGATTTAGTATGGGAAA+AGG - chr8_2:44171246-44171265 Msa1249510:intron 40.0%
CAAGATTAACTTTCCCATGG+TGG + chr8_2:44172116-44172135 None:intergenic 40.0%
GGTCAAGATTAACTTTCCCA+TGG + chr8_2:44172113-44172132 None:intergenic 40.0%
! TAGTAGATCCCCTTTTCTAC+AGG - chr8_2:44171501-44171520 Msa1249510:intron 40.0%
! AGTAGATCCCCTTTTCTACA+GGG - chr8_2:44171502-44171521 Msa1249510:intron 40.0%
TGCTTCTCTCTAATCTCTGA+AGG - chr8_2:44171660-44171679 Msa1249510:intron 40.0%
!! TGGGTGTGGTTTTTCAGTTT+GGG + chr8_2:44171693-44171712 None:intergenic 40.0%
!! TTGGGTGTGGTTTTTCAGTT+TGG + chr8_2:44171694-44171713 None:intergenic 40.0%
AGAGAGAGAAATCCATGGAT+TGG + chr8_2:44171719-44171738 None:intergenic 40.0%
!! GAAGACTCCTTAGTTTGTTG+GGG - chr8_2:44171895-44171914 Msa1249510:intron 40.0%
!! AAGACTCCTTAGTTTGTTGG+GGG - chr8_2:44171896-44171915 Msa1249510:intron 40.0%
TGAAAAAGATCTGCAGACAC+GGG - chr8_2:44171969-44171988 Msa1249510:intron 40.0%
GATTCAACAGCTACAACAGA+TGG - chr8_2:44172019-44172038 Msa1249510:intron 40.0%
GGTCAAGATTAACTTTCCCA+TGG - chr8_2:44172113-44172132 Msa1249510:intron 40.0%
CAAGATTAACTTTCCCATGG+TGG - chr8_2:44172116-44172135 Msa1249510:intron 40.0%
TGGGATTTAGTATGGGAAAG+GGG + chr8_2:44172151-44172170 None:intergenic 40.0%
GTGGGATTTAGTATGGGAAA+GGG + chr8_2:44171246-44171265 None:intergenic 40.0%
CACTTAGGTGGGATTTAGTA+TGG + chr8_2:44172159-44172178 None:intergenic 40.0%
CATACTAAATCCCACCTAAG+TGG - chr8_2:44172157-44172176 Msa1249510:intron 40.0%
! AGTGGAAACAATTTGGTGGA+GGG + chr8_2:44172190-44172209 None:intergenic 40.0%
! AAGTGGAAACAATTTGGTGG+AGG + chr8_2:44172191-44172210 None:intergenic 40.0%
AGAAGCGATTCAAACGAATG+GGG + chr8_2:44172221-44172240 None:intergenic 40.0%
GTAGAAGCGATTCAAACGAA+TGG + chr8_2:44172223-44172242 None:intergenic 40.0%
CAGCAATAGGTTTCACAACT+TGG - chr8_2:44172338-44172357 Msa1249510:intron 40.0%
TCACCGTCTCAACATTGTAT+GGG + chr8_2:44172547-44172566 None:intergenic 40.0%
TTCACCGTCTCAACATTGTA+TGG + chr8_2:44172548-44172567 None:intergenic 40.0%
AACAAAGACGTGCAGTTTGT+AGG - chr8_2:44172626-44172645 Msa1249510:CDS 40.0%
! GTTTGTAGGTATTGCACAGA+AGG - chr8_2:44172640-44172659 Msa1249510:CDS 40.0%
! TTGTAGGTATTGCACAGAAG+GGG - chr8_2:44172642-44172661 Msa1249510:CDS 40.0%
CAATAAATAAGAGCTCTCGC+CGG - chr8_2:44172810-44172829 Msa1249510:intron 40.0%
CCAGAGCTTAAGAATTAGAG+AGG + chr8_2:44173230-44173249 None:intergenic 40.0%
CCTCTCTAATTCTTAAGCTC+TGG - chr8_2:44173227-44173246 Msa1249510:CDS 40.0%
!! CAAAGCATTGCCAAAATACC+AGG - chr8_2:44173515-44173534 Msa1249510:intron 40.0%
AGGTCCTTATTACCCTTTGA+AGG - chr8_2:44173559-44173578 Msa1249510:intron 40.0%
