AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0365150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365150 MtrunA17_Chr3g0129301 95.442 724 9 1 1 724 1 700 0.0 1409
Msa0365150 MtrunA17_Chr2g0327291 29.590 561 349 8 99 656 57 574 6.90e-73 248
Msa0365150 MtrunA17_Chr2g0327291 26.016 246 151 3 457 674 64 306 2.65e-19 92.4
Msa0365150 MtrunA17_Chr4g0028471 29.412 561 350 8 99 656 57 574 7.80e-72 244
Msa0365150 MtrunA17_Chr4g0028471 26.316 247 149 4 457 674 64 306 2.51e-19 92.4
Msa0365150 MtrunA17_Chr8g0371361 27.830 636 368 15 83 680 131 713 2.69e-63 224
Msa0365150 MtrunA17_Chr8g0371361 26.736 288 169 7 457 705 154 438 3.95e-22 101
Msa0365150 MtrunA17_Chr7g0220881 27.373 632 366 15 89 680 137 715 1.83e-62 222
Msa0365150 MtrunA17_Chr7g0220881 26.389 288 170 6 457 705 154 438 2.41e-22 102
Msa0365150 MtrunA17_Chr3g0119921 27.979 579 364 11 97 660 166 706 2.12e-62 221
Msa0365150 MtrunA17_Chr1g0181461 28.499 593 355 13 116 680 10 561 8.54e-61 214
Msa0365150 MtrunA17_Chr1g0181461 29.310 290 161 9 469 716 12 299 4.38e-22 100
Msa0365150 MtrunA17_Chr3g0130211 31.383 188 87 6 446 607 21 192 5.41e-16 79.0
Msa0365150 MtrunA17_Chr1g0180601 27.236 246 152 8 454 674 1052 1295 1.18e-14 78.2
Msa0365150 MtrunA17_Chr8g0344651 26.383 235 149 7 451 663 592 824 2.33e-14 77.4
Msa0365150 MtrunA17_Chr7g0264631 26.016 246 155 8 454 674 1078 1321 3.83e-14 76.6
Msa0365150 MtrunA17_Chr4g0041871 27.632 228 139 7 454 658 1003 1227 4.09e-14 76.6
Msa0365150 MtrunA17_Chr1g0178481 29.231 195 111 7 461 630 384 576 2.05e-12 70.5
Msa0365150 MtrunA17_Chr5g0410921 30.811 185 103 7 468 630 370 551 8.13e-12 68.9
Msa0365150 MtrunA17_Chr5g0410921 25.000 244 142 8 429 650 979 1203 5.23e-11 66.6
Msa0365150 MtrunA17_Chr1g0156821 29.592 196 116 6 457 630 994 1189 9.50e-12 68.9
Msa0365150 MtrunA17_Chr7g0249091 27.826 230 128 6 456 648 85 313 2.45e-11 65.9
Msa0365150 MtrunA17_Chr3g0093091 24.436 266 172 6 476 712 642 907 2.69e-11 67.4
Msa0365150 MtrunA17_Chr3g0123411 28.079 203 124 6 468 650 919 1119 4.66e-11 66.6
Msa0365150 MtrunA17_Chr1g0211721 30.178 169 103 5 485 643 377 540 5.25e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365150 AT5G64840.1 76.093 732 127 7 1 724 1 692 0.0 1069
Msa0365150 AT5G09930.1 71.566 728 153 6 1 724 1 678 0.0 982
Msa0365150 AT5G60790.1 28.366 557 353 7 103 656 66 579 3.41e-68 235
Msa0365150 AT5G60790.1 26.016 246 151 4 457 674 69 311 8.28e-18 88.2
Msa0365150 AT1G64550.1 27.903 577 370 10 96 660 165 707 3.01e-65 230
Msa0365150 AT3G54540.2 27.087 587 360 13 106 662 163 711 5.17e-59 213
Msa0365150 AT3G54540.2 26.421 299 180 5 457 716 163 460 9.96e-24 107
Msa0365150 AT3G54540.1 27.087 587 360 13 106 662 163 711 5.17e-59 213
Msa0365150 AT3G54540.1 26.421 299 180 5 457 716 163 460 9.96e-24 107
Msa0365150 AT1G28010.1 26.961 204 123 6 471 652 389 588 4.27e-13 73.6
Msa0365150 AT1G28010.1 26.396 197 121 6 457 630 1006 1201 1.93e-11 68.2
Msa0365150 AT1G27940.2 25.778 225 137 8 452 652 155 373 5.21e-13 73.2
Msa0365150 AT1G27940.2 26.904 197 120 6 457 630 790 985 1.38e-12 72.0
Msa0365150 AT1G27940.1 25.778 225 137 8 452 652 369 587 9.22e-13 72.8
Msa0365150 AT1G27940.1 26.904 197 120 6 457 630 1004 1199 2.34e-12 71.2
Msa0365150 AT4G33460.1 31.313 198 101 8 457 630 40 226 1.16e-12 69.3
Msa0365150 AT4G25960.1 27.391 230 143 7 468 677 415 640 2.96e-12 70.9
Msa0365150 AT5G52860.1 25.547 274 177 6 476 723 49 321 3.14e-12 70.5
Msa0365150 AT3G28390.1 25.641 234 150 9 468 681 361 590 1.05e-11 69.3
Msa0365150 AT3G28345.1 23.132 281 188 10 454 710 356 632 1.83e-11 68.6
Msa0365150 AT1G10680.1 27.322 183 112 5 468 630 375 556 3.20e-11 67.8
Msa0365150 AT3G28415.2 27.556 225 137 9 471 674 363 582 3.83e-11 67.4
Msa0365150 AT3G28415.1 27.556 225 137 9 471 674 355 574 4.06e-11 67.4
Msa0365150 AT1G10680.2 27.322 183 112 5 468 630 375 556 4.13e-11 67.4
Msa0365150 AT5G46540.1 23.140 242 146 6 432 652 1000 1222 5.01e-11 67.0

Find 199 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTTGCAGTATTATT+TGG 0.118260 3_1:-58910842 Msa0365150:intron
TTGGATTTGGCTTTCAATTT+AGG 0.142201 3_1:+58910757 None:intergenic
TACTTTACTAAAATTGATTA+TGG 0.188943 3_1:-58913630 Msa0365150:CDS
ACCATCAACTCTACTTGTTT+TGG 0.234739 3_1:-58912337 Msa0365150:CDS
ACGAGCTCAGGCTGTGAATT+TGG 0.235081 3_1:-58915288 Msa0365150:CDS
AATGGAGGTTGCGGGGAAAT+TGG 0.247694 3_1:-58915396 Msa0365150:CDS
CTGCGGCTCCTGAAATTTAT+TGG 0.249109 3_1:+58916135 None:intergenic
GGGGTTAGTGTTAGTGTTAA+AGG 0.261654 3_1:+58915874 None:intergenic
GGAGTTGATGGGGAGGCTTT+TGG 0.263336 3_1:-58915333 Msa0365150:CDS
GGTTAATTGGGAAGTGAAAA+AGG 0.267296 3_1:-58915618 Msa0365150:CDS
TCTCTGCCTCACACTTCTTC+CGG 0.280504 3_1:-58916062 Msa0365150:five_prime_UTR
CAGAAATTGGAAAGACTTCT+TGG 0.282365 3_1:-58913934 Msa0365150:CDS
GACGATATTAAAGGACTTCT+TGG 0.283294 3_1:-58913360 Msa0365150:CDS
GGGTTTGGAGGAACCGGATT+CGG 0.286299 3_1:-58915531 Msa0365150:CDS
GACAAACTCCAATAAATTTC+AGG 0.286698 3_1:-58916143 None:intergenic
TACCTTTGACATCTTGGATT+TGG 0.289284 3_1:+58910744 None:intergenic
GAAGTTTACCTTTGACATCT+TGG 0.293270 3_1:+58910738 None:intergenic
GTGGGTTTAGTTGGTGTAAA+TGG 0.300569 3_1:-58915587 Msa0365150:CDS
CTCTGCCTCACACTTCTTCC+GGG 0.303795 3_1:-58916061 Msa0365150:five_prime_UTR
GGTTTGGAGGAACCGGATTC+GGG 0.305619 3_1:-58915530 Msa0365150:CDS
TCCAAAACAAGTAGAGTTGA+TGG 0.315178 3_1:+58912336 None:intergenic
ACAGTTAGGAACTTGGATTT+TGG 0.319199 3_1:-58913826 Msa0365150:CDS
TGAGGGCTCTGTTAATGATT+TGG 0.320174 3_1:-58915354 Msa0365150:CDS
AGTTGCTTACTCGTATTTCA+TGG 0.323148 3_1:+58910215 None:intergenic
ACCTCAAGCATTTCTTTAGA+AGG 0.324032 3_1:+58912288 None:intergenic
GATGAGGATTATTGCGGGTT+TGG 0.324808 3_1:-58915546 Msa0365150:CDS
AGTGTTAGTGTTAAAGGTGT+TGG 0.329787 3_1:+58915880 None:intergenic
ATTATAGCATTTGTGATTCC+TGG 0.339255 3_1:-58910361 Msa0365150:three_prime_UTR
GGAAGATGTTGTGGCGGTTA+TGG 0.342558 3_1:+58916026 None:intergenic
TTAGGTGCCGGAGCAAGTTC+TGG 0.354938 3_1:-58914318 Msa0365150:CDS
AACGGAAACAAATGAAAATC+AGG 0.359605 3_1:-58913885 Msa0365150:CDS
TTAATGCCTGAGCTTGGTTT+TGG 0.368496 3_1:-58915239 Msa0365150:CDS
TGTTAATGATTTGGAGTTGA+TGG 0.369896 3_1:-58915345 Msa0365150:CDS
ACTTTACTAAAATTGATTAT+GGG 0.374049 3_1:-58913629 Msa0365150:CDS
ACAGGCTGAGGCACTTGATC+TGG 0.376554 3_1:-58913433 Msa0365150:intron
TAACTATTTCGAGCAGAATC+AGG 0.381747 3_1:-58913552 Msa0365150:intron
TTCATTTGTTTCCGTTCAAA+TGG 0.384165 3_1:+58913892 None:intergenic
GTGTTAGTGTTAAAGGTGTT+GGG 0.385971 3_1:+58915881 None:intergenic
TTAATCACATTCCCCGAATC+CGG 0.391790 3_1:+58915518 None:intergenic
AAAGAGGAAATGGAGGTTGC+GGG 0.392645 3_1:-58915404 Msa0365150:CDS
ATTGCCATTCTTGGTCCAAA+TGG 0.399808 3_1:-58913665 Msa0365150:CDS
AAAATTGTTCTCTTCATGTA+TGG 0.407853 3_1:+58910513 None:intergenic
GTACTCTTGCCACATCCATT+TGG 0.408591 3_1:+58913650 None:intergenic
TGGAGGAGTGACGATATTAA+AGG 0.411374 3_1:-58913369 Msa0365150:CDS
GGTGAGAAAGTGGGTTTAGT+TGG 0.417873 3_1:-58915596 Msa0365150:CDS
TTAGATTTATTCACCAAATG+AGG 0.419755 3_1:-58910492 Msa0365150:three_prime_UTR
TCATCTAACAACAACAAATC+TGG 0.426653 3_1:+58914612 None:intergenic
CTCCGGTGAGGTCGAGGTGG+TGG 0.428069 3_1:+58915966 None:intergenic
GGCAAATCTTACAATTGAAA+GGG 0.431561 3_1:-58913696 Msa0365150:CDS
TGATTCTGCTCGAAATAGTT+AGG 0.432066 3_1:+58913554 None:intergenic
TGGCGGATAAACGTGAAGTA+TGG 0.432387 3_1:+58915822 None:intergenic
TAGAGGAAGCTGCAGAGGAC+TGG 0.433639 3_1:-58913389 Msa0365150:CDS
TTTGAGGTGAAGAATCGATT+GGG 0.438346 3_1:+58915854 None:intergenic
GGCGCTTCAAGCGTTTCATC+TGG 0.439525 3_1:-58915695 Msa0365150:CDS
TGTAGAGGATTCTGATAGGT+TGG 0.440022 3_1:-58915216 Msa0365150:CDS
AGTGTTAAAGGTGTTGGGTT+TGG 0.440467 3_1:+58915886 None:intergenic
AGATTGGACATGTCTTCAAT+TGG 0.442435 3_1:-58914960 Msa0365150:CDS
AGGATAACTTCACCGCTGAT+TGG 0.444666 3_1:+58913596 None:intergenic
TTAGTTGGTGTAAATGGTGC+GGG 0.446261 3_1:-58915581 Msa0365150:CDS
AGAGAGTTGATAAGCAGGTT+AGG 0.447090 3_1:-58914336 Msa0365150:CDS
CGATGAGATGAGTGTGGGAT+AGG 0.448984 3_1:+58915909 None:intergenic
TATTGCGGGTTTGGAGGAAC+CGG 0.451248 3_1:-58915537 Msa0365150:CDS
TCAAGATCAAGGTGATTTGT+AGG 0.461063 3_1:+58914588 None:intergenic
TCTCTTCATGTATGGTGTAA+TGG 0.464376 3_1:+58910521 None:intergenic
TCAGCGGTGAAGTTATCCTT+GGG 0.465273 3_1:-58913592 Msa0365150:CDS
TGGAGAAGAATCTTGATGCC+AGG 0.465875 3_1:-58910822 Msa0365150:CDS
TGTTGTAACAGTTAGGAACT+TGG 0.467480 3_1:-58913833 Msa0365150:CDS
TTGGTGTAGAGGATTCTGAT+AGG 0.471996 3_1:-58915220 Msa0365150:CDS
GTCGAGTCTGTATTGGAGAT+TGG 0.473729 3_1:-58914976 Msa0365150:CDS
GAGGATTATTGCGGGTTTGG+AGG 0.476967 3_1:-58915543 Msa0365150:CDS
ATCAGCGGTGAAGTTATCCT+TGG 0.477715 3_1:-58913593 Msa0365150:CDS
CTTTGTCGTCAAGCTCAGCC+TGG 0.480481 3_1:+58910782 None:intergenic
AGTTTCATCCACGGCGGCGA+TGG 0.482363 3_1:+58915802 None:intergenic
ACATCCATTTGGACCAAGAA+TGG 0.482881 3_1:+58913661 None:intergenic
GTTAATGATTTGGAGTTGAT+GGG 0.485283 3_1:-58915344 Msa0365150:CDS
TTTGCTTCAGAGACGAGCTC+AGG 0.488113 3_1:-58915300 Msa0365150:CDS
ACGATATTAAAGGACTTCTT+GGG 0.489351 3_1:-58913359 Msa0365150:CDS
CCATTGTGTTTGAAGATGAT+CGG 0.490033 3_1:+58916005 None:intergenic
GTTTGCTCAATAACATTGGT+GGG 0.491182 3_1:-58916109 Msa0365150:five_prime_UTR
AAGTGTGAGGCAGAGAAAGA+AGG 0.492640 3_1:+58916069 None:intergenic
AGTTAAAGATGGCACTGTGC+AGG 0.495959 3_1:-58912042 Msa0365150:CDS
AGGCAAATCTTACAATTGAA+AGG 0.498825 3_1:-58913697 Msa0365150:CDS
GAAGATCTGTTGTAACAGTT+AGG 0.500389 3_1:-58913840 Msa0365150:CDS
GGGTGTATCCAGGACATTTG+AGG 0.501010 3_1:-58914451 Msa0365150:CDS
ATATTCTTTCAAAGGCGACT+TGG 0.503007 3_1:-58914413 Msa0365150:CDS
TTCTCAGTATATTCTTTCAA+AGG 0.503936 3_1:-58914421 Msa0365150:CDS
ACACAGATGAGGATTATTGC+GGG 0.504248 3_1:-58915551 Msa0365150:CDS
TTGTATATATCATGTCTCAA+TGG 0.506183 3_1:-58910427 Msa0365150:three_prime_UTR
ATAATTTCCCTCAAATGTCC+TGG 0.507523 3_1:+58914443 None:intergenic
GGATGAACCAACGAATCACT+TGG 0.511588 3_1:-58912316 Msa0365150:CDS
GGTATATCCAAGTGATTCGT+TGG 0.512337 3_1:+58912309 None:intergenic
CTTCCACTGCTTCCACGCAC+AGG 0.512959 3_1:+58913859 None:intergenic
CCGTGCTTCAACTGCTGAGA+AGG 0.517152 3_1:-58914295 Msa0365150:intron
TGAAGATTATCTTAACAAGC+AGG 0.517743 3_1:-58914550 Msa0365150:CDS
ACTCAATTGTGTCAAGATCA+AGG 0.517929 3_1:+58914577 None:intergenic
GTGCAAAGAATTCAAAGAGA+TGG 0.519064 3_1:-58910560 Msa0365150:CDS
GGCACTGTGCAGGATTATGC+TGG 0.519823 3_1:-58912032 Msa0365150:CDS
AGATGAAACGCTTGAAGCGC+CGG 0.520147 3_1:+58915697 None:intergenic
TAAAGAGGAAATGGAGGTTG+CGG 0.520716 3_1:-58915405 Msa0365150:CDS
TGTCAGTGTCGAGTCTGTAT+TGG 0.521180 3_1:-58914983 Msa0365150:intron
AGTAAGTTAATGCCTGAGCT+TGG 0.521776 3_1:-58915245 Msa0365150:CDS
GTTGCTTACTCGTATTTCAT+GGG 0.521814 3_1:+58910216 None:intergenic
TGAATGCTCCGGTGAGGTCG+AGG 0.525529 3_1:+58915960 None:intergenic
AGCACGGCCAGAACTTGCTC+CGG 0.526254 3_1:+58914311 None:intergenic
AAAGTGCAGAAGGCGCTTGA+GGG 0.528862 3_1:-58915371 Msa0365150:CDS
TAGATTTATTCACCAAATGA+GGG 0.529000 3_1:-58910491 Msa0365150:three_prime_UTR
GGTGTATCCAGGACATTTGA+GGG 0.529834 3_1:-58914450 Msa0365150:CDS
CAAGCAAAACAGAAGTCTAA+AGG 0.530649 3_1:-58910582 Msa0365150:CDS
TTCCCTGTGCGTGGAAGCAG+TGG 0.531912 3_1:-58913862 Msa0365150:CDS
TTCAACTGAAGTTTCATCCA+CGG 0.536805 3_1:+58915793 None:intergenic
GACAGTAGAGGAAGCTGCAG+AGG 0.537160 3_1:-58913394 Msa0365150:CDS
TCGTTCATCGACTGAAGTAT+CGG 0.540248 3_1:+58915745 None:intergenic
TGAGACATGATATATACAAA+AGG 0.541276 3_1:+58910431 None:intergenic
AGTTTGCTCAATAACATTGG+TGG 0.547012 3_1:-58916110 Msa0365150:five_prime_UTR
GAAAGTGCAGAAGGCGCTTG+AGG 0.547913 3_1:-58915372 Msa0365150:CDS
AAACTGACATGGGTGTATCC+AGG 0.548307 3_1:-58914461 Msa0365150:CDS
ATCATGAGATACGGTGATAA+CGG 0.548364 3_1:+58912103 None:intergenic
CTCCACCACCTCGACCTCAC+CGG 0.548859 3_1:-58915968 Msa0365150:CDS
TCTATTGAGTGGTGGTGAGA+AGG 0.550123 3_1:-58913295 Msa0365150:intron
TGTGGGATAGGGTGCGTGGA+AGG 0.551650 3_1:+58915921 None:intergenic
TTGATAAGCAGGTTAGGTGC+CGG 0.551653 3_1:-58914330 Msa0365150:CDS
AAGGAAGAAGCAAAAGATGC+AGG 0.553204 3_1:-58910613 Msa0365150:CDS
AGAGTGATTGAAGTTAAAGA+TGG 0.555267 3_1:-58912053 Msa0365150:CDS
TTGAGGTGAAGAATCGATTG+GGG 0.556566 3_1:+58915855 None:intergenic
TGAAACACAGTATGCTGCAT+GGG 0.558064 3_1:-58914388 Msa0365150:CDS
GGAGAAGAATCTTGATGCCA+GGG 0.558623 3_1:-58910821 Msa0365150:CDS
TATGTCTGGCACAAAACGAC+TGG 0.560418 3_1:+58910180 None:intergenic
AAACAAGAGAGTTGATAAGC+AGG 0.561228 3_1:-58914341 Msa0365150:CDS
TTACAGTCTCAACAACAACT+TGG 0.561617 3_1:-58910332 Msa0365150:three_prime_UTR
GTTTGGCGATGAGATGAGTG+TGG 0.563673 3_1:+58915903 None:intergenic
AATTTGAGGTTTCGCAGAGT+AGG 0.564026 3_1:-58915457 Msa0365150:CDS
TTCATCCACGGCGGCGATGG+CGG 0.566025 3_1:+58915805 None:intergenic
GAAAGTTTGCTCAATAACAT+TGG 0.566811 3_1:-58916113 Msa0365150:five_prime_UTR
TCATGTATGGTGTAATGGAA+TGG 0.574779 3_1:+58910526 None:intergenic
TTTAGTTGGTGTAAATGGTG+CGG 0.576828 3_1:-58915582 Msa0365150:CDS
AAAATCAGGTTCCCTGTGCG+TGG 0.579340 3_1:-58913871 Msa0365150:CDS
AGGAAGCTGCAGAGGACTGG+AGG 0.580227 3_1:-58913386 Msa0365150:CDS
TCTACACCAAAACCAAGCTC+AGG 0.581292 3_1:+58915233 None:intergenic
TTGAGACTGTAAACTTCACC+AGG 0.588650 3_1:+58910343 None:intergenic
TTCGCAGAGTAGGACGGTGA+GGG 0.588910 3_1:-58915447 Msa0365150:CDS
TTCCACTGCTTCCACGCACA+GGG 0.589830 3_1:+58913860 None:intergenic
CGTAAAGTTTCTCTATTGAG+TGG 0.590268 3_1:-58913306 Msa0365150:CDS
TTGATCTTGACACAATTGAG+TGG 0.591241 3_1:-58914575 Msa0365150:CDS
ATGATTTGGAGTTGATGGGG+AGG 0.592271 3_1:-58915340 Msa0365150:CDS
GGCACTTGATCTGGAAAAGA+CGG 0.593050 3_1:-58913424 Msa0365150:CDS
AGAATCGAGAATGAATGCTC+CGG 0.594116 3_1:+58915949 None:intergenic
TTAATGATTTGGAGTTGATG+GGG 0.598503 3_1:-58915343 Msa0365150:CDS
GATTTATTCACCAAATGAGG+GGG 0.599202 3_1:-58910489 Msa0365150:three_prime_UTR
GAAATTGGAGAAAGTGCAGA+AGG 0.599509 3_1:-58915381 Msa0365150:CDS
GATGAGATGAGTGTGGGATA+GGG 0.605531 3_1:+58915910 None:intergenic
AAAGTACCGATCATGAGATA+CGG 0.606013 3_1:+58912094 None:intergenic
GTTATTGAGCAAACTTTCTG+CGG 0.609076 3_1:+58916118 None:intergenic
GACACAGATGAGGATTATTG+CGG 0.609481 3_1:-58915552 Msa0365150:CDS
TTTGCTCAATAACATTGGTG+GGG 0.610002 3_1:-58916108 Msa0365150:five_prime_UTR
CCGATCATCTTCAAACACAA+TGG 0.610009 3_1:-58916005 Msa0365150:exon
AACAATAAACAATCTAACAC+CGG 0.610875 3_1:-58915716 Msa0365150:CDS
AAGAGGAAATGGAGGTTGCG+GGG 0.614608 3_1:-58915403 Msa0365150:CDS
TGAGGTTTCGCAGAGTAGGA+CGG 0.614833 3_1:-58915453 Msa0365150:CDS
AGCCAAATCCAAGATGTCAA+AGG 0.614850 3_1:-58910746 Msa0365150:intron
CCTTCTCAGCAGTTGAAGCA+CGG 0.617528 3_1:+58914295 None:intergenic
GCAAATCTTACAATTGAAAG+GGG 0.619588 3_1:-58913695 Msa0365150:CDS
AGATTTATTCACCAAATGAG+GGG 0.619882 3_1:-58910490 Msa0365150:three_prime_UTR
AAGATGATCGGAAGATGTTG+TGG 0.626425 3_1:+58916017 None:intergenic
TCGTGAGAAATGATAACCAT+CGG 0.626896 3_1:+58914522 None:intergenic
GTTTGGAGGAACCGGATTCG+GGG 0.627351 3_1:-58915529 Msa0365150:CDS
AAAGTTTCTCTATTGAGTGG+TGG 0.627890 3_1:-58913303 Msa0365150:CDS
ATCAGGCTGAGAAAGAAGCA+AGG 0.628611 3_1:-58910632 Msa0365150:intron
TTTATCCGCCATCGCCGCCG+TGG 0.629787 3_1:-58915810 Msa0365150:CDS
ATTCTTGGTCCAAATGGATG+TGG 0.633025 3_1:-58913659 Msa0365150:CDS
TGAGTGTGGGATAGGGTGCG+TGG 0.633289 3_1:+58915917 None:intergenic
TAACAAGCAGGATGTGCCGA+TGG 0.633293 3_1:-58914538 Msa0365150:CDS
CGGGGAAGACGACACAGATG+AGG 0.633929 3_1:-58915562 Msa0365150:CDS
ATTGGAAAGACTTCTTGGAG+AGG 0.634177 3_1:-58913929 Msa0365150:CDS
TGGCAGATGAGGATGTGTCT+TGG 0.636187 3_1:-58915173 Msa0365150:CDS
TAGTAGAAAAGCCATTTGAA+CGG 0.638546 3_1:-58913903 Msa0365150:CDS
CAATTGGAAGTGTCTAGTGG+TGG 0.645556 3_1:-58914944 Msa0365150:CDS
GACGGTGCTTGAGACAGTAG+AGG 0.647160 3_1:-58913406 Msa0365150:CDS
TTAGTGGTGGATGGCAGATG+AGG 0.647334 3_1:-58915184 Msa0365150:CDS
TAGTTGGTGTAAATGGTGCG+GGG 0.649027 3_1:-58915580 Msa0365150:CDS
TTTCGCAGAGTAGGACGGTG+AGG 0.649818 3_1:-58915448 Msa0365150:CDS
TTTGGCGATGAGATGAGTGT+GGG 0.650568 3_1:+58915904 None:intergenic
GTAATACATTATGCTCCCCA+AGG 0.655544 3_1:+58913576 None:intergenic
CTTCAATTGGAAGTGTCTAG+TGG 0.660247 3_1:-58914947 Msa0365150:CDS
TTATCACCGTATCTCATGAT+CGG 0.661904 3_1:-58912100 Msa0365150:CDS
ACCTTCTAAAGAAATGCTTG+AGG 0.662881 3_1:-58912289 Msa0365150:intron
TTGAAACACAGTATGCTGCA+TGG 0.664460 3_1:-58914389 Msa0365150:CDS
TGGTGGTATTGCAAATTGCA+TGG 0.677034 3_1:-58914927 Msa0365150:intron
GGAGGCAATAAACGAGTACG+AGG 0.681962 3_1:-58912129 Msa0365150:CDS
CGAGAATGAATGCTCCGGTG+AGG 0.684460 3_1:+58915954 None:intergenic
CAGCGGTGAAGTTATCCTTG+GGG 0.685607 3_1:-58913591 Msa0365150:CDS
ATGATCGGAAGATGTTGTGG+CGG 0.686114 3_1:+58916020 None:intergenic
GGTTTAGAGAAGCCAATCAG+CGG 0.693977 3_1:-58913608 Msa0365150:CDS
ATGCTCCGGTGAGGTCGAGG+TGG 0.714725 3_1:+58915963 None:intergenic
AACTGAAGTTTCATCCACGG+CGG 0.723455 3_1:+58915796 None:intergenic
AAAATTGTGGAAACTGACAT+GGG 0.723967 3_1:-58914471 Msa0365150:CDS
AAACACATTAGCATCCGCTG+TGG 0.734759 3_1:-58910259 Msa0365150:three_prime_UTR
ATACGAGTAAGCAACTGACG+TGG 0.746420 3_1:-58910208 Msa0365150:three_prime_UTR
GAGGCAATAAACGAGTACGA+GGG 0.765833 3_1:-58912128 Msa0365150:CDS
AAATAGCATTAAGACCACAG+CGG 0.779665 3_1:+58910245 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTTATCATTTAAAAATAA+CGG + chr3_1:58911493-58911512 None:intergenic 10.0%
!! TTTAAATGATAAATCAATAA+AGG - chr3_1:58911498-58911517 Msa0365150:intron 10.0%
!! TTAAATGATAAATCAATAAA+GGG - chr3_1:58911499-58911518 Msa0365150:intron 10.0%
!!! AAACATTAATTTTTACAATA+CGG + chr3_1:58912283-58912302 None:intergenic 10.0%
!!! TTTTTTTTACTAAAATTAAG+GGG - chr3_1:58915064-58915083 Msa0365150:intron 10.0%
!! ATATTCATTATATACAAAAA+TGG + chr3_1:58915366-58915385 None:intergenic 10.0%
!! AATATTAGAAAAACTTACAA+AGG - chr3_1:58910635-58910654 Msa0365150:intron 15.0%
!! AAAAAGAATACAAATGATTA+TGG - chr3_1:58911437-58911456 Msa0365150:intron 15.0%
!! TATTTAAGTGACTAATATTA+AGG + chr3_1:58912200-58912219 None:intergenic 15.0%
!!! TTCTTTTAAGTAAATAACAT+AGG + chr3_1:58912318-58912337 None:intergenic 15.0%
!! TACTTTACTAAAATTGATTA+TGG - chr3_1:58912664-58912683 Msa0365150:intron 15.0%
!! ACTTTACTAAAATTGATTAT+GGG - chr3_1:58912665-58912684 Msa0365150:intron 15.0%
!!! TTCTTAAATTTCTTTAAAGA+CGG + chr3_1:58913308-58913327 None:intergenic 15.0%
!! TTTAAAGAAATTTAAGAAAC+AGG - chr3_1:58913310-58913329 Msa0365150:CDS 15.0%
!!! TAAATGTATTTGACAATTTT+GGG - chr3_1:58913416-58913435 Msa0365150:CDS 15.0%
!! CAAAAAAAAAAGAAAACATT+AGG + chr3_1:58914089-58914108 None:intergenic 15.0%
!! AGTATATTTAAACAATCTAT+GGG + chr3_1:58914344-58914363 None:intergenic 15.0%
!! AAGTATATTTAAACAATCTA+TGG + chr3_1:58914345-58914364 None:intergenic 15.0%
!!! ATTGATTTATTTGAAAAATC+AGG - chr3_1:58915645-58915664 Msa0365150:CDS 15.0%
!! AAAAAATCAATATTTATGTC+TGG + chr3_1:58916131-58916150 None:intergenic 15.0%
!!! AAAAACGCAATTTTCATATT+TGG + chr3_1:58910809-58910828 None:intergenic 20.0%
!! AATGATTATGGTTAGTAATT+AGG - chr3_1:58911449-58911468 Msa0365150:intron 20.0%
!!! ATTGCAATTTACAACTATTT+TGG + chr3_1:58912252-58912271 None:intergenic 20.0%
!!! ATTAATTTTTACAATACGGA+AGG + chr3_1:58912279-58912298 None:intergenic 20.0%
!!! AAAGTTTTGAAATGAAGAAT+TGG + chr3_1:58912811-58912830 None:intergenic 20.0%
!!! AAAGATTTTCAAAATGTCTA+AGG + chr3_1:58913230-58913249 None:intergenic 20.0%
!!! GTAAATGTATTTGACAATTT+TGG - chr3_1:58913415-58913434 Msa0365150:CDS 20.0%
!! ATGATTTATTCCTGATAAAA+AGG - chr3_1:58913529-58913548 Msa0365150:intron 20.0%
!! TGATTTATTCCTGATAAAAA+GGG - chr3_1:58913530-58913549 Msa0365150:intron 20.0%
!! TGAACATTAAATACAGATAA+AGG + chr3_1:58914052-58914071 None:intergenic 20.0%
!! AAATTAAAACAGAATACATC+AGG + chr3_1:58914709-58914728 None:intergenic 20.0%
!!! TGATGTATTCTGTTTTAATT+TGG - chr3_1:58914708-58914727 Msa0365150:intron 20.0%
!!! CCATATTTTACTTTTTGAAA+GGG + chr3_1:58914821-58914840 None:intergenic 20.0%
!!! TCCATATTTTACTTTTTGAA+AGG + chr3_1:58914822-58914841 None:intergenic 20.0%
!! TAAATTATACCCTCAAAATT+AGG + chr3_1:58915247-58915266 None:intergenic 20.0%
!! TTGAATCATTCAATGAAAAA+TGG + chr3_1:58915306-58915325 None:intergenic 20.0%
!! CATGTTTGTTTATTGTTATA+GGG - chr3_1:58915409-58915428 Msa0365150:CDS 20.0%
!! TGAAAATTTGCAGTATTATT+TGG - chr3_1:58915452-58915471 Msa0365150:CDS 20.0%
! AACAATAAACAATCTAACAC+CGG - chr3_1:58910578-58910597 Msa0365150:CDS 25.0%
!!! AAAAACTTACAAAGGTGTTA+CGG - chr3_1:58910643-58910662 Msa0365150:intron 25.0%
!!! ATTTATGAGTGCTTTTAAAG+AGG - chr3_1:58910874-58910893 Msa0365150:intron 25.0%
! AGTATATTGTGTATGTGTAT+AGG - chr3_1:58911187-58911206 Msa0365150:intron 25.0%
!!! CAATTTTCTAAAATCAGTGT+CGG + chr3_1:58911262-58911281 None:intergenic 25.0%
! AATCTAGTTGTTGTCTAAAA+GGG + chr3_1:58911405-58911424 None:intergenic 25.0%
! AAATCTAGTTGTTGTCTAAA+AGG + chr3_1:58911406-58911425 None:intergenic 25.0%
!!! ATCATTTAAAAATAACGGAC+TGG + chr3_1:58911488-58911507 None:intergenic 25.0%
! TCAACTATGTACAAAAATTG+TGG - chr3_1:58911810-58911829 Msa0365150:intron 25.0%
! TTCTCAGTATATTCTTTCAA+AGG - chr3_1:58911873-58911892 Msa0365150:intron 25.0%
!!! AGTCAAAAGTACTCATTAAA+TGG - chr3_1:58912078-58912097 Msa0365150:CDS 25.0%
!!! GTCAAAAGTACTCATTAAAT+GGG - chr3_1:58912079-58912098 Msa0365150:CDS 25.0%
!! ATCTCAATCCTTATGATTTT+GGG + chr3_1:58912120-58912139 None:intergenic 25.0%
!! AATCTCAATCCTTATGATTT+TGG + chr3_1:58912121-58912140 None:intergenic 25.0%
! TTATATATCTAGTGCTATGA+TGG - chr3_1:58912148-58912167 Msa0365150:intron 25.0%
! CTTAAACTTTGTTAGACATA+TGG + chr3_1:58912174-58912193 None:intergenic 25.0%
! ACTTAAATAACCCAAAAATG+CGG - chr3_1:58912211-58912230 Msa0365150:intron 25.0%
!!! AGCTTATTTCTATGATTGAA+TGG - chr3_1:58913106-58913125 Msa0365150:intron 25.0%
! TTAAGAAACAGGAACTAAAA+TGG - chr3_1:58913321-58913340 Msa0365150:CDS 25.0%
!!! GATTCTTTTTCAACTTGTTT+TGG - chr3_1:58913393-58913412 Msa0365150:CDS 25.0%
! TATATGCATTTAGTGAGAAA+GGG + chr3_1:58913862-58913881 None:intergenic 25.0%
! TTATATGCATTTAGTGAGAA+AGG + chr3_1:58913863-58913882 None:intergenic 25.0%
! CATATAATGCAACACTATTA+GGG - chr3_1:58913876-58913895 Msa0365150:CDS 25.0%
! ATATAATGCAACACTATTAG+GGG - chr3_1:58913877-58913896 Msa0365150:CDS 25.0%
!! ATATTGTTCCATGTTTTACT+AGG - chr3_1:58913903-58913922 Msa0365150:CDS 25.0%
! AGGTAAGAAAAAAAATGAGA+CGG + chr3_1:58914032-58914051 None:intergenic 25.0%
! TGATTTATAATTCTTCTACC+AGG - chr3_1:58914144-58914163 Msa0365150:intron 25.0%
! CATGTAATACTAATGATCAA+TGG + chr3_1:58914440-58914459 None:intergenic 25.0%
!!! GTATTACATGTGTTTTTAGT+TGG - chr3_1:58914450-58914469 Msa0365150:CDS 25.0%
! TTAAGAAAATTGAGGAATGA+GGG + chr3_1:58914542-58914561 None:intergenic 25.0%
! ATAATAAGATGTGAGAAATG+AGG + chr3_1:58914608-58914627 None:intergenic 25.0%
! AAATAAAGTGAAGAATCTGA+GGG + chr3_1:58914663-58914682 None:intergenic 25.0%
!! TCAGATTCTTCACTTTATTT+GGG - chr3_1:58914663-58914682 Msa0365150:intron 25.0%
! ATGTAAAATTCCTATCACAA+AGG + chr3_1:58914736-58914755 None:intergenic 25.0%
!!! TTTTTTTTCAACAGCATATC+TGG - chr3_1:58914771-58914790 Msa0365150:intron 25.0%
! CCCTTTCAAAAAGTAAAATA+TGG - chr3_1:58914818-58914837 Msa0365150:intron 25.0%
! AAATAACTTAGACGATCAAA+CGG - chr3_1:58914983-58915002 Msa0365150:intron 25.0%
! TGAATGATTCAATAGACATA+TGG - chr3_1:58915314-58915333 Msa0365150:CDS 25.0%
! AACAATAAACAAACATGCAT+TGG + chr3_1:58915406-58915425 None:intergenic 25.0%
! GCATGTTTGTTTATTGTTAT+AGG - chr3_1:58915408-58915427 Msa0365150:CDS 25.0%
! AAAATTGTTCTCTTCATGTA+TGG + chr3_1:58915784-58915803 None:intergenic 25.0%
! TTAGATTTATTCACCAAATG+AGG - chr3_1:58915802-58915821 Msa0365150:CDS 25.0%
! TAGATTTATTCACCAAATGA+GGG - chr3_1:58915803-58915822 Msa0365150:CDS 25.0%
! TGAGACATGATATATACAAA+AGG + chr3_1:58915866-58915885 None:intergenic 25.0%
! TTGTATATATCATGTCTCAA+TGG - chr3_1:58915867-58915886 Msa0365150:CDS 25.0%
! GAAAGTTTGCTCAATAACAT+TGG - chr3_1:58910181-58910200 Msa0365150:three_prime_UTR 30.0%
!!! AGTATGGTTGAGTTTTTTTG+AGG + chr3_1:58910459-58910478 None:intergenic 30.0%
!!! GGTTTTGAAAGAGGTTAATT+GGG - chr3_1:58910664-58910683 Msa0365150:intron 30.0%
GTTAATTGGGAAGTGAAAAA+GGG - chr3_1:58910677-58910696 Msa0365150:intron 30.0%
! TGTTAATGATTTGGAGTTGA+TGG - chr3_1:58910949-58910968 Msa0365150:intron 30.0%
! GTTAATGATTTGGAGTTGAT+GGG - chr3_1:58910950-58910969 Msa0365150:intron 30.0%
!! TTAATGATTTGGAGTTGATG+GGG - chr3_1:58910951-58910970 Msa0365150:intron 30.0%
!! ATAACCAATGTTACTTTGCA+AGG - chr3_1:58911569-58911588 Msa0365150:intron 30.0%
!! GACACTTAGTTTTCAATTTC+AGG - chr3_1:58911657-58911676 Msa0365150:intron 30.0%
TCATCTAACAACAACAAATC+TGG + chr3_1:58911685-58911704 None:intergenic 30.0%
TGAAGATTATCTTAACAAGC+AGG - chr3_1:58911744-58911763 Msa0365150:intron 30.0%
AAAAATTGTGGAAACTGACA+TGG - chr3_1:58911822-58911841 Msa0365150:intron 30.0%
AAAATTGTGGAAACTGACAT+GGG - chr3_1:58911823-58911842 Msa0365150:intron 30.0%
TCTGTTGTCACATATACATA+AGG + chr3_1:58912344-58912363 None:intergenic 30.0%
GTATATGTGACAACAGAAAT+TGG - chr3_1:58912347-58912366 Msa0365150:CDS 30.0%
TAGTAGAAAAGCCATTTGAA+CGG - chr3_1:58912391-58912410 Msa0365150:intron 30.0%
TTCATTTGTTTCCGTTCAAA+TGG + chr3_1:58912405-58912424 None:intergenic 30.0%
AACGGAAACAAATGAAAATC+AGG - chr3_1:58912409-58912428 Msa0365150:intron 30.0%
AGGCAAATCTTACAATTGAA+AGG - chr3_1:58912597-58912616 Msa0365150:intron 30.0%
GGCAAATCTTACAATTGAAA+GGG - chr3_1:58912598-58912617 Msa0365150:intron 30.0%
GCAAATCTTACAATTGAAAG+GGG - chr3_1:58912599-58912618 Msa0365150:intron 30.0%
TTGACTGAGAAAATGCTATT+TGG - chr3_1:58912774-58912793 Msa0365150:intron 30.0%
ACGATATTAAAGGACTTCTT+GGG - chr3_1:58912935-58912954 Msa0365150:intron 30.0%
! AGCAATATCATCTAATTTGC+GGG + chr3_1:58913199-58913218 None:intergenic 30.0%
CAGCAATATCATCTAATTTG+CGG + chr3_1:58913200-58913219 None:intergenic 30.0%
AACAAACAACCACATTTCAA+AGG + chr3_1:58913261-58913280 None:intergenic 30.0%
AAACTATTTACATGCTTCCA+TGG - chr3_1:58913787-58913806 Msa0365150:intron 30.0%
GCATATAATGCAACACTATT+AGG - chr3_1:58913875-58913894 Msa0365150:CDS 30.0%
AAAGAAAACATTAGGCTGAT+GGG + chr3_1:58914081-58914100 None:intergenic 30.0%
AAAAGAAAACATTAGGCTGA+TGG + chr3_1:58914082-58914101 None:intergenic 30.0%
! AATCAATATTAGTCTGTCCT+TGG + chr3_1:58914129-58914148 None:intergenic 30.0%
TTTATAATTCTTCTACCAGG+AGG - chr3_1:58914147-58914166 Msa0365150:intron 30.0%
AGAGTGATTGAAGTTAAAGA+TGG - chr3_1:58914241-58914260 Msa0365150:intron 30.0%
!!! TGTGTTTTTAGTTGGATTCT+TGG - chr3_1:58914458-58914477 Msa0365150:CDS 30.0%
AATCATCATTTGCATCTAGA+TGG + chr3_1:58914504-58914523 None:intergenic 30.0%
! CTAGATGCAAATGATGATTT+TGG - chr3_1:58914505-58914524 Msa0365150:CDS 30.0%
GTTAAGAAAATTGAGGAATG+AGG + chr3_1:58914543-58914562 None:intergenic 30.0%
CAAATAAAGTGAAGAATCTG+AGG + chr3_1:58914664-58914683 None:intergenic 30.0%
CTCAGATTCTTCACTTTATT+TGG - chr3_1:58914662-58914681 Msa0365150:intron 30.0%
AAAACAGAATACATCAGGTA+GGG + chr3_1:58914704-58914723 None:intergenic 30.0%
TAAAACAGAATACATCAGGT+AGG + chr3_1:58914705-58914724 None:intergenic 30.0%
! TAATTTGGTTCCTTTGTGAT+AGG - chr3_1:58914723-58914742 Msa0365150:intron 30.0%
TCAGTCTTTCATTTCATAAG+TGG - chr3_1:58914887-58914906 Msa0365150:intron 30.0%
TCTTTCATTTCATAAGTGGA+AGG - chr3_1:58914891-58914910 Msa0365150:intron 30.0%
TTTCATAAGTGGAAGGATAT+AGG - chr3_1:58914898-58914917 Msa0365150:intron 30.0%
CATTCAATGAAAAATGGCTT+CGG + chr3_1:58915300-58915319 None:intergenic 30.0%
!! TTGGATTTGGCTTTCAATTT+AGG + chr3_1:58915540-58915559 None:intergenic 30.0%
AGATTTATTCACCAAATGAG+GGG - chr3_1:58915804-58915823 Msa0365150:CDS 30.0%
ATTATAGCATTTGTGATTCC+TGG - chr3_1:58915933-58915952 Msa0365150:CDS 30.0%
GTTATTGAGCAAACTTTCTG+CGG + chr3_1:58910179-58910198 None:intergenic 35.0%
! AGTTTGCTCAATAACATTGG+TGG - chr3_1:58910184-58910203 Msa0365150:three_prime_UTR 35.0%
GTTTGCTCAATAACATTGGT+GGG - chr3_1:58910185-58910204 Msa0365150:three_prime_UTR 35.0%
TTTGCTCAATAACATTGGTG+GGG - chr3_1:58910186-58910205 Msa0365150:three_prime_UTR 35.0%
!!! TTATGGAAGAGTGTTTTACC+CGG + chr3_1:58910254-58910273 None:intergenic 35.0%
CCATTGTGTTTGAAGATGAT+CGG + chr3_1:58910292-58910311 None:intergenic 35.0%
!! GTGTTAGTGTTAAAGGTGTT+GGG + chr3_1:58910416-58910435 None:intergenic 35.0%
! AGTGTTAGTGTTAAAGGTGT+TGG + chr3_1:58910417-58910436 None:intergenic 35.0%
! TTTGAGGTGAAGAATCGATT+GGG + chr3_1:58910443-58910462 None:intergenic 35.0%
!!! TTTTGAGGTGAAGAATCGAT+TGG + chr3_1:58910444-58910463 None:intergenic 35.0%
TTCAACTGAAGTTTCATCCA+CGG + chr3_1:58910504-58910523 None:intergenic 35.0%
!!! CGGTTTTGAAAGAGGTTAAT+TGG - chr3_1:58910663-58910682 Msa0365150:intron 35.0%
GGTTAATTGGGAAGTGAAAA+AGG - chr3_1:58910676-58910695 Msa0365150:intron 35.0%
! TTTAGTTGGTGTAAATGGTG+CGG - chr3_1:58910712-58910731 Msa0365150:intron 35.0%
!!! GAAAATTGCGTTTTTGAGTC+AGG - chr3_1:58910814-58910833 Msa0365150:CDS 35.0%
!!! GTTTTTGAGTCAGGAATTTG+AGG - chr3_1:58910823-58910842 Msa0365150:CDS 35.0%
!! GAGTGCTTTTAAAGAGGAAA+TGG - chr3_1:58910880-58910899 Msa0365150:intron 35.0%
!! TGCTTTTAAAGAGGAAATGG+AGG - chr3_1:58910883-58910902 Msa0365150:intron 35.0%
! TCTTGGCAAGATTTTACTTC+AGG - chr3_1:58911138-58911157 Msa0365150:intron 35.0%
AGATTGGACATGTCTTCAAT+TGG - chr3_1:58911334-58911353 Msa0365150:intron 35.0%
TATATCAGCATTACAGCCTA+TGG + chr3_1:58911552-58911571 None:intergenic 35.0%
TACACCTTGCAAAGTAACAT+TGG + chr3_1:58911576-58911595 None:intergenic 35.0%
! GAGTTTGAATGTGAAAGTGT+TGG - chr3_1:58911624-58911643 Msa0365150:intron 35.0%
! TCAAGATCAAGGTGATTTGT+AGG + chr3_1:58911709-58911728 None:intergenic 35.0%
ACTCAATTGTGTCAAGATCA+AGG + chr3_1:58911720-58911739 None:intergenic 35.0%
TTGATCTTGACACAATTGAG+TGG - chr3_1:58911719-58911738 Msa0365150:intron 35.0%
TCGTGAGAAATGATAACCAT+CGG + chr3_1:58911775-58911794 None:intergenic 35.0%
ATAATTTCCCTCAAATGTCC+TGG + chr3_1:58911854-58911873 None:intergenic 35.0%
ATATTCTTTCAAAGGCGACT+TGG - chr3_1:58911881-58911900 Msa0365150:intron 35.0%
!! AAACAAGAGAGTTGATAAGC+AGG - chr3_1:58911953-58911972 Msa0365150:intron 35.0%
!! CCTTATGATTTTGGGAGAAT+TGG + chr3_1:58912112-58912131 None:intergenic 35.0%
CCAATTCTCCCAAAATCATA+AGG - chr3_1:58912109-58912128 Msa0365150:CDS 35.0%
! AACACTACTACCGCATTTTT+GGG + chr3_1:58912224-58912243 None:intergenic 35.0%
CAGAAATTGGAAAGACTTCT+TGG - chr3_1:58912360-58912379 Msa0365150:CDS 35.0%
GAAGATCTGTTGTAACAGTT+AGG - chr3_1:58912454-58912473 Msa0365150:intron 35.0%
TGTTGTAACAGTTAGGAACT+TGG - chr3_1:58912461-58912480 Msa0365150:intron 35.0%
! ACAGTTAGGAACTTGGATTT+TGG - chr3_1:58912468-58912487 Msa0365150:intron 35.0%
! TTGCCTTGTTGAAAAGTTTC+TGG + chr3_1:58912583-58912602 None:intergenic 35.0%
GGAGAAAAAATTGCCATTCT+TGG - chr3_1:58912620-58912639 Msa0365150:intron 35.0%
TGATTCTGCTCGAAATAGTT+AGG + chr3_1:58912743-58912762 None:intergenic 35.0%
TAACTATTTCGAGCAGAATC+AGG - chr3_1:58912742-58912761 Msa0365150:intron 35.0%
!! AAAATGCTATTTGGTGCCAT+CGG - chr3_1:58912783-58912802 Msa0365150:intron 35.0%
AAATGAAGAATTGGAACCGA+TGG + chr3_1:58912802-58912821 None:intergenic 35.0%
GACGATATTAAAGGACTTCT+TGG - chr3_1:58912934-58912953 Msa0365150:intron 35.0%
CGTAAAGTTTCTCTATTGAG+TGG - chr3_1:58912988-58913007 Msa0365150:intron 35.0%
AAAGTTTCTCTATTGAGTGG+TGG - chr3_1:58912991-58913010 Msa0365150:intron 35.0%
!!! TTTTGCTCTCCTTTGAAATG+TGG - chr3_1:58913249-58913268 Msa0365150:intron 35.0%
! ATGGCTATGATGATGTTAAG+AGG - chr3_1:58913340-58913359 Msa0365150:CDS 35.0%
TCCTGATAAAAAGGGAAATG+TGG - chr3_1:58913538-58913557 Msa0365150:intron 35.0%
! ACCACATTTCCCTTTTTATC+AGG + chr3_1:58913542-58913561 None:intergenic 35.0%
! ACCATCAACTCTACTTGTTT+TGG - chr3_1:58913957-58913976 Msa0365150:intron 35.0%
TCCAAAACAAGTAGAGTTGA+TGG + chr3_1:58913961-58913980 None:intergenic 35.0%
! ACCTTCTAAAGAAATGCTTG+AGG - chr3_1:58914005-58914024 Msa0365150:intron 35.0%
ACCTCAAGCATTTCTTTAGA+AGG + chr3_1:58914009-58914028 None:intergenic 35.0%
AAAACTCTGTATCCAATCCA+AGG - chr3_1:58914109-58914128 Msa0365150:intron 35.0%
! ATATTAGTCTGTCCTTGGAT+TGG + chr3_1:58914124-58914143 None:intergenic 35.0%
ATCATGAGATACGGTGATAA+CGG + chr3_1:58914194-58914213 None:intergenic 35.0%
TTATCACCGTATCTCATGAT+CGG - chr3_1:58914194-58914213 Msa0365150:intron 35.0%
!! AAAGTACCGATCATGAGATA+CGG + chr3_1:58914203-58914222 None:intergenic 35.0%
ATGGGACACAAAAAAGCTAA+TGG + chr3_1:58914326-58914345 None:intergenic 35.0%
GCGGATAGTTAAGAAAATTG+AGG + chr3_1:58914550-58914569 None:intergenic 35.0%
TCAGGTAGGGACTAATAATT+TGG + chr3_1:58914691-58914710 None:intergenic 35.0%
TAATGAAGTGAACAGTCTTG+TGG - chr3_1:58914846-58914865 Msa0365150:intron 35.0%
ACTTAGATTTGACACTTGAG+AGG - chr3_1:58915014-58915033 Msa0365150:intron 35.0%
CTTAGATTTGACACTTGAGA+GGG - chr3_1:58915015-58915034 Msa0365150:intron 35.0%
! TTGCTATTAAGCTCTCTTAG+TGG - chr3_1:58915094-58915113 Msa0365150:intron 35.0%
!! ATGTGTTCCATTTTTCGTCA+AGG - chr3_1:58915208-58915227 Msa0365150:CDS 35.0%
! TATGCGGTTACCTAATTTTG+AGG - chr3_1:58915234-58915253 Msa0365150:CDS 35.0%
! ATGCGGTTACCTAATTTTGA+GGG - chr3_1:58915235-58915254 Msa0365150:CDS 35.0%
TCACGAAGTTACTATCAACA+TGG + chr3_1:58915270-58915289 None:intergenic 35.0%
TACCTTTGACATCTTGGATT+TGG + chr3_1:58915553-58915572 None:intergenic 35.0%
GAAGTTTACCTTTGACATCT+TGG + chr3_1:58915559-58915578 None:intergenic 35.0%
AAACTTCTGTGAAACTCGTA+TGG - chr3_1:58915572-58915591 Msa0365150:CDS 35.0%
CAAGCAAAACAGAAGTCTAA+AGG - chr3_1:58915712-58915731 Msa0365150:CDS 35.0%
GTGCAAAGAATTCAAAGAGA+TGG - chr3_1:58915734-58915753 Msa0365150:CDS 35.0%
! TCATGTATGGTGTAATGGAA+TGG + chr3_1:58915771-58915790 None:intergenic 35.0%
TCTCTTCATGTATGGTGTAA+TGG + chr3_1:58915776-58915795 None:intergenic 35.0%
GATTTATTCACCAAATGAGG+GGG - chr3_1:58915805-58915824 Msa0365150:CDS 35.0%
TTACAGTCTCAACAACAACT+TGG - chr3_1:58915962-58915981 Msa0365150:CDS 35.0%
AAATAGCATTAAGACCACAG+CGG + chr3_1:58916052-58916071 None:intergenic 35.0%
GTTGCTTACTCGTATTTCAT+GGG + chr3_1:58916081-58916100 None:intergenic 35.0%
AGTTGCTTACTCGTATTTCA+TGG + chr3_1:58916082-58916101 None:intergenic 35.0%
AAGATGATCGGAAGATGTTG+TGG + chr3_1:58910280-58910299 None:intergenic 40.0%
CCGATCATCTTCAAACACAA+TGG - chr3_1:58910289-58910308 Msa0365150:three_prime_UTR 40.0%
AGAATCGAGAATGAATGCTC+CGG + chr3_1:58910348-58910367 None:intergenic 40.0%
!! AGTGTTAAAGGTGTTGGGTT+TGG + chr3_1:58910411-58910430 None:intergenic 40.0%
! GGGGTTAGTGTTAGTGTTAA+AGG + chr3_1:58910423-58910442 None:intergenic 40.0%
TTGAGGTGAAGAATCGATTG+GGG + chr3_1:58910442-58910461 None:intergenic 40.0%
! TCGTTCATCGACTGAAGTAT+CGG + chr3_1:58910552-58910571 None:intergenic 40.0%
!!! AGGTGTTACGGTTTTGAAAG+AGG - chr3_1:58910655-58910674 Msa0365150:intron 40.0%
AGTGAAAAAGGGTGAGAAAG+TGG - chr3_1:58910688-58910707 Msa0365150:intron 40.0%
GTGAAAAAGGGTGAGAAAGT+GGG - chr3_1:58910689-58910708 Msa0365150:intron 40.0%
! GTGGGTTTAGTTGGTGTAAA+TGG - chr3_1:58910707-58910726 Msa0365150:intron 40.0%
! TTAGTTGGTGTAAATGGTGC+GGG - chr3_1:58910713-58910732 Msa0365150:intron 40.0%
GACACAGATGAGGATTATTG+CGG - chr3_1:58910742-58910761 Msa0365150:intron 40.0%
ACACAGATGAGGATTATTGC+GGG - chr3_1:58910743-58910762 Msa0365150:intron 40.0%
TTAATCACATTCCCCGAATC+CGG + chr3_1:58910779-58910798 None:intergenic 40.0%
! AATTTGAGGTTTCGCAGAGT+AGG - chr3_1:58910837-58910856 Msa0365150:intron 40.0%
TAAAGAGGAAATGGAGGTTG+CGG - chr3_1:58910889-58910908 Msa0365150:intron 40.0%
! GAAATTGGAGAAAGTGCAGA+AGG - chr3_1:58910913-58910932 Msa0365150:intron 40.0%
TGAGGGCTCTGTTAATGATT+TGG - chr3_1:58910940-58910959 Msa0365150:intron 40.0%
AGTAAGTTAATGCCTGAGCT+TGG - chr3_1:58911049-58911068 Msa0365150:intron 40.0%
! TTAATGCCTGAGCTTGGTTT+TGG - chr3_1:58911055-58911074 Msa0365150:intron 40.0%
TTGGTGTAGAGGATTCTGAT+AGG - chr3_1:58911074-58911093 Msa0365150:intron 40.0%
TGTAGAGGATTCTGATAGGT+TGG - chr3_1:58911078-58911097 Msa0365150:intron 40.0%
!! AGGTTGGTTGCTTCTTTTAG+TGG - chr3_1:58911094-58911113 Msa0365150:intron 40.0%
! TTGGTTGCTTCTTTTAGTGG+TGG - chr3_1:58911097-58911116 Msa0365150:intron 40.0%
!! TTGCTTCTTTTAGTGGTGGA+TGG - chr3_1:58911101-58911120 Msa0365150:intron 40.0%
!! CTTCAATTGGAAGTGTCTAG+TGG - chr3_1:58911347-58911366 Msa0365150:intron 40.0%
TGGTGGTATTGCAAATTGCA+TGG - chr3_1:58911367-58911386 Msa0365150:intron 40.0%
! ATCAATAAAGGGCACACCTT+AGG - chr3_1:58911510-58911529 Msa0365150:intron 40.0%
TTAAGCATAGATGCAGCCTA+AGG + chr3_1:58911529-58911548 None:intergenic 40.0%
CTGCATCTATGCTTAACCAT+AGG - chr3_1:58911533-58911552 Msa0365150:intron 40.0%
TTGAAACACAGTATGCTGCA+TGG - chr3_1:58911905-58911924 Msa0365150:intron 40.0%
TGAAACACAGTATGCTGCAT+GGG - chr3_1:58911906-58911925 Msa0365150:intron 40.0%
!! AGAGAGTTGATAAGCAGGTT+AGG - chr3_1:58911958-58911977 Msa0365150:intron 40.0%
! AACTGCTGAGAAGGTATATG+TGG - chr3_1:58912008-58912027 Msa0365150:intron 40.0%
! CAACACTACTACCGCATTTT+TGG + chr3_1:58912225-58912244 None:intergenic 40.0%
ATTGGAAAGACTTCTTGGAG+AGG - chr3_1:58912365-58912384 Msa0365150:CDS 40.0%
!!! GAACTTGGATTTTGGCTTTG+AGG - chr3_1:58912476-58912495 Msa0365150:intron 40.0%
! GTGCCAGAAACTTTTCAACA+AGG - chr3_1:58912577-58912596 Msa0365150:intron 40.0%
ATTGCCATTCTTGGTCCAAA+TGG - chr3_1:58912629-58912648 Msa0365150:intron 40.0%
ACATCCATTTGGACCAAGAA+TGG + chr3_1:58912636-58912655 None:intergenic 40.0%
ATTCTTGGTCCAAATGGATG+TGG - chr3_1:58912635-58912654 Msa0365150:intron 40.0%
GTAATACATTATGCTCCCCA+AGG + chr3_1:58912721-58912740 None:intergenic 40.0%
!! GCTGACTTGATTTAGTCAAC+AGG - chr3_1:58912843-58912862 Msa0365150:intron 40.0%
TTGATTTAGTCAACAGGCTG+AGG - chr3_1:58912849-58912868 Msa0365150:intron 40.0%
TGGAGGAGTGACGATATTAA+AGG - chr3_1:58912925-58912944 Msa0365150:intron 40.0%
ATCAACCATCTCAATGTTCG+AGG + chr3_1:58913376-58913395 None:intergenic 40.0%
ATCCATACACCTGCATTCTT+TGG - chr3_1:58913443-58913462 Msa0365150:intron 40.0%
TCCATACACCTGCATTCTTT+GGG - chr3_1:58913444-58913463 Msa0365150:intron 40.0%
ATGAAATGCCCAAAGAATGC+AGG + chr3_1:58913455-58913474 None:intergenic 40.0%
!! AAGGGAAATGTGGTGCTATT+AGG - chr3_1:58913548-58913567 Msa0365150:intron 40.0%
AGAGATGAGAGGTAAAACAG+AGG + chr3_1:58913627-58913646 None:intergenic 40.0%
! GTTCCATGTTTTACTAGGCA+CGG - chr3_1:58913908-58913927 Msa0365150:CDS 40.0%
!!! GCTGGCTTTTTGCAAATTCA+TGG - chr3_1:58913930-58913949 Msa0365150:CDS 40.0%
GGTATATCCAAGTGATTCGT+TGG + chr3_1:58913988-58914007 None:intergenic 40.0%
ACACAAAAAAGCTAATGGCG+GGG + chr3_1:58914321-58914340 None:intergenic 40.0%
GACACAAAAAAGCTAATGGC+GGG + chr3_1:58914322-58914341 None:intergenic 40.0%
GGACACAAAAAAGCTAATGG+CGG + chr3_1:58914323-58914342 None:intergenic 40.0%
GATTCAGAGATAGTTGAAGC+AGG - chr3_1:58914374-58914393 Msa0365150:CDS 40.0%
GATAGTTGAAGCAGGTTAAC+TGG - chr3_1:58914382-58914401 Msa0365150:CDS 40.0%
ATGAACAAGATCGCCAAGAA+GGG + chr3_1:58914579-58914598 None:intergenic 40.0%
! TAGTCCTTTTGATCCTTCAC+AGG + chr3_1:58914964-58914983 None:intergenic 40.0%
GAGAGCTTAATAGCAACAGT+TGG + chr3_1:58915090-58915109 None:intergenic 40.0%
TATTAAGCTCTCTTAGTGGC+AGG - chr3_1:58915098-58915117 Msa0365150:intron 40.0%
GTTCATAATCTAAGTTGCGC+TGG - chr3_1:58915183-58915202 Msa0365150:CDS 40.0%
CATACAGCCTTGACGAAAAA+TGG + chr3_1:58915218-58915237 None:intergenic 40.0%
! TTTTTCGTCAAGGCTGTATG+CGG - chr3_1:58915218-58915237 Msa0365150:CDS 40.0%
! AGACATATGGTGATGCTGTA+AGG - chr3_1:58915327-58915346 Msa0365150:CDS 40.0%
! GACATATGGTGATGCTGTAA+GGG - chr3_1:58915328-58915347 Msa0365150:CDS 40.0%
AGCCAAATCCAAGATGTCAA+AGG - chr3_1:58915548-58915567 Msa0365150:CDS 40.0%
AAGGAAGAAGCAAAAGATGC+AGG - chr3_1:58915681-58915700 Msa0365150:CDS 40.0%
!! CTTCTGTTTTGCTTGCTGAA+AGG + chr3_1:58915707-58915726 None:intergenic 40.0%
TTGAGACTGTAAACTTCACC+AGG + chr3_1:58915954-58915973 None:intergenic 40.0%
CTGCGGCTCCTGAAATTTAT+TGG + chr3_1:58910162-58910181 None:intergenic 45.0%
AAGTGTGAGGCAGAGAAAGA+AGG + chr3_1:58910228-58910247 None:intergenic 45.0%
!! TTTTACCCGGAAGAAGTGTG+AGG + chr3_1:58910241-58910260 None:intergenic 45.0%
ATGATCGGAAGATGTTGTGG+CGG + chr3_1:58910277-58910296 None:intergenic 45.0%
GATGAGATGAGTGTGGGATA+GGG + chr3_1:58910387-58910406 None:intergenic 45.0%
TTTGGCGATGAGATGAGTGT+GGG + chr3_1:58910393-58910412 None:intergenic 45.0%
! TGGCGGATAAACGTGAAGTA+TGG + chr3_1:58910475-58910494 None:intergenic 45.0%
AACTGAAGTTTCATCCACGG+CGG + chr3_1:58910501-58910520 None:intergenic 45.0%
! GGTGAGAAAGTGGGTTTAGT+TGG - chr3_1:58910698-58910717 Msa0365150:intron 45.0%
! TAGTTGGTGTAAATGGTGCG+GGG - chr3_1:58910714-58910733 Msa0365150:intron 45.0%
GATGAGGATTATTGCGGGTT+TGG - chr3_1:58910748-58910767 Msa0365150:CDS 45.0%
AAAGAGGAAATGGAGGTTGC+GGG - chr3_1:58910890-58910909 Msa0365150:intron 45.0%
!! ATGATTTGGAGTTGATGGGG+AGG - chr3_1:58910954-58910973 Msa0365150:intron 45.0%
TCTACACCAAAACCAAGCTC+AGG + chr3_1:58911064-58911083 None:intergenic 45.0%
!!! TGAGCTTGGTTTTGGTGTAG+AGG - chr3_1:58911063-58911082 Msa0365150:intron 45.0%
CAACATGTCAGTGTCGTGAT+CGG + chr3_1:58911236-58911255 None:intergenic 45.0%
! TGTCAGTGTCGAGTCTGTAT+TGG - chr3_1:58911311-58911330 Msa0365150:intron 45.0%
GTCGAGTCTGTATTGGAGAT+TGG - chr3_1:58911318-58911337 Msa0365150:intron 45.0%
!! CAATTGGAAGTGTCTAGTGG+TGG - chr3_1:58911350-58911369 Msa0365150:intron 45.0%
AAACTGACATGGGTGTATCC+AGG - chr3_1:58911833-58911852 Msa0365150:intron 45.0%
GGTGTATCCAGGACATTTGA+GGG - chr3_1:58911844-58911863 Msa0365150:intron 45.0%
TTGATAAGCAGGTTAGGTGC+CGG - chr3_1:58911964-58911983 Msa0365150:intron 45.0%
GTACTCTTGCCACATCCATT+TGG + chr3_1:58912647-58912666 None:intergenic 45.0%
GGTTTAGAGAAGCCAATCAG+CGG - chr3_1:58912686-58912705 Msa0365150:intron 45.0%
AGGATAACTTCACCGCTGAT+TGG + chr3_1:58912701-58912720 None:intergenic 45.0%
ATCAGCGGTGAAGTTATCCT+TGG - chr3_1:58912701-58912720 Msa0365150:intron 45.0%
TCAGCGGTGAAGTTATCCTT+GGG - chr3_1:58912702-58912721 Msa0365150:intron 45.0%
GGCACTTGATCTGGAAAAGA+CGG - chr3_1:58912870-58912889 Msa0365150:intron 45.0%
! TCTATTGAGTGGTGGTGAGA+AGG - chr3_1:58912999-58913018 Msa0365150:intron 45.0%
GCGGGTAAAGAAGCAATTCT+CGG + chr3_1:58913181-58913200 None:intergenic 45.0%
TCCAACCTCGAACATTGAGA+TGG - chr3_1:58913368-58913387 Msa0365150:CDS 45.0%
ACCATCTCAATGTTCGAGGT+TGG + chr3_1:58913372-58913391 None:intergenic 45.0%
! GTGCTATTAGGTTCTCACCA+TGG - chr3_1:58913560-58913579 Msa0365150:CDS 45.0%
TATTAGGTTCTCACCATGGC+AGG - chr3_1:58913564-58913583 Msa0365150:CDS 45.0%
ATTAGGTTCTCACCATGGCA+GGG - chr3_1:58913565-58913584 Msa0365150:CDS 45.0%
CATGCTTCCATGGTACTCTT+CGG - chr3_1:58913797-58913816 Msa0365150:intron 45.0%
!! GTTGTATCCGAAGAGTACCA+TGG + chr3_1:58913807-58913826 None:intergenic 45.0%
GGATGAACCAACGAATCACT+TGG - chr3_1:58913978-58913997 Msa0365150:intron 45.0%
GAGGCAATAAACGAGTACGA+GGG - chr3_1:58914166-58914185 Msa0365150:intron 45.0%
AGTTAAAGATGGCACTGTGC+AGG - chr3_1:58914252-58914271 Msa0365150:intron 45.0%
! AAAAAAGCTAATGGCGGGGA+GGG + chr3_1:58914317-58914336 None:intergenic 45.0%
TGAACAAGATCGCCAAGAAG+GGG + chr3_1:58914578-58914597 None:intergenic 45.0%
GATGAACAAGATCGCCAAGA+AGG + chr3_1:58914580-58914599 None:intergenic 45.0%
GATAGCAAATACGCCTGTGA+AGG - chr3_1:58914948-58914967 Msa0365150:CDS 45.0%
TACGCCTGTGAAGGATCAAA+AGG - chr3_1:58914957-58914976 Msa0365150:CDS 45.0%
TCTCTTAGTGGCAGGATTCA+GGG - chr3_1:58915106-58915125 Msa0365150:intron 45.0%
TGGAGAAGAATCTTGATGCC+AGG - chr3_1:58915472-58915491 Msa0365150:CDS 45.0%
GGAGAAGAATCTTGATGCCA+GGG - chr3_1:58915473-58915492 Msa0365150:CDS 45.0%
CTGTGAAACTCGTATGGATG+AGG - chr3_1:58915578-58915597 Msa0365150:CDS 45.0%
ATCAGGCTGAGAAAGAAGCA+AGG - chr3_1:58915662-58915681 Msa0365150:CDS 45.0%
AAACACATTAGCATCCGCTG+TGG - chr3_1:58916035-58916054 Msa0365150:five_prime_UTR 45.0%
ATACGAGTAAGCAACTGACG+TGG - chr3_1:58916086-58916105 Msa0365150:five_prime_UTR 45.0%
TATGTCTGGCACAAAACGAC+TGG + chr3_1:58916117-58916136 None:intergenic 45.0%
!!! TTTTTTTTTTACTAAAATTA+AGG - chr3_1:58915062-58915081 Msa0365150:intron 5.0%
!!! TTTTTTTTTACTAAAATTAA+GGG - chr3_1:58915063-58915082 Msa0365150:intron 5.0%
TCTCTGCCTCACACTTCTTC+CGG - chr3_1:58910232-58910251 Msa0365150:three_prime_UTR 50.0%
GGAAGATGTTGTGGCGGTTA+TGG + chr3_1:58910271-58910290 None:intergenic 50.0%
CGATGAGATGAGTGTGGGAT+AGG + chr3_1:58910388-58910407 None:intergenic 50.0%
GTTTGGCGATGAGATGAGTG+TGG + chr3_1:58910394-58910413 None:intergenic 50.0%
AGATGAAACGCTTGAAGCGC+CGG + chr3_1:58910600-58910619 None:intergenic 50.0%
GAGGATTATTGCGGGTTTGG+AGG - chr3_1:58910751-58910770 Msa0365150:CDS 50.0%
TATTGCGGGTTTGGAGGAAC+CGG - chr3_1:58910757-58910776 Msa0365150:CDS 50.0%
TGAGGTTTCGCAGAGTAGGA+CGG - chr3_1:58910841-58910860 Msa0365150:intron 50.0%
AAGAGGAAATGGAGGTTGCG+GGG - chr3_1:58910891-58910910 Msa0365150:intron 50.0%
AATGGAGGTTGCGGGGAAAT+TGG - chr3_1:58910898-58910917 Msa0365150:intron 50.0%
!! AAAGTGCAGAAGGCGCTTGA+GGG - chr3_1:58910923-58910942 Msa0365150:intron 50.0%
TTTGCTTCAGAGACGAGCTC+AGG - chr3_1:58910994-58911013 Msa0365150:intron 50.0%
ACGAGCTCAGGCTGTGAATT+TGG - chr3_1:58911006-58911025 Msa0365150:intron 50.0%
!! TTAGTGGTGGATGGCAGATG+AGG - chr3_1:58911110-58911129 Msa0365150:intron 50.0%
TGGCAGATGAGGATGTGTCT+TGG - chr3_1:58911121-58911140 Msa0365150:intron 50.0%
TAACAAGCAGGATGTGCCGA+TGG - chr3_1:58911756-58911775 Msa0365150:intron 50.0%
GGGTGTATCCAGGACATTTG+AGG - chr3_1:58911843-58911862 Msa0365150:intron 50.0%
CCTTCTCAGCAGTTGAAGCA+CGG + chr3_1:58912002-58912021 None:intergenic 50.0%
AAAATCAGGTTCCCTGTGCG+TGG - chr3_1:58912423-58912442 Msa0365150:intron 50.0%
CAGCGGTGAAGTTATCCTTG+GGG - chr3_1:58912703-58912722 Msa0365150:intron 50.0%
GCCCAAAGAATGCAGGTGTA+TGG + chr3_1:58913448-58913467 None:intergenic 50.0%
TTCTCACCATGGCAGGGTTT+GGG - chr3_1:58913571-58913590 Msa0365150:CDS 50.0%
GAGAGAGAGAGAGAGATGAG+AGG + chr3_1:58913638-58913657 None:intergenic 50.0%
CAGCCGTGCCTAGTAAAACA+TGG + chr3_1:58913914-58913933 None:intergenic 50.0%
! CATGTTTTACTAGGCACGGC+TGG - chr3_1:58913912-58913931 Msa0365150:CDS 50.0%
CGTACTCGTTTATTGCCTCC+TGG + chr3_1:58914165-58914184 None:intergenic 50.0%
GGAGGCAATAAACGAGTACG+AGG - chr3_1:58914165-58914184 Msa0365150:intron 50.0%
! AAAAAGCTAATGGCGGGGAG+GGG + chr3_1:58914316-58914335 None:intergenic 50.0%
! CAAAAAAGCTAATGGCGGGG+AGG + chr3_1:58914318-58914337 None:intergenic 50.0%
GAACAAGATCGCCAAGAAGG+GGG + chr3_1:58914577-58914596 None:intergenic 50.0%
CTCTCTTAGTGGCAGGATTC+AGG - chr3_1:58915105-58915124 Msa0365150:intron 50.0%
TTAGTGGCAGGATTCAGGGA+AGG - chr3_1:58915110-58915129 Msa0365150:intron 50.0%
TAGTGGCAGGATTCAGGGAA+GGG - chr3_1:58915111-58915130 Msa0365150:intron 50.0%
! GCGTTCAAGCTCTTTTTCCC+TGG + chr3_1:58915493-58915512 None:intergenic 50.0%
GGAAAAAGAGCTTGAACGCC+AGG - chr3_1:58915494-58915513 Msa0365150:CDS 50.0%
CACCAAATGAGGGGGATAGA+AGG - chr3_1:58915813-58915832 Msa0365150:CDS 50.0%
CACCTTCTATCCCCCTCATT+TGG + chr3_1:58915818-58915837 None:intergenic 50.0%
CTCTGCCTCACACTTCTTCC+GGG - chr3_1:58910233-58910252 Msa0365150:three_prime_UTR 55.0%
CGAGAATGAATGCTCCGGTG+AGG + chr3_1:58910343-58910362 None:intergenic 55.0%
GGCGCTTCAAGCGTTTCATC+TGG - chr3_1:58910599-58910618 Msa0365150:CDS 55.0%
GGGTTTGGAGGAACCGGATT+CGG - chr3_1:58910763-58910782 Msa0365150:CDS 55.0%
GGTTTGGAGGAACCGGATTC+GGG - chr3_1:58910764-58910783 Msa0365150:CDS 55.0%
GTTTGGAGGAACCGGATTCG+GGG - chr3_1:58910765-58910784 Msa0365150:CDS 55.0%
TTTCGCAGAGTAGGACGGTG+AGG - chr3_1:58910846-58910865 Msa0365150:intron 55.0%
TTCGCAGAGTAGGACGGTGA+GGG - chr3_1:58910847-58910866 Msa0365150:intron 55.0%
!! GAAAGTGCAGAAGGCGCTTG+AGG - chr3_1:58910922-58910941 Msa0365150:intron 55.0%
!!! GGAGTTGATGGGGAGGCTTT+TGG - chr3_1:58910961-58910980 Msa0365150:intron 55.0%
!! TTAGGTGCCGGAGCAAGTTC+TGG - chr3_1:58911976-58911995 Msa0365150:intron 55.0%
CCGTGCTTCAACTGCTGAGA+AGG - chr3_1:58911999-58912018 Msa0365150:intron 55.0%
TTCCACTGCTTCCACGCACA+GGG + chr3_1:58912437-58912456 None:intergenic 55.0%
! ACAGGCTGAGGCACTTGATC+TGG - chr3_1:58912861-58912880 Msa0365150:intron 55.0%
GACGGTGCTTGAGACAGTAG+AGG - chr3_1:58912888-58912907 Msa0365150:intron 55.0%
GACAGTAGAGGAAGCTGCAG+AGG - chr3_1:58912900-58912919 Msa0365150:intron 55.0%
TAGAGGAAGCTGCAGAGGAC+TGG - chr3_1:58912905-58912924 Msa0365150:intron 55.0%
GTTCTCACCATGGCAGGGTT+TGG - chr3_1:58913570-58913589 Msa0365150:CDS 55.0%
TCTCACCATGGCAGGGTTTG+GGG - chr3_1:58913572-58913591 Msa0365150:CDS 55.0%
GGCACTGTGCAGGATTATGC+TGG - chr3_1:58914262-58914281 Msa0365150:intron 55.0%
! AAAAGCTAATGGCGGGGAGG+GGG + chr3_1:58914315-58914334 None:intergenic 55.0%
TATCCGCTTTGCCCCCTTCT+TGG - chr3_1:58914563-58914582 Msa0365150:CDS 55.0%
CTTTGTCGTCAAGCTCAGCC+TGG + chr3_1:58915515-58915534 None:intergenic 55.0%
TGAATGCTCCGGTGAGGTCG+AGG + chr3_1:58910337-58910356 None:intergenic 60.0%
TGTGGGATAGGGTGCGTGGA+AGG + chr3_1:58910376-58910395 None:intergenic 60.0%
TGAGTGTGGGATAGGGTGCG+TGG + chr3_1:58910380-58910399 None:intergenic 60.0%
AGTTTCATCCACGGCGGCGA+TGG + chr3_1:58910495-58910514 None:intergenic 60.0%
CGGGGAAGACGACACAGATG+AGG - chr3_1:58910732-58910751 Msa0365150:intron 60.0%
! AGCACGGCCAGAACTTGCTC+CGG + chr3_1:58911986-58912005 None:intergenic 60.0%
TTCCCTGTGCGTGGAAGCAG+TGG - chr3_1:58912432-58912451 Msa0365150:intron 60.0%
CTTCCACTGCTTCCACGCAC+AGG + chr3_1:58912438-58912457 None:intergenic 60.0%
AGGAAGCTGCAGAGGACTGG+AGG - chr3_1:58912908-58912927 Msa0365150:intron 60.0%
ACCATGGCAGGGTTTGGGGA+AGG - chr3_1:58913576-58913595 Msa0365150:CDS 60.0%
CCATGGCAGGGTTTGGGGAA+GGG - chr3_1:58913577-58913596 Msa0365150:CDS 60.0%
! AAAGCTAATGGCGGGGAGGG+GGG + chr3_1:58914314-58914333 None:intergenic 60.0%
TCGCCAAGAAGGGGGCAAAG+CGG + chr3_1:58914569-58914588 None:intergenic 60.0%
TGGCAGGATTCAGGGAAGGG+TGG - chr3_1:58915114-58915133 Msa0365150:intron 60.0%
GGCAGGATTCAGGGAAGGGT+GGG - chr3_1:58915115-58915134 Msa0365150:intron 60.0%
CTCCACCACCTCGACCTCAC+CGG - chr3_1:58910326-58910345 Msa0365150:three_prime_UTR 65.0%
ATGCTCCGGTGAGGTCGAGG+TGG + chr3_1:58910334-58910353 None:intergenic 65.0%
TTTATCCGCCATCGCCGCCG+TGG - chr3_1:58910484-58910503 Msa0365150:three_prime_UTR 65.0%
TTCATCCACGGCGGCGATGG+CGG + chr3_1:58910492-58910511 None:intergenic 65.0%
CCCTTCCCCAAACCCTGCCA+TGG + chr3_1:58913580-58913599 None:intergenic 65.0%
! AAGCTAATGGCGGGGAGGGG+GGG + chr3_1:58914313-58914332 None:intergenic 65.0%
CTCCGGTGAGGTCGAGGTGG+TGG + chr3_1:58910331-58910350 None:intergenic 70.0%
! AGCTAATGGCGGGGAGGGGG+GGG + chr3_1:58914312-58914331 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 58910159 58916157 58910159 ID=Msa0365150;Name=Msa0365150
chr3_1 mRNA 58910159 58916157 58910159 ID=Msa0365150-mRNA-1;Parent=Msa0365150;Name=Msa0365150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=149|0.77|0.9|0.9|1|1|10|395|724
chr3_1 exon 58910159 58910649 58910159 ID=Msa0365150-mRNA-1:exon:11234;Parent=Msa0365150-mRNA-1
chr3_1 exon 58910747 58910851 58910747 ID=Msa0365150-mRNA-1:exon:11233;Parent=Msa0365150-mRNA-1
chr3_1 exon 58912022 58912150 58912022 ID=Msa0365150-mRNA-1:exon:11232;Parent=Msa0365150-mRNA-1
chr3_1 exon 58912290 58912391 58912290 ID=Msa0365150-mRNA-1:exon:11231;Parent=Msa0365150-mRNA-1
chr3_1 exon 58913296 58913451 58913296 ID=Msa0365150-mRNA-1:exon:11230;Parent=Msa0365150-mRNA-1
chr3_1 exon 58913553 58913732 58913553 ID=Msa0365150-mRNA-1:exon:11229;Parent=Msa0365150-mRNA-1
chr3_1 exon 58913813 58913953 58913813 ID=Msa0365150-mRNA-1:exon:11228;Parent=Msa0365150-mRNA-1
chr3_1 exon 58914296 58914637 58914296 ID=Msa0365150-mRNA-1:exon:11227;Parent=Msa0365150-mRNA-1
chr3_1 exon 58914928 58914999 58914928 ID=Msa0365150-mRNA-1:exon:11226;Parent=Msa0365150-mRNA-1
chr3_1 exon 58915157 58916157 58915157 ID=Msa0365150-mRNA-1:exon:11225;Parent=Msa0365150-mRNA-1
chr3_1 five_prime_UTR 58916009 58916157 58916009 ID=Msa0365150-mRNA-1:five_prime_utr;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58915157 58916008 58915157 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58914928 58914999 58914928 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58914296 58914637 58914296 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58913813 58913953 58913813 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58913553 58913732 58913553 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58913296 58913451 58913296 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58912290 58912391 58912290 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58912022 58912150 58912022 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58910747 58910851 58910747 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 CDS 58910554 58910649 58910554 ID=Msa0365150-mRNA-1:cds;Parent=Msa0365150-mRNA-1
chr3_1 three_prime_UTR 58910159 58910553 58910159 ID=Msa0365150-mRNA-1:three_prime_utr;Parent=Msa0365150-mRNA-1
Gene Sequence

>Msa0365150

ATGGAATTAGCTTCAAAGCTCCACCACCTCGACCTCACCGGAGCATTCATTCTCGATTCTCGACGCCTTCCACGCACCCTATCCCACACTCATCTCATCGCCAAACCCAACACCTTTAACACTAACACTAACCCCAATCGATTCTTCACCTCAAAAAAACTCAACCATACTTCACGTTTATCCGCCATCGCCGCCGTGGATGAAACTTCAGTTGAAGAAGATGATATTGAGTCACTATTTACCGATACTTCAGTCGATGAACGACGCAGTAACAATAAACAATCTAACACCGGCGCTTCAAGCGTTTCATCTGGTGTGAAGTTAGAAAATATTAGAAAAACTTACAAAGGTGTTACGGTTTTGAAAGAGGTTAATTGGGAAGTGAAAAAGGGTGAGAAAGTGGGTTTAGTTGGTGTAAATGGTGCGGGGAAGACGACACAGATGAGGATTATTGCGGGTTTGGAGGAACCGGATTCGGGGAATGTGATTAAAGCGAAACCAAATATGAAAATTGCGTTTTTGAGTCAGGAATTTGAGGTTTCGCAGAGTAGGACGGTGAGGGAAGAATTTATGAGTGCTTTTAAAGAGGAAATGGAGGTTGCGGGGAAATTGGAGAAAGTGCAGAAGGCGCTTGAGGGCTCTGTTAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAGACGAGCTCAGGCTGTGAATTTGGATGTCGTTGATTCGAAGATAAGTAAGTTAATGCCTGAGCTTGGTTTTGGTGTAGAGGATTCTGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTTTACTTCAGTGTCGAGTCTGTATTGGAGATTGGACATGTCTTCAATTGGAAGTGTCTAGTGGTGGTATTGCAAATTGCATGGAACCAGATTTGTTGTTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACAATTGAGTGGCTTGAAGATTATCTTAACAAGCAGGATGTGCCGATGGTTATCATTTCTCACGACAGAGCTTTTCTCGATCAACTATGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATATTCTTTCAAAGGCGACTTGGATTGAAACACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAAACAAGAGAGTTGATAAGCAGGTTAGGTGCCGGAGCAAGTTCTGGCCGTGCTTCAACTGCTGAGAAGAAATTGGAAAGACTTCTTGGAGAGGAACTAGTAGAAAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGCTTTGAGGATAAAAAACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTCTTGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAATCAGCGGTGAAGTTATCCTTGGGGAGCATAATGTATTACCTAACTATTTCGAGCAGAATCAGGCTGAGGCACTTGATCTGGAAAAGACGGTGCTTGAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTACTTGTTTTGGATGAACCAACGAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAACGAGTACGAGGGCACCGTTATCACCGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTTAAAGATGGCACTGTGCAGGATTATGCTGGAGATTACAATTATTATTTGGAGAAGAATCTTGATGCCAGGGAAAAAGAGCTTGAACGCCAGGCTGAGCTTGACGACAAAGCTCCTAAATTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGCAAGCAAAACAGAAGTCTAAAGGTGCAAAGAATTCAAAGAGATGGAATTAA
Protein sequence

>Msa0365150

MELASKLHHLDLTGAFILDSRRLPRTLSHTHLIAKPNTFNTNTNPNRFFTSKKLNHTSRLSAIAAVDETSVEEDDIESLFTDTSVDERRSNNKQSNTGASSVSSGVKLENIRKTYKGVTVLKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQEFEVSQSRTVREEFMSAFKEEMEVAGKLEKVQKALEGSVNDLELMGRLLDEFDLLQRRAQAVNLDVVDSKISKLMPELGFGVEDSDRLVASFSGGWQMRMCLGKILLQCRVCIGDWTCLQLEVSSGGIANCMEPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEQTRELISRLGAGASSGRASTAEKKLERLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKKLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPISGEVILGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLEKNLDAREKELERQAELDDKAPKLKAKSKMSKAEKEARKKQKMQAFQQAKQKSKGAKNSKRWN*