AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1196820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1196820 MtrunA17_Chr8g0365071 97.661 342 8 0 1 342 1 342 0.0 692
Msa1196820 MtrunA17_Chr5g0413701 81.609 348 50 3 2 342 3 343 0.0 584
Msa1196820 MtrunA17_Chr3g0126551 66.019 309 90 2 44 337 45 353 1.61e-145 415
Msa1196820 MtrunA17_Chr3g0117881 61.224 294 110 1 51 340 41 334 1.76e-143 409
Msa1196820 MtrunA17_Chr1g0158851 64.379 306 96 3 44 337 53 357 1.00e-138 398
Msa1196820 MtrunA17_Chr5g0394371 35.965 228 137 7 71 293 42 265 2.35e-38 139
Msa1196820 MtrunA17_Chr1g0150851 31.136 273 158 9 45 295 21 285 2.04e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1196820 AT1G23820.1 79.154 331 64 4 12 342 9 334 0.0 541
Msa1196820 AT1G70310.1 78.788 330 66 2 14 342 14 340 0.0 538
Msa1196820 AT1G23820.2 79.775 267 52 2 12 278 51 315 1.09e-157 445
Msa1196820 AT5G53120.1 65.584 308 89 3 48 339 49 355 3.68e-144 412
Msa1196820 AT5G53120.4 65.584 308 89 3 48 339 49 355 3.68e-144 412
Msa1196820 AT5G53120.2 65.584 308 89 3 48 339 49 355 3.68e-144 412
Msa1196820 AT5G53120.5 65.584 308 89 3 48 339 49 355 3.68e-144 412
Msa1196820 AT5G53120.3 65.584 308 89 3 48 339 49 355 3.68e-144 412
Msa1196820 AT5G53120.7 65.584 308 89 3 48 339 66 372 1.33e-143 411
Msa1196820 AT5G53120.6 60.000 335 90 4 48 339 49 382 2.47e-139 400
Msa1196820 AT5G19530.2 32.171 258 163 7 68 320 40 290 9.50e-39 140
Msa1196820 AT5G19530.1 32.171 258 163 7 68 320 47 297 1.01e-38 140

Find 96 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGAAGACCATGACTTTC+TGG 0.202805 8_1:+46502148 None:intergenic
GATGAGTAACTGTTTATTTC+AGG 0.206735 8_1:-46498922 Msa1196820:three_prime_UTR
ATCATCTCTTTGTCTCTTCA+TGG 0.223026 8_1:+46506084 None:intergenic
TGGAATAGAATAAAAGAAAA+AGG 0.247060 8_1:+46506236 None:intergenic
ATATGGCAAGGTTCTTGTTT+TGG 0.280455 8_1:-46502017 Msa1196820:CDS
GTATCTTAGGTTCTTTCATT+TGG 0.285506 8_1:-46498690 Msa1196820:three_prime_UTR
GGTGTTTCATCTGTGATTCC+TGG 0.309804 8_1:-46505986 Msa1196820:CDS
GATGATGAAGAAGAGAATAA+TGG 0.312917 8_1:-46506067 Msa1196820:CDS
CCAGAAAGTCATGGTCTTCC+AGG 0.315838 8_1:-46502148 Msa1196820:intron
TGGCGTGTCTTGAATGCTTT+TGG 0.323325 8_1:-46498712 Msa1196820:three_prime_UTR
CAGGATAATGACAAAGTTGA+TGG 0.324169 8_1:-46498903 Msa1196820:three_prime_UTR
ATGATGAAGAAGAGAATAAT+GGG 0.324828 8_1:-46506066 Msa1196820:CDS
TAATATCCTAAGGCAGTGTT+TGG 0.335057 8_1:-46506359 Msa1196820:five_prime_UTR
TTGGTTATTGGTGGAGGTGA+TGG 0.346832 8_1:-46501536 Msa1196820:CDS
CTCTATTTCTGAGCCCAAAA+AGG 0.350393 8_1:-46501924 Msa1196820:intron
TTTGAAAATCTGACGACAAT+TGG 0.351640 8_1:+46500456 None:intergenic
GAAGATGAGTGATCATTTCT+TGG 0.351645 8_1:+46501954 None:intergenic
TTGAGAAATTATTGGAGAAA+TGG 0.354209 8_1:+46506216 None:intergenic
GCTAAGGCTCTGTTTGGCTT+TGG 0.356748 8_1:+46506181 None:intergenic
ACTGCATCATAAGTTCCTTC+TGG 0.359338 8_1:+46500730 None:intergenic
GATGAAACACCATTACCATT+TGG 0.374994 8_1:+46505998 None:intergenic
CATGGCTGCTGCAGAGAGTA+TGG 0.377150 8_1:-46506122 Msa1196820:CDS
AGGCTCTGTTTGGCTTTGGC+TGG 0.383112 8_1:+46506185 None:intergenic
TTAAACCCTACTGCAACTTC+AGG 0.398829 8_1:+46501089 None:intergenic
GCACTCAGGCTGAAAGTATA+TGG 0.405219 8_1:-46500510 Msa1196820:CDS
TACTCATCAACATGAAATTT+AGG 0.405873 8_1:+46498937 None:intergenic
ATGAAACACCATTACCATTT+GGG 0.414247 8_1:+46505999 None:intergenic
CATTTGTGAAATTGACAATA+TGG 0.421750 8_1:-46501465 Msa1196820:CDS
AACTTATGATGCAGTTATAG+TGG 0.422946 8_1:-46500722 Msa1196820:CDS
TTATTAGCTAAGGCTCTGTT+TGG 0.426988 8_1:+46506175 None:intergenic
GTGGATTCATCTGACCCTAT+TGG 0.434928 8_1:-46500703 Msa1196820:intron
TCATTTGCGAAGAGGAAGAT+TGG 0.443392 8_1:-46499081 Msa1196820:CDS
GTTATTGGTGGAGGTGATGG+AGG 0.453500 8_1:-46501533 Msa1196820:CDS
CATAGGCGGTCATGTTTATG+AGG 0.461211 8_1:+46498860 None:intergenic
AAAACTAACCAGGCCACATT+GGG 0.461244 8_1:+46505945 None:intergenic
GGGTTCCCAAACACTGCCTT+AGG 0.467391 8_1:+46506353 None:intergenic
CGAGTAAAAGATATGAATGA+TGG 0.469620 8_1:+46498998 None:intergenic
TATGTTGAAATATGATTAGC+TGG 0.480021 8_1:-46498841 Msa1196820:three_prime_UTR
TGCAGAGAGTATGGTGGAAC+TGG 0.481978 8_1:-46506113 Msa1196820:CDS
TGAAAGTATATGGCTTCATA+TGG 0.483697 8_1:-46500500 Msa1196820:CDS
AAGGCTCTGTCAATTATGCT+TGG 0.485127 8_1:-46500435 Msa1196820:CDS
TTTCTCTGAATTATTAGCTA+AGG 0.490717 8_1:+46506165 None:intergenic
AAAACATACCTTGGATATGT+AGG 0.492840 8_1:+46500403 None:intergenic
GAAATTAGCCCAATGTGGCC+TGG 0.495986 8_1:-46505953 Msa1196820:intron
ACACATGTAGCATACCAATA+GGG 0.502757 8_1:+46500689 None:intergenic
GTGTTTCATCTGTGATTCCT+GGG 0.503605 8_1:-46505985 Msa1196820:CDS
CAACGAACCATGGAATAAGT+TGG 0.504697 8_1:-46498962 Msa1196820:three_prime_UTR
AATATCCTAAGGCAGTGTTT+GGG 0.511845 8_1:-46506358 Msa1196820:five_prime_UTR
GTGGCAAGGGCTCTTCGTCC+AGG 0.512123 8_1:-46500544 Msa1196820:CDS
ATGAGTGATCATTTCTTGGT+AGG 0.523282 8_1:+46501958 None:intergenic
TGAGTGCACATAACTCCTCC+TGG 0.525919 8_1:+46500526 None:intergenic
CAAACATCCAGTGAATCCTA+TGG 0.529311 8_1:-46499292 Msa1196820:CDS
TAAACCCTACTGCAACTTCA+GGG 0.530870 8_1:+46501090 None:intergenic
GCTTCATATGGATATAATTG+AGG 0.531349 8_1:-46500488 Msa1196820:CDS
GTTTCAACAATGGATGTTGA+AGG 0.531892 8_1:-46506037 Msa1196820:CDS
TTAGGCACCAACTTATTCCA+TGG 0.532304 8_1:+46498955 None:intergenic
TATGGGTGAGACTAGTGGAA+TGG 0.538921 8_1:+46506265 None:intergenic
TGGGGTTTCTGTTTCAACAA+TGG 0.540223 8_1:-46506047 Msa1196820:CDS
GAGTTATTCAGCTCACAGAA+AGG 0.548553 8_1:-46501991 Msa1196820:CDS
ATCTTCCTCTTCGCAAATGA+CGG 0.551524 8_1:+46499084 None:intergenic
GAAATCAACAAGAGGTCCCT+CGG 0.562454 8_1:+46499314 None:intergenic
GATAAAGACCCAAATGGTAA+TGG 0.563461 8_1:-46506007 Msa1196820:CDS
ATCTCTTTGTCTCTTCATGG+AGG 0.564464 8_1:+46506087 None:intergenic
AGTTATTCAGCTCACAGAAA+GGG 0.568813 8_1:-46501990 Msa1196820:CDS
GGTGGTGATAAAGACCCAAA+TGG 0.570089 8_1:-46506013 Msa1196820:CDS
GCAGTCATCAACATATGGCA+AGG 0.573215 8_1:-46502029 Msa1196820:intron
TGCATAATACTAATATCCTA+AGG 0.573538 8_1:-46506369 Msa1196820:five_prime_UTR
TGTTGTATGGGTGAGACTAG+TGG 0.594687 8_1:+46506260 None:intergenic
AGCTAATCATATTTCAACAT+AGG 0.597217 8_1:+46498843 None:intergenic
GTTTGCCGTCATTTGCGAAG+AGG 0.603922 8_1:-46499089 Msa1196820:CDS