AGGTCCTTCAAAGGGTAATA+AGG + chr8_2:44173566-44173585 None:intergenic 40.0%
AACTCTGGTTGTAACTTTGC+AGG - chr8_2:44173846-44173865 Msa1249510:intron 40.0%
GTCAGATTACCAGAAAGTCA+TGG - chr8_2:44173914-44173933 Msa1249510:intron 40.0%
TTACTTGAACCTCATGTACC+TGG + chr8_2:44173944-44173963 None:intergenic 40.0%
GATGACTGCAAAAGACATCA+TGG + chr8_2:44174031-44174050 None:intergenic 40.0%
GAGTTATTCAGCTCACAGAA+AGG - chr8_2:44174080-44174099 Msa1249510:CDS 40.0%
!! CTCTATTTCTGAGCCCAAAA+AGG - chr8_2:44174147-44174166 Msa1249510:CDS 40.0%
GTCTGTAAGTGCTTATTTGC+TGG - chr8_2:44174253-44174272 Msa1249510:intron 40.0%
!!! TAGGTTTTGGTTATTGGTGG+AGG - chr8_2:44174529-44174548 Msa1249510:intron 40.0%
GTTACTTAGCTTAGGACCTT+AGG + chr8_2:44174679-44174698 None:intergenic 40.0%
GTGATTCACAACTGTGATTG+CGG - chr8_2:44174712-44174731 Msa1249510:intron 40.0%
GACAAATGAGGTAGCCATTA+CGG + chr8_2:44174738-44174757 None:intergenic 40.0%
! TTTTTCCCTGAAGTTGCAGT+AGG - chr8_2:44174975-44174994 Msa1249510:intron 40.0%
! TTTTCCCTGAAGTTGCAGTA+GGG - chr8_2:44174976-44174995 Msa1249510:intron 40.0%
TAAACCCTACTGCAACTTCA+GGG + chr8_2:44174983-44175002 None:intergenic 40.0%
TTAAACCCTACTGCAACTTC+AGG + chr8_2:44174984-44175003 None:intergenic 40.0%
!! GATTGGTTGTGATTTGCTGA+TGG + chr8_2:44175115-44175134 None:intergenic 40.0%
! GACTTTTCTCACAATGGTCT+AGG - chr8_2:44175295-44175314 Msa1249510:intron 40.0%
ACTGCATCATAAGTTCCTTC+TGG + chr8_2:44175343-44175362 None:intergenic 40.0%
! CTTGCCACTGACTGAAAAAA+TGG + chr8_2:44175514-44175533 None:intergenic 40.0%
!!! CATTTTTTCAGTCAGTGGCA+AGG - chr8_2:44175512-44175531 Msa1249510:intron 40.0%
AAGGCTCTGTCAATTATGCT+TGG - chr8_2:44175635-44175654 Msa1249510:intron 40.0%
CTACAGTTCCTACATATCCA+AGG - chr8_2:44175659-44175678 Msa1249510:intron 40.0%
! GCCATTGATAACACCTATTG+TGG + chr8_2:44176051-44176070 None:intergenic 40.0%
! GTATCGGTATCGTATCGTAT+CGG + chr8_2:44176177-44176196 None:intergenic 40.0%
GATACGATACGATACCGATA+CGG - chr8_2:44176176-44176195 Msa1249510:intron 40.0%
! ATTTTCCCGTATCACCGTAT+CGG + chr8_2:44176193-44176212 None:intergenic 40.0%
CTTACGATGTTCTCTTTGGA+TGG + chr8_2:44176415-44176434 None:intergenic 40.0%
!! TCAGTGGTAATGGTTAGAAG+AGG - chr8_2:44176561-44176580 Msa1249510:intron 40.0%
!! CAGTGGTAATGGTTAGAAGA+GGG - chr8_2:44176562-44176581 Msa1249510:intron 40.0%
GGAGTATAAGTAAGCTGTGT+CGG - chr8_2:44176741-44176760 Msa1249510:intron 40.0%
AAACAATGACCGATACGTGT+CGG + chr8_2:44176868-44176887 None:intergenic 40.0%
! TACGCGTATCGGAAAAGTAT+CGG + chr8_2:44176915-44176934 None:intergenic 40.0%
! TACTTTTCCGATACGCGTAT+CGG - chr8_2:44176916-44176935 Msa1249510:intron 40.0%
