Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257610 | XP_003608726.2 | 78.932 | 674 | 77 | 4 | 1 | 609 | 85 | 758 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257610 | G7JIY0 | 78.932 | 674 | 77 | 4 | 1 | 609 | 85 | 758 | 0.0 | 1031 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063940 | Msa1257610 | 0.817973 | 2.497503e-52 | -8.615850e-47 |
| Msa0657710 | Msa1257610 | 0.804722 | 1.884608e-49 | -8.615850e-47 |
| Msa0657720 | Msa1257610 | 0.831685 | 1.450803e-55 | -8.615850e-47 |
| Msa0702790 | Msa1257610 | 0.826038 | 3.376721e-54 | -8.615850e-47 |
| Msa0702800 | Msa1257610 | 0.804941 | 1.696039e-49 | -8.615850e-47 |
| Msa0723090 | Msa1257610 | 0.817388 | 3.384925e-52 | -8.615850e-47 |
| Msa0828950 | Msa1257610 | 0.829040 | 6.430689e-55 | -8.615850e-47 |
| Msa0828960 | Msa1257610 | 0.805387 | 1.368112e-49 | -8.615850e-47 |
| Msa0217060 | Msa1257610 | 0.804799 | 1.816606e-49 | -8.615850e-47 |
| Msa1238600 | Msa1257610 | 0.802162 | 6.392925e-49 | -8.615850e-47 |
| Msa1255210 | Msa1257610 | 0.840291 | 9.500843e-58 | -8.615850e-47 |
| Msa1257610 | Msa1295650 | 0.835972 | 1.228779e-56 | -8.615850e-47 |
| Msa1257610 | Msa1323010 | 0.802071 | 6.677263e-49 | -8.615850e-47 |
| Msa1257610 | Msa1439250 | 0.808907 | 2.458512e-50 | -8.615850e-47 |
| Msa1257610 | Msa1439930 | 0.818893 | 1.545066e-52 | -8.615850e-47 |
| Msa1015360 | Msa1257610 | 0.823492 | 1.345521e-53 | -8.615850e-47 |
| Msa1019420 | Msa1257610 | 0.806189 | 9.281308e-50 | -8.615850e-47 |
| Msa1034450 | Msa1257610 | 0.803202 | 3.900630e-49 | -8.615850e-47 |
| Msa1044250 | Msa1257610 | 0.808263 | 3.375222e-50 | -8.615850e-47 |
| Msa1074200 | Msa1257610 | 0.805372 | 1.377760e-49 | -8.615850e-47 |
| Msa1092310 | Msa1257610 | 0.806718 | 7.179214e-50 | -8.615850e-47 |
| Msa0256920 | Msa1257610 | 0.804125 | 2.509735e-49 | -8.615850e-47 |
| Msa0334630 | Msa1257610 | 0.804237 | 2.378983e-49 | -8.615850e-47 |
| Msa1133700 | Msa1257610 | 0.802742 | 4.854911e-49 | -8.615850e-47 |
| Msa1202800 | Msa1257610 | 0.840258 | 9.691447e-58 | -8.615850e-47 |
| Msa1207390 | Msa1257610 | 0.992606 | 2.584799e-194 | -8.615850e-47 |
| Msa1207430 | Msa1257610 | 0.988434 | 5.277064e-174 | -8.615850e-47 |
| Msa1207920 | Msa1257610 | -0.804326 | 2.278881e-49 | -8.615850e-47 |
| Msa0905570 | Msa1257610 | 0.801475 | 8.846674e-49 | -8.615850e-47 |
| Msa0946330 | Msa1257610 | 0.801838 | 7.453090e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257610 | MtrunA17_Chr4g0056271 | 68.242 | 677 | 142 | 8 | 1 | 609 | 83 | 754 | 0.0 | 861 |
| Msa1257610 | MtrunA17_Chr4g0056281 | 74.162 | 507 | 66 | 4 | 1 | 442 | 85 | 591 | 0.0 | 712 |
| Msa1257610 | MtrunA17_Chr4g0056291 | 93.220 | 59 | 4 | 0 | 551 | 609 | 1 | 59 | 4.61e-33 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257610 | AT5G47580.1 | 37.750 | 649 | 335 | 9 | 1 | 582 | 83 | 729 | 9.07e-131 | 401 |
| Msa1257610 | AT4G17250.1 | 36.986 | 657 | 333 | 14 | 1 | 584 | 80 | 728 | 1.81e-117 | 366 |
| Msa1257610 | AT4G17250.3 | 43.516 | 455 | 245 | 6 | 136 | 584 | 181 | 629 | 2.79e-117 | 363 |
| Msa1257610 | AT4G17250.2 | 37.455 | 550 | 270 | 12 | 1 | 481 | 80 | 624 | 5.01e-95 | 305 |
Find 108 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACGCTATATCTGTTAA+AGG | 0.163957 | 8_2:+58246396 | Msa1257610:CDS |
| TTGGATGCCAATACTTTAAT+AGG | 0.211350 | 8_2:-58246237 | None:intergenic |
| TCAATGTTGCATGGATTTAA+AGG | 0.244994 | 8_2:+58245796 | Msa1257610:CDS |
| AACAATTCAATAACAAGTTT+TGG | 0.257554 | 8_2:-58245760 | None:intergenic |
| ATATTATCTTGTGTGTATTA+AGG | 0.259802 | 8_2:+58246197 | Msa1257610:CDS |
| AATGGTACAGATTCGGGTTT+AGG | 0.260859 | 8_2:+58245607 | Msa1257610:CDS |
| TCCATGTAATGTTTCATCTT+TGG | 0.271186 | 8_2:-58244929 | None:intergenic |
| GAGATGAATTGTTGAAATTC+TGG | 0.271539 | 8_2:+58245038 | Msa1257610:CDS |
| AGGCAAATGTCCCTCAATTT+AGG | 0.283800 | 8_2:-58246645 | None:intergenic |
| TAATGTCTCAAGTGTCTCTT+TGG | 0.302092 | 8_2:-58246133 | None:intergenic |
| AAATTCAATGGTACAGATTC+GGG | 0.312280 | 8_2:+58245601 | Msa1257610:CDS |
| TGAAACCATGTTGAATGTTT+TGG | 0.313595 | 8_2:+58244757 | Msa1257610:CDS |
| TTTGTGAGTATTTCAAGAAT+TGG | 0.319604 | 8_2:+58245572 | Msa1257610:CDS |
| GTTATGATTGCTGATATATT+AGG | 0.327555 | 8_2:+58246354 | Msa1257610:CDS |
| AAAATTCAATGGTACAGATT+CGG | 0.346213 | 8_2:+58245600 | Msa1257610:CDS |
| ATTTGTATACAGTTTGTAAC+TGG | 0.348616 | 8_2:+58244815 | Msa1257610:CDS |
| TTACCCTATGCGGTGGATCT+TGG | 0.348786 | 8_2:+58245546 | Msa1257610:CDS |
| TACCCTATGCGGTGGATCTT+GGG | 0.363258 | 8_2:+58245547 | Msa1257610:CDS |
| CCGCGGCAACAATCCACTTT+AGG | 0.374074 | 8_2:-58246522 | None:intergenic |
| TGCTTTAATTTGCACTATCA+TGG | 0.383099 | 8_2:+58244697 | Msa1257610:CDS |
| ACAGCCTCTCACGAGTATTA+TGG | 0.398293 | 8_2:-58246317 | None:intergenic |
| TTGCATGGATTTAAAGGAGT+TGG | 0.399932 | 8_2:+58245802 | Msa1257610:CDS |
| GGATTGGTAACCGGTGGTTT+AGG | 0.400590 | 8_2:+58245425 | Msa1257610:CDS |
| AAAGAGAGCCTTTCCTAAAG+TGG | 0.408572 | 8_2:+58246509 | Msa1257610:CDS |
| TGGCATGGAGCTGATCTCTA+TGG | 0.410840 | 8_2:+58246060 | Msa1257610:CDS |
| TTACCAATCCGAAAACTAAT+CGG | 0.413192 | 8_2:-58245412 | None:intergenic |
| GCTAATTCCATGCCTTCTCT+TGG | 0.416271 | 8_2:+58244719 | Msa1257610:CDS |
| ATAGGAAGTGACCAACTATA+TGG | 0.422490 | 8_2:-58245871 | None:intergenic |
| GTTTAATGCTTAAGCAAAAC+AGG | 0.422568 | 8_2:+58246565 | Msa1257610:CDS |
| ATGCTTGCTAGTGTAACAAT+AGG | 0.433859 | 8_2:-58245889 | None:intergenic |
| ACAGATTCGGGTTTAGGAAC+AGG | 0.437251 | 8_2:+58245613 | Msa1257610:CDS |
| GGTGTCCAAATGTGAGGAAA+AGG | 0.448572 | 8_2:+58245323 | Msa1257610:CDS |
| ATTGTGATGCAACTACTCAT+TGG | 0.449727 | 8_2:+58245713 | Msa1257610:CDS |
| TAACCGGTGGTTTAGGAAGT+TGG | 0.452691 | 8_2:+58245432 | Msa1257610:CDS |
| AGCATGGCCTATTAAAGTAT+TGG | 0.452708 | 8_2:+58246230 | Msa1257610:CDS |
| GCTTATTCTGTACATTGCAT+TGG | 0.454548 | 8_2:-58246256 | None:intergenic |
| CCTAGATATTGACTAAAAGC+TGG | 0.466905 | 8_2:+58246665 | Msa1257610:exon |
| AGAGAAGCAGTTTATGTGCT+TGG | 0.467580 | 8_2:+58246456 | Msa1257610:CDS |
| TCCAAATGTGGAAAAGTGTT+TGG | 0.472475 | 8_2:+58245924 | Msa1257610:CDS |
| GACCGAATTCTTCCTTTGCA+TGG | 0.473735 | 8_2:+58245838 | Msa1257610:CDS |
| CTCCAGTGATGATAGTATAG+AGG | 0.477229 | 8_2:-58246598 | None:intergenic |
| GCATGGCTCCTCCTAAATTG+AGG | 0.479692 | 8_2:+58246634 | Msa1257610:CDS |
| ATCTTGATTCAACAGAAGAA+TGG | 0.480699 | 8_2:-58246283 | None:intergenic |
| CATGGCTCCTCCTAAATTGA+GGG | 0.481009 | 8_2:+58246635 | Msa1257610:CDS |
| CACCATGCAAAGGAAGAATT+CGG | 0.481803 | 8_2:-58245840 | None:intergenic |
| TTTCTGTATTAAACTACAGA+TGG | 0.484663 | 8_2:+58245483 | Msa1257610:CDS |
| GAATAGTGCTATTGAAGAGA+GGG | 0.485535 | 8_2:+58246422 | Msa1257610:CDS |
| GAAAATAACATTGACAAAGA+AGG | 0.485570 | 8_2:+58246000 | Msa1257610:CDS |
| TTACTGGACTGATAGTTTAG+TGG | 0.485603 | 8_2:+58245375 | Msa1257610:CDS |
| GGTTTGCTGCTGTTAAATAT+AGG | 0.487367 | 8_2:+58245302 | Msa1257610:CDS |
| ATAGTTCAAGTTGCTGCTGT+TGG | 0.491201 | 8_2:+58245250 | Msa1257610:intron |
| ACATCTGAAATTGTTTGGCA+TGG | 0.494574 | 8_2:+58246045 | Msa1257610:CDS |
| TGAATAGTGCTATTGAAGAG+AGG | 0.495189 | 8_2:+58246421 | Msa1257610:CDS |
| AATTGGAAATCAAAATTCAA+TGG | 0.495406 | 8_2:+58245589 | Msa1257610:CDS |
| CAAGTTGCTGCTGTTGGCGT+TGG | 0.498230 | 8_2:+58245256 | Msa1257610:CDS |
| TTGTGATGCAACTACTCATT+GGG | 0.503945 | 8_2:+58245714 | Msa1257610:CDS |
| ATCCCAAGATCCACCGCATA+GGG | 0.509363 | 8_2:-58245549 | None:intergenic |
| ATTGTTGAAATTCTGGATGA+TGG | 0.511008 | 8_2:+58245045 | Msa1257610:CDS |
| TATAGTTGCACTTCCAAATG+TGG | 0.517480 | 8_2:+58245912 | Msa1257610:CDS |
| AAAATAACATTGACAAAGAA+GGG | 0.520371 | 8_2:+58246001 | Msa1257610:CDS |
| TCCCTCTATACTATCATCAC+TGG | 0.526334 | 8_2:+58246596 | Msa1257610:CDS |
| GCAGAAGGCAGGACCTAAAA+CGG | 0.527369 | 8_2:+58245635 | Msa1257610:CDS |
| TAGTGCTATTGAAGAGAGGG+AGG | 0.527847 | 8_2:+58246425 | Msa1257610:CDS |
| TGATCATGACGGTGAGGCAT+AGG | 0.532938 | 8_2:-58244653 | None:intergenic |
| GCGGGACTAACATCGAAGAT+TGG | 0.534187 | 8_2:+58246541 | Msa1257610:CDS |
| TTCTGTATTAAACTACAGAT+GGG | 0.537735 | 8_2:+58245484 | Msa1257610:CDS |
| GTGAGGAAAAGGAGTAGCAA+GGG | 0.538430 | 8_2:+58245334 | Msa1257610:CDS |
| ACCAAAGATGAAACATTACA+TGG | 0.541625 | 8_2:+58244928 | Msa1257610:CDS |
| GTGTAGAACCTCCATATAGT+TGG | 0.552822 | 8_2:+58245860 | Msa1257610:CDS |
| AGGTGAGGAAGAGTTGGTTG+AGG | 0.553378 | 8_2:+58245675 | Msa1257610:CDS |
| AATCCCAAGATCCACCGCAT+AGG | 0.553870 | 8_2:-58245550 | None:intergenic |
| CCTAAAGTGGATTGTTGCCG+CGG | 0.561298 | 8_2:+58246522 | Msa1257610:CDS |
| AATGTCTCAAGTGTCTCTTT+GGG | 0.563830 | 8_2:-58246132 | None:intergenic |
| CGGGTTTAGGAACAGGCAGA+AGG | 0.567799 | 8_2:+58245620 | Msa1257610:CDS |
| CGGTTTATTCTGCATCTCGA+AGG | 0.569485 | 8_2:+58245655 | Msa1257610:CDS |
| TTTAGGAACAGGCAGAAGGC+AGG | 0.571095 | 8_2:+58245624 | Msa1257610:CDS |
| CTAAAGTGGATTGTTGCCGC+GGG | 0.575399 | 8_2:+58246523 | Msa1257610:CDS |
| TGTGACACCAAGAGAAGGCA+TGG | 0.576519 | 8_2:-58244726 | None:intergenic |
| TCTCGAAGGTGAGGAAGAGT+TGG | 0.577120 | 8_2:+58245669 | Msa1257610:CDS |
| TCCAGTGATGATAGTATAGA+GGG | 0.580375 | 8_2:-58246597 | None:intergenic |
| GCAACAATCCACTTTAGGAA+AGG | 0.581142 | 8_2:-58246517 | None:intergenic |
| GAGCTGATCTCTATGGAAAG+TGG | 0.582667 | 8_2:+58246067 | Msa1257610:CDS |
| GCAGCAAACCACCTAAAAGC+AGG | 0.583806 | 8_2:-58245289 | None:intergenic |