TCAGAGTTGTAAAATTTGAG+TGG 0.611670 8_1:+46499240 None:intergenic
TTTATGCTTTGCTCAACCGA+GGG 0.613865 8_1:-46499330 Msa1196820:CDS
AGCAATGAGATTGAAAGTCT+AGG 0.616031 8_1:-46498644 Msa1196820:three_prime_UTR
CCACGTGTGACTCTTCGCAT+TGG 0.620602 8_1:-46501062 Msa1196820:CDS
GTGACTCTTCGCATTGGTGA+TGG 0.620618 8_1:-46501056 Msa1196820:intron
AGGAGGAGTTATGTGCACTC+AGG 0.621343 8_1:-46500524 Msa1196820:CDS
AAGCATTCAAGACACGCCAC+AGG 0.623562 8_1:+46498716 None:intergenic
CTACAGTTCCTACATATCCA+AGG 0.636790 8_1:-46500411 Msa1196820:intron
GTCAGATTACCAGAAAGTCA+TGG 0.643976 8_1:-46502157 Msa1196820:CDS
AATGACGTGCTACTTCTCGC+AGG 0.646893 8_1:+46501507 None:intergenic
GTGAGACTAGTGGAATGGAA+AGG 0.652688 8_1:+46506270 None:intergenic
GGTCATCTATCAACGAACCA+TGG 0.654343 8_1:-46498972 Msa1196820:three_prime_UTR
TTTCATCTGTGATTCCTGGG+TGG 0.656590 8_1:-46505982 Msa1196820:CDS
ACAATGGATGTTGAAGGTGG+TGG 0.657096 8_1:-46506031 Msa1196820:CDS
GCAAGGGCTCTTCGTCCAGG+AGG 0.657812 8_1:-46500541 Msa1196820:CDS
TGATGAAGAAGAGAATAATG+GGG 0.657977 8_1:-46506065 Msa1196820:CDS
GGATGTTTGAAATCAACAAG+AGG 0.663795 8_1:+46499306 None:intergenic
TAATCATATTTCAACATAGG+CGG 0.666160 8_1:+46498846 None:intergenic
TTTCTGAAATTAGCCCAATG+TGG 0.666459 8_1:-46505958 Msa1196820:CDS
GGCTCAGAAATAGAGCAAAG+AGG 0.682943 8_1:+46501932 None:intergenic
CTAATTTCAGAAAACCACCC+AGG 0.684797 8_1:+46505968 None:intergenic
TCAACAATGGATGTTGAAGG+TGG 0.691448 8_1:-46506034 Msa1196820:CDS
CCAATGCGAAGAGTCACACG+TGG 0.691967 8_1:+46501062 None:intergenic
AGAGCTCAAAGTAGCTCACG+TGG 0.693075 8_1:-46499031 Msa1196820:three_prime_UTR
GGCTGCTGCAGAGAGTATGG+TGG 0.698354 8_1:-46506119 Msa1196820:CDS
CAATGCGAAGAGTCACACGT+GGG 0.781444 8_1:+46501063 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr8_1:46502444-46502463 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTGGAT+TGG + chr8_1:46502440-46502459 None:intergenic 10.0%
!! TTGAAATTTAAAAAACTTAT+AGG - chr8_1:46502663-46502682 Msa1196820:intron 10.0%
!! AATTGGAAAAAAAATAAATA+GGG + chr8_1:46503828-46503847 None:intergenic 10.0%
!! AAATTGGAAAAAAAATAAAT+AGG + chr8_1:46503829-46503848 None:intergenic 10.0%
!! AATTTAAACACAAATATTTA+AGG + chr8_1:46504015-46504034 None:intergenic 10.0%
!!! TTTTATGATTGAGAAATTAT+TGG + chr8_1:46498815-46498834 None:intergenic 15.0%
!!! AAAAGTTTTTTTTTCTTTCA+TGG - chr8_1:46498880-46498899 Msa1196820:three_prime_UTR 15.0%
!!! ATTATTGTGTTTAAAATTGT+TGG - chr8_1:46499325-46499344 Msa1196820:CDS 15.0%
!!! ATTTAATTGCTCTTTAAAAA+GGG - chr8_1:46500569-46500588 Msa1196820:CDS 15.0%
!! CATTCATTAGATATAATAAA+CGG - chr8_1:46501095-46501114 Msa1196820:CDS 15.0%
!! AGTTAACTAATTTGAATATT+TGG + chr8_1:46501419-46501438 None:intergenic 15.0%
!! TATTCAAATTAGTTAACTAT+AGG - chr8_1:46501421-46501440 Msa1196820:intron 15.0%
!! ATTCAAATTAGTTAACTATA+GGG - chr8_1:46501422-46501441 Msa1196820:intron 15.0%
!! TAAGTCGTTTATTATATTTA+AGG - chr8_1:46501726-46501745 Msa1196820:intron 15.0%
!! AAGTCGTTTATTATATTTAA+GGG - chr8_1:46501727-46501746 Msa1196820:intron 15.0%
!!! CTTGATTATTTTGTATAAAT+AGG - chr8_1:46502009-46502028 Msa1196820:CDS 15.0%
!!! TAAGTTTTTAAGTTTCAAAA+AGG + chr8_1:46502536-46502555 None:intergenic 15.0%
!!! GTTTTTTATAAGTTTCTAAT+AGG + chr8_1:46502600-46502619 None:intergenic 15.0%
!! GAAACTTATAAAAAACTTAA+AGG - chr8_1:46502604-46502623 Msa1196820:intron 15.0%
!!! TCTTGTAAAAAAAAGTATAT+TGG - chr8_1:46503165-46503184 Msa1196820:intron 15.0%
!!! CTTGTAAAAAAAAGTATATT+GGG - chr8_1:46503166-46503185 Msa1196820:intron 15.0%
!!! TTAGTCAATATTTTATATTG+CGG + chr8_1:46503757-46503776 None:intergenic 15.0%
!!! GTAGTTATTTTAAATTCATT+CGG - chr8_1:46504793-46504812 Msa1196820:intron 15.0%
!! AAATTTAGTATCCAAAAAAA+TGG - chr8_1:46504975-46504994 Msa1196820:intron 15.0%
!! AAACACAAAAAACAATAAAA+AGG + chr8_1:46505532-46505551 None:intergenic 15.0%
!! AAATGAAAGAAATATTATGA+TGG + chr8_1:46505646-46505665 None:intergenic 15.0%
!!! TTTCATTTTTTTGTTATAGT+GGG - chr8_1:46505658-46505677 Msa1196820:intron 15.0%
!! GGAATAGAATAAAAGAAAAA+GGG + chr8_1:46498786-46498805 None:intergenic 20.0%
!! TGGAATAGAATAAAAGAAAA+AGG + chr8_1:46498787-46498806 None:intergenic 20.0%
!!! TTTGTGTTTTTGTATAGTTA+TGG - chr8_1:46499348-46499367 Msa1196820:intron 20.0%
!! AAGTAATTGAATGTAATAAC+AGG + chr8_1:46499465-46499484 None:intergenic 20.0%
!!! GATTTAATTGCTCTTTAAAA+AGG - chr8_1:46500568-46500587 Msa1196820:CDS 20.0%
!! TAGAATTGATGCAAAAAAAA+TGG + chr8_1:46500706-46500725 None:intergenic 20.0%
!! TGAAATTATAGAAGAGAATT+TGG - chr8_1:46500762-46500781 Msa1196820:intron 20.0%
!! GAAATTATAGAAGAGAATTT+GGG - chr8_1:46500763-46500782 Msa1196820:intron 20.0%
!!! AATTTGGGTTAATAGAAATT+GGG - chr8_1:46500778-46500797 Msa1196820:intron 20.0%
!! GAAAACAAGATTATAATAGA+AGG - chr8_1:46501249-46501268 Msa1196820:intron 20.0%
!! AATAAAAGAAAAAGTAGGAA+AGG + chr8_1:46501283-46501302 None:intergenic 20.0%
!! TGATCAATAAAAGAAAAAGT+AGG + chr8_1:46501288-46501307 None:intergenic 20.0%
!!! ATTTGGAGATTTAATTTTGT+TGG - chr8_1:46501334-46501353 Msa1196820:intron 20.0%
!! AGATTGATGCAAATATATAT+AGG + chr8_1:46501384-46501403 None:intergenic 20.0%
!! TATGTATGTATGTATGTATA+GGG + chr8_1:46501809-46501828 None:intergenic 20.0%
!! CAAACAAAAGAATATTTGAT+CGG + chr8_1:46502292-46502311 None:intergenic 20.0%
!!! ATATATTTGAGTTCATCTTA+TGG - chr8_1:46502411-46502430 Msa1196820:intron 20.0%
!! GCATTAAATTAACAACTTAA+AGG - chr8_1:46502573-46502592 Msa1196820:intron 20.0%
!!! TTTTAAGTTTGACAAAATAC+CGG + chr8_1:46502695-46502714 None:intergenic 20.0%
!!! ACCAAGTTTATTTTGATAAA+AGG + chr8_1:46502738-46502757 None:intergenic 20.0%
!!! ATCAAAATAAACTTGGTTTT+TGG - chr8_1:46502741-46502760 Msa1196820:intron 20.0%
!!! ATAGAAAAGATTTTGTTTCA+AGG - chr8_1:46502837-46502856 Msa1196820:intron 20.0%
!!! TAATTTTCTGTTTTAGGTTT+TGG - chr8_1:46503465-46503484 Msa1196820:intron 20.0%
!! AAAACAAGTTTATATCACTA+AGG + chr8_1:46504378-46504397 None:intergenic 20.0%
!! CATTACATTTAATATCCTTA+AGG - chr8_1:46504413-46504432 Msa1196820:intron 20.0%
!! TATATTACAAAAACATACCT+TGG + chr8_1:46504629-46504648 None:intergenic 20.0%
!!! TTCTTAGAATCTAAAACAAA+CGG + chr8_1:46504712-46504731 None:intergenic 20.0%
!!! TGTTTTAGATTCTAAGAAAA+TGG - chr8_1:46504714-46504733 Msa1196820:intron 20.0%