!!! TCACCATTTTTGGAGTATCG+GGG - chr8_2:44176986-44177005 Msa1249510:intron 40.0%
! AGGGTGTTATCAATGGCAAA+TGG - chr8_2:44177015-44177034 Msa1249510:intron 40.0%
GTGTTATCAATGGCAAATGG+CGG - chr8_2:44177018-44177037 Msa1249510:intron 40.0%
CTAACACCGTGCTTATATCA+TGG + chr8_2:44177065-44177084 None:intergenic 40.0%
ATGCTATGGCAGAAAAATGG+CGG - chr8_2:44177093-44177112 Msa1249510:intron 40.0%
!! AGAAAAATGGCGGATACAGT+AGG - chr8_2:44177103-44177122 Msa1249510:intron 40.0%
!! GAAAAATGGCGGATACAGTA+GGG - chr8_2:44177104-44177123 Msa1249510:intron 40.0%
!! AAAAATGGCGGATACAGTAG+GGG - chr8_2:44177105-44177124 Msa1249510:intron 40.0%
! TTACCAGGTGCTATAGATCA+CGG + chr8_2:44177131-44177150 None:intergenic 40.0%
CAATACTAGTGCTTGGAGTT+AGG - chr8_2:44177401-44177420 Msa1249510:intron 40.0%
!! TTTACTTCCTCTAGGACGTT+AGG - chr8_2:44177486-44177505 Msa1249510:intron 40.0%
! TCTAAAACCTAACGTCCTAG+AGG + chr8_2:44177496-44177515 None:intergenic 40.0%
TTTATGCTTTGCTCAACCGA+CGG - chr8_2:44177627-44177646 Msa1249510:intron 40.0%
CAAACATCCAGTGAATCCTA+TGG - chr8_2:44177665-44177684 Msa1249510:intron 40.0%
AGAAAGCTGCAGTATGAATC+TGG + chr8_2:44177948-44177967 None:intergenic 40.0%
ATCTTCCTCTTCGCAAATGA+CGG + chr8_2:44177976-44177995 None:intergenic 40.0%
TCATTTGCGAAGAGGAAGAT+TGG - chr8_2:44177976-44177995 Msa1249510:intron 40.0%
! CTCGATTGGTCATCTATCAA+CGG - chr8_2:44178078-44178097 Msa1249510:CDS 40.0%
CATAGGTGGTCATGTTTATG+AGG + chr8_2:44178200-44178219 None:intergenic 40.0%
GTGAGACTAGTGGAATGGAA+AGG + chr8_2:44169888-44169907 None:intergenic 45.0%
TATGGGTGAGACTAGTGGAA+TGG + chr8_2:44169893-44169912 None:intergenic 45.0%
TGTTGTATGGGTGAGACTAG+TGG + chr8_2:44169898-44169917 None:intergenic 45.0%
TGGGGTTTCGGTTTCAACAA+TGG - chr8_2:44170118-44170137 Msa1249510:three_prime_UTR 45.0%
GGTGTTTCATCTGTGATTCC+TGG - chr8_2:44170179-44170198 Msa1249510:three_prime_UTR 45.0%
TTTCATCTGTGATTCCTGGG+TGG - chr8_2:44170183-44170202 Msa1249510:three_prime_UTR 45.0%
!! TGTGTTGGTGATTCATTGGC+TGG - chr8_2:44170441-44170460 Msa1249510:intron 45.0%
! GGTGATTCATTGGCTGGAAA+AGG - chr8_2:44170447-44170466 Msa1249510:intron 45.0%
TAACAGCAATTGTGGCACTG+TGG + chr8_2:44171020-44171039 None:intergenic 45.0%
TCGTGGGTGGGATTTAGTAT+GGG - chr8_2:44171240-44171259 Msa1249510:intron 45.0%
!!! AAGGGAGTTTTTTCCCACCA+TGG - chr8_2:44171265-44171284 Msa1249510:intron 45.0%
!!! AGGGAGTTTTTTCCCACCAT+GGG - chr8_2:44171266-44171285 Msa1249510:intron 45.0%
TCACACTCACCACCAACATA+CGG - chr8_2:44171362-44171381 Msa1249510:intron 45.0%
AGGAGAGGAAGAAAGAGAGT+TGG + chr8_2:44171393-44171412 None:intergenic 45.0%
