AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0086090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086090 MtrunA17_Chr1g0201791 80.208 288 24 5 1 286 1 257 9.38e-66 206
Msa0086090 MtrunA17_Chr6g0464351 70.330 91 27 0 195 285 20 110 5.21e-18 77.8
Msa0086090 MtrunA17_Chr6g0472131 69.231 91 25 1 195 285 20 107 1.26e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 106 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTCTCAATAAAATTCTT+TGG 0.247733 1_2:-66676253 Msa0086090:three_prime_UTR
AAGAAGAAACACCATTTCTT+TGG 0.248898 1_2:-66676565 Msa0086090:CDS
CTTATAATTAATTATGCTTT+TGG 0.268011 1_2:-66676464 Msa0086090:three_prime_UTR
CCATGAGCATCATGAGAAAA+AGG 0.283151 1_2:-66676620 Msa0086090:CDS
TTGTGCCTGTGAGCGTTCTC+TGG 0.290296 1_2:+66676697 None:intergenic
GGCGGATATGGTGGTGGTTA+TGG 0.297675 1_2:-66678000 Msa0086090:CDS
CCAGTTTGCTTTGAGTGGTT+TGG 0.300019 1_2:-66676408 Msa0086090:three_prime_UTR
ACCACCACCGGTGGTGGTTT+TGG 0.301983 1_2:+66677867 None:intergenic
TCCGCCACCCGTGGTTGTTT+TGG 0.307495 1_2:+66678017 None:intergenic
ACAACCACGGGTGGCGGATA+TGG 0.315139 1_2:-66678012 Msa0086090:CDS
GGCGGCTACGGCGGTGGTTA+TGG 0.318700 1_2:-66678099 Msa0086090:CDS
ATAAGCACACAAGCATATTA+TGG 0.324795 1_2:-66676512 Msa0086090:three_prime_UTR
GCCGCCACCAGTGGTTGTTT+TGG 0.330964 1_2:+66678116 None:intergenic
GGCGGCTACGGTGGTGGATA+TGG 0.331422 1_2:-66677901 Msa0086090:CDS
GGTGGCTACGGTGGTGGTTA+TGG 0.331534 1_2:-66678051 Msa0086090:CDS
GGCGGCTACGGTGGTGGTTA+TGG 0.343719 1_2:-66677952 Msa0086090:CDS
GATGAGCATCTTGGTGAGTT+AGG 0.348193 1_2:-66677784 Msa0086090:CDS
ACAGGTGATGACTATGATTC+TGG 0.353087 1_2:-66678297 Msa0086090:CDS
ACCACCACCGGTGGTGGTTA+TGG 0.357161 1_2:-66677862 Msa0086090:CDS
GTAGCCACCACCAGTGGTTT+TGG 0.366481 1_2:+66678065 None:intergenic
GGAGGAAGAAGAGGAAGCTC+AGG 0.381463 1_2:-66676590 Msa0086090:CDS
TCATATGGTAATGACAATTC+TGG 0.390159 1_2:-66678213 Msa0086090:CDS
CCAAACCACTCAAAGCAAAC+TGG 0.402796 1_2:+66676408 None:intergenic
ACTGATAAGTACACAATATA+CGG 0.407792 1_2:-66676330 Msa0086090:three_prime_UTR
GAAGCAGCTGCAGTGGGATC+TGG 0.415672 1_2:-66676655 Msa0086090:CDS
TACTCTAATAATGAAACATC+TGG 0.429220 1_2:-66678150 Msa0086090:CDS
GGTTACAATAAAACATCATA+TGG 0.436340 1_2:-66678228 Msa0086090:CDS
TCTGGTGGTGACTATGAAAC+TGG 0.450209 1_2:-66678195 Msa0086090:CDS
ATCTTCCAGTTTGCTTTGAG+TGG 0.452238 1_2:-66676413 Msa0086090:three_prime_UTR
TAACCACTGTCAGTGTCTAT+AGG 0.455188 1_2:+66678339 None:intergenic
CATATGTTCATCCAAAGAAA+TGG 0.455940 1_2:+66676554 None:intergenic
ACTGGTGGCGGCTACGGCGG+TGG 0.456265 1_2:-66678105 Msa0086090:CDS
GAGTTAGGTGCTGCAGCTGC+CGG 0.467505 1_2:-66677769 Msa0086090:CDS
ACAACCACTGGTGGCGGCTA+CGG 0.469364 1_2:-66678111 Msa0086090:CDS
ACTGGAGGCGGCTACGGTGG+TGG 0.471438 1_2:-66677907 Msa0086090:CDS
ACCACTGGCGGCTACGGTGG+TGG 0.476187 1_2:-66677958 Msa0086090:CDS
GGAAACAAAGGAGGAAGAAG+AGG 0.476387 1_2:-66676599 Msa0086090:CDS
TACAATGATGACCAGCCATC+TGG 0.494200 1_2:-66678255 Msa0086090:CDS
ACCAAAACAACCACGGGTGG+CGG 0.495591 1_2:-66678018 Msa0086090:CDS
AGTTGCAGAAGCAGCTGCAG+TGG 0.498157 1_2:-66676662 Msa0086090:CDS
ACCAAAACCACCACCGGTGG+TGG 0.498197 1_2:-66677868 Msa0086090:CDS
GCCAAAACAACCACTGGTGG+CGG 0.500275 1_2:-66678117 Msa0086090:CDS
AAAACAACCACTGGCGGCTA+CGG 0.502509 1_2:-66677964 Msa0086090:CDS
CACAGCAAAGATGAGCATCT+TGG 0.504810 1_2:-66677793 Msa0086090:CDS
TTTGGAGAATGTTTCCAGCT+TGG 0.505186 1_2:-66676390 Msa0086090:three_prime_UTR
ACTGGTGGTGGCTACGGTGG+TGG 0.506091 1_2:-66678057 Msa0086090:CDS
CATCATCATGCTTCTTGTGA+TGG 0.509136 1_2:+66678373 None:intergenic
TGTGCCTGTGAGCGTTCTCT+GGG 0.510366 1_2:+66676698 None:intergenic
AACAAAACATCATACTCTAC+AGG 0.515763 1_2:-66678315 Msa0086090:CDS
ACCATAACCACCACCGGTGG+TGG 0.516051 1_2:+66677861 None:intergenic
GTGTCATATAGATGTATGTA+TGG 0.517700 1_2:-66676368 Msa0086090:three_prime_UTR
ACAACCACTGGAGGCGGCTA+CGG 0.519220 1_2:-66677913 Msa0086090:CDS
GACACCAAAACCACTGGTGG+TGG 0.521255 1_2:-66678069 Msa0086090:CDS
ACCACGGGTGGCGGATATGG+TGG 0.535025 1_2:-66678009 Msa0086090:CDS
AAAACCACTGGTGGTGGCTA+CGG 0.535946 1_2:-66678063 Msa0086090:CDS