!! ATTCGGTATAAGTTAAAAAA+GGG - chr8_1:46504810-46504829 Msa1196820:intron 20.0%
!!! CTTTCATTTTTTTGTTATAG+TGG - chr8_1:46505657-46505676 Msa1196820:intron 20.0%
!!! TAATTCTTATCTTCATCTTT+TGG - chr8_1:46505855-46505874 Msa1196820:intron 20.0%
! TGCATAATACTAATATCCTA+AGG - chr8_1:46498651-46498670 Msa1196820:three_prime_UTR 25.0%
! TTGAGAAATTATTGGAGAAA+TGG + chr8_1:46498807-46498826 None:intergenic 25.0%
! TTTCTCTGAATTATTAGCTA+AGG + chr8_1:46498858-46498877 None:intergenic 25.0%
! ATGATGAAGAAGAGAATAAT+GGG - chr8_1:46498954-46498973 Msa1196820:three_prime_UTR 25.0%
! AGAAAAGAAAAAAACTAACC+AGG + chr8_1:46499088-46499107 None:intergenic 25.0%
! TTTATAACCAACATGCAAAA+GGG + chr8_1:46499121-46499140 None:intergenic 25.0%
!! TTTTATAACCAACATGCAAA+AGG + chr8_1:46499122-46499141 None:intergenic 25.0%
! AACTAACTAAACACACAAAA+AGG + chr8_1:46499151-46499170 None:intergenic 25.0%
! ATGTCTTCAATATAAAGTGT+CGG + chr8_1:46499417-46499436 None:intergenic 25.0%
! CTTATTGTCTTTAAACTTGT+TGG - chr8_1:46499579-46499598 Msa1196820:intron 25.0%
!!! ATGGAAAACTTAACTTGTAT+TGG - chr8_1:46499621-46499640 Msa1196820:intron 25.0%
!!! ACTTAACTTGTATTGGTTTT+TGG - chr8_1:46499628-46499647 Msa1196820:intron 25.0%
!!! CTTAACTTGTATTGGTTTTT+GGG - chr8_1:46499629-46499648 Msa1196820:intron 25.0%
! TTCAGTGTAATTATAAGTGT+CGG + chr8_1:46499741-46499760 None:intergenic 25.0%
!! CAATTTGTTTAAATTCCTCT+AGG - chr8_1:46500242-46500261 Msa1196820:intron 25.0%
! TTGTCAAATAGTAACTACAT+CGG + chr8_1:46500276-46500295 None:intergenic 25.0%
! TAGTTACTATTTGACAACAT+TGG - chr8_1:46500279-46500298 Msa1196820:intron 25.0%
! ACTAATTGCAGACATATAAT+AGG + chr8_1:46500327-46500346 None:intergenic 25.0%
! TATTATATGTCTGCAATTAG+TGG - chr8_1:46500326-46500345 Msa1196820:intron 25.0%
! TTTGGTTAAGCCATTAATTT+AGG - chr8_1:46500408-46500427 Msa1196820:intron 25.0%
! CTTATATTCGCCTAAATTAA+TGG + chr8_1:46500421-46500440 None:intergenic 25.0%
!! GAATTTGGGTTAATAGAAAT+TGG - chr8_1:46500777-46500796 Msa1196820:intron 25.0%
!! ATTTGGGTTAATAGAAATTG+GGG - chr8_1:46500779-46500798 Msa1196820:intron 25.0%
!! AATTCTTGTTTGTTAGGAAT+GGG + chr8_1:46500860-46500879 None:intergenic 25.0%
!! TGATTCAATTCTTGTTTGTT+AGG + chr8_1:46500866-46500885 None:intergenic 25.0%
!! AGAGTATTAAGAGTTATCAT+CGG + chr8_1:46501043-46501062 None:intergenic 25.0%
!! TAAGCTTTAATTTACAACCA+TGG + chr8_1:46501224-46501243 None:intergenic 25.0%
! ACAAGATTATAATAGAAGGA+AGG - chr8_1:46501253-46501272 Msa1196820:intron 25.0%
!! TATTTGCATCAATCTTTTGA+AGG - chr8_1:46501389-46501408 Msa1196820:intron 25.0%
! AACAAAAGTCAAATACAGTT+GGG + chr8_1:46501463-46501482 None:intergenic 25.0%
! AAACAAAAGTCAAATACAGT+TGG + chr8_1:46501464-46501483 None:intergenic 25.0%
!!! ACTGTATTTGACTTTTGTTT+AGG - chr8_1:46501464-46501483 Msa1196820:CDS 25.0%
!!! TTGACTTTTGTTTAGGAATT+AGG - chr8_1:46501471-46501490 Msa1196820:CDS 25.0%
! GTATGTATGTATGTATGTAT+AGG + chr8_1:46501810-46501829 None:intergenic 25.0%
! TATCAATGATCTTAACTCTT+TGG - chr8_1:46501911-46501930 Msa1196820:intron 25.0%
! ATCAATGATCTTAACTCTTT+GGG - chr8_1:46501912-46501931 Msa1196820:intron 25.0%
! TACTTAGTAGATAGTTATTG+CGG - chr8_1:46501970-46501989 Msa1196820:CDS 25.0%
! ATGCCTTTCTATATATTTAC+AGG + chr8_1:46502038-46502057 None:intergenic 25.0%
! AACACTTTCAACATTTACAT+AGG - chr8_1:46502069-46502088 Msa1196820:intron 25.0%
!! TTATATGTTTTACCAATCCT+AGG - chr8_1:46502323-46502342 Msa1196820:intron 25.0%
! GAACTCAAATATATTCATTG+CGG + chr8_1:46502405-46502424 None:intergenic 25.0%
!! TAGTCCTTTAAGTTTCAAAT+AGG - chr8_1:46502489-46502508 Msa1196820:intron 25.0%
! TTTCAAAAAGGTCCTTAAAA+GGG + chr8_1:46502524-46502543 None:intergenic 25.0%
! AATTTGTCCAACTTTCAAAT+AGG + chr8_1:46502631-46502650 None:intergenic 25.0%
! AAAAACTTATAGGATTAACC+CGG - chr8_1:46502673-46502692 Msa1196820:intron 25.0%
!! TTTAAGTTTGACAAAATACC+GGG + chr8_1:46502694-46502713 None:intergenic 25.0%
!! GGTATTTTGTCAAACTTAAA+AGG - chr8_1:46502694-46502713 Msa1196820:intron 25.0%
!! GCCTTTTATCAAAATAAACT+TGG - chr8_1:46502734-46502753 Msa1196820:intron 25.0%
! TAAAACTCATGAATTAAACC+TGG - chr8_1:46502780-46502799 Msa1196820:intron 25.0%
!! CAAAATCTTTTCTATCTTCA+AGG + chr8_1:46502832-46502851 None:intergenic 25.0%
!! GAAGTATAAATGACCTTTTT+GGG + chr8_1:46503112-46503131 None:intergenic 25.0%
!!! AGAAGTATAAATGACCTTTT+TGG + chr8_1:46503113-46503132 None:intergenic 25.0%
! ATGGAAATTGCTTATGAAAA+CGG - chr8_1:46503258-46503277 Msa1196820:intron 25.0%
!! TCACTGTAATTTTCTGTTTT+AGG - chr8_1:46503459-46503478 Msa1196820:intron 25.0%
! CATTTGTGAAATTGACAATA+TGG - chr8_1:46503555-46503574 Msa1196820:intron 25.0%
!! CAGGATAATAAAATTTTGTG+TGG + chr8_1:46503598-46503617 None:intergenic 25.0%
!! AAAATCATGTTACTTAGCTT+AGG + chr8_1:46503636-46503655 None:intergenic 25.0%
!! TATTGACTAAATTATCTTGC+TGG - chr8_1:46503767-46503786 Msa1196820:intron 25.0%
! ATTGACTAAATTATCTTGCT+GGG - chr8_1:46503768-46503787 Msa1196820:intron 25.0%
! TTAAGGAAACATATTAGTGT+AGG + chr8_1:46503998-46504017 None:intergenic 25.0%
! ATAAATATGACTTCTCAATG+AGG + chr8_1:46504217-46504236 None:intergenic 25.0%
!! TCTTAGAATCTAAAACAAAC+GGG + chr8_1:46504711-46504730 None:intergenic 25.0%
! CATTCGGTATAAGTTAAAAA+AGG - chr8_1:46504809-46504828 Msa1196820:intron 25.0%
! AAAAATCCATGATATAAGCA+CGG - chr8_1:46505119-46505138 Msa1196820:intron 25.0%
!! TTAATTTCATATGACCGTTT+TGG + chr8_1:46505276-46505295 None:intergenic 25.0%
! GTTATAGAATTAATGCATAG+CGG + chr8_1:46505376-46505395 None:intergenic 25.0%
!!! AGAAGTTCTGAAAAGAAAAA+GGG + chr8_1:46505836-46505855 None:intergenic 25.0%
!!! TAGAAGTTCTGAAAAGAAAA+AGG + chr8_1:46505837-46505856 None:intergenic 25.0%
!! ATTCATATCTTTTACTCGAT+TGG - chr8_1:46506027-46506046 Msa1196820:CDS 25.0%
! TACTCATCAACATGAAATTT+AGG + chr8_1:46506086-46506105 None:intergenic 25.0%
! TAATCATATTTCAACATAGG+CGG + chr8_1:46506177-46506196 None:intergenic 25.0%
! AGCTAATCATATTTCAACAT+AGG + chr8_1:46506180-46506199 None:intergenic 25.0%
! TATGTTGAAATATGATTAGC+TGG - chr8_1:46506179-46506198 Msa1196820:five_prime_UTR 25.0%
!!! GGGTTTTGATTGGTTTTAAT+GGG + chr8_1:46498690-46498709 None:intergenic 30.0%
!!! TGGGTTTTGATTGGTTTTAA+TGG + chr8_1:46498691-46498710 None:intergenic 30.0%