!! GGTGTGGTTTTTCAGTTTGG+GGG + chr8_2:44171691-44171710 None:intergenic 45.0%
!! GGGTGTGGTTTTTCAGTTTG+GGG + chr8_2:44171692-44171711 None:intergenic 45.0%
!!! TGCGATCCGTTTTGGGATTT+TGG - chr8_2:44171745-44171764 Msa1249510:intron 45.0%
TTCTCTCCCCCAACAAACTA+AGG + chr8_2:44171905-44171924 None:intergenic 45.0%
TCAACAGCTACAACAGATGG+TGG - chr8_2:44172022-44172041 Msa1249510:intron 45.0%
CAACAGCTACAACAGATGGT+GGG - chr8_2:44172023-44172042 Msa1249510:intron 45.0%
GGTGGGATTTAGTATGGGAA+AGG + chr8_2:44171245-44171264 None:intergenic 45.0%
! GTGGAAACAATTTGGTGGAG+GGG + chr8_2:44172189-44172208 None:intergenic 45.0%
ACGAATGGGGAAGACAAAAG+TGG + chr8_2:44172208-44172227 None:intergenic 45.0%
TCGCTTCTACCTTTCTTCCA+TGG - chr8_2:44172233-44172252 Msa1249510:intron 45.0%
TAGGGTTGACTGAGTGATAG+TGG - chr8_2:44172672-44172691 Msa1249510:CDS 45.0%
!! GTTGACTGAGTGATAGTGGA+AGG - chr8_2:44172676-44172695 Msa1249510:CDS 45.0%
!! TGATAGTGGAAGGAGGTAAG+AGG - chr8_2:44172686-44172705 Msa1249510:CDS 45.0%
!! GATAGTGGAAGGAGGTAAGA+GGG - chr8_2:44172687-44172706 Msa1249510:CDS 45.0%
AGGTAAGAGGGAGAATTGAC+TGG - chr8_2:44172699-44172718 Msa1249510:CDS 45.0%
TAAGAGGGAGAATTGACTGG+AGG - chr8_2:44172702-44172721 Msa1249510:CDS 45.0%
TACCAATCGTAGGACCCAAT+CGG - chr8_2:44173387-44173406 Msa1249510:intron 45.0%
GCAGTCATCAACATATGGCA+AGG - chr8_2:44174042-44174061 Msa1249510:intron 45.0%
!!! GGCAAGGTTCTTGTTTTGGA+TGG - chr8_2:44174058-44174077 Msa1249510:CDS 45.0%
GGCTCAGAAATAGAGCAAAG+AGG + chr8_2:44174142-44174161 None:intergenic 45.0%
TTGGTTATTGGTGGAGGTGA+TGG - chr8_2:44174535-44174554 Msa1249510:intron 45.0%
TAGGACCTTAGGTTAGAGAC+AGG + chr8_2:44174668-44174687 None:intergenic 45.0%
TAGAAGTCCTGACTTTGTGC+AGG - chr8_2:44174941-44174960 Msa1249510:intron 45.0%
TTGGAAACCTGCACAAAGTC+AGG + chr8_2:44174951-44174970 None:intergenic 45.0%
!! TTTTTGAAGGCAGCTCCAGA+AGG - chr8_2:44175325-44175344 Msa1249510:intron 45.0%
GTGGATTCATCTGACCCTAT+TGG - chr8_2:44175367-44175386 Msa1249510:intron 45.0%
ATATCCTTAAGGTCCTGCTC+AGG - chr8_2:44175474-44175493 Msa1249510:intron 45.0%
! TTTTCGAAAAGCTCCTGAGC+AGG + chr8_2:44175490-44175509 None:intergenic 45.0%
! GCACTCAGGCTGAAAGTATA+TGG - chr8_2:44175560-44175579 Msa1249510:intron 45.0%
ATCGGTATCGTGTCAGGTAT+CGG + chr8_2:44176159-44176178 None:intergenic 45.0%
! TATCGTATCGGTATCGTGTC+AGG + chr8_2:44176165-44176184 None:intergenic 45.0%
ACGATACCGATACGGTGATA+CGG - chr8_2:44176184-44176203 Msa1249510:intron 45.0%
! TACGCGTATCGGAGAAGTAT+CGG + chr8_2:44176834-44176853 None:intergenic 45.0%
TACTTCTCCGATACGCGTAT+CGG - chr8_2:44176835-44176854 Msa1249510:intron 45.0%