GCAGCTGCAGTGGGATCTGG+TGG 0.536922 1_2:-66676652 Msa0086090:CDS
AATGAAACATCTGGTGGCTA+TGG 0.540775 1_2:-66678141 Msa0086090:CDS
GATGGAAGAGGCCACGGCTA+CGG 0.545278 1_2:+66678391 None:intergenic
GACTCTGACACCAAAACCAC+TGG 0.545560 1_2:-66678075 Msa0086090:CDS
GTTGCAGAAGCAGCTGCAGT+GGG 0.546096 1_2:-66676661 Msa0086090:CDS
TTAGGTGCTGCAGCTGCCGG+CGG 0.547760 1_2:-66677766 Msa0086090:CDS
TTTCTCATGATGCTCATGGA+AGG 0.551185 1_2:+66676624 None:intergenic
ACCACTGGTGGCGGCTACGG+CGG 0.552249 1_2:-66678108 Msa0086090:CDS
ACGGGTGGCGGATATGGTGG+TGG 0.554084 1_2:-66678006 Msa0086090:CDS
TGTAACCACCACCAGATGGC+TGG 0.555821 1_2:+66678244 None:intergenic
AGCATGATGATGATGATAGT+AGG 0.556478 1_2:-66678362 Msa0086090:CDS
ACTAAAACAACCACTGGAGG+CGG 0.561518 1_2:-66677919 Msa0086090:CDS
ACCACTGGAGGCGGCTACGG+TGG 0.561554 1_2:-66677910 Msa0086090:CDS
CATGCTTCTTGTGATGGAAG+AGG 0.565809 1_2:+66678379 None:intergenic
ACAACCACTGGCGGCTACGG+TGG 0.567166 1_2:-66677961 Msa0086090:CDS
TCTGACACTAAAACAACCAC+TGG 0.570147 1_2:-66677925 Msa0086090:CDS
ACCACTGGTGGTGGCTACGG+TGG 0.575768 1_2:-66678060 Msa0086090:CDS
ACCACCGTAGCCGCCTCCAG+TGG 0.576587 1_2:+66677909 None:intergenic
AAGACCCAGAGAACGCTCAC+AGG 0.577440 1_2:-66676702 Msa0086090:CDS
TCTGACACTAAAACAACCAC+TGG 0.581882 1_2:-66677973 Msa0086090:CDS
TCTGACACCAAAACAACCAC+GGG 0.584515 1_2:-66678024 Msa0086090:CDS
ACATCTATATGACACCAAGC+TGG 0.586244 1_2:+66676376 None:intergenic
CAAGATGCTCATCTTTGCTG+TGG 0.586800 1_2:+66677794 None:intergenic
TCTGACACCAAAACCACCAC+CGG 0.597416 1_2:-66677874 Msa0086090:CDS
ACCACCATATCCGCCACCCG+TGG 0.603586 1_2:+66678008 None:intergenic
CAGCTGCAGTGGGATCTGGT+GGG 0.605425 1_2:-66676651 Msa0086090:CDS
TCTTGTGATGGAAGAGGCCA+CGG 0.606734 1_2:+66678385 None:intergenic
GACACTAAAACAACCACTGG+CGG 0.607430 1_2:-66677970 Msa0086090:CDS
ATCGTCACCATAACCACCAC+CGG 0.607906 1_2:+66677855 None:intergenic
TATGGTGCCAAAACAACCAC+TGG 0.612429 1_2:-66678123 Msa0086090:CDS
TCTAATAATGAAACATCTGG+TGG 0.616695 1_2:-66678147 Msa0086090:CDS
CTCTGACACCAAAACAACCA+CGG 0.619600 1_2:-66678025 Msa0086090:CDS
TTATTGTAACCACCACCAGA+TGG 0.622037 1_2:+66678240 None:intergenic
ACCACCACCGTAGCCGCCAG+TGG 0.623805 1_2:+66677957 None:intergenic
ACGGTTCTCTTCATCAGACA+TGG 0.625188 1_2:+66678410 None:intergenic
GACACTAAAACAACCACTGG+AGG 0.626777 1_2:-66677922 Msa0086090:CDS
ACCGCCGTAGCCGCCACCAG+TGG 0.626903 1_2:+66678107 None:intergenic
GATGACCAGCCATCTGGTGG+TGG 0.627887 1_2:-66678249 Msa0086090:CDS
GACACCAAAACAACCACGGG+TGG 0.630084 1_2:-66678021 Msa0086090:CDS
GACACCAAAACCACCACCGG+TGG 0.634543 1_2:-66677871 Msa0086090:CDS
GATGAAGAGAACCGTAGCCG+TGG 0.635065 1_2:-66678402 Msa0086090:CDS
GAGGAAGAAGAGGAAGCTCA+GGG 0.640582 1_2:-66676589 Msa0086090:CDS
AATTACCAAAGCAAAACCGC+CGG 0.640922 1_2:+66677750 None:intergenic
ACCACCGTAGCCACCACCAG+TGG 0.645976 1_2:+66678059 None:intergenic
TCTGACACCAAAACCACTGG+TGG 0.658393 1_2:-66678072 Msa0086090:CDS
GGTGCCAAAACAACCACTGG+TGG 0.667985 1_2:-66678120 Msa0086090:CDS
GTCACCATAACCACCACCGG+TGG 0.707664 1_2:+66677858 None:intergenic
AATGATGACCAGCCATCTGG+TGG 0.714048 1_2:-66678252 Msa0086090:CDS
TATGGTAATGACAATTCTGG+TGG 0.722206 1_2:-66678210 Msa0086090:CDS
AGACGTTGATTATAAGAACG+AGG 0.726638 1_2:-66677824 Msa0086090:CDS
AGGCCTATAGACACTGACAG+TGG 0.729201 1_2:-66678342 Msa0086090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATTATTCAAATGTTT+TGG + chr1_2:66677083-66677102 None:intergenic 10.0%
!!! TACATTTCAATTTTTTATTT+TGG + chr1_2:66677741-66677760 None:intergenic 10.0%
!!! TATTAATTATTCAAATGTTT+TGG + chr1_2:66677083-66677102 None:intergenic 10.0%
!!! TACATTTCAATTTTTTATTT+TGG + chr1_2:66677741-66677760 None:intergenic 10.0%
!! GAAACAAATAACAAAAATAT+GGG + chr1_2:66676978-66676997 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG + chr1_2:66676979-66676998 None:intergenic 15.0%
!!! CTTATAATTAATTATGCTTT+TGG - chr1_2:66678195-66678214 Msa0086090:CDS 15.0%
!! GAAACAAATAACAAAAATAT+GGG + chr1_2:66676978-66676997 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG + chr1_2:66676979-66676998 None:intergenic 15.0%
!!! CTTATAATTAATTATGCTTT+TGG - chr1_2:66678195-66678214 Msa0086090:CDS 15.0%