| TTTCGATTTACCCTATGCGG+TGG | 0.586710 | 8_2:+58245539 | Msa1257610:CDS |
| TTCTGTGTGACACCAAGAGA+AGG | 0.606691 | 8_2:-58244731 | None:intergenic |
| TTGTTTCGATTTACCCTATG+CGG | 0.611581 | 8_2:+58245536 | Msa1257610:CDS |
| CAAATGTCCCTCAATTTAGG+AGG | 0.613143 | 8_2:-58246642 | None:intergenic |
| ACTACTCATTGGGTTGAACA+AGG | 0.615223 | 8_2:+58245724 | Msa1257610:CDS |
| AATATAGGTGTCCAAATGTG+AGG | 0.619576 | 8_2:+58245317 | Msa1257610:CDS |
| GAGCCAACTTCCTAAACCAC+CGG | 0.620931 | 8_2:-58245435 | None:intergenic |
| TATTCTGCATCTCGAAGGTG+AGG | 0.624822 | 8_2:+58245660 | Msa1257610:CDS |
| CATAGCCAAAACATTCAACA+TGG | 0.624825 | 8_2:-58244762 | None:intergenic |
| TATTAAACTACAGATGGGGA+TGG | 0.629487 | 8_2:+58245489 | Msa1257610:CDS |
| CTCTATACTATCATCACTGG+AGG | 0.632764 | 8_2:+58246599 | Msa1257610:CDS |
| TGTGAGGAAAAGGAGTAGCA+AGG | 0.636275 | 8_2:+58245333 | Msa1257610:CDS |
| GGAGGAGAATGACATTTGCA+TGG | 0.636716 | 8_2:+58246617 | Msa1257610:CDS |
| GGAGGTTCTACACCATGCAA+AGG | 0.640891 | 8_2:-58245850 | None:intergenic |
| ACTTTAATAGGCCATGCTGA+AGG | 0.649984 | 8_2:-58246225 | None:intergenic |
| TCTGTATTAAACTACAGATG+GGG | 0.654899 | 8_2:+58245485 | Msa1257610:CDS |
| GCTTTGCTAGCTGATCATGA+CGG | 0.671296 | 8_2:-58244664 | None:intergenic |
| AAGACCATAATACTCGTGAG+AGG | 0.671965 | 8_2:+58246313 | Msa1257610:CDS |
| GGAAGTGACCAACTATATGG+AGG | 0.678302 | 8_2:-58245868 | None:intergenic |
| AATCTTCGATGTTAGTCCCG+CGG | 0.679064 | 8_2:-58246539 | None:intergenic |
| AGATATTGACTAAAAGCTGG+AGG | 0.679125 | 8_2:+58246668 | Msa1257610:exon |
| TTAAGGTAAGTCCTTCAGCA+TGG | 0.681137 | 8_2:+58246214 | Msa1257610:CDS |
| TGGATGATGGCTCATACTAG+CGG | 0.682855 | 8_2:+58245058 | Msa1257610:CDS |
| CCTTTAACAGATATAGCGTG+TGG | 0.685524 | 8_2:-58246396 | None:intergenic |
| GCTAGCTGATCATGACGGTG+AGG | 0.686156 | 8_2:-58244659 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGGAAATCAAAATTCAA+TGG | + | chr8_2:58245589-58245608 | Msa1257610:CDS | 20.0% |
| !!! | AACAATTCAATAACAAGTTT+TGG | - | chr8_2:58245763-58245782 | None:intergenic | 20.0% |
| !! | AAAATAACATTGACAAAGAA+GGG | + | chr8_2:58246001-58246020 | Msa1257610:CDS | 20.0% |
| !! | ATATTATCTTGTGTGTATTA+AGG | + | chr8_2:58246197-58246216 | Msa1257610:CDS | 20.0% |
| !! | AATTGGAAATCAAAATTCAA+TGG | + | chr8_2:58245589-58245608 | Msa1257610:CDS | 20.0% |
| !!! | AACAATTCAATAACAAGTTT+TGG | - | chr8_2:58245763-58245782 | None:intergenic | 20.0% |
| !! | AAAATAACATTGACAAAGAA+GGG | + | chr8_2:58246001-58246020 | Msa1257610:CDS | 20.0% |
| !! | ATATTATCTTGTGTGTATTA+AGG | + | chr8_2:58246197-58246216 | Msa1257610:CDS | 20.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | + | chr8_2:58244815-58244834 | Msa1257610:CDS | 25.0% |
| ! | TTTCTGTATTAAACTACAGA+TGG | + | chr8_2:58245483-58245502 | Msa1257610:CDS | 25.0% |
| ! | TTCTGTATTAAACTACAGAT+GGG | + | chr8_2:58245484-58245503 | Msa1257610:CDS | 25.0% |
| ! | TTTGTGAGTATTTCAAGAAT+TGG | + | chr8_2:58245572-58245591 | Msa1257610:CDS | 25.0% |
| ! | AAAATTCAATGGTACAGATT+CGG | + | chr8_2:58245600-58245619 | Msa1257610:CDS | 25.0% |
| ! | AAAAAATGTTCAATGTTGCA+TGG | + | chr8_2:58245787-58245806 | Msa1257610:CDS | 25.0% |
| !! | GTTTGGTGAAAAATTTGATT+AGG | + | chr8_2:58245941-58245960 | Msa1257610:CDS | 25.0% |
| !! | TTTTCGATGAAATTCACATA+AGG | - | chr8_2:58245985-58246004 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+AGG | + | chr8_2:58246000-58246019 | Msa1257610:CDS | 25.0% |
| !! | GAAAAACATCTGAAATTGTT+TGG | + | chr8_2:58246040-58246059 | Msa1257610:CDS | 25.0% |
| ! | GTTATGATTGCTGATATATT+AGG | + | chr8_2:58246354-58246373 | Msa1257610:CDS | 25.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | + | chr8_2:58244815-58244834 | Msa1257610:CDS | 25.0% |
| ! | TTTCTGTATTAAACTACAGA+TGG | + | chr8_2:58245483-58245502 | Msa1257610:CDS | 25.0% |
| ! | TTCTGTATTAAACTACAGAT+GGG | + | chr8_2:58245484-58245503 | Msa1257610:CDS | 25.0% |
| ! | TTTGTGAGTATTTCAAGAAT+TGG | + | chr8_2:58245572-58245591 | Msa1257610:CDS | 25.0% |
| ! | AAAATTCAATGGTACAGATT+CGG | + | chr8_2:58245600-58245619 | Msa1257610:CDS | 25.0% |
| ! | AAAAAATGTTCAATGTTGCA+TGG | + | chr8_2:58245787-58245806 | Msa1257610:CDS | 25.0% |
| !! | GTTTGGTGAAAAATTTGATT+AGG | + | chr8_2:58245941-58245960 | Msa1257610:CDS | 25.0% |
| !! | TTTTCGATGAAATTCACATA+AGG | - | chr8_2:58245985-58246004 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+AGG | + | chr8_2:58246000-58246019 | Msa1257610:CDS | 25.0% |
| !! | GAAAAACATCTGAAATTGTT+TGG | + | chr8_2:58246040-58246059 | Msa1257610:CDS | 25.0% |
| ! | GTTATGATTGCTGATATATT+AGG | + | chr8_2:58246354-58246373 | Msa1257610:CDS | 25.0% |
| !! | TGCTTTAATTTGCACTATCA+TGG | + | chr8_2:58244697-58244716 | Msa1257610:CDS | 30.0% |
| ! | TGAAACCATGTTGAATGTTT+TGG | + | chr8_2:58244757-58244776 | Msa1257610:CDS | 30.0% |
| !!! | CTGGTGTTATTTATGAGTTT+TGG | + | chr8_2:58244834-58244853 | Msa1257610:intron | 30.0% |
| ACCAAAGATGAAACATTACA+TGG | + | chr8_2:58244928-58244947 | Msa1257610:CDS | 30.0% | |
| TCCATGTAATGTTTCATCTT+TGG | - | chr8_2:58244932-58244951 | None:intergenic | 30.0% | |
| TTACATGGAGTTGAAGTATA+AGG | + | chr8_2:58244943-58244962 | Msa1257610:intron | 30.0% | |
| GAGATGAATTGTTGAAATTC+TGG | + | chr8_2:58245038-58245057 | Msa1257610:CDS | 30.0% | |
| ATTGTTGAAATTCTGGATGA+TGG | + | chr8_2:58245045-58245064 | Msa1257610:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | + | chr8_2:58245170-58245189 | Msa1257610:intron | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | + | chr8_2:58245174-58245193 | Msa1257610:intron | 30.0% |
| !!! | AAGGGAATTTTTCAAGTAGA+AGG | + | chr8_2:58245352-58245371 | Msa1257610:CDS | 30.0% |
| !!! | TTTTTCAAGTAGAAGGTTAC+TGG | + | chr8_2:58245359-58245378 | Msa1257610:CDS | 30.0% |
| TTACCAATCCGAAAACTAAT+CGG | - | chr8_2:58245415-58245434 | None:intergenic | 30.0% | |
| TCTGTATTAAACTACAGATG+GGG | + | chr8_2:58245485-58245504 | Msa1257610:CDS | 30.0% | |
| AAATTCAATGGTACAGATTC+GGG | + | chr8_2:58245601-58245620 | Msa1257610:CDS | 30.0% | |
| TCAATGTTGCATGGATTTAA+AGG | + | chr8_2:58245796-58245815 | Msa1257610:CDS | 30.0% | |
| TTGGATGCCAATACTTTAAT+AGG | - | chr8_2:58246240-58246259 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | - | chr8_2:58246286-58246305 | None:intergenic | 30.0% | |
| GTTTAATGCTTAAGCAAAAC+AGG | + | chr8_2:58246565-58246584 | Msa1257610:CDS | 30.0% | |
| !! | TGCTTTAATTTGCACTATCA+TGG | + | chr8_2:58244697-58244716 | Msa1257610:CDS | 30.0% |
| ! | TGAAACCATGTTGAATGTTT+TGG | + | chr8_2:58244757-58244776 | Msa1257610:CDS | 30.0% |
| !!! | CTGGTGTTATTTATGAGTTT+TGG | + | chr8_2:58244834-58244853 | Msa1257610:intron | 30.0% |
| ACCAAAGATGAAACATTACA+TGG | + | chr8_2:58244928-58244947 | Msa1257610:CDS | 30.0% | |
| TCCATGTAATGTTTCATCTT+TGG | - | chr8_2:58244932-58244951 | None:intergenic | 30.0% | |
| TTACATGGAGTTGAAGTATA+AGG | + | chr8_2:58244943-58244962 | Msa1257610:intron | 30.0% | |
| GAGATGAATTGTTGAAATTC+TGG | + | chr8_2:58245038-58245057 | Msa1257610:CDS | 30.0% | |
| ATTGTTGAAATTCTGGATGA+TGG | + | chr8_2:58245045-58245064 | Msa1257610:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | + | chr8_2:58245170-58245189 | Msa1257610:intron | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | + | chr8_2:58245174-58245193 | Msa1257610:intron | 30.0% |
| !!! | AAGGGAATTTTTCAAGTAGA+AGG | + | chr8_2:58245352-58245371 | Msa1257610:CDS | 30.0% |
| !!! | TTTTTCAAGTAGAAGGTTAC+TGG | + | chr8_2:58245359-58245378 | Msa1257610:CDS | 30.0% |
| TTACCAATCCGAAAACTAAT+CGG | - | chr8_2:58245415-58245434 | None:intergenic | 30.0% | |
| TCTGTATTAAACTACAGATG+GGG | + | chr8_2:58245485-58245504 | Msa1257610:CDS | 30.0% | |
| AAATTCAATGGTACAGATTC+GGG | + | chr8_2:58245601-58245620 | Msa1257610:CDS | 30.0% | |
| TCAATGTTGCATGGATTTAA+AGG | + | chr8_2:58245796-58245815 | Msa1257610:CDS | 30.0% | |
| TTGGATGCCAATACTTTAAT+AGG | - | chr8_2:58246240-58246259 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | - | chr8_2:58246286-58246305 | None:intergenic | 30.0% | |
| GTTTAATGCTTAAGCAAAAC+AGG | + | chr8_2:58246565-58246584 | Msa1257610:CDS | 30.0% | |
| CATAGCCAAAACATTCAACA+TGG | - | chr8_2:58244765-58244784 | None:intergenic | 35.0% | |
| !!! | CATGTTGAATGTTTTGGCTA+TGG | + | chr8_2:58244763-58244782 | Msa1257610:CDS | 35.0% |
| !!! | TATGAGTTTTGGATCGAACA+TGG | + | chr8_2:58244845-58244864 | Msa1257610:intron | 35.0% |
| CTGGTGATTGTGATTACAAA+TGG | + | chr8_2:58245209-58245228 | Msa1257610:intron | 35.0% | |
| !! | GGTTTGCTGCTGTTAAATAT+AGG | + | chr8_2:58245302-58245321 | Msa1257610:CDS | 35.0% |
| AATATAGGTGTCCAAATGTG+AGG | + | chr8_2:58245317-58245336 | Msa1257610:CDS | 35.0% | |
| TTACTGGACTGATAGTTTAG+TGG | + | chr8_2:58245375-58245394 | Msa1257610:CDS | 35.0% | |
| !!! | TTAGTTTTCGGATTGGTAAC+CGG | + | chr8_2:58245416-58245435 | Msa1257610:CDS | 35.0% |
| TATTAAACTACAGATGGGGA+TGG | + | chr8_2:58245489-58245508 | Msa1257610:CDS | 35.0% | |
| TTGTTTCGATTTACCCTATG+CGG | + | chr8_2:58245536-58245555 | Msa1257610:CDS | 35.0% | |
| ! | GATGCAGAATAAACCGTTTT+AGG | - | chr8_2:58245651-58245670 | None:intergenic | 35.0% |
| ATTGTGATGCAACTACTCAT+TGG | + | chr8_2:58245713-58245732 | Msa1257610:CDS | 35.0% | |
| TTGTGATGCAACTACTCATT+GGG | + | chr8_2:58245714-58245733 | Msa1257610:CDS | 35.0% | |
| TTGCATGGATTTAAAGGAGT+TGG | + | chr8_2:58245802-58245821 | Msa1257610:CDS | 35.0% | |
| ATAGGAAGTGACCAACTATA+TGG | - | chr8_2:58245874-58245893 | None:intergenic | 35.0% | |
| ! | ATGCTTGCTAGTGTAACAAT+AGG | - | chr8_2:58245892-58245911 | None:intergenic | 35.0% |
| TATAGTTGCACTTCCAAATG+TGG | + | chr8_2:58245912-58245931 | Msa1257610:CDS | 35.0% | |
| !! | TCCAAATGTGGAAAAGTGTT+TGG | + | chr8_2:58245924-58245943 | Msa1257610:CDS | 35.0% |
| ! | ACCAAACACTTTTCCACATT+TGG | - | chr8_2:58245928-58245947 | None:intergenic | 35.0% |
| ! | ACATCTGAAATTGTTTGGCA+TGG | + | chr8_2:58246045-58246064 | Msa1257610:CDS | 35.0% |
| !!! | TTTGGGAGTCTTGTTTTGAA+GGG | - | chr8_2:58246118-58246137 | None:intergenic | 35.0% |
| AATGTCTCAAGTGTCTCTTT+GGG | - | chr8_2:58246135-58246154 | None:intergenic | 35.0% | |
| TAATGTCTCAAGTGTCTCTT+TGG | - | chr8_2:58246136-58246155 | None:intergenic | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | + | chr8_2:58246154-58246173 | Msa1257610:CDS | 35.0% | |
| AGCATGGCCTATTAAAGTAT+TGG | + | chr8_2:58246230-58246249 | Msa1257610:CDS | 35.0% | |
| GCTTATTCTGTACATTGCAT+TGG | - | chr8_2:58246259-58246278 | None:intergenic | 35.0% | |
| ! | TGAATAGTGCTATTGAAGAG+AGG | + | chr8_2:58246421-58246440 | Msa1257610:CDS | 35.0% |
| ! | GAATAGTGCTATTGAAGAGA+GGG | + | chr8_2:58246422-58246441 | Msa1257610:CDS | 35.0% |
| TCCAGTGATGATAGTATAGA+GGG | - | chr8_2:58246600-58246619 | None:intergenic | 35.0% | |
| ! | CCAGCTTTTAGTCAATATCT+AGG | - | chr8_2:58246668-58246687 | None:intergenic | 35.0% |
| ! | CCTAGATATTGACTAAAAGC+TGG | + | chr8_2:58246665-58246684 | Msa1257610:exon | 35.0% |
| ! | AGATATTGACTAAAAGCTGG+AGG | + | chr8_2:58246668-58246687 | Msa1257610:exon | 35.0% |
| CATAGCCAAAACATTCAACA+TGG | - | chr8_2:58244765-58244784 | None:intergenic | 35.0% | |
| !!! | CATGTTGAATGTTTTGGCTA+TGG | + | chr8_2:58244763-58244782 | Msa1257610:CDS | 35.0% |
| !!! | TATGAGTTTTGGATCGAACA+TGG | + | chr8_2:58244845-58244864 | Msa1257610:intron | 35.0% |
| CTGGTGATTGTGATTACAAA+TGG | + | chr8_2:58245209-58245228 | Msa1257610:intron | 35.0% | |
| !! | GGTTTGCTGCTGTTAAATAT+AGG | + | chr8_2:58245302-58245321 | Msa1257610:CDS | 35.0% |
| AATATAGGTGTCCAAATGTG+AGG | + | chr8_2:58245317-58245336 | Msa1257610:CDS | 35.0% | |
| TTACTGGACTGATAGTTTAG+TGG | + | chr8_2:58245375-58245394 | Msa1257610:CDS | 35.0% | |
| !!! | TTAGTTTTCGGATTGGTAAC+CGG | + | chr8_2:58245416-58245435 | Msa1257610:CDS | 35.0% |
| TATTAAACTACAGATGGGGA+TGG | + | chr8_2:58245489-58245508 | Msa1257610:CDS | 35.0% | |
| TTGTTTCGATTTACCCTATG+CGG | + | chr8_2:58245536-58245555 | Msa1257610:CDS | 35.0% | |
| ! | GATGCAGAATAAACCGTTTT+AGG | - | chr8_2:58245651-58245670 | None:intergenic | 35.0% |
| ATTGTGATGCAACTACTCAT+TGG | + | chr8_2:58245713-58245732 | Msa1257610:CDS | 35.0% | |
| TTGTGATGCAACTACTCATT+GGG | + | chr8_2:58245714-58245733 | Msa1257610:CDS | 35.0% | |
| TTGCATGGATTTAAAGGAGT+TGG | + | chr8_2:58245802-58245821 | Msa1257610:CDS | 35.0% | |
| ATAGGAAGTGACCAACTATA+TGG | - | chr8_2:58245874-58245893 | None:intergenic | 35.0% | |
| ! | ATGCTTGCTAGTGTAACAAT+AGG | - | chr8_2:58245892-58245911 | None:intergenic | 35.0% |
| TATAGTTGCACTTCCAAATG+TGG | + | chr8_2:58245912-58245931 | Msa1257610:CDS | 35.0% | |
| !! | TCCAAATGTGGAAAAGTGTT+TGG | + | chr8_2:58245924-58245943 | Msa1257610:CDS | 35.0% |
| ! | ACCAAACACTTTTCCACATT+TGG | - | chr8_2:58245928-58245947 | None:intergenic | 35.0% |
| ! | ACATCTGAAATTGTTTGGCA+TGG | + | chr8_2:58246045-58246064 | Msa1257610:CDS | 35.0% |
| !!! | TTTGGGAGTCTTGTTTTGAA+GGG | - | chr8_2:58246118-58246137 | None:intergenic | 35.0% |
| AATGTCTCAAGTGTCTCTTT+GGG | - | chr8_2:58246135-58246154 | None:intergenic | 35.0% | |
| TAATGTCTCAAGTGTCTCTT+TGG | - | chr8_2:58246136-58246155 | None:intergenic | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | + | chr8_2:58246154-58246173 | Msa1257610:CDS | 35.0% | |
| AGCATGGCCTATTAAAGTAT+TGG | + | chr8_2:58246230-58246249 | Msa1257610:CDS | 35.0% | |
| GCTTATTCTGTACATTGCAT+TGG | - | chr8_2:58246259-58246278 | None:intergenic | 35.0% | |
| ! | TGAATAGTGCTATTGAAGAG+AGG | + | chr8_2:58246421-58246440 | Msa1257610:CDS | 35.0% |
| ! | GAATAGTGCTATTGAAGAGA+GGG | + | chr8_2:58246422-58246441 | Msa1257610:CDS | 35.0% |
| TCCAGTGATGATAGTATAGA+GGG | - | chr8_2:58246600-58246619 | None:intergenic | 35.0% | |
| ! | CCAGCTTTTAGTCAATATCT+AGG | - | chr8_2:58246668-58246687 | None:intergenic | 35.0% |
| ! | CCTAGATATTGACTAAAAGC+TGG | + | chr8_2:58246665-58246684 | Msa1257610:exon | 35.0% |
| ! | AGATATTGACTAAAAGCTGG+AGG | + | chr8_2:58246668-58246687 | Msa1257610:exon | 35.0% |
| GTCCTCAATTTCTACTTGGA+AGG | + | chr8_2:58245080-58245099 | Msa1257610:intron | 40.0% | |
| GACCTTCCAAGTAGAAATTG+AGG | - | chr8_2:58245085-58245104 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | + | chr8_2:58245103-58245122 | Msa1257610:intron | 40.0% | |
| ! | TGGTCGGTTAAATTTTGTGC+TGG | + | chr8_2:58245190-58245209 | Msa1257610:intron | 40.0% |
| !! | ATAGTTCAAGTTGCTGCTGT+TGG | + | chr8_2:58245250-58245269 | Msa1257610:intron | 40.0% |
| !! | GTACTATTGCTCCTGCTTTT+AGG | + | chr8_2:58245278-58245297 | Msa1257610:CDS | 40.0% |
| ! | CTACTCCTTTTCCTCACATT+TGG | - | chr8_2:58245331-58245350 | None:intergenic | 40.0% |
| !!! | GAGAGAGTCCGATTAGTTTT+CGG | + | chr8_2:58245404-58245423 | Msa1257610:CDS | 40.0% |
| !!! | AGTCCGATTAGTTTTCGGAT+TGG | + | chr8_2:58245409-58245428 | Msa1257610:CDS | 40.0% |
| ! | AATGGTACAGATTCGGGTTT+AGG | + | chr8_2:58245607-58245626 | Msa1257610:CDS | 40.0% |
| !! | ACTACTCATTGGGTTGAACA+AGG | + | chr8_2:58245724-58245743 | Msa1257610:CDS | 40.0% |
| CACCATGCAAAGGAAGAATT+CGG | - | chr8_2:58245843-58245862 | None:intergenic | 40.0% | |
| GTGTAGAACCTCCATATAGT+TGG | + | chr8_2:58245860-58245879 | Msa1257610:CDS | 40.0% | |
| !!! | CTTTGGGAGTCTTGTTTTGA+AGG | - | chr8_2:58246119-58246138 | None:intergenic | 40.0% |
| TTAAGGTAAGTCCTTCAGCA+TGG | + | chr8_2:58246214-58246233 | Msa1257610:CDS | 40.0% | |
| ACTTTAATAGGCCATGCTGA+AGG | - | chr8_2:58246228-58246247 | None:intergenic | 40.0% | |
| AAGACCATAATACTCGTGAG+AGG | + | chr8_2:58246313-58246332 | Msa1257610:CDS | 40.0% | |
| CCTTTAACAGATATAGCGTG+TGG | - | chr8_2:58246399-58246418 | None:intergenic | 40.0% | |
| CCACACGCTATATCTGTTAA+AGG | + | chr8_2:58246396-58246415 | Msa1257610:CDS | 40.0% | |
| AGAGAAGCAGTTTATGTGCT+TGG | + | chr8_2:58246456-58246475 | Msa1257610:CDS | 40.0% | |
| AAAGAGAGCCTTTCCTAAAG+TGG | + | chr8_2:58246509-58246528 | Msa1257610:CDS | 40.0% | |
| ! | GCAACAATCCACTTTAGGAA+AGG | - | chr8_2:58246520-58246539 | None:intergenic | 40.0% |
| TCCCTCTATACTATCATCAC+TGG | + | chr8_2:58246596-58246615 | Msa1257610:CDS | 40.0% | |
| CTCCAGTGATGATAGTATAG+AGG | - | chr8_2:58246601-58246620 | None:intergenic | 40.0% | |
| CTCTATACTATCATCACTGG+AGG | + | chr8_2:58246599-58246618 | Msa1257610:CDS | 40.0% | |
| CAAATGTCCCTCAATTTAGG+AGG | - | chr8_2:58246645-58246664 | None:intergenic | 40.0% | |
| AGGCAAATGTCCCTCAATTT+AGG | - | chr8_2:58246648-58246667 | None:intergenic | 40.0% | |
| GTCCTCAATTTCTACTTGGA+AGG | + | chr8_2:58245080-58245099 | Msa1257610:intron | 40.0% | |
| GACCTTCCAAGTAGAAATTG+AGG | - | chr8_2:58245085-58245104 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | + | chr8_2:58245103-58245122 | Msa1257610:intron | 40.0% | |
| ! | TGGTCGGTTAAATTTTGTGC+TGG | + | chr8_2:58245190-58245209 | Msa1257610:intron | 40.0% |
| !! | ATAGTTCAAGTTGCTGCTGT+TGG | + | chr8_2:58245250-58245269 | Msa1257610:intron | 40.0% |
| !! | GTACTATTGCTCCTGCTTTT+AGG | + | chr8_2:58245278-58245297 | Msa1257610:CDS | 40.0% |
| ! | CTACTCCTTTTCCTCACATT+TGG | - | chr8_2:58245331-58245350 | None:intergenic | 40.0% |
| !!! | GAGAGAGTCCGATTAGTTTT+CGG | + | chr8_2:58245404-58245423 | Msa1257610:CDS | 40.0% |
| !!! | AGTCCGATTAGTTTTCGGAT+TGG | + | chr8_2:58245409-58245428 | Msa1257610:CDS | 40.0% |
| ! | AATGGTACAGATTCGGGTTT+AGG | + | chr8_2:58245607-58245626 | Msa1257610:CDS | 40.0% |
| !! | ACTACTCATTGGGTTGAACA+AGG | + | chr8_2:58245724-58245743 | Msa1257610:CDS | 40.0% |
| CACCATGCAAAGGAAGAATT+CGG | - | chr8_2:58245843-58245862 | None:intergenic | 40.0% | |
| GTGTAGAACCTCCATATAGT+TGG | + | chr8_2:58245860-58245879 | Msa1257610:CDS | 40.0% | |
| !!! | CTTTGGGAGTCTTGTTTTGA+AGG | - | chr8_2:58246119-58246138 | None:intergenic | 40.0% |
| TTAAGGTAAGTCCTTCAGCA+TGG | + | chr8_2:58246214-58246233 | Msa1257610:CDS | 40.0% | |
| ACTTTAATAGGCCATGCTGA+AGG | - | chr8_2:58246228-58246247 | None:intergenic | 40.0% | |
| AAGACCATAATACTCGTGAG+AGG | + | chr8_2:58246313-58246332 | Msa1257610:CDS | 40.0% | |
| CCTTTAACAGATATAGCGTG+TGG | - | chr8_2:58246399-58246418 | None:intergenic | 40.0% | |
| CCACACGCTATATCTGTTAA+AGG | + | chr8_2:58246396-58246415 | Msa1257610:CDS | 40.0% | |
| AGAGAAGCAGTTTATGTGCT+TGG | + | chr8_2:58246456-58246475 | Msa1257610:CDS | 40.0% | |
| AAAGAGAGCCTTTCCTAAAG+TGG | + | chr8_2:58246509-58246528 | Msa1257610:CDS | 40.0% | |
| ! | GCAACAATCCACTTTAGGAA+AGG | - | chr8_2:58246520-58246539 | None:intergenic | 40.0% |
| TCCCTCTATACTATCATCAC+TGG | + | chr8_2:58246596-58246615 | Msa1257610:CDS | 40.0% | |
| CTCCAGTGATGATAGTATAG+AGG | - | chr8_2:58246601-58246620 | None:intergenic | 40.0% | |
| CTCTATACTATCATCACTGG+AGG | + | chr8_2:58246599-58246618 | Msa1257610:CDS | 40.0% | |
| CAAATGTCCCTCAATTTAGG+AGG | - | chr8_2:58246645-58246664 | None:intergenic | 40.0% | |
| AGGCAAATGTCCCTCAATTT+AGG | - | chr8_2:58246648-58246667 | None:intergenic | 40.0% | |
| GCTTTGCTAGCTGATCATGA+CGG | - | chr8_2:58244667-58244686 | None:intergenic | 45.0% | |
| GCTAATTCCATGCCTTCTCT+TGG | + | chr8_2:58244719-58244738 | Msa1257610:CDS | 45.0% | |
| TTCTGTGTGACACCAAGAGA+AGG | - | chr8_2:58244734-58244753 | None:intergenic | 45.0% | |
| ! | TGGATGATGGCTCATACTAG+CGG | + | chr8_2:58245058-58245077 | Msa1257610:CDS | 45.0% |
| AGCGGTCCTCAATTTCTACT+TGG | + | chr8_2:58245076-58245095 | Msa1257610:intron | 45.0% | |
| !! | CTATTGCTCCTGCTTTTAGG+TGG | + | chr8_2:58245281-58245300 | Msa1257610:CDS | 45.0% |
| GGTGTCCAAATGTGAGGAAA+AGG | + | chr8_2:58245323-58245342 | Msa1257610:CDS | 45.0% | |
| TGTGAGGAAAAGGAGTAGCA+AGG | + | chr8_2:58245333-58245352 | Msa1257610:CDS | 45.0% | |
| GTGAGGAAAAGGAGTAGCAA+GGG | + | chr8_2:58245334-58245353 | Msa1257610:CDS | 45.0% | |
| TAACCGGTGGTTTAGGAAGT+TGG | + | chr8_2:58245432-58245451 | Msa1257610:CDS | 45.0% | |
| TTTCGATTTACCCTATGCGG+TGG | + | chr8_2:58245539-58245558 | Msa1257610:CDS | 45.0% | |
| ! | ACAGATTCGGGTTTAGGAAC+AGG | + | chr8_2:58245613-58245632 | Msa1257610:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | + | chr8_2:58245655-58245674 | Msa1257610:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGTG+AGG | + | chr8_2:58245660-58245679 | Msa1257610:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | + | chr8_2:58245838-58245857 | Msa1257610:CDS | 45.0% | |
| GGAAGTGACCAACTATATGG+AGG | - | chr8_2:58245871-58245890 | None:intergenic | 45.0% | |
| GAGCTGATCTCTATGGAAAG+TGG | + | chr8_2:58246067-58246086 | Msa1257610:CDS | 45.0% | |
| ACAGCCTCTCACGAGTATTA+TGG | - | chr8_2:58246320-58246339 | None:intergenic | 45.0% | |
| ! | TAGTGCTATTGAAGAGAGGG+AGG | + | chr8_2:58246425-58246444 | Msa1257610:CDS | 45.0% |
| AATCTTCGATGTTAGTCCCG+CGG | - | chr8_2:58246542-58246561 | None:intergenic | 45.0% | |
| GGAGGAGAATGACATTTGCA+TGG | + | chr8_2:58246617-58246636 | Msa1257610:CDS | 45.0% | |
| CATGGCTCCTCCTAAATTGA+GGG | + | chr8_2:58246635-58246654 | Msa1257610:CDS | 45.0% | |
| GCTTTGCTAGCTGATCATGA+CGG | - | chr8_2:58244667-58244686 | None:intergenic | 45.0% | |
| GCTAATTCCATGCCTTCTCT+TGG | + | chr8_2:58244719-58244738 | Msa1257610:CDS | 45.0% | |
| TTCTGTGTGACACCAAGAGA+AGG | - | chr8_2:58244734-58244753 | None:intergenic | 45.0% | |
| ! | TGGATGATGGCTCATACTAG+CGG | + | chr8_2:58245058-58245077 | Msa1257610:CDS | 45.0% |
| AGCGGTCCTCAATTTCTACT+TGG | + | chr8_2:58245076-58245095 | Msa1257610:intron | 45.0% | |
| !! | CTATTGCTCCTGCTTTTAGG+TGG | + | chr8_2:58245281-58245300 | Msa1257610:CDS | 45.0% |
| GGTGTCCAAATGTGAGGAAA+AGG | + | chr8_2:58245323-58245342 | Msa1257610:CDS | 45.0% | |
| TGTGAGGAAAAGGAGTAGCA+AGG | + | chr8_2:58245333-58245352 | Msa1257610:CDS | 45.0% | |
| GTGAGGAAAAGGAGTAGCAA+GGG | + | chr8_2:58245334-58245353 | Msa1257610:CDS | 45.0% | |
| TAACCGGTGGTTTAGGAAGT+TGG | + | chr8_2:58245432-58245451 | Msa1257610:CDS | 45.0% | |
| TTTCGATTTACCCTATGCGG+TGG | + | chr8_2:58245539-58245558 | Msa1257610:CDS | 45.0% | |
| ! | ACAGATTCGGGTTTAGGAAC+AGG | + | chr8_2:58245613-58245632 | Msa1257610:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | + | chr8_2:58245655-58245674 | Msa1257610:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGTG+AGG | + | chr8_2:58245660-58245679 | Msa1257610:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | + | chr8_2:58245838-58245857 | Msa1257610:CDS | 45.0% | |
| GGAAGTGACCAACTATATGG+AGG | - | chr8_2:58245871-58245890 | None:intergenic | 45.0% | |
| GAGCTGATCTCTATGGAAAG+TGG | + | chr8_2:58246067-58246086 | Msa1257610:CDS | 45.0% | |
| ACAGCCTCTCACGAGTATTA+TGG | - | chr8_2:58246320-58246339 | None:intergenic | 45.0% | |
| ! | TAGTGCTATTGAAGAGAGGG+AGG | + | chr8_2:58246425-58246444 | Msa1257610:CDS | 45.0% |
| AATCTTCGATGTTAGTCCCG+CGG | - | chr8_2:58246542-58246561 | None:intergenic | 45.0% | |
| GGAGGAGAATGACATTTGCA+TGG | + | chr8_2:58246617-58246636 | Msa1257610:CDS | 45.0% | |
| CATGGCTCCTCCTAAATTGA+GGG | + | chr8_2:58246635-58246654 | Msa1257610:CDS | 45.0% | |
| TGTGACACCAAGAGAAGGCA+TGG | - | chr8_2:58244729-58244748 | None:intergenic | 50.0% | |
| GCAGCAAACCACCTAAAAGC+AGG | - | chr8_2:58245292-58245311 | None:intergenic | 50.0% | |
| !!! | GTTTTCGGATTGGTAACCGG+TGG | + | chr8_2:58245419-58245438 | Msa1257610:CDS | 50.0% |
| ! | GGATTGGTAACCGGTGGTTT+AGG | + | chr8_2:58245425-58245444 | Msa1257610:CDS | 50.0% |
| GAGCCAACTTCCTAAACCAC+CGG | - | chr8_2:58245438-58245457 | None:intergenic | 50.0% | |
| TTACCCTATGCGGTGGATCT+TGG | + | chr8_2:58245546-58245565 | Msa1257610:CDS | 50.0% | |
| TACCCTATGCGGTGGATCTT+GGG | + | chr8_2:58245547-58245566 | Msa1257610:CDS | 50.0% | |
| ATCCCAAGATCCACCGCATA+GGG | - | chr8_2:58245552-58245571 | None:intergenic | 50.0% | |
| AATCCCAAGATCCACCGCAT+AGG | - | chr8_2:58245553-58245572 | None:intergenic | 50.0% | |
| TTTAGGAACAGGCAGAAGGC+AGG | + | chr8_2:58245624-58245643 | Msa1257610:CDS | 50.0% | |
| GCAGAAGGCAGGACCTAAAA+CGG | + | chr8_2:58245635-58245654 | Msa1257610:CDS | 50.0% | |
| TCTCGAAGGTGAGGAAGAGT+TGG | + | chr8_2:58245669-58245688 | Msa1257610:CDS | 50.0% | |
| ! | AGGTGAGGAAGAGTTGGTTG+AGG | + | chr8_2:58245675-58245694 | Msa1257610:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | - | chr8_2:58245853-58245872 | None:intergenic | 50.0% | |
| TGGCATGGAGCTGATCTCTA+TGG | + | chr8_2:58246060-58246079 | Msa1257610:CDS | 50.0% | |
| !! | CCTAAAGTGGATTGTTGCCG+CGG | + | chr8_2:58246522-58246541 | Msa1257610:CDS | 50.0% |
| !! | CTAAAGTGGATTGTTGCCGC+GGG | + | chr8_2:58246523-58246542 | Msa1257610:CDS | 50.0% |
| GCGGGACTAACATCGAAGAT+TGG | + | chr8_2:58246541-58246560 | Msa1257610:CDS | 50.0% | |
| GCATGGCTCCTCCTAAATTG+AGG | + | chr8_2:58246634-58246653 | Msa1257610:CDS | 50.0% | |
| TGTGACACCAAGAGAAGGCA+TGG | - | chr8_2:58244729-58244748 | None:intergenic | 50.0% | |
| GCAGCAAACCACCTAAAAGC+AGG | - | chr8_2:58245292-58245311 | None:intergenic | 50.0% | |
| !!! | GTTTTCGGATTGGTAACCGG+TGG | + | chr8_2:58245419-58245438 | Msa1257610:CDS | 50.0% |
| ! | GGATTGGTAACCGGTGGTTT+AGG | + | chr8_2:58245425-58245444 | Msa1257610:CDS | 50.0% |
| GAGCCAACTTCCTAAACCAC+CGG | - | chr8_2:58245438-58245457 | None:intergenic | 50.0% | |
| TTACCCTATGCGGTGGATCT+TGG | + | chr8_2:58245546-58245565 | Msa1257610:CDS | 50.0% | |
| TACCCTATGCGGTGGATCTT+GGG | + | chr8_2:58245547-58245566 | Msa1257610:CDS | 50.0% | |
| ATCCCAAGATCCACCGCATA+GGG | - | chr8_2:58245552-58245571 | None:intergenic | 50.0% | |
| AATCCCAAGATCCACCGCAT+AGG | - | chr8_2:58245553-58245572 | None:intergenic | 50.0% | |
| TTTAGGAACAGGCAGAAGGC+AGG | + | chr8_2:58245624-58245643 | Msa1257610:CDS | 50.0% | |
| GCAGAAGGCAGGACCTAAAA+CGG | + | chr8_2:58245635-58245654 | Msa1257610:CDS | 50.0% | |
| TCTCGAAGGTGAGGAAGAGT+TGG | + | chr8_2:58245669-58245688 | Msa1257610:CDS | 50.0% | |
| ! | AGGTGAGGAAGAGTTGGTTG+AGG | + | chr8_2:58245675-58245694 | Msa1257610:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | - | chr8_2:58245853-58245872 | None:intergenic | 50.0% | |
| TGGCATGGAGCTGATCTCTA+TGG | + | chr8_2:58246060-58246079 | Msa1257610:CDS | 50.0% | |
| !! | CCTAAAGTGGATTGTTGCCG+CGG | + | chr8_2:58246522-58246541 | Msa1257610:CDS | 50.0% |
| !! | CTAAAGTGGATTGTTGCCGC+GGG | + | chr8_2:58246523-58246542 | Msa1257610:CDS | 50.0% |
| GCGGGACTAACATCGAAGAT+TGG | + | chr8_2:58246541-58246560 | Msa1257610:CDS | 50.0% | |
| GCATGGCTCCTCCTAAATTG+AGG | + | chr8_2:58246634-58246653 | Msa1257610:CDS | 50.0% | |
| GCTAGCTGATCATGACGGTG+AGG | - | chr8_2:58244662-58244681 | None:intergenic | 55.0% | |
| CAAGTTGCTGCTGTTGGCGT+TGG | + | chr8_2:58245256-58245275 | Msa1257610:CDS | 55.0% | |
| CGGGTTTAGGAACAGGCAGA+AGG | + | chr8_2:58245620-58245639 | Msa1257610:CDS | 55.0% | |
| CCGCGGCAACAATCCACTTT+AGG | - | chr8_2:58246525-58246544 | None:intergenic | 55.0% | |
| GCTAGCTGATCATGACGGTG+AGG | - | chr8_2:58244662-58244681 | None:intergenic | 55.0% | |
| CAAGTTGCTGCTGTTGGCGT+TGG | + | chr8_2:58245256-58245275 | Msa1257610:CDS | 55.0% | |
| CGGGTTTAGGAACAGGCAGA+AGG | + | chr8_2:58245620-58245639 | Msa1257610:CDS | 55.0% | |
| CCGCGGCAACAATCCACTTT+AGG | - | chr8_2:58246525-58246544 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58244656 | 58246707 | 58244656 | ID=Msa1257610;Name=Msa1257610 |
| chr8_2 | mRNA | 58244656 | 58246707 | 58244656 | ID=Msa1257610-mRNA-1;Parent=Msa1257610;Name=Msa1257610-mRNA-1;_AED=0.12;_eAED=0.17;_QI=0|0|0.25|1|0|0|4|27|609 |
| chr8_2 | exon | 58244656 | 58244836 | 58244656 | ID=Msa1257610-mRNA-1:exon:18056;Parent=Msa1257610-mRNA-1 |
| chr8_2 | exon | 58244851 | 58244957 | 58244851 | ID=Msa1257610-mRNA-1:exon:18057;Parent=Msa1257610-mRNA-1 |
| chr8_2 | exon | 58244965 | 58245079 | 58244965 | ID=Msa1257610-mRNA-1:exon:18058;Parent=Msa1257610-mRNA-1 |
| chr8_2 | exon | 58245254 | 58246707 | 58245254 | ID=Msa1257610-mRNA-1:exon:18059;Parent=Msa1257610-mRNA-1 |
| chr8_2 | CDS | 58244656 | 58244836 | 58244656 | ID=Msa1257610-mRNA-1:cds;Parent=Msa1257610-mRNA-1 |
| chr8_2 | CDS | 58244851 | 58244957 | 58244851 | ID=Msa1257610-mRNA-1:cds;Parent=Msa1257610-mRNA-1 |
| chr8_2 | CDS | 58244965 | 58245079 | 58244965 | ID=Msa1257610-mRNA-1:cds;Parent=Msa1257610-mRNA-1 |
| chr8_2 | CDS | 58245254 | 58246680 | 58245254 | ID=Msa1257610-mRNA-1:cds;Parent=Msa1257610-mRNA-1 |
| chr8_2 | three_prime_UTR | 58246681 | 58246707 | 58246681 | ID=Msa1257610-mRNA-1:three_prime_utr;Parent=Msa1257610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