!! ACGCGTATCGGAAAAGTATC+GGG + chr8_2:44176914-44176933 None:intergenic 45.0%
! ACTTTTCCGATACGCGTATC+GGG - chr8_2:44176917-44176936 Msa1249510:intron 45.0%
! TATCGGTATCGGATACGTGT+CGG - chr8_2:44176953-44176972 Msa1249510:intron 45.0%
AAGCCCCGATACTCCAAAAA+TGG + chr8_2:44176992-44177011 None:intergenic 45.0%
!! GCTTCAGAGGGTGTTATCAA+TGG - chr8_2:44177008-44177027 Msa1249510:intron 45.0%
!! CAATGGCAAATGGCGGATTA+CGG - chr8_2:44177025-44177044 Msa1249510:intron 45.0%
!!! GGCATGGCAGATTTTTTACC+AGG + chr8_2:44177146-44177165 None:intergenic 45.0%
ATCTGCCATGCCATAAATGG+TGG - chr8_2:44177154-44177173 Msa1249510:intron 45.0%
TTGTCAATTGCGAATCGCAG+AGG - chr8_2:44177268-44177287 Msa1249510:intron 45.0%
GAAATCAACAAGAGGTCCGT+CGG + chr8_2:44177646-44177665 None:intergenic 45.0%
AGGGAAATGCAGAAGATGGT+TGG + chr8_2:44177754-44177773 None:intergenic 45.0%
AGAGCTCAAAGTAGCTCATG+TGG - chr8_2:44178026-44178045 Msa1249510:CDS 45.0%
CAACGGACCATGGAATAAGT+CGG - chr8_2:44178095-44178114 Msa1249510:CDS 45.0%
!! TTAGGCACCGACTTATTCCA+TGG + chr8_2:44178105-44178124 None:intergenic 45.0%
GGTGCCTAAATTTGATGTCG+AGG - chr8_2:44178116-44178135 Msa1249510:CDS 45.0%
! TCTTTTATGGTCTGTGCCTG+TGG - chr8_2:44178325-44178344 Msa1249510:five_prime_UTR 45.0%
! TGGCGTGTCTTGAATGCTTT+TGG - chr8_2:44178345-44178364 Msa1249510:five_prime_UTR 45.0%
!! AGGCTCTGTTTGGCTTTGAC+TGG + chr8_2:44169973-44169992 None:intergenic 50.0%
ATACTCTCTGCAGCAGCCAT+TGG + chr8_2:44170044-44170063 None:intergenic 50.0%
AATGGCTGCTGCAGAGAGTA+TGG - chr8_2:44170043-44170062 Msa1249510:three_prime_UTR 50.0%
! TGCAGAGAGTATGGTGGAAC+TGG - chr8_2:44170052-44170071 Msa1249510:three_prime_UTR 50.0%
GGTGGTGATAAGGACCCAAA+TGG - chr8_2:44170152-44170171 Msa1249510:three_prime_UTR 50.0%
GAAATTAGCCCAATGTGGCC+TGG - chr8_2:44170212-44170231 Msa1249510:CDS 50.0%
ACATCGGCACTATTCCGTAG+TGG + chr8_2:44171101-44171120 None:intergenic 50.0%
GTCGTGGGTGGGATTTAGTA+TGG - chr8_2:44171239-44171258 Msa1249510:intron 50.0%
GTGCACAAGGTTTGAAGGAG+AGG + chr8_2:44171408-44171427 None:intergenic 50.0%
! AATTGCGGTGACGGTGACAA+GGG + chr8_2:44171458-44171477 None:intergenic 50.0%
! AAATTGCGGTGACGGTGACA+AGG + chr8_2:44171459-44171478 None:intergenic 50.0%
!! CCATGGATTGGATTTGGGTG+TGG + chr8_2:44171707-44171726 None:intergenic 50.0%
CCACACCCAAATCCAATCCA+TGG - chr8_2:44171704-44171723 Msa1249510:intron 50.0%
AAAGATCTGCAGACACGGGA+AGG - chr8_2:44171973-44171992 Msa1249510:intron 50.0%
!!! GGGGAGTTTTTTCCCACCAT+GGG + chr8_2:44172132-44172151 None:intergenic 50.0%
!!! AGGGGAGTTTTTTCCCACCA+TGG + chr8_2:44172133-44172152 None:intergenic 50.0%
! AGGTATTGCACAGAAGGGGA+TGG - chr8_2:44172646-44172665 Msa1249510:CDS 50.0%