!! ATTCGATTTTGAGAAATGTG+AGG + chr8_1:46498714-46498733 None:intergenic 30.0%
!! AAAGAAAAAGGGTGTTGTAT+GGG + chr8_1:46498775-46498794 None:intergenic 30.0%
!! AAAAGAAAAAGGGTGTTGTA+TGG + chr8_1:46498776-46498795 None:intergenic 30.0%
GATGATGAAGAAGAGAATAA+TGG - chr8_1:46498953-46498972 Msa1196820:three_prime_UTR 30.0%
TGATGAAGAAGAGAATAATG+GGG - chr8_1:46498955-46498974 Msa1196820:three_prime_UTR 30.0%
ATGAAACACCATTACCATTT+GGG + chr8_1:46499024-46499043 None:intergenic 30.0%
!! TTATGTTTAGTTCTGTGTAG+CGG - chr8_1:46499386-46499405 Msa1196820:intron 30.0%
CTTTATATTGAAGACATGTC+TGG - chr8_1:46499420-46499439 Msa1196820:intron 30.0%
TTGAATGTAATAACAGGTGT+TGG + chr8_1:46499459-46499478 None:intergenic 30.0%
!!! TTGTTGGTTTGTGTTTTTGT+AGG - chr8_1:46499341-46499360 Msa1196820:CDS 30.0%
!!! TGTTGGTTTGTGTTTTTGTA+GGG - chr8_1:46499342-46499361 Msa1196820:CDS 30.0%
!! TTTGTGTTTTTGTAGGGTTA+TGG - chr8_1:46499602-46499621 Msa1196820:intron 30.0%
!! CAACTTAATGTGTTTTTGCA+CGG - chr8_1:46499654-46499673 Msa1196820:intron 30.0%
TCTCAAATTATTAGCTGTGT+CGG - chr8_1:46499772-46499791 Msa1196820:intron 30.0%
! AAAAGATTTGGGTTTGGATT+TGG - chr8_1:46499870-46499889 Msa1196820:intron 30.0%
ATGATTCAATACGTGTATGT+AGG + chr8_1:46500048-46500067 None:intergenic 30.0%
! GCTTTTCATTAATGATCTCA+TGG - chr8_1:46500068-46500087 Msa1196820:intron 30.0%
TTCTTTGTCATATGAACATG+TGG - chr8_1:46500371-46500390 Msa1196820:intron 30.0%
ACACACACACATATATATAG+AGG - chr8_1:46500474-46500493 Msa1196820:CDS 30.0%
CACACACACATATATATAGA+GGG - chr8_1:46500475-46500494 Msa1196820:CDS 30.0%
TTAGAATGAGAGGATTAATC+TGG - chr8_1:46500519-46500538 Msa1196820:CDS 30.0%
!! AAAAATGGTCTTGTTATAGC+TGG + chr8_1:46500691-46500710 None:intergenic 30.0%
! TTTGGGTTAATAGAAATTGG+GGG - chr8_1:46500780-46500799 Msa1196820:intron 30.0%
! CAATTCTTGTTTGTTAGGAA+TGG + chr8_1:46500861-46500880 None:intergenic 30.0%
AAACCATAAACAAGACAAGA+TGG - chr8_1:46500900-46500919 Msa1196820:intron 30.0%
! ATCACCATTTTACTATTCTC+CGG - chr8_1:46500992-46501011 Msa1196820:intron 30.0%
GATACTATATATATGCGAAC+AGG + chr8_1:46501021-46501040 None:intergenic 30.0%
AGACAAAAGTGGAAACAATT+TGG + chr8_1:46501168-46501187 None:intergenic 30.0%
AATTTACAACCATGGAAGAA+AGG + chr8_1:46501216-46501235 None:intergenic 30.0%
! TTCTTTTATTGATCAGCAAC+AGG - chr8_1:46501293-46501312 Msa1196820:intron 30.0%
TTCACAACTTGGAATAGATT+TGG - chr8_1:46501317-46501336 Msa1196820:intron 30.0%
TTTGTTTAGGAATTAGGACT+AGG - chr8_1:46501477-46501496 Msa1196820:CDS 30.0%
! TGAAATACGGATTTGAAACA+AGG - chr8_1:46501532-46501551 Msa1196820:CDS 30.0%
! GAAATACGGATTTGAAACAA+GGG - chr8_1:46501533-46501552 Msa1196820:CDS 30.0%
TTTGTTGGTATTGTACAGAA+GGG - chr8_1:46501609-46501628 Msa1196820:intron 30.0%
CGACCTGTAAATATATAGAA+AGG - chr8_1:46502032-46502051 Msa1196820:intron 30.0%
AATTCAAAGCAATCTTTGCA+AGG + chr8_1:46502136-46502155 None:intergenic 30.0%
AGAGAGGTTCAATGATAAAA+GGG + chr8_1:46502160-46502179 None:intergenic 30.0%
TAGAGAGGTTCAATGATAAA+AGG + chr8_1:46502161-46502180 None:intergenic 30.0%
!!! CTCTGGAAGTATTTTTTACT+GGG - chr8_1:46502190-46502209 Msa1196820:CDS 30.0%
! AGGACCTATTTGAAACTTAA+AGG + chr8_1:46502496-46502515 None:intergenic 30.0%
GTTTCAAAAAGGTCCTTAAA+AGG + chr8_1:46502525-46502544 None:intergenic 30.0%
TAAAGGACCTATTTGAAAGT+TGG - chr8_1:46502621-46502640 Msa1196820:intron 30.0%
! AAAAGGCAAAATGTCTCTTT+TGG + chr8_1:46502721-46502740 None:intergenic 30.0%
ATATAGACATAAGTCCAGTT+TGG + chr8_1:46503373-46503392 None:intergenic 30.0%
!!! CTGTTTTAGGTTTTGGTTAT+TGG - chr8_1:46503472-46503491 Msa1196820:intron 30.0%
!!! TTTTAGGTTTTGGTTATTGG+TGG - chr8_1:46503475-46503494 Msa1196820:intron 30.0%
! AATATTTTATATTGCGGTCC+TGG + chr8_1:46503751-46503770 None:intergenic 30.0%
! TCCAATTTTTCTTGATTGCT+CGG - chr8_1:46503841-46503860 Msa1196820:intron 30.0%
AACTTCAGGGAAAAATTGTT+TGG + chr8_1:46503920-46503939 None:intergenic 30.0%
GTAAAAAATCTTTACGCTGA+CGG - chr8_1:46504160-46504179 Msa1196820:intron 30.0%
ATTGTGAGAAAAGTCATCAT+GGG + chr8_1:46504240-46504259 None:intergenic 30.0%
AACTTATGATGCAGTTATAG+TGG - chr8_1:46504298-46504317 Msa1196820:intron 30.0%
! TGAAAGTATATGGCTTCATA+TGG - chr8_1:46504520-46504539 Msa1196820:intron 30.0%
GCTTCATATGGATATAATTG+AGG - chr8_1:46504532-46504551 Msa1196820:intron 30.0%
TTTGAAAATCTGACGACAAT+TGG + chr8_1:46504567-46504586 None:intergenic 30.0%
! AATTGTCGTCAGATTTTCAA+AGG - chr8_1:46504566-46504585 Msa1196820:intron 30.0%
AAAACATACCTTGGATATGT+AGG + chr8_1:46504620-46504639 None:intergenic 30.0%
CTATTTGTGAAGAGAAATCT+TGG - chr8_1:46504653-46504672 Msa1196820:intron 30.0%
TATTTGCAAAGATTTGCAAG+AGG + chr8_1:46505038-46505057 None:intergenic 30.0%
AAGATAAGATTGTCCACAAT+AGG - chr8_1:46505059-46505078 Msa1196820:intron 30.0%
! GTGCTTATATCATGGATTTT+TGG + chr8_1:46505120-46505139 None:intergenic 30.0%
TACATGCTATGGCAAAAAAA+TGG - chr8_1:46505153-46505172 Msa1196820:intron 30.0%
TTGTCAAATACCACCATTTA+TGG + chr8_1:46505230-46505249 None:intergenic 30.0%
! TAACATACCCTTTTCCAAAA+CGG - chr8_1:46505259-46505278 Msa1196820:intron 30.0%
!! TGCATTGGAATTTTGTTTGA+GGG + chr8_1:46505303-46505322 None:intergenic 30.0%
!! TTGCATTGGAATTTTGTTTG+AGG + chr8_1:46505304-46505323 None:intergenic 30.0%
AACAATAAAAAGGCAACAAG+AGG + chr8_1:46505522-46505541 None:intergenic 30.0%
! TTTTTGTGTTTACTTCCTCT+AGG - chr8_1:46505541-46505560 Msa1196820:intron 30.0%
!! TTTTGTTATAGTGGGATGAT+TGG - chr8_1:46505666-46505685 Msa1196820:intron 30.0%
TCAGAGTTGTAAAATTTGAG+TGG + chr8_1:46505783-46505802 None:intergenic 30.0%
! ACTCAAATTTTACAACTCTG+AGG - chr8_1:46505782-46505801 Msa1196820:intron 30.0%
AAAGAAAAAGGGAAATGCAA+AGG + chr8_1:46505825-46505844 None:intergenic 30.0%
! TGAATCTTCTCAGTTTTCTT+TGG + chr8_1:46505967-46505986 None:intergenic 30.0%
CGAGTAAAAGATATGAATGA+TGG + chr8_1:46506025-46506044 None:intergenic 30.0%
GATGAGTAACTGTTTATTTC+AGG - chr8_1:46506098-46506117 Msa1196820:CDS 30.0%
! GATTGAGATGCTTTCTTTTA+TGG - chr8_1:46506275-46506294 Msa1196820:five_prime_UTR 30.0%
! TTGAATGCTTTTGGTATCTT+AGG - chr8_1:46506317-46506336 Msa1196820:five_prime_UTR 30.0%
GTATCTTAGGTTCTTTCATT+TGG - chr8_1:46506330-46506349 Msa1196820:five_prime_UTR 30.0%
TAATATCCTAAGGCAGTGTT+TGG - chr8_1:46498661-46498680 Msa1196820:three_prime_UTR 35.0%
AATATCCTAAGGCAGTGTTT+GGG - chr8_1:46498662-46498681 Msa1196820:three_prime_UTR 35.0%
!! GATTTTGAGAAATGTGAGGT+GGG + chr8_1:46498710-46498729 None:intergenic 35.0%
TTATTAGCTAAGGCTCTGTT+TGG + chr8_1:46498848-46498867 None:intergenic 35.0%
ATCATCTCTTTGTCTCTTCA+TGG + chr8_1:46498939-46498958 None:intergenic 35.0%
GTTTCAACAATGGATGTTGA+AGG - chr8_1:46498983-46499002 Msa1196820:three_prime_UTR 35.0%
GATAAAGACCCAAATGGTAA+TGG - chr8_1:46499013-46499032 Msa1196820:three_prime_UTR 35.0%
GATGAAACACCATTACCATT+TGG + chr8_1:46499025-46499044 None:intergenic 35.0%
!! TTTCTGAAATTAGCCCAATG+TGG - chr8_1:46499062-46499081 Msa1196820:exon 35.0%
TATAGGTGTCAGTGATTCAT+AGG - chr8_1:46499536-46499555 Msa1196820:intron 35.0%
TGTCTCTGAGTGAAAAGATT+TGG - chr8_1:46499858-46499877 Msa1196820:intron 35.0%
GTCTCTGAGTGAAAAGATTT+GGG - chr8_1:46499859-46499878 Msa1196820:intron 35.0%
! TGAGTGAAAAGATTTGGGTT+TGG - chr8_1:46499864-46499883 Msa1196820:intron 35.0%
TTCAGAATCAGAGTGCAAAA+AGG + chr8_1:46499956-46499975 None:intergenic 35.0%
! TGCACTCTGATTCTGAAAAT+TGG - chr8_1:46499959-46499978 Msa1196820:intron 35.0%
ATTTCCAGTGTTGTAATTCG+CGG - chr8_1:46500116-46500135 Msa1196820:intron 35.0%
TGTCAAATAACAGCTACTGT+GGG + chr8_1:46500186-46500205 None:intergenic 35.0%
TTGTCAAATAACAGCTACTG+TGG + chr8_1:46500187-46500206 None:intergenic 35.0%
CATATGAACATGTGGTAGTT+TGG - chr8_1:46500379-46500398 Msa1196820:intron 35.0%
!!! AAGCGTTGATTTTGATCCAA+CGG + chr8_1:46500546-46500565 None:intergenic 35.0%
CAATCTGCATCAATGTGTAT+AGG + chr8_1:46500636-46500655 None:intergenic 35.0%
!! TCTCCATCTTGTCTTGTTTA+TGG + chr8_1:46500906-46500925 None:intergenic 35.0%
ATAAACAAGACAAGATGGAG+AGG - chr8_1:46500905-46500924 Msa1196820:intron 35.0%
TAAACAAGACAAGATGGAGA+GGG - chr8_1:46500906-46500925 Msa1196820:intron 35.0%
CAAAAGTGGAAACAATTTGG+TGG + chr8_1:46501165-46501184 None:intergenic 35.0%
TAGAAGCGATTCAAACGAAT+GGG + chr8_1:46501193-46501212 None:intergenic 35.0%
!! TGCATCAATCTTTTGAAGGT+TGG - chr8_1:46501393-46501412 Msa1196820:intron 35.0%
AAACCCATACAATGTTGAGA+CGG - chr8_1:46501509-46501528 Msa1196820:CDS 35.0%
AATGTTGAGACGGTGAAATA+CGG - chr8_1:46501519-46501538 Msa1196820:CDS 35.0%
! GTTTGTTGGTATTGTACAGA+AGG - chr8_1:46501608-46501627 Msa1196820:intron 35.0%
TTGTTGGTATTGTACAGAAG+GGG - chr8_1:46501610-46501629 Msa1196820:intron 35.0%
CAATAAATTTGAGCTCTCAC+CGG - chr8_1:46501776-46501795 Msa1196820:intron 35.0%
TGCTCTACATCTTAACTCTT+TGG - chr8_1:46501938-46501957 Msa1196820:CDS 35.0%
GCTCTACATCTTAACTCTTT+GGG - chr8_1:46501939-46501958 Msa1196820:CDS 35.0%
GTTTATTTGCAGTCACTGAA+AGG - chr8_1:46502096-46502115 Msa1196820:intron 35.0%
GAGAGGTTCAATGATAAAAG+GGG + chr8_1:46502159-46502178 None:intergenic 35.0%
!!! GCTCTGGAAGTATTTTTTAC+TGG - chr8_1:46502189-46502208 Msa1196820:CDS 35.0%
ACTAGTAAACTAGACCGATT+GGG + chr8_1:46502350-46502369 None:intergenic 35.0%
TACTAGTAAACTAGACCGAT+TGG + chr8_1:46502351-46502370 None:intergenic 35.0%
! AAAGGACTAACCTGGTATTT+TGG + chr8_1:46502478-46502497 None:intergenic 35.0%
TGAAACTTAAAGGACTAACC+TGG + chr8_1:46502486-46502505 None:intergenic 35.0%
! AGGTCCTTATTACCCTTTTA+AGG - chr8_1:46502509-46502528 Msa1196820:intron 35.0%
AGGTCCTTAAAAGGGTAATA+AGG + chr8_1:46502516-46502535 None:intergenic 35.0%
! CTTTTGCAGTCATCAACATA+TGG - chr8_1:46502986-46503005 Msa1196820:intron 35.0%
!! ATATGGCAAGGTTCTTGTTT+TGG - chr8_1:46503003-46503022 Msa1196820:intron 35.0%
AGTTATTCAGCTCACAGAAA+GGG - chr8_1:46503030-46503049 Msa1196820:intron 35.0%
ATGAGTGATCATTTCTTGGT+AGG + chr8_1:46503065-46503084 None:intergenic 35.0%
GAAGATGAGTGATCATTTCT+TGG + chr8_1:46503069-46503088 None:intergenic 35.0%
AGGCTGTTTGAGAAAACTTA+TGG - chr8_1:46503239-46503258 Msa1196820:intron 35.0%
! GTTGAGTTGTTTATCCAAAC+TGG - chr8_1:46503356-46503375 Msa1196820:intron 35.0%
GTGATTCACAACTGTGATTT+CGG - chr8_1:46503661-46503680 Msa1196820:intron 35.0%
CATCAAATTGCAGACAAATG+AGG + chr8_1:46503699-46503718 None:intergenic 35.0%
ACCGAGCAATCAAGAAAAAT+TGG + chr8_1:46503845-46503864 None:intergenic 35.0%
!! CTTCTAAAGTCTCACATGAT+TGG + chr8_1:46504082-46504101 None:intergenic 35.0%
CATTGTGAGAAAAGTCATCA+TGG + chr8_1:46504241-46504260 None:intergenic 35.0%
! CATGATGACTTTTCTCACAA+TGG - chr8_1:46504239-46504258 Msa1196820:intron 35.0%
! TCTAGGAGTTGCATTTTTGA+AGG - chr8_1:46504262-46504281 Msa1196820:intron 35.0%
ACACATGTAGCATACCAATA+GGG + chr8_1:46504334-46504353 None:intergenic 35.0%
TACACATGTAGCATACCAAT+AGG + chr8_1:46504335-46504354 None:intergenic 35.0%
!!! AAAGCCATTTTTTCAGTCAG+TGG - chr8_1:46504457-46504476 Msa1196820:intron 35.0%
!!! ATTTTTTCAGTCAGTGGCAA+GGG - chr8_1:46504463-46504482 Msa1196820:intron 35.0%
ATCACATGTTCAAGTCATAG+AGG - chr8_1:46504684-46504703 Msa1196820:intron 35.0%
TCACATGTTCAAGTCATAGA+GGG - chr8_1:46504685-46504704 Msa1196820:intron 35.0%
!!! CCTATTGTGGACCATTTTTT+TGG + chr8_1:46504989-46505008 None:intergenic 35.0%
CCAAAAAAATGGTCCACAAT+AGG - chr8_1:46504986-46505005 Msa1196820:intron 35.0%
! TCCACAATAGGTGTTATCAA+TGG - chr8_1:46505071-46505090 Msa1196820:intron 35.0%
! TAGGTGTTATCAATGGCAAA+TGG - chr8_1:46505078-46505097 Msa1196820:intron 35.0%
TGTTAGTGTGTTACATGCTA+TGG - chr8_1:46505142-46505161 Msa1196820:intron 35.0%
ATGCTATGGCAAAAAAATGG+CGG - chr8_1:46505156-46505175 Msa1196820:intron 35.0%
!! AAAAAAATGGCGGATACAGT+AGG - chr8_1:46505166-46505185 Msa1196820:intron 35.0%
!! AAAAAATGGCGGATACAGTA+GGG - chr8_1:46505167-46505186 Msa1196820:intron 35.0%
AAATACCACCATTTATGGCA+TGG + chr8_1:46505225-46505244 None:intergenic 35.0%
!!! CATATGACCGTTTTGGAAAA+GGG + chr8_1:46505269-46505288 None:intergenic 35.0%
!!! TCATATGACCGTTTTGGAAA+AGG + chr8_1:46505270-46505289 None:intergenic 35.0%
!! GCATTGGAATTTTGTTTGAG+GGG + chr8_1:46505302-46505321 None:intergenic 35.0%
! TTGACAACACTAGTTTGCAT+TGG + chr8_1:46505318-46505337 None:intergenic 35.0%
TTCAATGCAATACTAGTGCT+TGG - chr8_1:46505457-46505476 Msa1196820:intron 35.0%
!!! TACCACTCTTTTTTGTGTTG+AGG - chr8_1:46505599-46505618 Msa1196820:intron 35.0%
AACCTCAACACAAAAAAGAG+TGG + chr8_1:46505604-46505623 None:intergenic 35.0%
! GGATGTTTGAAATCAACAAG+AGG + chr8_1:46505717-46505736 None:intergenic 35.0%
! TTTTCATCCATAGGATTCAC+TGG + chr8_1:46505738-46505757 None:intergenic 35.0%
! TGACATTCGTTTTCATCCAT+AGG + chr8_1:46505747-46505766 None:intergenic 35.0%
AAAAAGGGAAATGCAAAGGA+TGG + chr8_1:46505821-46505840 None:intergenic 35.0%
! CAGTATGAATCTGGAATTGA+AGG + chr8_1:46505902-46505921 None:intergenic 35.0%
CAGGATAATGACAAAGTTGA+TGG - chr8_1:46506117-46506136 Msa1196820:CDS 35.0%
AGCAATGAGATTGAAAGTCT+AGG - chr8_1:46506376-46506395 Msa1196820:five_prime_UTR 35.0%
!! AATGTGAGGTGGGTTTTGAT+TGG + chr8_1:46498700-46498719 None:intergenic 40.0%
!! CGATTTTGAGAAATGTGAGG+TGG + chr8_1:46498711-46498730 None:intergenic 40.0%
!! GGAAAGGAATCTGCTTTTGA+TGG + chr8_1:46498737-46498756 None:intergenic 40.0%
ATCTCTTTGTCTCTTCATGG+AGG + chr8_1:46498936-46498955 None:intergenic 40.0%
TGGGGTTTCTGTTTCAACAA+TGG - chr8_1:46498973-46498992 Msa1196820:three_prime_UTR 40.0%
TCAACAATGGATGTTGAAGG+TGG - chr8_1:46498986-46499005 Msa1196820:three_prime_UTR 40.0%
GTGTTTCATCTGTGATTCCT+GGG - chr8_1:46499035-46499054 Msa1196820:three_prime_UTR 40.0%
CTAATTTCAGAAAACCACCC+AGG + chr8_1:46499055-46499074 None:intergenic 40.0%
AAAACTAACCAGGCCACATT+GGG + chr8_1:46499078-46499097 None:intergenic 40.0%
AAAAACTAACCAGGCCACAT+TGG + chr8_1:46499079-46499098 None:intergenic 40.0%
! CTCAATACCCTTTTGCATGT+TGG - chr8_1:46499111-46499130 Msa1196820:CDS 40.0%
! ACGTCTTCAATGAGAAGTGT+CGG + chr8_1:46499190-46499209 None:intergenic 40.0%
GTTGTTTACAGTGTTTGCGT+TGG - chr8_1:46499279-46499298 Msa1196820:CDS 40.0%
!! TGTTTGCGTTGGTGATTCAT+TGG - chr8_1:46499290-46499309 Msa1196820:CDS 40.0%
!! GGTGATTCATTGGCTTGAAA+AGG - chr8_1:46499300-46499319 Msa1196820:CDS 40.0%
GAATCACTGACACCTATACA+CGG + chr8_1:46499534-46499553 None:intergenic 40.0%
TGATTCATAGGTTTAGCTGC+TGG - chr8_1:46499548-46499567 Msa1196820:intron 40.0%
GATTCATAGGTTTAGCTGCT+GGG - chr8_1:46499549-46499568 Msa1196820:intron 40.0%
AGACAAACTCCACATCTATG+AGG + chr8_1:46499843-46499862 None:intergenic 40.0%
AGAATCAGAGTGCAAAAAGG+TGG + chr8_1:46499953-46499972 None:intergenic 40.0%
TACATGCCAAGCAAACATCA+GGG + chr8_1:46500025-46500044 None:intergenic 40.0%
GTCAAATAACAGCTACTGTG+GGG + chr8_1:46500185-46500204 None:intergenic 40.0%
!! GTGGTAGTTTGGCTTACTTT+TGG - chr8_1:46500390-46500409 Msa1196820:intron 40.0%
! TAGAGGGCATATCAAATGAG+AGG - chr8_1:46500491-46500510 Msa1196820:CDS 40.0%
AGAGGAGTAGTTAGAATGAG+AGG - chr8_1:46500509-46500528 Msa1196820:CDS 40.0%
!! GGTCTTGTTATAGCTGGAAT+CGG + chr8_1:46500685-46500704 None:intergenic 40.0%
AAACAAGACAAGATGGAGAG+GGG - chr8_1:46500907-46500926 Msa1196820:intron 40.0%
GAGATTAAAGCAGCGTTTCT+GGG + chr8_1:46500959-46500978 None:intergenic 40.0%
GACACCGGAGAATAGTAAAA+TGG + chr8_1:46500999-46501018 None:intergenic 40.0%
TATATATGCGAACAGGACAC+CGG + chr8_1:46501014-46501033 None:intergenic 40.0%
! AGTGGAAACAATTTGGTGGA+GGG + chr8_1:46501161-46501180 None:intergenic 40.0%
! AAGTGGAAACAATTTGGTGG+AGG + chr8_1:46501162-46501181 None:intergenic 40.0%
AGAAGCGATTCAAACGAATG+GGG + chr8_1:46501192-46501211 None:intergenic 40.0%
GTAGAAGCGATTCAAACGAA+TGG + chr8_1:46501194-46501213 None:intergenic 40.0%
TCACCGTCTCAACATTGTAT+GGG + chr8_1:46501515-46501534 None:intergenic 40.0%
TTCACCGTCTCAACATTGTA+TGG + chr8_1:46501516-46501535 None:intergenic 40.0%
GACATCACAGTGTTTAGATC+TGG - chr8_1:46501560-46501579 Msa1196820:intron 40.0%
TGCTATGAAACAAAGACGTG+CGG - chr8_1:46501586-46501605 Msa1196820:intron 40.0%
TACAGAAGGGGATGTCAATA+GGG - chr8_1:46501622-46501641 Msa1196820:intron 40.0%
CCAGAGCTTAAGAATTAGAG+AGG + chr8_1:46502176-46502195 None:intergenic 40.0%
CCTCTCTAATTCTTAAGCTC+TGG - chr8_1:46502173-46502192 Msa1196820:CDS 40.0%
!! CAAAGCATTGCCAAAATACC+AGG - chr8_1:46502465-46502484 Msa1196820:intron 40.0%
AAACCTGGTTGTAACTTTGC+AGG - chr8_1:46502795-46502814 Msa1196820:intron 40.0%
GTCAGATTACCAGAAAGTCA+TGG - chr8_1:46502863-46502882 Msa1196820:intron 40.0%
TTACTTGAACCTCATGTACC+TGG + chr8_1:46502893-46502912 None:intergenic 40.0%
GATGACTGCAAAAGACATCA+TGG + chr8_1:46502980-46502999 None:intergenic 40.0%
GAGTTATTCAGCTCACAGAA+AGG - chr8_1:46503029-46503048 Msa1196820:intron 40.0%
!! CTCTATTTCTGAGCCCAAAA+AGG - chr8_1:46503096-46503115 Msa1196820:intron 40.0%
GTCTGTAAGTGCTTATTTGC+TGG - chr8_1:46503202-46503221 Msa1196820:intron 40.0%
!!! TAGGTTTTGGTTATTGGTGG+AGG - chr8_1:46503478-46503497 Msa1196820:intron 40.0%
GTTACTTAGCTTAGGACCTT+AGG + chr8_1:46503628-46503647 None:intergenic 40.0%
GACAAATGAGGTAGCCATTA+CGG + chr8_1:46503687-46503706 None:intergenic 40.0%
! TTTTTCCCTGAAGTTGCAGT+AGG - chr8_1:46503925-46503944 Msa1196820:intron 40.0%
! TTTTCCCTGAAGTTGCAGTA+GGG - chr8_1:46503926-46503945 Msa1196820:intron 40.0%
TAAACCCTACTGCAACTTCA+GGG + chr8_1:46503933-46503952 None:intergenic 40.0%
TTAAACCCTACTGCAACTTC+AGG + chr8_1:46503934-46503953 None:intergenic 40.0%
!! GATTGGTTGTGATTTGCTGA+TGG + chr8_1:46504065-46504084 None:intergenic 40.0%
! GACTTTTCTCACAATGGTCT+AGG - chr8_1:46504245-46504264 Msa1196820:intron 40.0%
ACTGCATCATAAGTTCCTTC+TGG + chr8_1:46504293-46504312 None:intergenic 40.0%
! CTTGCCACTGACTGAAAAAA+TGG + chr8_1:46504464-46504483 None:intergenic 40.0%
!!! CATTTTTTCAGTCAGTGGCA+AGG - chr8_1:46504462-46504481 Msa1196820:intron 40.0%
AAGGCTCTGTCAATTATGCT+TGG - chr8_1:46504585-46504604 Msa1196820:intron 40.0%
CTACAGTTCCTACATATCCA+AGG - chr8_1:46504609-46504628 Msa1196820:intron 40.0%
! TCCACAATAGGTGTCATCAA+TGG - chr8_1:46504998-46505017 Msa1196820:intron 40.0%
! GCCATTGATAACACCTATTG+TGG + chr8_1:46505075-46505094 None:intergenic 40.0%
GTGTTATCAATGGCAAATGG+CGG - chr8_1:46505081-46505100 Msa1196820:intron 40.0%
CTAACACCGTGCTTATATCA+TGG + chr8_1:46505128-46505147 None:intergenic 40.0%
!! AAAAATGGCGGATACAGTAG+GGG - chr8_1:46505168-46505187 Msa1196820:intron 40.0%
! TTACCAGGTGCTATAGATCA+CGG + chr8_1:46505194-46505213 None:intergenic 40.0%
AAAATCCGCCATGCCATAAA+TGG - chr8_1:46505214-46505233 Msa1196820:intron 40.0%
CAATACTAGTGCTTGGAGTT+AGG - chr8_1:46505464-46505483 Msa1196820:intron 40.0%
!! TTTACTTCCTCTAGGACGTT+AGG - chr8_1:46505549-46505568 Msa1196820:intron 40.0%
! TCTAAAACCTAACGTCCTAG+AGG + chr8_1:46505559-46505578 None:intergenic 40.0%
! TTTTATGCTTTGCTCAACCG+AGG - chr8_1:46505689-46505708 Msa1196820:intron 40.0%
TTTATGCTTTGCTCAACCGA+GGG - chr8_1:46505690-46505709 Msa1196820:intron 40.0%
CAAACATCCAGTGAATCCTA+TGG - chr8_1:46505728-46505747 Msa1196820:intron 40.0%
AGAAAGCTGCAGTATGAATC+TGG + chr8_1:46505911-46505930 None:intergenic 40.0%
ATCTTCCTCTTCGCAAATGA+CGG + chr8_1:46505939-46505958 None:intergenic 40.0%
TCATTTGCGAAGAGGAAGAT+TGG - chr8_1:46505939-46505958 Msa1196820:intron 40.0%
CAACGAACCATGGAATAAGT+TGG - chr8_1:46506058-46506077 Msa1196820:CDS 40.0%
TTAGGCACCAACTTATTCCA+TGG + chr8_1:46506068-46506087 None:intergenic 40.0%
GTGAGACTAGTGGAATGGAA+AGG + chr8_1:46498753-46498772 None:intergenic 45.0%
TATGGGTGAGACTAGTGGAA+TGG + chr8_1:46498758-46498777 None:intergenic 45.0%
TGTTGTATGGGTGAGACTAG+TGG + chr8_1:46498763-46498782 None:intergenic 45.0%
ACAATGGATGTTGAAGGTGG+TGG - chr8_1:46498989-46499008 Msa1196820:three_prime_UTR 45.0%
GGTGGTGATAAAGACCCAAA+TGG - chr8_1:46499007-46499026 Msa1196820:three_prime_UTR 45.0%
GGTGTTTCATCTGTGATTCC+TGG - chr8_1:46499034-46499053 Msa1196820:three_prime_UTR 45.0%
TTTCATCTGTGATTCCTGGG+TGG - chr8_1:46499038-46499057 Msa1196820:three_prime_UTR 45.0%
CTTCTCATTGAAGACGTGTC+TGG - chr8_1:46499193-46499212 Msa1196820:intron 45.0%
ATAGGTTTAGCTGCTGGGAA+AGG - chr8_1:46499554-46499573 Msa1196820:intron 45.0%
! GTTTTTGCACGGACACTTCT+TGG - chr8_1:46499665-46499684 Msa1196820:intron 45.0%
ACACTTCTTGGCTTAGGTGT+CGG - chr8_1:46499677-46499696 Msa1196820:intron 45.0%
!!! TTGGCTTAGGTGTCGGTTTT+TGG - chr8_1:46499684-46499703 Msa1196820:intron 45.0%
!!! TGGCTTAGGTGTCGGTTTTT+GGG - chr8_1:46499685-46499704 Msa1196820:intron 45.0%
!! TATAAGTGTCGGTGTCGTGT+CGG + chr8_1:46499730-46499749 None:intergenic 45.0%
AACTCCACATCTATGAGGCA+CGG + chr8_1:46499838-46499857 None:intergenic 45.0%
GTACATGCCAAGCAAACATC+AGG + chr8_1:46500026-46500045 None:intergenic 45.0%
TGATCCGCGAATTACAACAC+TGG + chr8_1:46500123-46500142 None:intergenic 45.0%
ACATCGGCACTATATCCTAG+AGG + chr8_1:46500260-46500279 None:intergenic 45.0%
AGAGGATTAATCTGGACCGT+TGG - chr8_1:46500527-46500546 Msa1196820:CDS 45.0%
TCAATGTGTATAGGCGAGAG+TGG + chr8_1:46500627-46500646 None:intergenic 45.0%
AACAAGACAAGATGGAGAGG+GGG - chr8_1:46500908-46500927 Msa1196820:intron 45.0%
CGAGATTAAAGCAGCGTTTC+TGG + chr8_1:46500960-46500979 None:intergenic 45.0%
! GTGGAAACAATTTGGTGGAG+GGG + chr8_1:46501160-46501179 None:intergenic 45.0%
ACGAATGGGGAAGACAAAAG+TGG + chr8_1:46501179-46501198 None:intergenic 45.0%
TCGCTTCTACCTTTCTTCCA+TGG - chr8_1:46501204-46501223 Msa1196820:intron 45.0%
CAGCAACAGGTTTCACAACT+TGG - chr8_1:46501306-46501325 Msa1196820:intron 45.0%
AACAAAGACGTGCGGTTTGT+TGG - chr8_1:46501594-46501613 Msa1196820:intron 45.0%
GTACAGAAGGGGATGTCAAT+AGG - chr8_1:46501621-46501640 Msa1196820:intron 45.0%
TAGGGTTGACTGAGTGATAG+TGG - chr8_1:46501640-46501659 Msa1196820:intron 45.0%
!! GTTGACTGAGTGATAGTGGA+AGG - chr8_1:46501644-46501663 Msa1196820:intron 45.0%
!! TGATAGTGGAAGGAGGTAAG+AGG - chr8_1:46501654-46501673 Msa1196820:intron 45.0%
!! GATAGTGGAAGGAGGTAAGA+GGG - chr8_1:46501655-46501674 Msa1196820:intron 45.0%
AGGTAAGAGGGAGAATTGAG+TGG - chr8_1:46501667-46501686 Msa1196820:intron 45.0%
TAAGAGGGAGAATTGAGTGG+AGG - chr8_1:46501670-46501689 Msa1196820:intron 45.0%
! GTATGTATAGGGAGCGTATC+CGG + chr8_1:46501798-46501817 None:intergenic 45.0%
TACCAATCCTAGGACCCAAT+CGG - chr8_1:46502333-46502352 Msa1196820:intron 45.0%
TCTCCTGCAAAGTTACAACC+AGG + chr8_1:46502801-46502820 None:intergenic 45.0%
GCAGTCATCAACATATGGCA+AGG - chr8_1:46502991-46503010 Msa1196820:intron 45.0%
!!! GGCAAGGTTCTTGTTTTGGA+TGG - chr8_1:46503007-46503026 Msa1196820:intron 45.0%
GGCTCAGAAATAGAGCAAAG+AGG + chr8_1:46503091-46503110 None:intergenic 45.0%
TTGGTTATTGGTGGAGGTGA+TGG - chr8_1:46503484-46503503 Msa1196820:intron 45.0%
AACTGTGATTTCGGCCGTAA+TGG - chr8_1:46503670-46503689 Msa1196820:intron 45.0%
TAGAAGTCCTGACTTTGTGC+AGG - chr8_1:46503891-46503910 Msa1196820:intron 45.0%
TTGGAAACCTGCACAAAGTC+AGG + chr8_1:46503901-46503920 None:intergenic 45.0%
!! TTTTTGAAGGCAGCTCCAGA+AGG - chr8_1:46504275-46504294 Msa1196820:intron 45.0%
GTGGATTCATCTGACCCTAT+TGG - chr8_1:46504317-46504336 Msa1196820:intron 45.0%
! TTTTCGAAAAGCTGCTGAGC+AGG + chr8_1:46504440-46504459 None:intergenic 45.0%
! GCACTCAGGCTGAAAGTATA+TGG - chr8_1:46504510-46504529 Msa1196820:intron 45.0%
! GCCATTGATGACACCTATTG+TGG + chr8_1:46505002-46505021 None:intergenic 45.0%
!! CAATGGCAAATGGCGGATTA+CGG - chr8_1:46505088-46505107 Msa1196820:intron 45.0%
TACCACCATTTATGGCATGG+CGG + chr8_1:46505222-46505241 None:intergenic 45.0%
TTGTCAATTGCGAATCGCAG+AGG - chr8_1:46505331-46505350 Msa1196820:intron 45.0%
GAAATCAACAAGAGGTCCCT+CGG + chr8_1:46505709-46505728 None:intergenic 45.0%
AGGGAAATGCAAAGGATGGT+TGG + chr8_1:46505817-46505836 None:intergenic 45.0%
GGTCATCTATCAACGAACCA+TGG - chr8_1:46506048-46506067 Msa1196820:CDS 45.0%
CATAGGCGGTCATGTTTATG+AGG + chr8_1:46506163-46506182 None:intergenic 45.0%
! TCTTTTATGGTCTGTGCCTG+TGG - chr8_1:46506288-46506307 Msa1196820:five_prime_UTR 45.0%
! TGGCGTGTCTTGAATGCTTT+TGG - chr8_1:46506308-46506327 Msa1196820:five_prime_UTR 45.0%
! GCTAAGGCTCTGTTTGGCTT+TGG + chr8_1:46498842-46498861 None:intergenic 50.0%
! TGCAGAGAGTATGGTGGAAC+TGG - chr8_1:46498907-46498926 Msa1196820:three_prime_UTR 50.0%
GAAATTAGCCCAATGTGGCC+TGG - chr8_1:46499067-46499086 Msa1196820:CDS 50.0%
!! ATGAGAAGTGTCGGTGCTAC+TGG + chr8_1:46499181-46499200 None:intergenic 50.0%
TGTCTGCAGTGTCCGTGTAT+AGG - chr8_1:46499519-46499538 Msa1196820:intron 50.0%
TATGAGGCACGGATACGACA+CGG + chr8_1:46499827-46499846 None:intergenic 50.0%
GTATCCGTGCCTCATAGATG+TGG - chr8_1:46499831-46499850 Msa1196820:intron 50.0%
CACGTTCCCTGATGTTTGCT+TGG - chr8_1:46500016-46500035 Msa1196820:intron 50.0%
GCGAGAGTGGAGAAGATGAA+AGG + chr8_1:46500614-46500633 None:intergenic 50.0%
!! GACTGAGTGATAGTGGAAGG+AGG - chr8_1:46501647-46501666 Msa1196820:intron 50.0%
AACTAGACCGATTGGGTCCT+AGG + chr8_1:46502343-46502362 None:intergenic 50.0%
CCTGGAAGACCATGACTTTC+TGG + chr8_1:46502875-46502894 None:intergenic 50.0%
CCAGAAAGTCATGGTCTTCC+AGG - chr8_1:46502872-46502891 Msa1196820:intron 50.0%
CATGGTCTTCCAGGTACATG+AGG - chr8_1:46502881-46502900 Msa1196820:intron 50.0%
TGCTGGCATAAACACTTGCG+AGG - chr8_1:46503219-46503238 Msa1196820:intron 50.0%