!!! AATCAATAAATTTTCTCTGA+TGG - chr1_2:66677029-66677048 Msa0086090:intron 20.0%
!!! AATTATTCAAATGTTTTGGA+AGG + chr1_2:66677079-66677098 None:intergenic 20.0%
!! GACTAATATTCATTAATAAG+TGG - chr1_2:66677409-66677428 Msa0086090:intron 20.0%
!! TGTAAAAATTCTATCTTGAT+TGG - chr1_2:66677757-66677776 Msa0086090:CDS 20.0%
!! TTTGTCTCAATAAAATTCTT+TGG - chr1_2:66678406-66678425 Msa0086090:CDS 20.0%
!!! AATCAATAAATTTTCTCTGA+TGG - chr1_2:66677029-66677048 Msa0086090:intron 20.0%
!!! AATTATTCAAATGTTTTGGA+AGG + chr1_2:66677079-66677098 None:intergenic 20.0%
!! GACTAATATTCATTAATAAG+TGG - chr1_2:66677409-66677428 Msa0086090:intron 20.0%
!! TGTAAAAATTCTATCTTGAT+TGG - chr1_2:66677757-66677776 Msa0086090:CDS 20.0%
!! TTTGTCTCAATAAAATTCTT+TGG - chr1_2:66678406-66678425 Msa0086090:CDS 20.0%
! GGTTACAATAAAACATCATA+TGG - chr1_2:66676431-66676450 Msa0086090:three_prime_UTR 25.0%
! TACTCTAATAATGAAACATC+TGG - chr1_2:66676509-66676528 Msa0086090:three_prime_UTR 25.0%
! TAAATAGCAATTAGGAGTAA+TGG + chr1_2:66676949-66676968 None:intergenic 25.0%
! TTCCTATTATGGAAATCTTA+GGG + chr1_2:66677528-66677547 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG + chr1_2:66677529-66677548 None:intergenic 25.0%
!! TTGATGCAATTTTCCTATTA+TGG + chr1_2:66677539-66677558 None:intergenic 25.0%
! TTACGCTATAAATAGACATA+GGG - chr1_2:66677827-66677846 Msa0086090:CDS 25.0%
! ACTGATAAGTACACAATATA+CGG - chr1_2:66678329-66678348 Msa0086090:CDS 25.0%
! GGTTACAATAAAACATCATA+TGG - chr1_2:66676431-66676450 Msa0086090:three_prime_UTR 25.0%
! TACTCTAATAATGAAACATC+TGG - chr1_2:66676509-66676528 Msa0086090:three_prime_UTR 25.0%
! TAAATAGCAATTAGGAGTAA+TGG + chr1_2:66676949-66676968 None:intergenic 25.0%
! TTCCTATTATGGAAATCTTA+GGG + chr1_2:66677528-66677547 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG + chr1_2:66677529-66677548 None:intergenic 25.0%
!! TTGATGCAATTTTCCTATTA+TGG + chr1_2:66677539-66677558 None:intergenic 25.0%
! TTACGCTATAAATAGACATA+GGG - chr1_2:66677827-66677846 Msa0086090:CDS 25.0%
! ACTGATAAGTACACAATATA+CGG - chr1_2:66678329-66678348 Msa0086090:CDS 25.0%
AACAAAACATCATACTCTAC+AGG - chr1_2:66676344-66676363 Msa0086090:three_prime_UTR 30.0%
! TCATATGGTAATGACAATTC+TGG - chr1_2:66676446-66676465 Msa0086090:three_prime_UTR 30.0%
TCTAATAATGAAACATCTGG+TGG - chr1_2:66676512-66676531 Msa0086090:three_prime_UTR 30.0%
GGAGAGATTAAATAGCAATT+AGG + chr1_2:66676957-66676976 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG + chr1_2:66677204-66677223 None:intergenic 30.0%
AATGATTATCTCAAACATCG+TGG + chr1_2:66677453-66677472 None:intergenic 30.0%
!!! ACATGTTTTTTTGTAGAGTC+AGG - chr1_2:66677635-66677654 Msa0086090:intron 30.0%
AAGCCTATAACAAATACGAA+CGG - chr1_2:66677669-66677688 Msa0086090:intron 30.0%
GTTACGCTATAAATAGACAT+AGG - chr1_2:66677826-66677845 Msa0086090:CDS 30.0%
TCATGAGAAAAAGGAAACAA+AGG - chr1_2:66678048-66678067 Msa0086090:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG - chr1_2:66678094-66678113 Msa0086090:CDS 30.0%
CATATGTTCATCCAAAGAAA+TGG + chr1_2:66678108-66678127 None:intergenic 30.0%
ATAAGCACACAAGCATATTA+TGG - chr1_2:66678147-66678166 Msa0086090:CDS 30.0%
GTGTCATATAGATGTATGTA+TGG - chr1_2:66678291-66678310 Msa0086090:CDS 30.0%
AACAAAACATCATACTCTAC+AGG - chr1_2:66676344-66676363 Msa0086090:three_prime_UTR 30.0%
! TCATATGGTAATGACAATTC+TGG - chr1_2:66676446-66676465 Msa0086090:three_prime_UTR 30.0%
TCTAATAATGAAACATCTGG+TGG - chr1_2:66676512-66676531 Msa0086090:three_prime_UTR 30.0%
GGAGAGATTAAATAGCAATT+AGG + chr1_2:66676957-66676976 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG + chr1_2:66677204-66677223 None:intergenic 30.0%
AATGATTATCTCAAACATCG+TGG + chr1_2:66677453-66677472 None:intergenic 30.0%
!!! ACATGTTTTTTTGTAGAGTC+AGG - chr1_2:66677635-66677654 Msa0086090:intron 30.0%
AAGCCTATAACAAATACGAA+CGG - chr1_2:66677669-66677688 Msa0086090:intron 30.0%
GTTACGCTATAAATAGACAT+AGG - chr1_2:66677826-66677845 Msa0086090:CDS 30.0%
TCATGAGAAAAAGGAAACAA+AGG - chr1_2:66678048-66678067 Msa0086090:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG - chr1_2:66678094-66678113 Msa0086090:CDS 30.0%
CATATGTTCATCCAAAGAAA+TGG + chr1_2:66678108-66678127 None:intergenic 30.0%
ATAAGCACACAAGCATATTA+TGG - chr1_2:66678147-66678166 Msa0086090:CDS 30.0%
GTGTCATATAGATGTATGTA+TGG - chr1_2:66678291-66678310 Msa0086090:CDS 30.0%
! AGCATGATGATGATGATAGT+AGG - chr1_2:66676297-66676316 Msa0086090:three_prime_UTR 35.0%
! TATGGTAATGACAATTCTGG+TGG - chr1_2:66676449-66676468 Msa0086090:three_prime_UTR 35.0%
! AGACGTTGATTATAAGAACG+AGG - chr1_2:66676835-66676854 Msa0086090:intron 35.0%
! AGATGTTAGTTTAGTGGTAC+TGG + chr1_2:66677198-66677217 None:intergenic 35.0%
TAGTCATGCTCAACAAGATT+AGG + chr1_2:66677394-66677413 None:intergenic 35.0%
TGTAATCTCCAACAACAAAG+TGG + chr1_2:66677562-66677581 None:intergenic 35.0%
!! TCACCGTTCGTATTTGTTAT+AGG + chr1_2:66677675-66677694 None:intergenic 35.0%
AACATCCAAGCAAATCTGAA+CGG + chr1_2:66677784-66677803 None:intergenic 35.0%
TGAGAAAAAGGAAACAAAGG+AGG - chr1_2:66678051-66678070 Msa0086090:CDS 35.0%
! AGCATGATGATGATGATAGT+AGG - chr1_2:66676297-66676316 Msa0086090:three_prime_UTR 35.0%
! TATGGTAATGACAATTCTGG+TGG - chr1_2:66676449-66676468 Msa0086090:three_prime_UTR 35.0%
! AGACGTTGATTATAAGAACG+AGG - chr1_2:66676835-66676854 Msa0086090:intron 35.0%
! AGATGTTAGTTTAGTGGTAC+TGG + chr1_2:66677198-66677217 None:intergenic 35.0%
TAGTCATGCTCAACAAGATT+AGG + chr1_2:66677394-66677413 None:intergenic 35.0%
TGTAATCTCCAACAACAAAG+TGG + chr1_2:66677562-66677581 None:intergenic 35.0%
!! TCACCGTTCGTATTTGTTAT+AGG + chr1_2:66677675-66677694 None:intergenic 35.0%
AACATCCAAGCAAATCTGAA+CGG + chr1_2:66677784-66677803 None:intergenic 35.0%
TGAGAAAAAGGAAACAAAGG+AGG - chr1_2:66678051-66678070 Msa0086090:CDS 35.0%
CATCATCATGCTTCTTGTGA+TGG + chr1_2:66676289-66676308 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG + chr1_2:66676323-66676342 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG - chr1_2:66676362-66676381 Msa0086090:three_prime_UTR 40.0%
TTATTGTAACCACCACCAGA+TGG + chr1_2:66676422-66676441 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG - chr1_2:66676518-66676537 Msa0086090:three_prime_UTR 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_2:66676686-66676705 Msa0086090:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_2:66676686-66676705 Msa0086090:CDS 40.0%
AATTACCAAAGCAAAACCGC+CGG + chr1_2:66676912-66676931 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG - chr1_2:66677523-66677542 Msa0086090:intron 40.0%
! TGCATCAACCACTTTGTTGT+TGG - chr1_2:66677551-66677570 Msa0086090:intron 40.0%
! GTTCAGATTTGCTTGGATGT+TGG - chr1_2:66677783-66677802 Msa0086090:CDS 40.0%
! AGATTTGCTTGGATGTTGGT+AGG - chr1_2:66677787-66677806 Msa0086090:CDS 40.0%
TTTCTCATGATGCTCATGGA+AGG + chr1_2:66678038-66678057 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG + chr1_2:66678042-66678061 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG - chr1_2:66678039-66678058 Msa0086090:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG - chr1_2:66678246-66678265 Msa0086090:CDS 40.0%
TTTGGAGAATGTTTCCAGCT+TGG - chr1_2:66678269-66678288 Msa0086090:CDS 40.0%
ACATCTATATGACACCAAGC+TGG + chr1_2:66678286-66678305 None:intergenic 40.0%
CATCATCATGCTTCTTGTGA+TGG + chr1_2:66676289-66676308 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG + chr1_2:66676323-66676342 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG - chr1_2:66676362-66676381 Msa0086090:three_prime_UTR 40.0%
TTATTGTAACCACCACCAGA+TGG + chr1_2:66676422-66676441 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG - chr1_2:66676518-66676537 Msa0086090:three_prime_UTR 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_2:66676686-66676705 Msa0086090:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_2:66676686-66676705 Msa0086090:CDS 40.0%
AATTACCAAAGCAAAACCGC+CGG + chr1_2:66676912-66676931 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG - chr1_2:66677523-66677542 Msa0086090:intron 40.0%
! TGCATCAACCACTTTGTTGT+TGG - chr1_2:66677551-66677570 Msa0086090:intron 40.0%
! GTTCAGATTTGCTTGGATGT+TGG - chr1_2:66677783-66677802 Msa0086090:CDS 40.0%
! AGATTTGCTTGGATGTTGGT+AGG - chr1_2:66677787-66677806 Msa0086090:CDS 40.0%
TTTCTCATGATGCTCATGGA+AGG + chr1_2:66678038-66678057 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG + chr1_2:66678042-66678061 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG - chr1_2:66678039-66678058 Msa0086090:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG - chr1_2:66678246-66678265 Msa0086090:CDS 40.0%
TTTGGAGAATGTTTCCAGCT+TGG - chr1_2:66678269-66678288 Msa0086090:CDS 40.0%
ACATCTATATGACACCAAGC+TGG + chr1_2:66678286-66678305 None:intergenic 40.0%
! CATGCTTCTTGTGATGGAAG+AGG + chr1_2:66676283-66676302 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG - chr1_2:66676404-66676423 Msa0086090:three_prime_UTR 45.0%
! TCTGGTGGTGACTATGAAAC+TGG - chr1_2:66676464-66676483 Msa0086090:three_prime_UTR 45.0%
! TATGGTGCCAAAACAACCAC+TGG - chr1_2:66676536-66676555 Msa0086090:three_prime_UTR 45.0%
CTCTGACACCAAAACAACCA+CGG - chr1_2:66676634-66676653 Msa0086090:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG - chr1_2:66676635-66676654 Msa0086090:CDS 45.0%
GACACTAAAACAACCACTGG+CGG - chr1_2:66676689-66676708 Msa0086090:CDS 45.0%
GACACTAAAACAACCACTGG+AGG - chr1_2:66676689-66676708 Msa0086090:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG - chr1_2:66676740-66676759 Msa0086090:intron 45.0%
CAAGATGCTCATCTTTGCTG+TGG + chr1_2:66676868-66676887 None:intergenic 45.0%
CACAGCAAAGATGAGCATCT+TGG - chr1_2:66676866-66676885 Msa0086090:intron 45.0%
GATGAGCATCTTGGTGAGTT+AGG - chr1_2:66676875-66676894 Msa0086090:intron 45.0%
ACGAACGGTGAGATCAAGAT+CGG - chr1_2:66677684-66677703 Msa0086090:intron 45.0%
! TTGGACCGTTCAGATTTGCT+TGG - chr1_2:66677776-66677795 Msa0086090:CDS 45.0%
GGAAACAAAGGAGGAAGAAG+AGG - chr1_2:66678060-66678079 Msa0086090:CDS 45.0%
CCAAACCACTCAAAGCAAAC+TGG + chr1_2:66678254-66678273 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG - chr1_2:66678251-66678270 Msa0086090:CDS 45.0%
! CATGCTTCTTGTGATGGAAG+AGG + chr1_2:66676283-66676302 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG - chr1_2:66676404-66676423 Msa0086090:three_prime_UTR 45.0%
! TCTGGTGGTGACTATGAAAC+TGG - chr1_2:66676464-66676483 Msa0086090:three_prime_UTR 45.0%
! TATGGTGCCAAAACAACCAC+TGG - chr1_2:66676536-66676555 Msa0086090:three_prime_UTR 45.0%
CTCTGACACCAAAACAACCA+CGG - chr1_2:66676634-66676653 Msa0086090:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG - chr1_2:66676635-66676654 Msa0086090:CDS 45.0%
GACACTAAAACAACCACTGG+CGG - chr1_2:66676689-66676708 Msa0086090:CDS 45.0%
GACACTAAAACAACCACTGG+AGG - chr1_2:66676689-66676708 Msa0086090:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG - chr1_2:66676740-66676759 Msa0086090:intron 45.0%
CAAGATGCTCATCTTTGCTG+TGG + chr1_2:66676868-66676887 None:intergenic 45.0%
CACAGCAAAGATGAGCATCT+TGG - chr1_2:66676866-66676885 Msa0086090:intron 45.0%
GATGAGCATCTTGGTGAGTT+AGG - chr1_2:66676875-66676894 Msa0086090:intron 45.0%
ACGAACGGTGAGATCAAGAT+CGG - chr1_2:66677684-66677703 Msa0086090:intron 45.0%
! TTGGACCGTTCAGATTTGCT+TGG - chr1_2:66677776-66677795 Msa0086090:CDS 45.0%
GGAAACAAAGGAGGAAGAAG+AGG - chr1_2:66678060-66678079 Msa0086090:CDS 45.0%
CCAAACCACTCAAAGCAAAC+TGG + chr1_2:66678254-66678273 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG - chr1_2:66678251-66678270 Msa0086090:CDS 45.0%
!! GAAAAATATATAAAAAATTA+AGG + chr1_2:66677297-66677316 None:intergenic 5.0%
!! AAAAAATTAATTACAAAATT+TGG + chr1_2:66677594-66677613 None:intergenic 5.0%
!!! TATTTTTAAATTTTCAATTT+TGG + chr1_2:66677876-66677895 None:intergenic 5.0%
!! GAAAAATATATAAAAAATTA+AGG + chr1_2:66677297-66677316 None:intergenic 5.0%
!! AAAAAATTAATTACAAAATT+TGG + chr1_2:66677594-66677613 None:intergenic 5.0%
!!! TATTTTTAAATTTTCAATTT+TGG + chr1_2:66677876-66677895 None:intergenic 5.0%
! TCTTGTGATGGAAGAGGCCA+CGG + chr1_2:66676277-66676296 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG - chr1_2:66676317-66676336 Msa0086090:three_prime_UTR 50.0%
AATGATGACCAGCCATCTGG+TGG - chr1_2:66676407-66676426 Msa0086090:three_prime_UTR 50.0%
GACTCTGACACCAAAACCAC+TGG - chr1_2:66676584-66676603 Msa0086090:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG - chr1_2:66676587-66676606 Msa0086090:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG - chr1_2:66676596-66676615 Msa0086090:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG - chr1_2:66676695-66676714 Msa0086090:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG - chr1_2:66676785-66676804 Msa0086090:intron 50.0%
ATCGTCACCATAACCACCAC+CGG + chr1_2:66676807-66676826 None:intergenic 50.0%
GAGGAAGAAGAGGAAGCTCA+GGG - chr1_2:66678070-66678089 Msa0086090:CDS 50.0%
! TCTTGTGATGGAAGAGGCCA+CGG + chr1_2:66676277-66676296 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG - chr1_2:66676317-66676336 Msa0086090:three_prime_UTR 50.0%
AATGATGACCAGCCATCTGG+TGG - chr1_2:66676407-66676426 Msa0086090:three_prime_UTR 50.0%
GACTCTGACACCAAAACCAC+TGG - chr1_2:66676584-66676603 Msa0086090:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG - chr1_2:66676587-66676606 Msa0086090:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG - chr1_2:66676596-66676615 Msa0086090:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG - chr1_2:66676695-66676714 Msa0086090:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG - chr1_2:66676785-66676804 Msa0086090:intron 50.0%
ATCGTCACCATAACCACCAC+CGG + chr1_2:66676807-66676826 None:intergenic 50.0%
GAGGAAGAAGAGGAAGCTCA+GGG - chr1_2:66678070-66678089 Msa0086090:CDS 50.0%
GATGAAGAGAACCGTAGCCG+TGG - chr1_2:66676257-66676276 Msa0086090:three_prime_UTR 55.0%
TGTAACCACCACCAGATGGC+TGG + chr1_2:66676418-66676437 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG - chr1_2:66676539-66676558 Msa0086090:three_prime_UTR 55.0%
GCCAAAACAACCACTGGTGG+CGG - chr1_2:66676542-66676561 Msa0086090:exon 55.0%
GACACCAAAACCACTGGTGG+TGG - chr1_2:66676590-66676609 Msa0086090:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG + chr1_2:66676597-66676616 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG - chr1_2:66676638-66676657 Msa0086090:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG - chr1_2:66676641-66676660 Msa0086090:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG - chr1_2:66676659-66676678 Msa0086090:CDS 55.0%
AAGACCCAGAGAACGCTCAC+AGG - chr1_2:66677957-66677976 Msa0086090:CDS 55.0%
TGTGCCTGTGAGCGTTCTCT+GGG + chr1_2:66677964-66677983 None:intergenic 55.0%
TTGTGCCTGTGAGCGTTCTC+TGG + chr1_2:66677965-66677984 None:intergenic 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG - chr1_2:66677997-66678016 Msa0086090:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG - chr1_2:66677998-66678017 Msa0086090:CDS 55.0%
GGAGGAAGAAGAGGAAGCTC+AGG - chr1_2:66678069-66678088 Msa0086090:CDS 55.0%
GATGAAGAGAACCGTAGCCG+TGG - chr1_2:66676257-66676276 Msa0086090:three_prime_UTR 55.0%
TGTAACCACCACCAGATGGC+TGG + chr1_2:66676418-66676437 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG - chr1_2:66676539-66676558 Msa0086090:three_prime_UTR 55.0%
GCCAAAACAACCACTGGTGG+CGG - chr1_2:66676542-66676561 Msa0086090:exon 55.0%
GACACCAAAACCACTGGTGG+TGG - chr1_2:66676590-66676609 Msa0086090:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG + chr1_2:66676597-66676616 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG - chr1_2:66676638-66676657 Msa0086090:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG - chr1_2:66676641-66676660 Msa0086090:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG - chr1_2:66676659-66676678 Msa0086090:CDS 55.0%
AAGACCCAGAGAACGCTCAC+AGG - chr1_2:66677957-66677976 Msa0086090:CDS 55.0%
TGTGCCTGTGAGCGTTCTCT+GGG + chr1_2:66677964-66677983 None:intergenic 55.0%
TTGTGCCTGTGAGCGTTCTC+TGG + chr1_2:66677965-66677984 None:intergenic 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG - chr1_2:66677997-66678016 Msa0086090:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG - chr1_2:66677998-66678017 Msa0086090:CDS 55.0%
GGAGGAAGAAGAGGAAGCTC+AGG - chr1_2:66678069-66678088 Msa0086090:CDS 55.0%
GATGGAAGAGGCCACGGCTA+CGG + chr1_2:66676271-66676290 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG - chr1_2:66676410-66676429 Msa0086090:three_prime_UTR 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG + chr1_2:66676546-66676565 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_2:66676548-66676567 Msa0086090:exon 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG - chr1_2:66676608-66676627 Msa0086090:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG + chr1_2:66676645-66676664 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG - chr1_2:66676647-66676666 Msa0086090:CDS 60.0%
ACAACCACTGGAGGCGGCTA+CGG - chr1_2:66676746-66676765 Msa0086090:intron 60.0%
GACACCAAAACCACCACCGG+TGG - chr1_2:66676788-66676807 Msa0086090:intron 60.0%
ACCAAAACCACCACCGGTGG+TGG - chr1_2:66676791-66676810 Msa0086090:intron 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG + chr1_2:66676795-66676814 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG - chr1_2:66676797-66676816 Msa0086090:intron 60.0%
ACCATAACCACCACCGGTGG+TGG + chr1_2:66676801-66676820 None:intergenic 60.0%
GTCACCATAACCACCACCGG+TGG + chr1_2:66676804-66676823 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+CGG - chr1_2:66676890-66676909 Msa0086090:intron 60.0%
! AGCTGCCGGCGGTTTTGCTT+TGG - chr1_2:66676904-66676923 Msa0086090:intron 60.0%
GAAGCAGCTGCAGTGGGATC+TGG - chr1_2:66678004-66678023 Msa0086090:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG - chr1_2:66678008-66678027 Msa0086090:CDS 60.0%
GATGGAAGAGGCCACGGCTA+CGG + chr1_2:66676271-66676290 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG - chr1_2:66676410-66676429 Msa0086090:three_prime_UTR 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG + chr1_2:66676546-66676565 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_2:66676548-66676567 Msa0086090:exon 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG - chr1_2:66676608-66676627 Msa0086090:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG + chr1_2:66676645-66676664 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG - chr1_2:66676647-66676666 Msa0086090:CDS 60.0%
ACAACCACTGGAGGCGGCTA+CGG - chr1_2:66676746-66676765 Msa0086090:intron 60.0%
GACACCAAAACCACCACCGG+TGG - chr1_2:66676788-66676807 Msa0086090:intron 60.0%
ACCAAAACCACCACCGGTGG+TGG - chr1_2:66676791-66676810 Msa0086090:intron 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG + chr1_2:66676795-66676814 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG - chr1_2:66676797-66676816 Msa0086090:intron 60.0%
ACCATAACCACCACCGGTGG+TGG + chr1_2:66676801-66676820 None:intergenic 60.0%
GTCACCATAACCACCACCGG+TGG + chr1_2:66676804-66676823 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+CGG - chr1_2:66676890-66676909 Msa0086090:intron 60.0%
! AGCTGCCGGCGGTTTTGCTT+TGG - chr1_2:66676904-66676923 Msa0086090:intron 60.0%
GAAGCAGCTGCAGTGGGATC+TGG - chr1_2:66678004-66678023 Msa0086090:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG - chr1_2:66678008-66678027 Msa0086090:CDS 60.0%
!! ACCACTGGTGGTGGCTACGG+TGG - chr1_2:66676599-66676618 Msa0086090:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG + chr1_2:66676603-66676622 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG - chr1_2:66676602-66676621 Msa0086090:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG - chr1_2:66676650-66676669 Msa0086090:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG + chr1_2:66676654-66676673 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG - chr1_2:66676653-66676672 Msa0086090:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG - chr1_2:66676698-66676717 Msa0086090:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_2:66676707-66676726 Msa0086090:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG - chr1_2:66676758-66676777 Msa0086090:intron 65.0%
! TTAGGTGCTGCAGCTGCCGG+CGG - chr1_2:66676893-66676912 Msa0086090:intron 65.0%
GCAGCTGCAGTGGGATCTGG+TGG - chr1_2:66678007-66678026 Msa0086090:CDS 65.0%
!! ACCACTGGTGGTGGCTACGG+TGG - chr1_2:66676599-66676618 Msa0086090:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG + chr1_2:66676603-66676622 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG - chr1_2:66676602-66676621 Msa0086090:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG - chr1_2:66676650-66676669 Msa0086090:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG + chr1_2:66676654-66676673 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG - chr1_2:66676653-66676672 Msa0086090:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG - chr1_2:66676698-66676717 Msa0086090:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_2:66676707-66676726 Msa0086090:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG - chr1_2:66676758-66676777 Msa0086090:intron 65.0%
! TTAGGTGCTGCAGCTGCCGG+CGG - chr1_2:66676893-66676912 Msa0086090:intron 65.0%
GCAGCTGCAGTGGGATCTGG+TGG - chr1_2:66678007-66678026 Msa0086090:CDS 65.0%
!! ACCACTGGTGGCGGCTACGG+CGG - chr1_2:66676551-66676570 Msa0086090:exon 70.0%
GGCGGCTACGGCGGTGGTTA+TGG - chr1_2:66676560-66676579 Msa0086090:exon 70.0%
ACCACTGGCGGCTACGGTGG+TGG - chr1_2:66676701-66676720 Msa0086090:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG + chr1_2:66676705-66676724 None:intergenic 70.0%
ACCACTGGAGGCGGCTACGG+TGG - chr1_2:66676749-66676768 Msa0086090:intron 70.0%
ACCACCGTAGCCGCCTCCAG+TGG + chr1_2:66676753-66676772 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG - chr1_2:66676752-66676771 Msa0086090:intron 70.0%
!! ACCACTGGTGGCGGCTACGG+CGG - chr1_2:66676551-66676570 Msa0086090:exon 70.0%
GGCGGCTACGGCGGTGGTTA+TGG - chr1_2:66676560-66676579 Msa0086090:exon 70.0%
ACCACTGGCGGCTACGGTGG+TGG - chr1_2:66676701-66676720 Msa0086090:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG + chr1_2:66676705-66676724 None:intergenic 70.0%
ACCACTGGAGGCGGCTACGG+TGG - chr1_2:66676749-66676768 Msa0086090:intron 70.0%
ACCACCGTAGCCGCCTCCAG+TGG + chr1_2:66676753-66676772 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG - chr1_2:66676752-66676771 Msa0086090:intron 70.0%
ACCGCCGTAGCCGCCACCAG+TGG + chr1_2:66676555-66676574 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG - chr1_2:66676554-66676573 Msa0086090:exon 75.0%
ACCGCCGTAGCCGCCACCAG+TGG + chr1_2:66676555-66676574 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG - chr1_2:66676554-66676573 Msa0086090:exon 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 66676251 66678430 66676251 ID=Msa0086090;Name=Msa0086090
chr1_2 mRNA 66676251 66678430 66676251 ID=Msa0086090-mRNA-1;Parent=Msa0086090;Name=Msa0086090-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|310|286
chr1_2 exon 66676251 66676746 66676251 ID=Msa0086090-mRNA-1:exon:22496;Parent=Msa0086090-mRNA-1
chr1_2 exon 66677756 66678430 66677756 ID=Msa0086090-mRNA-1:exon:22495;Parent=Msa0086090-mRNA-1
chr1_2 CDS 66677756 66678430 66677756 ID=Msa0086090-mRNA-1:cds;Parent=Msa0086090-mRNA-1
chr1_2 CDS 66676561 66676746 66676561 ID=Msa0086090-mRNA-1:cds;Parent=Msa0086090-mRNA-1
chr1_2 three_prime_UTR 66676251 66676560 66676251 ID=Msa0086090-mRNA-1:three_prime_utr;Parent=Msa0086090-mRNA-1
Gene Sequence

>Msa0086090

ATGTCTGATGAAGAGAACCGTAGCCGTGGCCTCTTCCATCACAAGAAGCATGATGATGATGATAGTAGGCCTATAGACACTGACAGTGGTTACAACAAAACATCATACTCTACAGGTGATGACTATGATTCTGGTTATAACAAAAAAACATCGTACAATGATGACCAGCCATCTGGTGGTGGTTACAATAAAACATCATATGGTAATGACAATTCTGGTGGTGACTATGAAACTGGTTACAATAAGAACACTGATAATTACTCTAATAATGAAACATCTGGTGGCTATGGTGCCAAAACAACCACTGGTGGCGGCTACGGCGGTGGTTATGGTGACTCTGACACCAAAACCACTGGTGGTGGCTACGGTGGTGGTTATGGTGACTCTGACACCAAAACAACCACGGGTGGCGGATATGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGCGGCTACGGTGGTGGTTATGGTGATTCTGACACTAAAACAACCACTGGAGGCGGCTACGGTGGTGGATATGGTGACTCTGACACCAAAACCACCACCGGTGGTGGTTATGGTGACGATCGTCGTGAAGACGTTGATTATAAGAACGAGGAGAAACGCCACAGCAAAGATGAGCATCTTGGTGAGTTAGGTGCTGCAGCTGCCGGCGGTTTTGCTTTGTATGAGAAGCAAAAGTCAGAGAAAGACCCAGAGAACGCTCACAGGCACAAGATAGAAGAAGAAGTTGCAGAAGCAGCTGCAGTGGGATCTGGTGGGTTCGCCTTCCATGAGCATCATGAGAAAAAGGAAACAAAGGAGGAAGAAGAGGAAGCTCAGGGAAAGAAGAAACACCATTTCTTTGGATGA

Protein sequence

>Msa0086090

MSDEENRSRGLFHHKKHDDDDSRPIDTDSGYNKTSYSTGDDYDSGYNKKTSYNDDQPSGGGYNKTSYGNDNSGGDYETGYNKNTDNYSNNETSGGYGAKTTTGGGYGGGYGDSDTKTTGGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGGYGDDRREDVDYKNEEKRHSKDEHLGELGAAAAGGFALYEKQKSEKDPENAHRHKIEEEVAEAAAVGSGGFAFHEHHEKKETKEEEEEAQGKKKHHFFG*