CACAGAAGGGGATGGCAATA+GGG - chr8_2:44172654-44172673 Msa1249510:CDS 50.0%
!! GACTGAGTGATAGTGGAAGG+AGG - chr8_2:44172679-44172698 Msa1249510:CDS 50.0%
CCTGGAAGACCATGACTTTC+TGG + chr8_2:44173926-44173945 None:intergenic 50.0%
CCAGAAAGTCATGGTCTTCC+AGG - chr8_2:44173923-44173942 Msa1249510:intron 50.0%
CATGGTCTTCCAGGTACATG+AGG - chr8_2:44173932-44173951 Msa1249510:intron 50.0%
TGCTGGCATAAACACTTGCG+AGG - chr8_2:44174270-44174289 Msa1249510:intron 50.0%
! GTTATTGGTGGAGGTGATGG+AGG - chr8_2:44174538-44174557 Msa1249510:intron 50.0%
!! AATGACGTGCTACTTCTCGC+AGG + chr8_2:44174567-44174586 None:intergenic 50.0%
AACTGTGATTGCGGCCGTAA+TGG - chr8_2:44174721-44174740 Msa1249510:intron 50.0%
ATCCTAATGCGACTGTGACC+AGG - chr8_2:44174781-44174800 Msa1249510:intron 50.0%
CAATGCGAAGAGTCACACGT+GGG + chr8_2:44175010-44175029 None:intergenic 50.0%
! GTGACTCTTCGCATTGGTGA+TGG - chr8_2:44175014-44175033 Msa1249510:intron 50.0%
TGAGTGCACATAACTCCTCC+TGG + chr8_2:44175547-44175566 None:intergenic 50.0%
AGGAGGAGTTATGTGCACTC+AGG - chr8_2:44175546-44175565 Msa1249510:intron 50.0%
TCGGTATCGTGTCAGGTATC+GGG + chr8_2:44176158-44176177 None:intergenic 50.0%
CGATACCGATACGGTGATAC+GGG - chr8_2:44176185-44176204 Msa1249510:intron 50.0%
TATCGAGGCCGTATCGTATC+GGG + chr8_2:44176226-44176245 None:intergenic 50.0%
GTATCGAGGCCGTATCGTAT+CGG + chr8_2:44176227-44176246 None:intergenic 50.0%
!! ACGCGTATCGGAGAAGTATC+GGG + chr8_2:44176833-44176852 None:intergenic 50.0%
ACTTCTCCGATACGCGTATC+GGG - chr8_2:44176836-44176855 Msa1249510:intron 50.0%
ATACGTCCCGATACGCGTAT+CGG + chr8_2:44176845-44176864 None:intergenic 50.0%
ATACGTCCCGATACGCGTAT+CGG + chr8_2:44176845-44176864 None:intergenic 50.0%
ATACGCGTATCGGGACGTAT+CGG - chr8_2:44176845-44176864 Msa1249510:intron 50.0%
TTGCGAATCGCAGAGGATAG+TGG - chr8_2:44177275-44177294 Msa1249510:intron 50.0%
! CGCAGAGGATAGTGGTTTGT+TGG - chr8_2:44177283-44177302 Msa1249510:intron 50.0%
GTTTGCCGTCATTTGCGAAG+AGG - chr8_2:44177968-44177987 Msa1249510:intron 50.0%
GGTCATCTATCAACGGACCA+TGG - chr8_2:44178085-44178104 Msa1249510:CDS 50.0%
AAGCATTCAAGACACGCCAC+AGG + chr8_2:44178344-44178363 None:intergenic 50.0%
GGGTTCCCAAACACTGCCTT+AGG + chr8_2:44169810-44169829 None:intergenic 55.0%
TTGGAGCAGCCGTATGTTGG+TGG + chr8_2:44171374-44171393 None:intergenic 55.0%
GAGTTGGAGCAGCCGTATGT+TGG + chr8_2:44171377-44171396 None:intergenic 55.0%
TGGGGGAGAGAAGCCATTCT+TGG - chr8_2:44171913-44171932 Msa1249510:intron 55.0%
ATCTGCAGACACGGGAAGGA+AGG - chr8_2:44171977-44171996 Msa1249510:intron 55.0%
GGGGAGAACACCACTTAGGT+GGG + chr8_2:44172170-44172189 None:intergenic 55.0%
AGGGGAGAACACCACTTAGG+TGG + chr8_2:44172171-44172190 None:intergenic 55.0%
TGGAGGGGAGAACACCACTT+AGG + chr8_2:44172174-44172193 None:intergenic 55.0%
GCACAGAAGGGGATGGCAAT+AGG - chr8_2:44172653-44172672 Msa1249510:CDS 55.0%
GACCGATTGGGTCCTACGAT+TGG + chr8_2:44173392-44173411 None:intergenic 55.0%
GTCCTGGTCACAGTCGCATT+AGG + chr8_2:44174786-44174805 None:intergenic 55.0%
CCAATGCGAAGAGTCACACG+TGG + chr8_2:44175011-44175030 None:intergenic 55.0%
CCACGTGTGACTCTTCGCAT+TGG - chr8_2:44175008-44175027 Msa1249510:intron 55.0%
AGCTCCTGAGCAGGACCTTA+AGG + chr8_2:44175481-44175500 None:intergenic 55.0%
! CGGTATCGTGTCAGGTATCG+GGG + chr8_2:44176157-44176176 None:intergenic 55.0%
GGGACGTATCCGACACGTAT+CGG - chr8_2:44176856-44176875 Msa1249510:intron 55.0%
TACGCGTATCGGGACGTATC+GGG - chr8_2:44176846-44176865 Msa1249510:intron 55.0%
! GTATCGGGGCGTATCGGTAT+CGG - chr8_2:44176942-44176961 Msa1249510:intron 55.0%
!! TTGGAGTATCGGGGCTTCAG+AGG - chr8_2:44176995-44177014 Msa1249510:intron 55.0%
!! TGGAGTATCGGGGCTTCAGA+GGG - chr8_2:44176996-44177015 Msa1249510:intron 55.0%
! GGCTGCTGCAGAGAGTATGG+TGG - chr8_2:44170046-44170065 Msa1249510:three_prime_UTR 60.0%
! CGGTGACGGTGACAAGGGAA+TGG + chr8_2:44171453-44171472 None:intergenic 60.0%
ACGCGTATCGGGACGTATCG+GGG - chr8_2:44176928-44176947 Msa1249510:intron 60.0%
GGGCCGTGATCTATAGCACC+TGG - chr8_2:44177125-44177144 Msa1249510:intron 60.0%
GTGGCAAGGGCTCTTCGTCC+AGG - chr8_2:44175526-44175545 Msa1249510:intron 65.0%
GCAAGGGCTCTTCGTCCAGG+AGG - chr8_2:44175529-44175548 Msa1249510:intron 65.0%
CGGGACGTATCGGGGCGTAT+CGG - chr8_2:44176936-44176955 Msa1249510:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 44169760 44178459 44169760 ID=Msa1249510;Name=Msa1249510
chr8_2 mRNA 44169760 44178459 44169760 ID=Msa1249510-mRNA-1;Parent=Msa1249510;Name=Msa1249510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=284|1|1|1|1|1|9|445|342
chr8_2 exon 44169760 44170270 44169760 ID=Msa1249510-mRNA-1:exon:13453;Parent=Msa1249510-mRNA-1
chr8_2 exon 44170479 44170605 44170479 ID=Msa1249510-mRNA-1:exon:13452;Parent=Msa1249510-mRNA-1
chr8_2 exon 44172539 44172734 44172539 ID=Msa1249510-mRNA-1:exon:13451;Parent=Msa1249510-mRNA-1
chr8_2 exon 44172831 44172902 44172831 ID=Msa1249510-mRNA-1:exon:13450;Parent=Msa1249510-mRNA-1
chr8_2 exon 44173184 44173256 44173184 ID=Msa1249510-mRNA-1:exon:13449;Parent=Msa1249510-mRNA-1
chr8_2 exon 44173583 44173687 44173583 ID=Msa1249510-mRNA-1:exon:13448;Parent=Msa1249510-mRNA-1
chr8_2 exon 44174051 44174173 44174051 ID=Msa1249510-mRNA-1:exon:13447;Parent=Msa1249510-mRNA-1