! GTTATTGGTGGAGGTGATGG+AGG - chr8_1:46503487-46503506 Msa1196820:intron 50.0%
!! AATGACGTGCTACTTCTCGC+AGG + chr8_1:46503516-46503535 None:intergenic 50.0%
ATCCTAATGCGACTGTGACC+AGG - chr8_1:46503730-46503749 Msa1196820:intron 50.0%
CAATGCGAAGAGTCACACGT+GGG + chr8_1:46503960-46503979 None:intergenic 50.0%
! GTGACTCTTCGCATTGGTGA+TGG - chr8_1:46503964-46503983 Msa1196820:intron 50.0%
TGAGTGCACATAACTCCTCC+TGG + chr8_1:46504497-46504516 None:intergenic 50.0%
AGGAGGAGTTATGTGCACTC+AGG - chr8_1:46504496-46504515 Msa1196820:intron 50.0%
!!! GGCATGGCGGATTTTTTACC+AGG + chr8_1:46505209-46505228 None:intergenic 50.0%
ATCCGCCATGCCATAAATGG+TGG - chr8_1:46505217-46505236 Msa1196820:intron 50.0%
TTGCGAATCGCAGAGGATAG+TGG - chr8_1:46505338-46505357 Msa1196820:intron 50.0%
! CGCAGAGGATAGTGGTTTGT+TGG - chr8_1:46505346-46505365 Msa1196820:intron 50.0%
GTTTGCCGTCATTTGCGAAG+AGG - chr8_1:46505931-46505950 Msa1196820:intron 50.0%
AGAGCTCAAAGTAGCTCACG+TGG - chr8_1:46505989-46506008 Msa1196820:CDS 50.0%
AAGCATTCAAGACACGCCAC+AGG + chr8_1:46506307-46506326 None:intergenic 50.0%
GGGTTCCCAAACACTGCCTT+AGG + chr8_1:46498670-46498689 None:intergenic 55.0%
!! AGGCTCTGTTTGGCTTTGGC+TGG + chr8_1:46498838-46498857 None:intergenic 55.0%
CATGGCTGCTGCAGAGAGTA+TGG - chr8_1:46498898-46498917 Msa1196820:three_prime_UTR 55.0%
GCACGGACACTTCTTGGCTT+AGG - chr8_1:46499671-46499690 Msa1196820:intron 55.0%
TAACAGCTACTGTGGGGCTG+TGG + chr8_1:46500179-46500198 None:intergenic 55.0%
AAGATGGAGAGGGGGAGAGA+CGG - chr8_1:46500916-46500935 Msa1196820:intron 55.0%
GACCGATTGGGTCCTAGGAT+TGG + chr8_1:46502338-46502357 None:intergenic 55.0%
GTCCTGGTCACAGTCGCATT+AGG + chr8_1:46503735-46503754 None:intergenic 55.0%
CCAATGCGAAGAGTCACACG+TGG + chr8_1:46503961-46503980 None:intergenic 55.0%
CCACGTGTGACTCTTCGCAT+TGG - chr8_1:46503958-46503977 Msa1196820:intron 55.0%
AGCTGCTGAGCAGGACCTTA+AGG + chr8_1:46504431-46504450 None:intergenic 55.0%
! GGCTGCTGCAGAGAGTATGG+TGG - chr8_1:46498901-46498920 Msa1196820:three_prime_UTR 60.0%
!! TGTCGGTGTCGTGTCGGTGT+TGG + chr8_1:46499724-46499743 None:intergenic 60.0%
GTCTGTGTGCGTGTCGTGTC+CGG - chr8_1:46499798-46499817 Msa1196820:intron 60.0%
CACGGATACGACACGGACAC+CGG + chr8_1:46499820-46499839 None:intergenic 60.0%
GGGCCGTGATCTATAGCACC+TGG - chr8_1:46505188-46505207 Msa1196820:intron 60.0%
GTGGCAAGGGCTCTTCGTCC+AGG - chr8_1:46504476-46504495 Msa1196820:intron 65.0%
GCAAGGGCTCTTCGTCCAGG+AGG - chr8_1:46504479-46504498 Msa1196820:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 46498620 46506422 46498620 ID=Msa1196820;Name=Msa1196820
chr8_1 mRNA 46498620 46506422 46498620 ID=Msa1196820-mRNA-1;Parent=Msa1196820;Name=Msa1196820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=279|1|1|1|1|1|9|445|342
chr8_1 exon 46498620 46499130 46498620 ID=Msa1196820-mRNA-1:exon:14838;Parent=Msa1196820-mRNA-1
chr8_1 exon 46499239 46499365 46499239 ID=Msa1196820-mRNA-1:exon:14837;Parent=Msa1196820-mRNA-1
chr8_1 exon 46500412 46500607 46500412 ID=Msa1196820-mRNA-1:exon:14836;Parent=Msa1196820-mRNA-1
chr8_1 exon 46500704 46500775 46500704 ID=Msa1196820-mRNA-1:exon:14835;Parent=Msa1196820-mRNA-1
chr8_1 exon 46501057 46501129 46501057 ID=Msa1196820-mRNA-1:exon:14834;Parent=Msa1196820-mRNA-1
chr8_1 exon 46501457 46501561 46501457 ID=Msa1196820-mRNA-1:exon:14833;Parent=Msa1196820-mRNA-1
chr8_1 exon 46501925 46502047 46501925 ID=Msa1196820-mRNA-1:exon:14832;Parent=Msa1196820-mRNA-1
chr8_1 exon 46502149 46502225 46502149 ID=Msa1196820-mRNA-1:exon:14831;Parent=Msa1196820-mRNA-1
chr8_1 exon 46505954 46506422 46505954 ID=Msa1196820-mRNA-1:exon:14830;Parent=Msa1196820-mRNA-1
chr8_1 five_prime_UTR 46506144 46506422 46506144 ID=Msa1196820-mRNA-1:five_prime_utr;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46505954 46506143 46505954 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46502149 46502225 46502149 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46501925 46502047 46501925 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46501457 46501561 46501457 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46501057 46501129 46501057 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46500704 46500775 46500704 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46500412 46500607 46500412 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46499239 46499365 46499239 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 CDS 46499065 46499130 46499065 ID=Msa1196820-mRNA-1:cds;Parent=Msa1196820-mRNA-1
chr8_1 three_prime_UTR 46498620 46499064 46498620 ID=Msa1196820-mRNA-1:three_prime_utr;Parent=Msa1196820-mRNA-1
Gene Sequence

>Msa1196820

ATGGCTGCTGCAGAGAGTATGGTGGAACTGGAATCCTCCATGAAGAGACAAAGAGATGATGAAGAAGAGAATAATGGGGTTTCTGTTTCAACAATGGATGTTGAAGGTGGTGGTGATAAAGACCCAAATGGTAATGGTGTTTCATCTGTGATTCCTGGGTGGTTTTCTGAAATTAGCCCAATGTGGCCTGGAGAAGCTCACTCCTTGAAGATAGAAAAGATTTTGTTTCAAGGAAAGTCAGATTACCAGAAAGTCATGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTGTTTTGGATGGAGTTATTCAGCTCACAGAAAGGGACGAATGTGCCTACCAAGAAATGATCACTCATCTTCCTCTTTGCTCTATTTCTGAGCCCAAAAAGGTTTTGGTTATTGGTGGAGGTGATGGAGGAGTCCTGCGAGAAGTAGCACGTCATTCTTCAATTGAAAAGATAGACATTTGTGAAATTGACAATATGGTCGTTGAAGTTTCCAAACAATTTTTCCCTGAAGTTGCAGTAGGGTTTAACGACCCACGTGTGACTCTTCGCATTGGTGATGGAGTTGCATTTTTGAAGGCAGCTCCAGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGACCCTATTGGTCCTGCTCAGCAGCTTTTCGAAAAGCCATTTTTTCAGTCAGTGGCAAGGGCTCTTCGTCCAGGAGGAGTTATGTGCACTCAGGCTGAAAGTATATGGCTTCATATGGATATAATTGAGGACATTGTGTCCAATTGTCGTCAGATTTTCAAAGGCTCTGTCAATTATGCTTGGACTACAGTTCCTACATATCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACCGAGGGACCTCTTGTTGATTTCAAACATCCAGTGAATCCTATGGATGAAAACGAATGTCAGAAGTCAGTAAGACCACTCAAATTTTACAACTCTGAGATTCATACTGCAGCTTTCTGTTTGCCGTCATTTGCGAAGAGGAAGATTGGTTCCAAAGAAAACTGA
Protein sequence

>Msa1196820

MAAAESMVELESSMKRQRDDEEENNGVSVSTMDVEGGGDKDPNGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISEPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFNDPRVTLRIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQQLFEKPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPLVDFKHPVNPMDENECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSKEN*