AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0263620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263620 MtrunA17_Chr2g0326841 99.043 209 2 0 1 209 1 209 7.83e-156 429
Msa0263620 MtrunA17_Chr7g0264181 87.317 205 26 0 3 207 4 208 1.62e-133 373
Msa0263620 MtrunA17_Chr1g0181131 85.990 207 29 0 1 207 1 207 2.34e-133 373
Msa0263620 MtrunA17_Chr4g0028871 89.899 198 20 0 12 209 12 209 1.00e-132 371
Msa0263620 MtrunA17_Chr3g0142491 76.329 207 49 0 1 207 3 209 1.25e-119 338
Msa0263620 MtrunA17_Chr1g0177391 76.410 195 46 0 10 204 6 200 3.25e-114 324
Msa0263620 MtrunA17_Chr1g0151201 69.000 200 60 1 11 208 7 206 4.14e-102 294
Msa0263620 MtrunA17_Chr1g0156401 66.964 112 16 1 40 130 1 112 7.38e-45 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263620 AT2G28305.1 88.945 199 22 0 10 208 5 203 1.37e-132 371
Msa0263620 AT2G37210.1 85.644 202 29 0 7 208 8 209 1.59e-130 366
Msa0263620 AT3G53450.1 84.236 203 32 0 7 209 8 210 1.59e-127 358
Msa0263620 AT2G37210.2 76.106 226 30 1 7 208 8 233 1.39e-124 352
Msa0263620 AT2G28305.3 90.659 182 17 0 10 191 5 186 6.26e-122 343
Msa0263620 AT5G06300.1 79.000 200 42 0 5 204 1 200 7.27e-118 334
Msa0263620 AT5G03270.1 82.796 186 32 0 10 195 16 201 2.70e-113 322
Msa0263620 AT2G35990.1 71.144 201 58 0 5 205 1 201 1.46e-110 315
Msa0263620 AT5G03270.2 82.873 181 31 0 10 190 16 196 4.77e-109 311
Msa0263620 AT4G35190.1 69.458 203 62 0 5 207 1 203 2.47e-105 303
Msa0263620 AT5G11950.1 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0263620 AT5G11950.2 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0263620 AT5G11950.3 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0263620 AT4G35190.2 70.103 194 56 1 5 198 1 192 1.16e-100 290
Msa0263620 AT2G28305.2 92.593 135 10 0 10 144 5 139 6.22e-89 258
Msa0263620 AT2G35990.3 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0263620 AT2G35990.2 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0263620 AT5G11950.4 68.421 152 48 0 57 208 1 152 3.92e-74 221
Msa0263620 AT5G26140.2 53.061 147 47 1 84 208 6 152 2.46e-45 148
Msa0263620 AT5G26140.1 51.880 133 42 1 98 208 1 133 6.09e-38 129
Msa0263620 AT5G26140.3 56.863 102 44 0 107 208 17 118 2.06e-34 119

Find 67 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATTGATCTAGTTTA+TGG 0.105402 2_2:-63165005 Msa0263620:CDS
CTCTCTTGGCATTAGTGTTT+TGG 0.116726 2_2:+63164723 None:intergenic
TGTTTCTACTTTAATTACTA+TGG 0.284874 2_2:+63165594 None:intergenic
GATGGTGGTCGACATGTAAT+TGG 0.286287 2_2:-63164936 Msa0263620:CDS
AATGATGCTGACTCGTCTAT+AGG 0.325760 2_2:+63165517 None:intergenic
GTTAATGTAAACTATCGATT+TGG 0.336123 2_2:-63159818 Msa0263620:three_prime_UTR
CCAACCTGGTAAGGCTATAA+AGG 0.339119 2_2:+63163598 None:intergenic
ATGATGCTGACTCGTCTATA+GGG 0.353587 2_2:+63165518 None:intergenic
TGTACTATGCTGCAGCTTAC+TGG 0.369947 2_2:-63163695 Msa0263620:intron
TATTGAACTTGGAAAAGAAT+TGG 0.373481 2_2:-63165281 Msa0263620:intron
AGGAGGCAGCATTGGTTTGA+TGG 0.380464 2_2:-63164982 Msa0263620:CDS
TGGTAACAAAACTAGCTATA+AGG 0.381980 2_2:-63165311 Msa0263620:CDS
CGGTTATATGGTATATATAA+AGG 0.383302 2_2:+63165450 None:intergenic
CTGCATAACTTTACCTCTCT+TGG 0.385694 2_2:+63164709 None:intergenic
GTGGTATAAGCGCGGTTATA+TGG 0.390897 2_2:+63165438 None:intergenic
GGAGGCAGCATTGGTTTGAT+GGG 0.391809 2_2:-63164981 Msa0263620:CDS
GCATCAAAGGAAAGCTGAAA+TGG 0.434148 2_2:-63163636 Msa0263620:CDS
TATTTGCATGAAGGTGGGTA+TGG 0.435005 2_2:-63160665 Msa0263620:intron
GAGTTGCCTCCAAGCTAAGC+TGG 0.437628 2_2:-63160028 Msa0263620:CDS
TTTGTCGATGAAAGTCAAAA+AGG 0.444110 2_2:+63160442 None:intergenic
AAATCTTTACCGGTTTATCA+TGG 0.448590 2_2:+63160594 None:intergenic
GTGGGATTGCTGAATGTTGA+TGG 0.455471 2_2:-63160476 Msa0263620:CDS
CCTTTGATATGAGTGGTTGA+TGG 0.456369 2_2:+63165414 None:intergenic
AAGGATGCTGCTATTGAACT+TGG 0.459571 2_2:-63165292 Msa0263620:CDS
TCTCTCACCTTTGATATGAG+TGG 0.472849 2_2:+63165407 None:intergenic
GGTAGAAGATCACAATTTCA+TGG 0.474201 2_2:-63159874 Msa0263620:three_prime_UTR
TTTGAATGAATGGTGAAAGA+GGG 0.481457 2_2:-63165619 None:intergenic
TTGGTGCAGACACAATTATA+TGG 0.490804 2_2:+63160384 None:intergenic
TTGTTTGTACCAACCTGGTA+AGG 0.495823 2_2:+63163589 None:intergenic
GTTTATGGAGGAGGCAGCAT+TGG 0.498113 2_2:-63164990 Msa0263620:CDS
CACAATTATATGGCGAGCTG+TGG 0.500721 2_2:+63160394 None:intergenic
ACTTGGCATCCATGATAAAC+CGG 0.501203 2_2:-63160603 Msa0263620:intron
ATTTCCCAAGCTGTTTATGA+TGG 0.505165 2_2:-63164954 Msa0263620:CDS
GATGCCTTTATAGCCTTACC+AGG 0.517415 2_2:-63163602 Msa0263620:intron
ACAATTATATGGCGAGCTGT+GGG 0.517777 2_2:+63160395 None:intergenic
TCCCAAGCTGTTTATGATGG+TGG 0.519492 2_2:-63164951 Msa0263620:CDS
ACCACCATCATAAACAGCTT+GGG 0.519561 2_2:+63164950 None:intergenic
ATTGATCTAGTTTATGGAGG+AGG 0.523752 2_2:-63164999 Msa0263620:CDS
GACAACTCAAGGAACTACTA+TGG 0.525382 2_2:-63159895 Msa0263620:three_prime_UTR
AGGCAACTCTTTCATGCTGT+GGG 0.528340 2_2:+63160042 None:intergenic
TCAAAGGTGAGAGAGAAGAA+TGG 0.531372 2_2:-63165398 Msa0263620:exon
GTGATAACATGGGCTCAACT+TGG 0.532726 2_2:-63160620 Msa0263620:CDS
CAGTAGCTGACATGCATCAA+AGG 0.536960 2_2:-63163649 Msa0263620:CDS
GACCACCATCATAAACAGCT+TGG 0.537227 2_2:+63164949 None:intergenic
GAGGCAGCATTGGTTTGATG+GGG 0.537940 2_2:-63164980 Msa0263620:CDS
ATCGACAAAGCTGTGGAGGA+AGG 0.545903 2_2:-63160428 Msa0263620:CDS
GAGGCAACTCTTTCATGCTG+TGG 0.549574 2_2:+63160041 None:intergenic
ATTTGCATGAAGGTGGGTAT+GGG 0.550161 2_2:-63160664 Msa0263620:intron
GACTTTCATCGACAAAGCTG+TGG 0.562460 2_2:-63160435 Msa0263620:CDS
AGCTCCTTGAGGTGATAACA+TGG 0.564557 2_2:-63160631 Msa0263620:CDS
CAGCTTACTGGTGAAACAGT+AGG 0.570843 2_2:-63163683 Msa0263620:CDS
ATGGTGGTCGACATGTAATT+GGG 0.573816 2_2:-63164935 Msa0263620:intron
GATATGAGTGGTTGATGGTG+TGG 0.576120 2_2:+63165419 None:intergenic
AATATTGATCTAGTTTATGG+AGG 0.578824 2_2:-63165002 Msa0263620:CDS
TTGAATGAATGGTGAAAGAG+GGG 0.580105 2_2:-63165618 None:intergenic
AGTTGCCTCCAAGCTAAGCT+GGG 0.587565 2_2:-63160027 Msa0263620:CDS
CCATCAACCACTCATATCAA+AGG 0.611945 2_2:-63165414 Msa0263620:five_prime_UTR
GAGCCCATGTTATCACCTCA+AGG 0.614099 2_2:+63160627 None:intergenic
TCAAAATGTGAGACAACTCA+AGG 0.622102 2_2:-63159906 Msa0263620:three_prime_UTR
TTTCATCGACAAAGCTGTGG+AGG 0.624003 2_2:-63160432 Msa0263620:CDS
CAAAACACTAATGCCAAGAG+AGG 0.626831 2_2:-63164722 Msa0263620:intron
GACACTTGAGGAGCTCCTTG+AGG 0.631827 2_2:-63160642 Msa0263620:CDS
GACTCGTCTATAGGGAACCA+AGG 0.651655 2_2:+63165526 None:intergenic
CAATTATATGGCGAGCTGTG+GGG 0.655172 2_2:+63160396 None:intergenic
AGGTGGGTATGGGACACTTG+AGG 0.655697 2_2:-63160654 Msa0263620:CDS
GCTCCTTGAGGTGATAACAT+GGG 0.684486 2_2:-63160630 Msa0263620:CDS
TTGATGGTGTGGTATAAGCG+CGG 0.761838 2_2:+63165430 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTTATATTTTGTTA+TGG + chr2_2:63160261-63160280 None:intergenic 10.0%
!!! TTGTATTTTGATATATAAAA+AGG - chr2_2:63160360-63160379 Msa0263620:CDS 10.0%
!! ATGATAAAGAATATAAAAAA+GGG + chr2_2:63161055-63161074 None:intergenic 10.0%
!!! AAATTAAAGTTTACATTTTA+TGG + chr2_2:63162049-63162068 None:intergenic 10.0%
!! TTCATGATGATAATAAAATA+AGG + chr2_2:63160172-63160191 None:intergenic 15.0%
!! GATGATAAAGAATATAAAAA+AGG + chr2_2:63161056-63161075 None:intergenic 15.0%
!!! GTGTCATTTTAATTATTTTT+TGG + chr2_2:63161311-63161330 None:intergenic 15.0%
!! CTTCTAATATTTGATTAAAT+GGG - chr2_2:63162073-63162092 Msa0263620:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_2:63162371-63162390 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_2:63162395-63162414 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_2:63162394-63162413 Msa0263620:intron 15.0%
!! TAAAATGAAAAGAGAAAAAA+AGG + chr2_2:63162669-63162688 None:intergenic 15.0%
!!! TTTTTTTCTCTTTTCATTTT+AGG - chr2_2:63162668-63162687 Msa0263620:intron 15.0%
!! ATTTGTCATGTAATAATTAA+TGG + chr2_2:63163477-63163496 None:intergenic 15.0%
!! AAACATCAAAAATAAAGATT+AGG - chr2_2:63163530-63163549 Msa0263620:intron 15.0%
!!! AAAGATTATTGAATATTTTG+AGG - chr2_2:63164040-63164059 Msa0263620:intron 15.0%
!!! GATGATTGTATATTTTTTTA+AGG + chr2_2:63164596-63164615 None:intergenic 15.0%
!!! ATAAAAGTTTTTGTTTTTGA+AGG - chr2_2:63164895-63164914 Msa0263620:intron 15.0%
!!! TGTTTCTACTTTAATTACTA+TGG + chr2_2:63159802-63159821 None:intergenic 20.0%
!! ATATCATATCATAGGTATAT+AGG + chr2_2:63160315-63160334 None:intergenic 20.0%
!! TATATACCTATGATATGATA+TGG - chr2_2:63160314-63160333 Msa0263620:intron 20.0%
!!! AGAAATATTGATCTAGTTTA+TGG - chr2_2:63160388-63160407 Msa0263620:CDS 20.0%
!! AGTTTGTAAATTTGAACTAT+AGG + chr2_2:63160925-63160944 None:intergenic 20.0%
!! TATATTCTTTATCATCATTG+AGG - chr2_2:63161060-63161079 Msa0263620:intron 20.0%
!! TTAAATGATTAAACATTGCA+AGG - chr2_2:63161207-63161226 Msa0263620:intron 20.0%
!! ATTAAGCGTCATTTAAAAAT+TGG + chr2_2:63161263-63161282 None:intergenic 20.0%
!! TTGAATAAAATTATCCTTAG+TGG + chr2_2:63161375-63161394 None:intergenic 20.0%
!! AAATATCGACAGTTAATATA+TGG + chr2_2:63161404-63161423 None:intergenic 20.0%
!! CCATTTAATCAAATATTAGA+AGG + chr2_2:63162075-63162094 None:intergenic 20.0%
!! CCTTCTAATATTTGATTAAA+TGG - chr2_2:63162072-63162091 Msa0263620:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_2:63162385-63162404 Msa0263620:intron 20.0%
!! ATGATTAAAAAGAAAGAGAA+TGG + chr2_2:63162428-63162447 None:intergenic 20.0%
!! TTATGTGTAATTCATCTTAA+AGG + chr2_2:63162827-63162846 None:intergenic 20.0%
!! TTAAAAGTTGACAAATTCAA+TGG - chr2_2:63162885-63162904 Msa0263620:intron 20.0%
!!! TTGTTGGTTAAAATCTATAT+AGG - chr2_2:63163010-63163029 Msa0263620:intron 20.0%
!!! ATTTGTTTTAGGTTAAAAGA+TGG + chr2_2:63163182-63163201 None:intergenic 20.0%
!!! GGTTAAGTTTTATTTGTTTT+AGG + chr2_2:63163193-63163212 None:intergenic 20.0%
!!! AAAATATTTTCCCTGAAAAA+CGG - chr2_2:63163343-63163362 Msa0263620:intron 20.0%
!!! CTTATCACTTTTCAATTAAT+GGG + chr2_2:63163561-63163580 None:intergenic 20.0%
!!! TCTTATCACTTTTCAATTAA+TGG + chr2_2:63163562-63163581 None:intergenic 20.0%
!! TTAATTGAAAAGTGATAAGA+TGG - chr2_2:63163562-63163581 Msa0263620:intron 20.0%
!!! ATTATATTTCAAGTAACGTT+TGG + chr2_2:63163779-63163798 None:intergenic 20.0%
!! ATCAAAATACCTATTATTGA+AGG + chr2_2:63163838-63163857 None:intergenic 20.0%
!! ATTACGATAAAGTAAAACAA+AGG + chr2_2:63163876-63163895 None:intergenic 20.0%
!! AAAACCAAATCAATAATGTT+TGG + chr2_2:63164087-63164106 None:intergenic 20.0%
!!! AGAAAAATTGGTTTCAAAAT+GGG + chr2_2:63164673-63164692 None:intergenic 20.0%
!!! TAGAAAAATTGGTTTCAAAA+TGG + chr2_2:63164674-63164693 None:intergenic 20.0%
!!! GCAAATTTTATCTCATAAAA+GGG + chr2_2:63164871-63164890 None:intergenic 20.0%
!!! AGCAAATTTTATCTCATAAA+AGG + chr2_2:63164872-63164891 None:intergenic 20.0%
!!! AGAATTAGTTTTCATTCTTT+TGG - chr2_2:63165306-63165325 Msa0263620:CDS 20.0%
! CGGTTATATGGTATATATAA+AGG + chr2_2:63159946-63159965 None:intergenic 25.0%
! TATTGAACTTGGAAAAGAAT+TGG - chr2_2:63160112-63160131 Msa0263620:intron 25.0%
! TCAAAAGAATTTGACGTATT+TGG - chr2_2:63160285-63160304 Msa0263620:intron 25.0%
! TAAACACCATATCATATCAT+AGG + chr2_2:63160323-63160342 None:intergenic 25.0%
!! AATATTGATCTAGTTTATGG+AGG - chr2_2:63160391-63160410 Msa0263620:CDS 25.0%
!! TCTTCTTCTTAAACCTATTT+TGG - chr2_2:63160509-63160528 Msa0263620:intron 25.0%
! ATATTGAGATAACAAAAGCA+TGG + chr2_2:63160812-63160831 None:intergenic 25.0%
! CCAAGCTTAAATTTATGATA+GGG + chr2_2:63161131-63161150 None:intergenic 25.0%
! ACAAATAAAAAAATGTGTCG+CGG + chr2_2:63161480-63161499 None:intergenic 25.0%
!! ATGTAATGATGAGTTTTTGA+AGG + chr2_2:63161554-63161573 None:intergenic 25.0%
! AGTGATATGAGTATTTAGTA+GGG + chr2_2:63161611-63161630 None:intergenic 25.0%
! CTATTGTTTCAGTGATAATT+TGG - chr2_2:63161668-63161687 Msa0263620:intron 25.0%
! ATGATTCACAAGTTTAATAG+TGG + chr2_2:63162157-63162176 None:intergenic 25.0%
!! AGTAGTGATTCACTAATTTT+TGG + chr2_2:63162181-63162200 None:intergenic 25.0%
!! TATGTGTTGGTATATTTAGA+TGG - chr2_2:63162519-63162538 Msa0263620:intron 25.0%
!!! TTGGAAAGCACTTAAATTTT+TGG - chr2_2:63162777-63162796 Msa0263620:intron 25.0%
!! TTTTAACCAACAAAAAGAGT+AGG + chr2_2:63163003-63163022 None:intergenic 25.0%
! ATGTGATTCCTATGTAAATT+TGG + chr2_2:63163040-63163059 None:intergenic 25.0%
!! GTAAGTTCAAAAATTCCTTT+TGG + chr2_2:63163423-63163442 None:intergenic 25.0%
!! TATAGTTGATACGATCAAAT+TGG - chr2_2:63163675-63163694 Msa0263620:CDS 25.0%
! GAGAAATTCTAATATAGTCA+CGG - chr2_2:63163944-63163963 Msa0263620:intron 25.0%
! AGAAATTCTAATATAGTCAC+GGG - chr2_2:63163945-63163964 Msa0263620:intron 25.0%
!!! ATTTTTTTTTCCTGATGGTA+CGG + chr2_2:63164426-63164445 None:intergenic 25.0%
!!! AGACAATTTTTTTTTCCTGA+TGG + chr2_2:63164431-63164450 None:intergenic 25.0%
!! TTTCTTCTGAGTTTGAATTT+TGG + chr2_2:63164530-63164549 None:intergenic 25.0%
!!! ATTTTTTTAAGGACCAATGT+TGG + chr2_2:63164585-63164604 None:intergenic 25.0%
! ATACAATCATCTAACAAAAC+TGG - chr2_2:63164605-63164624 Msa0263620:intron 25.0%
! TACAATCATCTAACAAAACT+GGG - chr2_2:63164606-63164625 Msa0263620:intron 25.0%
! GGTACTAGAAATAGAAAAAT+TGG + chr2_2:63164685-63164704 None:intergenic 25.0%
!!! TAGTACCATGTTTTCTAAAA+GGG - chr2_2:63164698-63164717 Msa0263620:intron 25.0%
!!! TATAACCCTTTTAGAAAACA+TGG + chr2_2:63164706-63164725 None:intergenic 25.0%
! GGTTATATATATTTGCATGA+AGG - chr2_2:63164719-63164738 Msa0263620:intron 25.0%
! TATATATATTTGCATGAAGG+TGG - chr2_2:63164722-63164741 Msa0263620:intron 25.0%
! ATATATATTTGCATGAAGGT+GGG - chr2_2:63164723-63164742 Msa0263620:CDS 25.0%
! TGTAGAATGAAAATCTTTAC+CGG + chr2_2:63164812-63164831 None:intergenic 25.0%
!!! AAAGTTTTTGTTTTTGAAGG+TGG - chr2_2:63164898-63164917 Msa0263620:intron 25.0%
!!! AAGTTTTTGTTTTTGAAGGT+GGG - chr2_2:63164899-63164918 Msa0263620:intron 25.0%
!!! ATATTTTTGACAAGCTCTTT+TGG + chr2_2:63165037-63165056 None:intergenic 25.0%
! AAAAGAGCTTGTCAAAAATA+TGG - chr2_2:63165036-63165055 Msa0263620:intron 25.0%
!! TCTTAGATTTCACAATTTTG+AGG + chr2_2:63165413-63165432 None:intergenic 25.0%
!! TGAAATCTAAGATGATTAGA+TGG - chr2_2:63165421-63165440 Msa0263620:five_prime_UTR 25.0%
!! GTTAATGTAAACTATCGATT+TGG - chr2_2:63165575-63165594 Msa0263620:five_prime_UTR 25.0%
! ACATTGTATCAAGTTTTCCT+TGG - chr2_2:63159850-63159869 Msa0263620:three_prime_UTR 30.0%
!! TCAGCATCATTTTAATGATG+TGG - chr2_2:63159888-63159907 Msa0263620:three_prime_UTR 30.0%
! AAGAGAATTTGTGTGTTTTG+TGG - chr2_2:63160050-63160069 Msa0263620:CDS 30.0%
!!! TATAGCTAGTTTTGTTACCA+GGG + chr2_2:63160082-63160101 None:intergenic 30.0%
!!! TTATAGCTAGTTTTGTTACC+AGG + chr2_2:63160083-63160102 None:intergenic 30.0%
TGGTAACAAAACTAGCTATA+AGG - chr2_2:63160082-63160101 Msa0263620:intron 30.0%
GGTTTCTGTAAATCCAAAAT+AGG + chr2_2:63160525-63160544 None:intergenic 30.0%
CGATAAATTTGACGATATCA+CGG + chr2_2:63160570-63160589 None:intergenic 30.0%
CTTATCTATCAATATACACC+TGG - chr2_2:63160943-63160962 Msa0263620:intron 30.0%
! AGAATCTAAAGGGTGTAATA+TGG + chr2_2:63161020-63161039 None:intergenic 30.0%
AATGCCAATGAGAATCTAAA+GGG + chr2_2:63161030-63161049 None:intergenic 30.0%
TAATGCCAATGAGAATCTAA+AGG + chr2_2:63161031-63161050 None:intergenic 30.0%
CCCTATCATAAATTTAAGCT+TGG - chr2_2:63161128-63161147 Msa0263620:intron 30.0%
GCCAAGCTTAAATTTATGAT+AGG + chr2_2:63161132-63161151 None:intergenic 30.0%
TTAAATGACGCTTAATTGCA+AGG - chr2_2:63161267-63161286 Msa0263620:intron 30.0%
AAAATGCATTTGTATCAGCA+GGG + chr2_2:63161581-63161600 None:intergenic 30.0%
AAAAATGCATTTGTATCAGC+AGG + chr2_2:63161582-63161601 None:intergenic 30.0%
! TGCTGATACAAATGCATTTT+TGG - chr2_2:63161581-63161600 Msa0263620:intron 30.0%
GAGTGATATGAGTATTTAGT+AGG + chr2_2:63161612-63161631 None:intergenic 30.0%
AAATATTGGAGCTAGAAAGA+AGG + chr2_2:63161830-63161849 None:intergenic 30.0%
! TAGCTCCAATATTTTTCTCA+TGG - chr2_2:63161836-63161855 Msa0263620:intron 30.0%
! TCCAATATTTTTCTCATGGA+TGG - chr2_2:63161840-63161859 Msa0263620:intron 30.0%
ACCATCCATGAGAAAAATAT+TGG + chr2_2:63161844-63161863 None:intergenic 30.0%
TGTGGAATGTAAATTCCAAT+AGG - chr2_2:63161863-63161882 Msa0263620:intron 30.0%
TTCCAATAGGTGATTCATTA+AGG - chr2_2:63161876-63161895 Msa0263620:intron 30.0%
CGAATTTGGATTTATGAAGT+TGG - chr2_2:63161962-63161981 Msa0263620:intron 30.0%
ATTTGGATTTATGAAGTTGG+AGG - chr2_2:63161965-63161984 Msa0263620:intron 30.0%
GGGTATCTCTATAAATGTAA+GGG - chr2_2:63162123-63162142 Msa0263620:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_2:63162477-63162496 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_2:63162478-63162497 Msa0263620:intron 30.0%
GTATTATTGGTCATATGTGT+TGG - chr2_2:63162506-63162525 Msa0263620:intron 30.0%
AAAGTGGGGAAAAAATTGAT+TGG + chr2_2:63162754-63162773 None:intergenic 30.0%
!!! ATTTTTTCCCCACTTTTTGT+TGG - chr2_2:63162758-63162777 Msa0263620:intron 30.0%
!!! ATTTTTGGAATTTGCAAGAG+TGG - chr2_2:63162792-63162811 Msa0263620:intron 30.0%
AAGAGTAGGTTGTAAAGTTT+AGG + chr2_2:63162989-63163008 None:intergenic 30.0%
! TTACAACCTACTCTTTTTGT+TGG - chr2_2:63162994-63163013 Msa0263620:intron 30.0%
TGATTCCTATGTAAATTTGG+TGG + chr2_2:63163037-63163056 None:intergenic 30.0%
! ATCATCTGAGTTGGATAATT+TGG + chr2_2:63163214-63163233 None:intergenic 30.0%
AGCTTATTAATCATCTGAGT+TGG + chr2_2:63163223-63163242 None:intergenic 30.0%
CTTTCAAAGCCTTCAATAAT+AGG - chr2_2:63163826-63163845 Msa0263620:intron 30.0%
! GTGTCCAAACATTATTGATT+TGG - chr2_2:63164080-63164099 Msa0263620:intron 30.0%
GAGATTAAAGTGTGTGAAAA+CGG + chr2_2:63164269-63164288 None:intergenic 30.0%
!!! CCTACAACTTTTTTAACTCT+AGG + chr2_2:63164506-63164525 None:intergenic 30.0%
CCTAGAGTTAAAAAAGTTGT+AGG - chr2_2:63164503-63164522 Msa0263620:intron 30.0%
!! AATGTTGGTGATTAGTTGTT+AGG + chr2_2:63164570-63164589 None:intergenic 30.0%
TAACAACTAATCACCAACAT+TGG - chr2_2:63164569-63164588 Msa0263620:intron 30.0%
ACAATCATCTAACAAAACTG+GGG - chr2_2:63164607-63164626 Msa0263620:intron 30.0%
! CTAGTACCATGTTTTCTAAA+AGG - chr2_2:63164697-63164716 Msa0263620:intron 30.0%
!! AAATCTTTACCGGTTTATCA+TGG + chr2_2:63164802-63164821 None:intergenic 30.0%
TTTGTCGATGAAAGTCAAAA+AGG + chr2_2:63164954-63164973 None:intergenic 30.0%
! GTTGGATAGAAGTATATAGA+TGG + chr2_2:63165070-63165089 None:intergenic 30.0%
TAGTCTATTCTCAGTTCAAT+CGG + chr2_2:63165106-63165125 None:intergenic 30.0%
GAACTGAGAATAGACTAATT+AGG - chr2_2:63165109-63165128 Msa0263620:intron 30.0%
AAGATTGAACCGCATTAAAT+CGG - chr2_2:63165183-63165202 Msa0263620:intron 30.0%
TTGAAGAACCAGTGAAAATT+CGG + chr2_2:63165277-63165296 None:intergenic 30.0%
!!! TCTTTTGGTTTCATTCATGT+AGG - chr2_2:63165321-63165340 Msa0263620:CDS 30.0%
! ATTGATCTAGTTTATGGAGG+AGG - chr2_2:63160394-63160413 Msa0263620:CDS 35.0%
ATTTCCCAAGCTGTTTATGA+TGG - chr2_2:63160439-63160458 Msa0263620:CDS 35.0%
TAAATTTGACGATATCACGG+TGG + chr2_2:63160567-63160586 None:intergenic 35.0%
! TCTCTTGGCATTAGTGTTTT+GGG + chr2_2:63160672-63160691 None:intergenic 35.0%
TGTGCGATTATTCATTCAAG+TGG - chr2_2:63160856-63160875 Msa0263620:intron 35.0%
GTGCGATTATTCATTCAAGT+GGG - chr2_2:63160857-63160876 Msa0263620:intron 35.0%
GAAAGACAAAATGGTTCAGA+AGG + chr2_2:63160987-63161006 None:intergenic 35.0%
ACATGGAGAGAAAGACAAAA+TGG + chr2_2:63160996-63161015 None:intergenic 35.0%
! AAAGGGTGTAATATGGAACA+TGG + chr2_2:63161013-63161032 None:intergenic 35.0%
TACACCCTTTAGATTCTCAT+TGG - chr2_2:63161023-63161042 Msa0263620:intron 35.0%
CCTTAGTGGAGTTTATTCAT+AGG + chr2_2:63161361-63161380 None:intergenic 35.0%
CCTATGAATAAACTCCACTA+AGG - chr2_2:63161358-63161377 Msa0263620:intron 35.0%
!! GATGAGTTTTTGAAGGTAGT+GGG + chr2_2:63161547-63161566 None:intergenic 35.0%
!! TGATGAGTTTTTGAAGGTAG+TGG + chr2_2:63161548-63161567 None:intergenic 35.0%
! TATTTTTCTCATGGATGGTG+TGG - chr2_2:63161845-63161864 Msa0263620:intron 35.0%
TGCCTTAATGAATCACCTAT+TGG + chr2_2:63161881-63161900 None:intergenic 35.0%
TCATTAAGGCACATGTCAAA+AGG - chr2_2:63161890-63161909 Msa0263620:intron 35.0%
CAAATTCGTCTATAGTCATG+CGG + chr2_2:63161950-63161969 None:intergenic 35.0%
! GGGGTATCTCTATAAATGTA+AGG - chr2_2:63162122-63162141 Msa0263620:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_2:63162242-63162261 None:intergenic 35.0%
GGAAAAAATTGATTGGCAGT+TGG + chr2_2:63162747-63162766 None:intergenic 35.0%
AGTGCTTTCCAACAAAAAGT+GGG + chr2_2:63162769-63162788 None:intergenic 35.0%
AAGTGCTTTCCAACAAAAAG+TGG + chr2_2:63162770-63162789 None:intergenic 35.0%
GACAAATTCAATGGAAGAGA+TGG - chr2_2:63162894-63162913 Msa0263620:intron 35.0%
CAATATCAATCGCTACTCAT+TGG + chr2_2:63162932-63162951 None:intergenic 35.0%
TAGGTCCACCAAATTTACAT+AGG - chr2_2:63163029-63163048 Msa0263620:intron 35.0%
TAGGTTAAAAGATGGTTGAC+TGG + chr2_2:63163174-63163193 None:intergenic 35.0%
!! AGGTCTAATTCCGTTTTTCA+GGG + chr2_2:63163356-63163375 None:intergenic 35.0%
! AATTCCTTTTGGACATCGTA+TGG + chr2_2:63163412-63163431 None:intergenic 35.0%
! TAATTAATGGACAACCGAAG+TGG + chr2_2:63163464-63163483 None:intergenic 35.0%
TGCAAGATCGATGTAAGAAT+GGG + chr2_2:63163922-63163941 None:intergenic 35.0%
TTGCAAGATCGATGTAAGAA+TGG + chr2_2:63163923-63163942 None:intergenic 35.0%
ATTCTTACATCGATCTTGCA+AGG - chr2_2:63163922-63163941 Msa0263620:intron 35.0%
! GTGACCAAACACTATTTTCT+TGG + chr2_2:63163972-63163991 None:intergenic 35.0%
!!! TTGATTTGGTTTTGTGACCA+TGG - chr2_2:63164094-63164113 Msa0263620:intron 35.0%
AAGAATATCTCTCTTGCAAG+TGG - chr2_2:63164117-63164136 Msa0263620:intron 35.0%
! CTATATCTTTGGGTTTGTGT+GGG + chr2_2:63164147-63164166 None:intergenic 35.0%
CACACAAACCCAAAGATATA+GGG - chr2_2:63164146-63164165 Msa0263620:intron 35.0%
ACACAAACCCAAAGATATAG+GGG - chr2_2:63164147-63164166 Msa0263620:intron 35.0%
CTCAGCTACTAGAATTTGAT+CGG - chr2_2:63164286-63164305 Msa0263620:intron 35.0%
AAATCTGCATCCCATGATAA+GGG - chr2_2:63164348-63164367 Msa0263620:intron 35.0%
AAAAACAAATCCGTACCATC+AGG - chr2_2:63164413-63164432 Msa0263620:intron 35.0%
TTGGTGCAGACACAATTATA+TGG + chr2_2:63165012-63165031 None:intergenic 35.0%
AGAGCTTGTCAAAAATATGG+AGG - chr2_2:63165039-63165058 Msa0263620:intron 35.0%
ATCGGTTAAATCGAAAACGT+TGG + chr2_2:63165088-63165107 None:intergenic 35.0%
CTGAGAATAGACTAATTAGG+TGG - chr2_2:63165112-63165131 Msa0263620:intron 35.0%
GAATAGACTAATTAGGTGGT+TGG - chr2_2:63165116-63165135 Msa0263620:intron 35.0%
!! TTAGGTGGTTGGTTTAATCT+AGG - chr2_2:63165127-63165146 Msa0263620:intron 35.0%
! AATTCGGGTTATGGTTCAAT+TGG + chr2_2:63165261-63165280 None:intergenic 35.0%
TGAAGAACCAGTGAAAATTC+GGG + chr2_2:63165276-63165295 None:intergenic 35.0%
GATGATTAGATGGTAATCGA+TGG - chr2_2:63165431-63165450 Msa0263620:five_prime_UTR 35.0%
TCAAAATGTGAGACAACTCA+AGG - chr2_2:63165487-63165506 Msa0263620:five_prime_UTR 35.0%
GGTAGAAGATCACAATTTCA+TGG - chr2_2:63165519-63165538 Msa0263620:five_prime_UTR 35.0%
! GTAAGAGCACACAAAAATCT+CGG + chr2_2:63165547-63165566 None:intergenic 35.0%
!! ATGATGCTGACTCGTCTATA+GGG + chr2_2:63159878-63159897 None:intergenic 40.0%
!! AATGATGCTGACTCGTCTAT+AGG + chr2_2:63159879-63159898 None:intergenic 40.0%
CCTTTGATATGAGTGGTTGA+TGG + chr2_2:63159982-63160001 None:intergenic 40.0%
CCATCAACCACTCATATCAA+AGG - chr2_2:63159979-63159998 Msa0263620:three_prime_UTR 40.0%
TCTCTCACCTTTGATATGAG+TGG + chr2_2:63159989-63160008 None:intergenic 40.0%
TCAAAGGTGAGAGAGAAGAA+TGG - chr2_2:63159995-63160014 Msa0263620:exon 40.0%
AAGGATGCTGCTATTGAACT+TGG - chr2_2:63160101-63160120 Msa0263620:intron 40.0%
ACCACCATCATAAACAGCTT+GGG + chr2_2:63160446-63160465 None:intergenic 40.0%
ATGGTGGTCGACATGTAATT+GGG - chr2_2:63160458-63160477 Msa0263620:CDS 40.0%
GAAGAAGAAGATGAAGCTCT+TGG + chr2_2:63160488-63160507 None:intergenic 40.0%
! CTCTCTTGGCATTAGTGTTT+TGG + chr2_2:63160673-63160692 None:intergenic 40.0%
CAAAACACTAATGCCAAGAG+AGG - chr2_2:63160671-63160690 Msa0263620:intron 40.0%
CTGCATAACTTTACCTCTCT+TGG + chr2_2:63160687-63160706 None:intergenic 40.0%
GAGGTAAAGTTATGCAGCTT+TGG - chr2_2:63160690-63160709 Msa0263620:intron 40.0%
TTCATTCAAGTGGGAACTAG+TGG - chr2_2:63160866-63160885 Msa0263620:intron 40.0%
TCAATATACACCTGGCAATC+TGG - chr2_2:63160951-63160970 Msa0263620:intron 40.0%
CAATATACACCTGGCAATCT+GGG - chr2_2:63160952-63160971 Msa0263620:intron 40.0%
AATATACACCTGGCAATCTG+GGG - chr2_2:63160953-63160972 Msa0263620:intron 40.0%
GCATCAAAGGAAAGCTGAAA+TGG - chr2_2:63161757-63161776 Msa0263620:intron 40.0%
TTGTTTGTACCAACCTGGTA+AGG + chr2_2:63161807-63161826 None:intergenic 40.0%
CGCATGACTATAGACGAATT+TGG - chr2_2:63161948-63161967 Msa0263620:intron 40.0%
TTGTCACGATTGCATGAATG+CGG + chr2_2:63161994-63162013 None:intergenic 40.0%
TCATGCAATCGTGACAACAT+CGG - chr2_2:63161997-63162016 Msa0263620:intron 40.0%
ATATTCTAACCGCGTGAACT+AGG - chr2_2:63162101-63162120 Msa0263620:intron 40.0%
TATTCTAACCGCGTGAACTA+GGG - chr2_2:63162102-63162121 Msa0263620:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_2:63162482-63162501 None:intergenic 40.0%
TGTGCTGCGTATTAATTGGA+GGG + chr2_2:63162342-63162361 None:intergenic 40.0%
GTAGTGTGCTGCGTATTAAT+TGG + chr2_2:63162346-63162365 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_2:63162482-63162501 Msa0263620:intron 40.0%
!! TGAAACGGAGGGAGTATTAT+TGG - chr2_2:63162493-63162512 Msa0263620:intron 40.0%
GTGCTTTCCAACAAAAAGTG+GGG + chr2_2:63162768-63162787 None:intergenic 40.0%
!! GAGGTCTAATTCCGTTTTTC+AGG + chr2_2:63163357-63163376 None:intergenic 40.0%
GACATGTCAATACGACTTAG+AGG + chr2_2:63163376-63163395 None:intergenic 40.0%
AAGACCATACGATGTCCAAA+AGG - chr2_2:63163405-63163424 Msa0263620:intron 40.0%
ATTACATGAATGCGCCACTT+CGG - chr2_2:63163447-63163466 Msa0263620:intron 40.0%
!! GAAGGCTTTGAAAGCGATTA+AGG + chr2_2:63163820-63163839 None:intergenic 40.0%
GGGACCAAGAAAATAGTGTT+TGG - chr2_2:63163965-63163984 Msa0263620:intron 40.0%
GCAAGAGAGATATTCTTCCA+TGG + chr2_2:63164114-63164133 None:intergenic 40.0%
! CCTATATCTTTGGGTTTGTG+TGG + chr2_2:63164148-63164167 None:intergenic 40.0%
CCACACAAACCCAAAGATAT+AGG - chr2_2:63164145-63164164 Msa0263620:intron 40.0%
GCTACTAGAATTTGATCGGA+TGG - chr2_2:63164290-63164309 Msa0263620:intron 40.0%
GAAATCTGCATCCCATGATA+AGG - chr2_2:63164347-63164366 Msa0263620:intron 40.0%
ATCTAACAAAACTGGGGAAG+TGG - chr2_2:63164613-63164632 Msa0263620:intron 40.0%
TATTTGCATGAAGGTGGGTA+TGG - chr2_2:63164728-63164747 Msa0263620:CDS 40.0%
ATTTGCATGAAGGTGGGTAT+GGG - chr2_2:63164729-63164748 Msa0263620:CDS 40.0%
ACTTGGCATCCATGATAAAC+CGG - chr2_2:63164790-63164809 Msa0263620:intron 40.0%
ACAATTATATGGCGAGCTGT+GGG + chr2_2:63165001-63165020 None:intergenic 40.0%
!! TTGACAAGCTCTTTTGGTGT+TGG + chr2_2:63165031-63165050 None:intergenic 40.0%
! GCGATTCAACCGATTTAATG+CGG + chr2_2:63165195-63165214 None:intergenic 40.0%
GCATTAAATCGGTTGAATCG+CGG - chr2_2:63165194-63165213 Msa0263620:intron 40.0%
! ACCATAACCCGAATTTTCAC+TGG - chr2_2:63165266-63165285 Msa0263620:intron 40.0%
! ACCAGTGAAAATTCGGGTTA+TGG + chr2_2:63165270-63165289 None:intergenic 40.0%
! TTCATTTTCCCAGCTTAGCT+TGG + chr2_2:63165377-63165396 None:intergenic 40.0%
GACAACTCAAGGAACTACTA+TGG - chr2_2:63165498-63165517 Msa0263620:five_prime_UTR 40.0%
GTGGTATAAGCGCGGTTATA+TGG + chr2_2:63159958-63159977 None:intergenic 45.0%
!! TTGATGGTGTGGTATAAGCG+CGG + chr2_2:63159966-63159985 None:intergenic 45.0%
!! GATATGAGTGGTTGATGGTG+TGG + chr2_2:63159977-63159996 None:intergenic 45.0%
TCCCAAGCTGTTTATGATGG+TGG - chr2_2:63160442-63160461 Msa0263620:CDS 45.0%
GACCACCATCATAAACAGCT+TGG + chr2_2:63160447-63160466 None:intergenic 45.0%
! GATGGTGGTCGACATGTAAT+TGG - chr2_2:63160457-63160476 Msa0263620:CDS 45.0%
GGCACAATGCGATTATGCTA+GGG + chr2_2:63160546-63160565 None:intergenic 45.0%
TGGCACAATGCGATTATGCT+AGG + chr2_2:63160547-63160566 None:intergenic 45.0%
ATAAACAACCCCAGATTGCC+AGG + chr2_2:63160964-63160983 None:intergenic 45.0%
! CATTGCAAGGCTAATTTGCC+AGG - chr2_2:63161220-63161239 Msa0263620:intron 45.0%
! TTGCCAGGATTAGCGATTAC+AGG - chr2_2:63161235-63161254 Msa0263620:intron 45.0%
! TGCCAGGATTAGCGATTACA+GGG - chr2_2:63161236-63161255 Msa0263620:intron 45.0%
TGTACTATGCTGCAGCTTAC+TGG - chr2_2:63161698-63161717 Msa0263620:intron 45.0%
CAGCTTACTGGTGAAACAGT+AGG - chr2_2:63161710-63161729 Msa0263620:intron 45.0%
CAGTAGCTGACATGCATCAA+AGG - chr2_2:63161744-63161763 Msa0263620:intron 45.0%
! GATGCCTTTATAGCCTTACC+AGG - chr2_2:63161791-63161810 Msa0263620:intron 45.0%
CCAACCTGGTAAGGCTATAA+AGG + chr2_2:63161798-63161817 None:intergenic 45.0%
! CCTTTATAGCCTTACCAGGT+TGG - chr2_2:63161795-63161814 Msa0263620:intron 45.0%
GAAGGTTGTTTGTACCAACC+TGG + chr2_2:63161812-63161831 None:intergenic 45.0%
ATTCTAACCGCGTGAACTAG+GGG - chr2_2:63162103-63162122 Msa0263620:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_2:63162481-63162500 None:intergenic 45.0%
GTGTGCTGCGTATTAATTGG+AGG + chr2_2:63162343-63162362 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_2:63162481-63162500 Msa0263620:intron 45.0%
CAATGGAAGAGATGGTGAAG+AGG - chr2_2:63162902-63162921 Msa0263620:intron 45.0%
TCATGGGCCCCTATATCTTT+GGG + chr2_2:63164157-63164176 None:intergenic 45.0%
ATCATGGGCCCCTATATCTT+TGG + chr2_2:63164158-63164177 None:intergenic 45.0%
AGATATAGGGGCCCATGATA+AGG - chr2_2:63164159-63164178 Msa0263620:intron 45.0%
GATATAGGGGCCCATGATAA+GGG - chr2_2:63164160-63164179 Msa0263620:intron 45.0%
TGCGTGAAGCAATTACAGCA+GGG + chr2_2:63164195-63164214 None:intergenic 45.0%
GCCATTGAACACTGATCCAA+CGG - chr2_2:63164228-63164247 Msa0263620:intron 45.0%
ACCGTTGGATCAGTGTTCAA+TGG + chr2_2:63164232-63164251 None:intergenic 45.0%
GACAGAACTATCGTAACCGT+TGG + chr2_2:63164247-63164266 None:intergenic 45.0%
CTAGAATTTGATCGGATGGC+TGG - chr2_2:63164294-63164313 Msa0263620:intron 45.0%
AGATTTCCTGCTGTAACAGC+AGG + chr2_2:63164334-63164353 None:intergenic 45.0%
GAGAAAGCTGCCCTTATCAT+GGG + chr2_2:63164361-63164380 None:intergenic 45.0%
AGAGAAAGCTGCCCTTATCA+TGG + chr2_2:63164362-63164381 None:intergenic 45.0%
AGCTCCTTGAGGTGATAACA+TGG - chr2_2:63164762-63164781 Msa0263620:intron 45.0%
GCTCCTTGAGGTGATAACAT+GGG - chr2_2:63164763-63164782 Msa0263620:intron 45.0%
GTGGGATTGCTGAATGTTGA+TGG - chr2_2:63164917-63164936 Msa0263620:intron 45.0%
GACTTTCATCGACAAAGCTG+TGG - chr2_2:63164958-63164977 Msa0263620:CDS 45.0%
TTTCATCGACAAAGCTGTGG+AGG - chr2_2:63164961-63164980 Msa0263620:CDS 45.0%
CAATTATATGGCGAGCTGTG+GGG + chr2_2:63165000-63165019 None:intergenic 45.0%
CACAATTATATGGCGAGCTG+TGG + chr2_2:63165002-63165021 None:intergenic 45.0%
AGGCAACTCTTTCATGCTGT+GGG + chr2_2:63165354-63165373 None:intergenic 45.0%
!! ATTTTCCCAGCTTAGCTTGG+AGG + chr2_2:63165374-63165393 None:intergenic 45.0%
!! AATTAAATATTAGATTTATA+TGG + chr2_2:63161154-63161173 None:intergenic 5.0%
!!! AATATAATTTTGATATATTT+TGG + chr2_2:63162568-63162587 None:intergenic 5.0%
GACTCGTCTATAGGGAACCA+AGG + chr2_2:63159870-63159889 None:intergenic 50.0%
! GTGTTTTGTGGTAGTAGCCC+TGG - chr2_2:63160062-63160081 Msa0263620:intron 50.0%
GTTTATGGAGGAGGCAGCAT+TGG - chr2_2:63160403-63160422 Msa0263620:CDS 50.0%
!! AGGAGGCAGCATTGGTTTGA+TGG - chr2_2:63160411-63160430 Msa0263620:CDS 50.0%
!! GGAGGCAGCATTGGTTTGAT+GGG - chr2_2:63160412-63160431 Msa0263620:CDS 50.0%
!! GAGGCAGCATTGGTTTGATG+GGG - chr2_2:63160413-63160432 Msa0263620:CDS 50.0%
GTCCCTGTAATCGCTAATCC+TGG + chr2_2:63161241-63161260 None:intergenic 50.0%
AGAGATACCCCTAGTTCACG+CGG + chr2_2:63162113-63162132 None:intergenic 50.0%
GGAATTTGCAAGAGTGGTGC+AGG - chr2_2:63162798-63162817 Msa0263620:intron 50.0%
GGATCCAGGTCCCTTATCAT+GGG + chr2_2:63164173-63164192 None:intergenic 50.0%
GCGTGAAGCAATTACAGCAG+GGG + chr2_2:63164194-63164213 None:intergenic 50.0%
CTGCGTGAAGCAATTACAGC+AGG + chr2_2:63164196-63164215 None:intergenic 50.0%
GCTGTAATTGCTTCACGCAG+TGG - chr2_2:63164196-63164215 Msa0263620:intron 50.0%
ATAGCACCTGCTGTTACAGC+AGG - chr2_2:63164325-63164344 Msa0263620:intron 50.0%
ATCGACAAAGCTGTGGAGGA+AGG - chr2_2:63164965-63164984 Msa0263620:CDS 50.0%
GAGGCAACTCTTTCATGCTG+TGG + chr2_2:63165355-63165374 None:intergenic 50.0%
AGTTGCCTCCAAGCTAAGCT+GGG - chr2_2:63165366-63165385 Msa0263620:CDS 50.0%
GGGATCCAGGTCCCTTATCA+TGG + chr2_2:63164174-63164193 None:intergenic 55.0%
GCAATTACAGCAGGGGATCC+AGG + chr2_2:63164187-63164206 None:intergenic 55.0%
AGGTGGGTATGGGACACTTG+AGG - chr2_2:63164739-63164758 Msa0263620:intron 55.0%
GACACTTGAGGAGCTCCTTG+AGG - chr2_2:63164751-63164770 Msa0263620:intron 55.0%
GAGTTGCCTCCAAGCTAAGC+TGG - chr2_2:63165365-63165384 Msa0263620:CDS 55.0%
GGCAGTTGGCACGTCACAAG+TGG + chr2_2:63162733-63162752 None:intergenic 60.0%
GGGGCCCATGATAAGGGACC+TGG - chr2_2:63164166-63164185 Msa0263620:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 63159788 63165627 63159788 ID=Msa0263620;Name=Msa0263620
chr2_2 mRNA 63159788 63165627 63159788 ID=Msa0263620-mRNA-1;Parent=Msa0263620;Name=Msa0263620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=226|1|1|1|0.71|0.75|8|191|209
chr2_2 exon 63159788 63159947 63159788 ID=Msa0263620-mRNA-1:exon:19597;Parent=Msa0263620-mRNA-1
chr2_2 exon 63159976 63160072 63159976 ID=Msa0263620-mRNA-1:exon:19596;Parent=Msa0263620-mRNA-1
chr2_2 exon 63160355 63160498 63160355 ID=Msa0263620-mRNA-1:exon:19595;Parent=Msa0263620-mRNA-1
chr2_2 exon 63160604 63160674 63160604 ID=Msa0263620-mRNA-1:exon:19594;Parent=Msa0263620-mRNA-1
chr2_2 exon 63163603 63163702 63163603 ID=Msa0263620-mRNA-1:exon:19593;Parent=Msa0263620-mRNA-1
chr2_2 exon 63164723 63164753 63164723 ID=Msa0263620-mRNA-1:exon:19592;Parent=Msa0263620-mRNA-1
chr2_2 exon 63164936 63165033 63164936 ID=Msa0263620-mRNA-1:exon:19591;Parent=Msa0263620-mRNA-1
chr2_2 exon 63165282 63165627 63165282 ID=Msa0263620-mRNA-1:exon:19590;Parent=Msa0263620-mRNA-1
chr2_2 five_prime_UTR 63165402 63165627 63165402 ID=Msa0263620-mRNA-1:five_prime_utr;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63165282 63165401 63165282 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63164936 63165033 63164936 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63164723 63164753 63164723 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63163603 63163702 63163603 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63160604 63160674 63160604 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63160355 63160498 63160355 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 CDS 63160007 63160072 63160007 ID=Msa0263620-mRNA-1:cds;Parent=Msa0263620-mRNA-1
chr2_2 three_prime_UTR 63159976 63160006 63159976 ID=Msa0263620-mRNA-1:three_prime_utr;Parent=Msa0263620-mRNA-1
chr2_2 three_prime_UTR 63159788 63159947 63159788 ID=Msa0263620-mRNA-1:three_prime_utr;Parent=Msa0263620-mRNA-1
Gene Sequence

>Msa0263620

ATGGAGAGAGAGATAGAGATGAAGCTATCAAAGTTTAAGAGAATTTGTGTGTTTTGTGGTAGTAGCCCTGGTAACAAAACTAGCTATAAGGATGCTGCTATTGAACTTGGAAAAGAATTGGTTTCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCCCAAGCTGTTTATGATGGTGGTCGACATGTAATTGGAGTGATTCCCAAAACACTAATGCCAAGAGAGCTTACTGGTGAAACAGTAGGAGAAGTGAAAGCAGTAGCTGACATGCATCAAAGGAAAGCTGAAATGGCTAGAAATTCTGATGCCTTTATAGCCTTACCAGGTGGGTATGGGACACTTGAGGAGCTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATTCCTTTTTGACTTTCATCGACAAAGCTGTGGAGGAAGGATTCATTAGCCCCACAGCTCGCCATATAATTGTGTCTGCACCAACACCAAAAGAGCTTGTCAAAAATATGGAGGAGTATTTCCCACAGCATGAAAGAGTTGCCTCCAAGCTAAGCTGGGAAAATGAACAGCTAGATTAG

Protein sequence

>Msa0263620

MEREIEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMARNSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLTFIDKAVEEGFISPTARHIIVSAPTPKELVKNMEEYFPQHERVASKLSWENEQLD*