chr8_2 exon 44174275 44174351 44174275 ID=Msa1249510-mRNA-1:exon:13446;Parent=Msa1249510-mRNA-1
chr8_2 exon 44177986 44178459 44177986 ID=Msa1249510-mRNA-1:exon:13445;Parent=Msa1249510-mRNA-1
chr8_2 five_prime_UTR 44178176 44178459 44178176 ID=Msa1249510-mRNA-1:five_prime_utr;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44177986 44178175 44177986 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44174275 44174351 44174275 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44174051 44174173 44174051 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44173583 44173687 44173583 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44173184 44173256 44173184 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44172831 44172902 44172831 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44172539 44172734 44172539 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44170479 44170605 44170479 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 CDS 44170205 44170270 44170205 ID=Msa1249510-mRNA-1:cds;Parent=Msa1249510-mRNA-1
chr8_2 three_prime_UTR 44169760 44170204 44169760 ID=Msa1249510-mRNA-1:three_prime_utr;Parent=Msa1249510-mRNA-1
Gene Sequence

>Msa1249510

ATGGCTGCTGCAGAGAGTATGGTGGAACTGGAATCCTCCATGAAGAGACAAAAAGATGATGAAGAAGAGAATAATGGGGTTTCGGTTTCAACAATGGATATTGAAGGTGGTGGTGATAAGGACCCAAATGGTAATGGTGTTTCATCTGTGATTCCTGGGTGGTTTTCTGAAATTAGCCCAATGTGGCCTGGAGAAGCTCACTCCTTGAAGATAGAAAAGATTTTGTTTCAAGGAAAGTCAGATTACCAGAAAGTCATGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTGTTTTGGATGGAGTTATTCAGCTCACAGAAAGGGACGAATGTGCCTACCAAGAAATGATCACTCATCTTCCTCTTTGCTCTATTTCTGAGCCCAAAAAGGTTTTGGTTATTGGTGGAGGTGATGGAGGAGTCCTGCGAGAAGTAGCACGTCATTCTTCAATTGAAAAGATAGACATTTGTGAAATTGACAATATGGTCGTTGAAGTTTCCAAACAATTTTTCCCTGAAGTTGCAGTAGGGTTTAACGACCCACGTGTGACTCTTCGCATTGGTGATGGAGTTGCATTTTTGAAGGCAGCTCCAGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGACCCTATTGGTCCTGCTCAGGAGCTTTTCGAAAAGCCATTTTTTCAGTCAGTGGCAAGGGCTCTTCGTCCAGGAGGAGTTATGTGCACTCAGGCTGAAAGTATATGGCTTCATATGGATATAATTGAGGACATTGTGTCCAATTGTCGTCAGATTTTCAAAGGCTCTGTCAATTATGCTTGGACTACAGTTCCTACATATCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACCGACGGACCTCTTGTTGATTTCAAACATCCAGTGAATCCTATGGATGAAAACGAATGTCAGAAGTCAGTAAGACCACTCAAATTTTACAACTCTGAGATTCATACTGCAGCTTTCTGTTTGCCGTCATTTGCGAAGAGGAAGATTGGTTCCAAAGAAAACTGA
Protein sequence

>Msa1249510

MAAAESMVELESSMKRQKDDEEENNGVSVSTMDIEGGGDKDPNGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISEPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFNDPRVTLRIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTDGPLVDFKHPVNPMDENECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSKEN*