Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207390 | XP_003608726.2 | 78.932 | 674 | 77 | 4 | 1 | 609 | 85 | 758 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063940 | Msa1207390 | 0.812002 | 5.278585e-51 | -8.615850e-47 |
| Msa0657710 | Msa1207390 | 0.807792 | 4.252290e-50 | -8.615850e-47 |
| Msa0657720 | Msa1207390 | 0.832851 | 7.468044e-56 | -8.615850e-47 |
| Msa0702790 | Msa1207390 | 0.827649 | 1.392270e-54 | -8.615850e-47 |
| Msa0702800 | Msa1207390 | 0.807107 | 5.941330e-50 | -8.615850e-47 |
| Msa0723090 | Msa1207390 | 0.817483 | 3.221258e-52 | -8.615850e-47 |
| Msa0828950 | Msa1207390 | 0.831462 | 1.647113e-55 | -8.615850e-47 |
| Msa0828960 | Msa1207390 | 0.807340 | 5.301802e-50 | -8.615850e-47 |
| Msa0166190 | Msa1207390 | 0.805344 | 1.396542e-49 | -8.615850e-47 |
| Msa0217060 | Msa1207390 | 0.806737 | 7.113638e-50 | -8.615850e-47 |
| Msa1015360 | Msa1207390 | 0.832077 | 1.161066e-55 | -8.615850e-47 |
| Msa1019420 | Msa1207390 | 0.822690 | 2.069747e-53 | -8.615850e-47 |
| Msa1034450 | Msa1207390 | 0.804646 | 1.954578e-49 | -8.615850e-47 |
| Msa1044250 | Msa1207390 | 0.808355 | 3.225696e-50 | -8.615850e-47 |
| Msa1074200 | Msa1207390 | 0.807399 | 5.151277e-50 | -8.615850e-47 |
| Msa1092310 | Msa1207390 | 0.810874 | 9.276899e-51 | -8.615850e-47 |
| Msa0256920 | Msa1207390 | 0.803690 | 3.090685e-49 | -8.615850e-47 |
| Msa1133700 | Msa1207390 | 0.805038 | 1.618541e-49 | -8.615850e-47 |
| Msa1202800 | Msa1207390 | 0.837411 | 5.280006e-57 | -8.615850e-47 |
| Msa1207390 | Msa1207430 | 0.989993 | 1.434541e-180 | -8.615850e-47 |
| Msa1207390 | Msa1207920 | -0.800392 | 1.472946e-48 | -8.615850e-47 |
| Msa1207390 | Msa1238190 | 0.802563 | 5.286700e-49 | -8.615850e-47 |
| Msa1207390 | Msa1255210 | 0.837860 | 4.051433e-57 | -8.615850e-47 |
| Msa1207390 | Msa1257610 | 0.992606 | 2.584799e-194 | -8.615850e-47 |
| Msa1207390 | Msa1295650 | 0.833907 | 4.071655e-56 | -8.615850e-47 |
| Msa1207390 | Msa1323010 | 0.806750 | 7.069410e-50 | -8.615850e-47 |
| Msa1207390 | Msa1439930 | 0.815130 | 1.082151e-51 | -8.615850e-47 |
| Msa0577490 | Msa1207390 | 0.800012 | 1.759272e-48 | -8.615850e-47 |
| Msa0905570 | Msa1207390 | 0.806685 | 7.296458e-50 | -8.615850e-47 |
| Msa0946330 | Msa1207390 | 0.806687 | 7.288994e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207390 | MtrunA17_Chr4g0056271 | 68.242 | 677 | 142 | 8 | 1 | 609 | 83 | 754 | 0.0 | 861 |
| Msa1207390 | MtrunA17_Chr4g0056281 | 74.162 | 507 | 66 | 4 | 1 | 442 | 85 | 591 | 0.0 | 712 |
| Msa1207390 | MtrunA17_Chr4g0056291 | 93.220 | 59 | 4 | 0 | 551 | 609 | 1 | 59 | 4.61e-33 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207390 | AT5G47580.1 | 37.750 | 649 | 335 | 9 | 1 | 582 | 83 | 729 | 9.07e-131 | 401 |
| Msa1207390 | AT4G17250.1 | 36.986 | 657 | 333 | 14 | 1 | 584 | 80 | 728 | 1.81e-117 | 366 |
| Msa1207390 | AT4G17250.3 | 43.516 | 455 | 245 | 6 | 136 | 584 | 181 | 629 | 2.79e-117 | 363 |
| Msa1207390 | AT4G17250.2 | 37.455 | 550 | 270 | 12 | 1 | 481 | 80 | 624 | 5.01e-95 | 305 |
Find 108 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACGCTATATCTGTTAA+AGG | 0.163957 | 8_1:+64841305 | Msa1207390:CDS |
| TTGGATGCCAATACTTTAAT+AGG | 0.211350 | 8_1:-64841146 | None:intergenic |
| TCAATGTTGCATGGATTTAA+AGG | 0.244994 | 8_1:+64840705 | Msa1207390:CDS |
| AACAATTCAATAACAAGTTT+TGG | 0.257554 | 8_1:-64840669 | None:intergenic |
| ATATTATCTTGTGTGTATTA+AGG | 0.259802 | 8_1:+64841106 | Msa1207390:CDS |
| AATGGTACAGATTCGGGTTT+AGG | 0.260859 | 8_1:+64840516 | Msa1207390:CDS |
| TCCATGTAATGTTTCATCTT+TGG | 0.271186 | 8_1:-64839838 | None:intergenic |
| GAGATGAATTGTTGAAATTC+TGG | 0.271539 | 8_1:+64839947 | Msa1207390:CDS |
| AGGCAAATGTCCCTCAATTT+AGG | 0.283800 | 8_1:-64841554 | None:intergenic |
| TAATGTCTCAAGTGTCTCTT+TGG | 0.302092 | 8_1:-64841042 | None:intergenic |
| AAATTCAATGGTACAGATTC+GGG | 0.312280 | 8_1:+64840510 | Msa1207390:CDS |
| TGAAACCATGTTGAATGTTT+TGG | 0.313595 | 8_1:+64839666 | Msa1207390:CDS |
| TTTGTGAGTATTTCAAGAAT+TGG | 0.319604 | 8_1:+64840481 | Msa1207390:CDS |
| GTTATGATTGCTGATATATT+AGG | 0.327555 | 8_1:+64841263 | Msa1207390:CDS |
| AAAATTCAATGGTACAGATT+CGG | 0.346213 | 8_1:+64840509 | Msa1207390:CDS |
| ATTTGTATACAGTTTGTAAC+TGG | 0.348616 | 8_1:+64839724 | Msa1207390:CDS |
| TTACCCTATGCGGTGGATCT+TGG | 0.348786 | 8_1:+64840455 | Msa1207390:CDS |
| TACCCTATGCGGTGGATCTT+GGG | 0.363258 | 8_1:+64840456 | Msa1207390:CDS |
| CCGCGGCAACAATCCACTTT+AGG | 0.374074 | 8_1:-64841431 | None:intergenic |
| TGCTTTAATTTGCACTATCA+TGG | 0.383099 | 8_1:+64839606 | Msa1207390:CDS |
| ACAGCCTCTCACGAGTATTA+TGG | 0.398293 | 8_1:-64841226 | None:intergenic |
| TTGCATGGATTTAAAGGAGT+TGG | 0.399932 | 8_1:+64840711 | Msa1207390:CDS |
| GGATTGGTAACCGGTGGTTT+AGG | 0.400590 | 8_1:+64840334 | Msa1207390:CDS |
| AAAGAGAGCCTTTCCTAAAG+TGG | 0.408572 | 8_1:+64841418 | Msa1207390:CDS |
| TGGCATGGAGCTGATCTCTA+TGG | 0.410840 | 8_1:+64840969 | Msa1207390:CDS |
| TTACCAATCCGAAAACTAAT+CGG | 0.413192 | 8_1:-64840321 | None:intergenic |
| GCTAATTCCATGCCTTCTCT+TGG | 0.416271 | 8_1:+64839628 | Msa1207390:CDS |
| ATAGGAAGTGACCAACTATA+TGG | 0.422490 | 8_1:-64840780 | None:intergenic |
| GTTTAATGCTTAAGCAAAAC+AGG | 0.422568 | 8_1:+64841474 | Msa1207390:CDS |
| ATGCTTGCTAGTGTAACAAT+AGG | 0.433859 | 8_1:-64840798 | None:intergenic |
| ACAGATTCGGGTTTAGGAAC+AGG | 0.437251 | 8_1:+64840522 | Msa1207390:CDS |
| GGTGTCCAAATGTGAGGAAA+AGG | 0.448572 | 8_1:+64840232 | Msa1207390:CDS |
| ATTGTGATGCAACTACTCAT+TGG | 0.449727 | 8_1:+64840622 | Msa1207390:CDS |
| TAACCGGTGGTTTAGGAAGT+TGG | 0.452691 | 8_1:+64840341 | Msa1207390:CDS |
| AGCATGGCCTATTAAAGTAT+TGG | 0.452708 | 8_1:+64841139 | Msa1207390:CDS |
| GCTTATTCTGTACATTGCAT+TGG | 0.454548 | 8_1:-64841165 | None:intergenic |
| CCTAGATATTGACTAAAAGC+TGG | 0.466905 | 8_1:+64841574 | Msa1207390:exon |
| AGAGAAGCAGTTTATGTGCT+TGG | 0.467580 | 8_1:+64841365 | Msa1207390:CDS |
| TCCAAATGTGGAAAAGTGTT+TGG | 0.472475 | 8_1:+64840833 | Msa1207390:CDS |
| GACCGAATTCTTCCTTTGCA+TGG | 0.473735 | 8_1:+64840747 | Msa1207390:CDS |
| CTCCAGTGATGATAGTATAG+AGG | 0.477229 | 8_1:-64841507 | None:intergenic |
| GCATGGCTCCTCCTAAATTG+AGG | 0.479692 | 8_1:+64841543 | Msa1207390:CDS |
| ATCTTGATTCAACAGAAGAA+TGG | 0.480699 | 8_1:-64841192 | None:intergenic |
| CATGGCTCCTCCTAAATTGA+GGG | 0.481009 | 8_1:+64841544 | Msa1207390:CDS |
| CACCATGCAAAGGAAGAATT+CGG | 0.481803 | 8_1:-64840749 | None:intergenic |
| TTTCTGTATTAAACTACAGA+TGG | 0.484663 | 8_1:+64840392 | Msa1207390:CDS |
| GAATAGTGCTATTGAAGAGA+GGG | 0.485535 | 8_1:+64841331 | Msa1207390:CDS |
| GAAAATAACATTGACAAAGA+AGG | 0.485570 | 8_1:+64840909 | Msa1207390:CDS |
| TTACTGGACTGATAGTTTAG+TGG | 0.485603 | 8_1:+64840284 | Msa1207390:CDS |
| GGTTTGCTGCTGTTAAATAT+AGG | 0.487367 | 8_1:+64840211 | Msa1207390:CDS |
| ATAGTTCAAGTTGCTGCTGT+TGG | 0.491201 | 8_1:+64840159 | Msa1207390:intron |
| ACATCTGAAATTGTTTGGCA+TGG | 0.494574 | 8_1:+64840954 | Msa1207390:CDS |
| TGAATAGTGCTATTGAAGAG+AGG | 0.495189 | 8_1:+64841330 | Msa1207390:CDS |
| AATTGGAAATCAAAATTCAA+TGG | 0.495406 | 8_1:+64840498 | Msa1207390:CDS |
| CAAGTTGCTGCTGTTGGCGT+TGG | 0.498230 | 8_1:+64840165 | Msa1207390:CDS |
| TTGTGATGCAACTACTCATT+GGG | 0.503945 | 8_1:+64840623 | Msa1207390:CDS |
| ATCCCAAGATCCACCGCATA+GGG | 0.509363 | 8_1:-64840458 | None:intergenic |
| ATTGTTGAAATTCTGGATGA+TGG | 0.511008 | 8_1:+64839954 | Msa1207390:CDS |
| TATAGTTGCACTTCCAAATG+TGG | 0.517480 | 8_1:+64840821 | Msa1207390:CDS |
| AAAATAACATTGACAAAGAA+GGG | 0.520371 | 8_1:+64840910 | Msa1207390:CDS |
| TCCCTCTATACTATCATCAC+TGG | 0.526334 | 8_1:+64841505 | Msa1207390:CDS |
| GCAGAAGGCAGGACCTAAAA+CGG | 0.527369 | 8_1:+64840544 | Msa1207390:CDS |
| TAGTGCTATTGAAGAGAGGG+AGG | 0.527847 | 8_1:+64841334 | Msa1207390:CDS |
| TGATCATGACGGTGAGGCAT+AGG | 0.532938 | 8_1:-64839562 | None:intergenic |
| GCGGGACTAACATCGAAGAT+TGG | 0.534187 | 8_1:+64841450 | Msa1207390:CDS |
| TTCTGTATTAAACTACAGAT+GGG | 0.537735 | 8_1:+64840393 | Msa1207390:CDS |
| GTGAGGAAAAGGAGTAGCAA+GGG | 0.538430 | 8_1:+64840243 | Msa1207390:CDS |
| ACCAAAGATGAAACATTACA+TGG | 0.541625 | 8_1:+64839837 | Msa1207390:CDS |
| GTGTAGAACCTCCATATAGT+TGG | 0.552822 | 8_1:+64840769 | Msa1207390:CDS |
| AGGTGAGGAAGAGTTGGTTG+AGG | 0.553378 | 8_1:+64840584 | Msa1207390:CDS |
| AATCCCAAGATCCACCGCAT+AGG | 0.553870 | 8_1:-64840459 | None:intergenic |
| CCTAAAGTGGATTGTTGCCG+CGG | 0.561298 | 8_1:+64841431 | Msa1207390:CDS |
| AATGTCTCAAGTGTCTCTTT+GGG | 0.563830 | 8_1:-64841041 | None:intergenic |
| CGGGTTTAGGAACAGGCAGA+AGG | 0.567799 | 8_1:+64840529 | Msa1207390:CDS |
| CGGTTTATTCTGCATCTCGA+AGG | 0.569485 | 8_1:+64840564 | Msa1207390:CDS |
| TTTAGGAACAGGCAGAAGGC+AGG | 0.571095 | 8_1:+64840533 | Msa1207390:CDS |
| CTAAAGTGGATTGTTGCCGC+GGG | 0.575399 | 8_1:+64841432 | Msa1207390:CDS |
| TGTGACACCAAGAGAAGGCA+TGG | 0.576519 | 8_1:-64839635 | None:intergenic |
| TCTCGAAGGTGAGGAAGAGT+TGG | 0.577120 | 8_1:+64840578 | Msa1207390:CDS |
| TCCAGTGATGATAGTATAGA+GGG | 0.580375 | 8_1:-64841506 | None:intergenic |
| GCAACAATCCACTTTAGGAA+AGG | 0.581142 | 8_1:-64841426 | None:intergenic |
| GAGCTGATCTCTATGGAAAG+TGG | 0.582667 | 8_1:+64840976 | Msa1207390:CDS |
| GCAGCAAACCACCTAAAAGC+AGG | 0.583806 | 8_1:-64840198 | None:intergenic |
| TTTCGATTTACCCTATGCGG+TGG | 0.586710 | 8_1:+64840448 | Msa1207390:CDS |
| TTCTGTGTGACACCAAGAGA+AGG | 0.606691 | 8_1:-64839640 | None:intergenic |
| TTGTTTCGATTTACCCTATG+CGG | 0.611581 | 8_1:+64840445 | Msa1207390:CDS |
| CAAATGTCCCTCAATTTAGG+AGG | 0.613143 | 8_1:-64841551 | None:intergenic |
| ACTACTCATTGGGTTGAACA+AGG | 0.615223 | 8_1:+64840633 | Msa1207390:CDS |
| AATATAGGTGTCCAAATGTG+AGG | 0.619576 | 8_1:+64840226 | Msa1207390:CDS |
| GAGCCAACTTCCTAAACCAC+CGG | 0.620931 | 8_1:-64840344 | None:intergenic |
| TATTCTGCATCTCGAAGGTG+AGG | 0.624822 | 8_1:+64840569 | Msa1207390:CDS |
| CATAGCCAAAACATTCAACA+TGG | 0.624825 | 8_1:-64839671 | None:intergenic |
| TATTAAACTACAGATGGGGA+TGG | 0.629487 | 8_1:+64840398 | Msa1207390:CDS |
| CTCTATACTATCATCACTGG+AGG | 0.632764 | 8_1:+64841508 | Msa1207390:CDS |
| TGTGAGGAAAAGGAGTAGCA+AGG | 0.636275 | 8_1:+64840242 | Msa1207390:CDS |
| GGAGGAGAATGACATTTGCA+TGG | 0.636716 | 8_1:+64841526 | Msa1207390:CDS |
| GGAGGTTCTACACCATGCAA+AGG | 0.640891 | 8_1:-64840759 | None:intergenic |
| ACTTTAATAGGCCATGCTGA+AGG | 0.649984 | 8_1:-64841134 | None:intergenic |
| TCTGTATTAAACTACAGATG+GGG | 0.654899 | 8_1:+64840394 | Msa1207390:CDS |
| GCTTTGCTAGCTGATCATGA+CGG | 0.671296 | 8_1:-64839573 | None:intergenic |
| AAGACCATAATACTCGTGAG+AGG | 0.671965 | 8_1:+64841222 | Msa1207390:CDS |
| GGAAGTGACCAACTATATGG+AGG | 0.678302 | 8_1:-64840777 | None:intergenic |
| AATCTTCGATGTTAGTCCCG+CGG | 0.679064 | 8_1:-64841448 | None:intergenic |
| AGATATTGACTAAAAGCTGG+AGG | 0.679125 | 8_1:+64841577 | Msa1207390:exon |
| TTAAGGTAAGTCCTTCAGCA+TGG | 0.681137 | 8_1:+64841123 | Msa1207390:CDS |
| TGGATGATGGCTCATACTAG+CGG | 0.682855 | 8_1:+64839967 | Msa1207390:CDS |
| CCTTTAACAGATATAGCGTG+TGG | 0.685524 | 8_1:-64841305 | None:intergenic |
| GCTAGCTGATCATGACGGTG+AGG | 0.686156 | 8_1:-64839568 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGGAAATCAAAATTCAA+TGG | + | chr8_1:64840498-64840517 | Msa1207390:CDS | 20.0% |
| !!! | AACAATTCAATAACAAGTTT+TGG | - | chr8_1:64840672-64840691 | None:intergenic | 20.0% |
| !! | AAAATAACATTGACAAAGAA+GGG | + | chr8_1:64840910-64840929 | Msa1207390:CDS | 20.0% |
| !! | ATATTATCTTGTGTGTATTA+AGG | + | chr8_1:64841106-64841125 | Msa1207390:CDS | 20.0% |
| !! | AATTGGAAATCAAAATTCAA+TGG | + | chr8_1:64840498-64840517 | Msa1207390:CDS | 20.0% |
| !!! | AACAATTCAATAACAAGTTT+TGG | - | chr8_1:64840672-64840691 | None:intergenic | 20.0% |
| !! | AAAATAACATTGACAAAGAA+GGG | + | chr8_1:64840910-64840929 | Msa1207390:CDS | 20.0% |
| !! | ATATTATCTTGTGTGTATTA+AGG | + | chr8_1:64841106-64841125 | Msa1207390:CDS | 20.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | + | chr8_1:64839724-64839743 | Msa1207390:CDS | 25.0% |
| ! | TTTCTGTATTAAACTACAGA+TGG | + | chr8_1:64840392-64840411 | Msa1207390:CDS | 25.0% |
| ! | TTCTGTATTAAACTACAGAT+GGG | + | chr8_1:64840393-64840412 | Msa1207390:CDS | 25.0% |
| ! | TTTGTGAGTATTTCAAGAAT+TGG | + | chr8_1:64840481-64840500 | Msa1207390:CDS | 25.0% |
| ! | AAAATTCAATGGTACAGATT+CGG | + | chr8_1:64840509-64840528 | Msa1207390:CDS | 25.0% |
| ! | AAAAAATGTTCAATGTTGCA+TGG | + | chr8_1:64840696-64840715 | Msa1207390:CDS | 25.0% |
| !! | GTTTGGTGAAAAATTTGATT+AGG | + | chr8_1:64840850-64840869 | Msa1207390:CDS | 25.0% |
| !! | TTTTCGATGAAATTCACATA+AGG | - | chr8_1:64840894-64840913 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+AGG | + | chr8_1:64840909-64840928 | Msa1207390:CDS | 25.0% |
| !! | GAAAAACATCTGAAATTGTT+TGG | + | chr8_1:64840949-64840968 | Msa1207390:CDS | 25.0% |
| ! | GTTATGATTGCTGATATATT+AGG | + | chr8_1:64841263-64841282 | Msa1207390:CDS | 25.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | + | chr8_1:64839724-64839743 | Msa1207390:CDS | 25.0% |
| ! | TTTCTGTATTAAACTACAGA+TGG | + | chr8_1:64840392-64840411 | Msa1207390:CDS | 25.0% |
| ! | TTCTGTATTAAACTACAGAT+GGG | + | chr8_1:64840393-64840412 | Msa1207390:CDS | 25.0% |
| ! | TTTGTGAGTATTTCAAGAAT+TGG | + | chr8_1:64840481-64840500 | Msa1207390:CDS | 25.0% |
| ! | AAAATTCAATGGTACAGATT+CGG | + | chr8_1:64840509-64840528 | Msa1207390:CDS | 25.0% |
| ! | AAAAAATGTTCAATGTTGCA+TGG | + | chr8_1:64840696-64840715 | Msa1207390:CDS | 25.0% |
| !! | GTTTGGTGAAAAATTTGATT+AGG | + | chr8_1:64840850-64840869 | Msa1207390:CDS | 25.0% |
| !! | TTTTCGATGAAATTCACATA+AGG | - | chr8_1:64840894-64840913 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+AGG | + | chr8_1:64840909-64840928 | Msa1207390:CDS | 25.0% |
| !! | GAAAAACATCTGAAATTGTT+TGG | + | chr8_1:64840949-64840968 | Msa1207390:CDS | 25.0% |
| ! | GTTATGATTGCTGATATATT+AGG | + | chr8_1:64841263-64841282 | Msa1207390:CDS | 25.0% |
| !! | TGCTTTAATTTGCACTATCA+TGG | + | chr8_1:64839606-64839625 | Msa1207390:CDS | 30.0% |
| ! | TGAAACCATGTTGAATGTTT+TGG | + | chr8_1:64839666-64839685 | Msa1207390:CDS | 30.0% |
| !!! | CTGGTGTTATTTATGAGTTT+TGG | + | chr8_1:64839743-64839762 | Msa1207390:intron | 30.0% |
| ACCAAAGATGAAACATTACA+TGG | + | chr8_1:64839837-64839856 | Msa1207390:CDS | 30.0% | |
| TCCATGTAATGTTTCATCTT+TGG | - | chr8_1:64839841-64839860 | None:intergenic | 30.0% | |
| TTACATGGAGTTGAAGTATA+AGG | + | chr8_1:64839852-64839871 | Msa1207390:intron | 30.0% | |
| GAGATGAATTGTTGAAATTC+TGG | + | chr8_1:64839947-64839966 | Msa1207390:CDS | 30.0% | |
| ATTGTTGAAATTCTGGATGA+TGG | + | chr8_1:64839954-64839973 | Msa1207390:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | + | chr8_1:64840079-64840098 | Msa1207390:intron | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | + | chr8_1:64840083-64840102 | Msa1207390:intron | 30.0% |
| !!! | AAGGGAATTTTTCAAGTAGA+AGG | + | chr8_1:64840261-64840280 | Msa1207390:CDS | 30.0% |
| !!! | TTTTTCAAGTAGAAGGTTAC+TGG | + | chr8_1:64840268-64840287 | Msa1207390:CDS | 30.0% |
| TTACCAATCCGAAAACTAAT+CGG | - | chr8_1:64840324-64840343 | None:intergenic | 30.0% | |
| TCTGTATTAAACTACAGATG+GGG | + | chr8_1:64840394-64840413 | Msa1207390:CDS | 30.0% | |
| AAATTCAATGGTACAGATTC+GGG | + | chr8_1:64840510-64840529 | Msa1207390:CDS | 30.0% | |
| TCAATGTTGCATGGATTTAA+AGG | + | chr8_1:64840705-64840724 | Msa1207390:CDS | 30.0% | |
| TTGGATGCCAATACTTTAAT+AGG | - | chr8_1:64841149-64841168 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | - | chr8_1:64841195-64841214 | None:intergenic | 30.0% | |
| GTTTAATGCTTAAGCAAAAC+AGG | + | chr8_1:64841474-64841493 | Msa1207390:CDS | 30.0% | |
| !! | TGCTTTAATTTGCACTATCA+TGG | + | chr8_1:64839606-64839625 | Msa1207390:CDS | 30.0% |
| ! | TGAAACCATGTTGAATGTTT+TGG | + | chr8_1:64839666-64839685 | Msa1207390:CDS | 30.0% |
| !!! | CTGGTGTTATTTATGAGTTT+TGG | + | chr8_1:64839743-64839762 | Msa1207390:intron | 30.0% |
| ACCAAAGATGAAACATTACA+TGG | + | chr8_1:64839837-64839856 | Msa1207390:CDS | 30.0% | |
| TCCATGTAATGTTTCATCTT+TGG | - | chr8_1:64839841-64839860 | None:intergenic | 30.0% | |
| TTACATGGAGTTGAAGTATA+AGG | + | chr8_1:64839852-64839871 | Msa1207390:intron | 30.0% | |
| GAGATGAATTGTTGAAATTC+TGG | + | chr8_1:64839947-64839966 | Msa1207390:CDS | 30.0% | |
| ATTGTTGAAATTCTGGATGA+TGG | + | chr8_1:64839954-64839973 | Msa1207390:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | + | chr8_1:64840079-64840098 | Msa1207390:intron | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | + | chr8_1:64840083-64840102 | Msa1207390:intron | 30.0% |
| !!! | AAGGGAATTTTTCAAGTAGA+AGG | + | chr8_1:64840261-64840280 | Msa1207390:CDS | 30.0% |
| !!! | TTTTTCAAGTAGAAGGTTAC+TGG | + | chr8_1:64840268-64840287 | Msa1207390:CDS | 30.0% |
| TTACCAATCCGAAAACTAAT+CGG | - | chr8_1:64840324-64840343 | None:intergenic | 30.0% | |
| TCTGTATTAAACTACAGATG+GGG | + | chr8_1:64840394-64840413 | Msa1207390:CDS | 30.0% | |
| AAATTCAATGGTACAGATTC+GGG | + | chr8_1:64840510-64840529 | Msa1207390:CDS | 30.0% | |
| TCAATGTTGCATGGATTTAA+AGG | + | chr8_1:64840705-64840724 | Msa1207390:CDS | 30.0% | |
| TTGGATGCCAATACTTTAAT+AGG | - | chr8_1:64841149-64841168 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | - | chr8_1:64841195-64841214 | None:intergenic | 30.0% | |
| GTTTAATGCTTAAGCAAAAC+AGG | + | chr8_1:64841474-64841493 | Msa1207390:CDS | 30.0% | |
| CATAGCCAAAACATTCAACA+TGG | - | chr8_1:64839674-64839693 | None:intergenic | 35.0% | |
| !!! | CATGTTGAATGTTTTGGCTA+TGG | + | chr8_1:64839672-64839691 | Msa1207390:CDS | 35.0% |
| !!! | TATGAGTTTTGGATCGAACA+TGG | + | chr8_1:64839754-64839773 | Msa1207390:intron | 35.0% |
| CTGGTGATTGTGATTACAAA+TGG | + | chr8_1:64840118-64840137 | Msa1207390:intron | 35.0% | |
| !! | GGTTTGCTGCTGTTAAATAT+AGG | + | chr8_1:64840211-64840230 | Msa1207390:CDS | 35.0% |
| AATATAGGTGTCCAAATGTG+AGG | + | chr8_1:64840226-64840245 | Msa1207390:CDS | 35.0% | |
| TTACTGGACTGATAGTTTAG+TGG | + | chr8_1:64840284-64840303 | Msa1207390:CDS | 35.0% | |
| !!! | TTAGTTTTCGGATTGGTAAC+CGG | + | chr8_1:64840325-64840344 | Msa1207390:CDS | 35.0% |
| TATTAAACTACAGATGGGGA+TGG | + | chr8_1:64840398-64840417 | Msa1207390:CDS | 35.0% | |
| TTGTTTCGATTTACCCTATG+CGG | + | chr8_1:64840445-64840464 | Msa1207390:CDS | 35.0% | |
| ! | GATGCAGAATAAACCGTTTT+AGG | - | chr8_1:64840560-64840579 | None:intergenic | 35.0% |
| ATTGTGATGCAACTACTCAT+TGG | + | chr8_1:64840622-64840641 | Msa1207390:CDS | 35.0% | |
| TTGTGATGCAACTACTCATT+GGG | + | chr8_1:64840623-64840642 | Msa1207390:CDS | 35.0% | |
| TTGCATGGATTTAAAGGAGT+TGG | + | chr8_1:64840711-64840730 | Msa1207390:CDS | 35.0% | |
| ATAGGAAGTGACCAACTATA+TGG | - | chr8_1:64840783-64840802 | None:intergenic | 35.0% | |
| ! | ATGCTTGCTAGTGTAACAAT+AGG | - | chr8_1:64840801-64840820 | None:intergenic | 35.0% |
| TATAGTTGCACTTCCAAATG+TGG | + | chr8_1:64840821-64840840 | Msa1207390:CDS | 35.0% | |
| !! | TCCAAATGTGGAAAAGTGTT+TGG | + | chr8_1:64840833-64840852 | Msa1207390:CDS | 35.0% |
| ! | ACCAAACACTTTTCCACATT+TGG | - | chr8_1:64840837-64840856 | None:intergenic | 35.0% |
| ! | ACATCTGAAATTGTTTGGCA+TGG | + | chr8_1:64840954-64840973 | Msa1207390:CDS | 35.0% |
| !!! | TTTGGGAGTCTTGTTTTGAA+GGG | - | chr8_1:64841027-64841046 | None:intergenic | 35.0% |
| AATGTCTCAAGTGTCTCTTT+GGG | - | chr8_1:64841044-64841063 | None:intergenic | 35.0% | |
| TAATGTCTCAAGTGTCTCTT+TGG | - | chr8_1:64841045-64841064 | None:intergenic | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | + | chr8_1:64841063-64841082 | Msa1207390:CDS | 35.0% | |
| AGCATGGCCTATTAAAGTAT+TGG | + | chr8_1:64841139-64841158 | Msa1207390:CDS | 35.0% | |
| GCTTATTCTGTACATTGCAT+TGG | - | chr8_1:64841168-64841187 | None:intergenic | 35.0% | |
| ! | TGAATAGTGCTATTGAAGAG+AGG | + | chr8_1:64841330-64841349 | Msa1207390:CDS | 35.0% |
| ! | GAATAGTGCTATTGAAGAGA+GGG | + | chr8_1:64841331-64841350 | Msa1207390:CDS | 35.0% |
| TCCAGTGATGATAGTATAGA+GGG | - | chr8_1:64841509-64841528 | None:intergenic | 35.0% | |
| ! | CCAGCTTTTAGTCAATATCT+AGG | - | chr8_1:64841577-64841596 | None:intergenic | 35.0% |
| ! | CCTAGATATTGACTAAAAGC+TGG | + | chr8_1:64841574-64841593 | Msa1207390:exon | 35.0% |
| ! | AGATATTGACTAAAAGCTGG+AGG | + | chr8_1:64841577-64841596 | Msa1207390:exon | 35.0% |
| CATAGCCAAAACATTCAACA+TGG | - | chr8_1:64839674-64839693 | None:intergenic | 35.0% | |
| !!! | CATGTTGAATGTTTTGGCTA+TGG | + | chr8_1:64839672-64839691 | Msa1207390:CDS | 35.0% |
| !!! | TATGAGTTTTGGATCGAACA+TGG | + | chr8_1:64839754-64839773 | Msa1207390:intron | 35.0% |
| CTGGTGATTGTGATTACAAA+TGG | + | chr8_1:64840118-64840137 | Msa1207390:intron | 35.0% | |
| !! | GGTTTGCTGCTGTTAAATAT+AGG | + | chr8_1:64840211-64840230 | Msa1207390:CDS | 35.0% |
| AATATAGGTGTCCAAATGTG+AGG | + | chr8_1:64840226-64840245 | Msa1207390:CDS | 35.0% | |
| TTACTGGACTGATAGTTTAG+TGG | + | chr8_1:64840284-64840303 | Msa1207390:CDS | 35.0% | |
| !!! | TTAGTTTTCGGATTGGTAAC+CGG | + | chr8_1:64840325-64840344 | Msa1207390:CDS | 35.0% |
| TATTAAACTACAGATGGGGA+TGG | + | chr8_1:64840398-64840417 | Msa1207390:CDS | 35.0% | |
| TTGTTTCGATTTACCCTATG+CGG | + | chr8_1:64840445-64840464 | Msa1207390:CDS | 35.0% | |
| ! | GATGCAGAATAAACCGTTTT+AGG | - | chr8_1:64840560-64840579 | None:intergenic | 35.0% |
| ATTGTGATGCAACTACTCAT+TGG | + | chr8_1:64840622-64840641 | Msa1207390:CDS | 35.0% | |
| TTGTGATGCAACTACTCATT+GGG | + | chr8_1:64840623-64840642 | Msa1207390:CDS | 35.0% | |
| TTGCATGGATTTAAAGGAGT+TGG | + | chr8_1:64840711-64840730 | Msa1207390:CDS | 35.0% | |
| ATAGGAAGTGACCAACTATA+TGG | - | chr8_1:64840783-64840802 | None:intergenic | 35.0% | |
| ! | ATGCTTGCTAGTGTAACAAT+AGG | - | chr8_1:64840801-64840820 | None:intergenic | 35.0% |
| TATAGTTGCACTTCCAAATG+TGG | + | chr8_1:64840821-64840840 | Msa1207390:CDS | 35.0% | |
| !! | TCCAAATGTGGAAAAGTGTT+TGG | + | chr8_1:64840833-64840852 | Msa1207390:CDS | 35.0% |
| ! | ACCAAACACTTTTCCACATT+TGG | - | chr8_1:64840837-64840856 | None:intergenic | 35.0% |
| ! | ACATCTGAAATTGTTTGGCA+TGG | + | chr8_1:64840954-64840973 | Msa1207390:CDS | 35.0% |
| !!! | TTTGGGAGTCTTGTTTTGAA+GGG | - | chr8_1:64841027-64841046 | None:intergenic | 35.0% |
| AATGTCTCAAGTGTCTCTTT+GGG | - | chr8_1:64841044-64841063 | None:intergenic | 35.0% | |
| TAATGTCTCAAGTGTCTCTT+TGG | - | chr8_1:64841045-64841064 | None:intergenic | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | + | chr8_1:64841063-64841082 | Msa1207390:CDS | 35.0% | |
| AGCATGGCCTATTAAAGTAT+TGG | + | chr8_1:64841139-64841158 | Msa1207390:CDS | 35.0% | |
| GCTTATTCTGTACATTGCAT+TGG | - | chr8_1:64841168-64841187 | None:intergenic | 35.0% | |
| ! | TGAATAGTGCTATTGAAGAG+AGG | + | chr8_1:64841330-64841349 | Msa1207390:CDS | 35.0% |
| ! | GAATAGTGCTATTGAAGAGA+GGG | + | chr8_1:64841331-64841350 | Msa1207390:CDS | 35.0% |
| TCCAGTGATGATAGTATAGA+GGG | - | chr8_1:64841509-64841528 | None:intergenic | 35.0% | |
| ! | CCAGCTTTTAGTCAATATCT+AGG | - | chr8_1:64841577-64841596 | None:intergenic | 35.0% |
| ! | CCTAGATATTGACTAAAAGC+TGG | + | chr8_1:64841574-64841593 | Msa1207390:exon | 35.0% |
| ! | AGATATTGACTAAAAGCTGG+AGG | + | chr8_1:64841577-64841596 | Msa1207390:exon | 35.0% |
| GTCCTCAATTTCTACTTGGA+AGG | + | chr8_1:64839989-64840008 | Msa1207390:intron | 40.0% | |
| GACCTTCCAAGTAGAAATTG+AGG | - | chr8_1:64839994-64840013 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | + | chr8_1:64840012-64840031 | Msa1207390:intron | 40.0% | |
| ! | TGGTCGGTTAAATTTTGTGC+TGG | + | chr8_1:64840099-64840118 | Msa1207390:intron | 40.0% |
| !! | ATAGTTCAAGTTGCTGCTGT+TGG | + | chr8_1:64840159-64840178 | Msa1207390:intron | 40.0% |
| !! | GTACTATTGCTCCTGCTTTT+AGG | + | chr8_1:64840187-64840206 | Msa1207390:CDS | 40.0% |
| ! | CTACTCCTTTTCCTCACATT+TGG | - | chr8_1:64840240-64840259 | None:intergenic | 40.0% |
| !!! | GAGAGAGTCCGATTAGTTTT+CGG | + | chr8_1:64840313-64840332 | Msa1207390:CDS | 40.0% |
| !!! | AGTCCGATTAGTTTTCGGAT+TGG | + | chr8_1:64840318-64840337 | Msa1207390:CDS | 40.0% |
| ! | AATGGTACAGATTCGGGTTT+AGG | + | chr8_1:64840516-64840535 | Msa1207390:CDS | 40.0% |
| !! | ACTACTCATTGGGTTGAACA+AGG | + | chr8_1:64840633-64840652 | Msa1207390:CDS | 40.0% |
| CACCATGCAAAGGAAGAATT+CGG | - | chr8_1:64840752-64840771 | None:intergenic | 40.0% | |
| GTGTAGAACCTCCATATAGT+TGG | + | chr8_1:64840769-64840788 | Msa1207390:CDS | 40.0% | |
| !!! | CTTTGGGAGTCTTGTTTTGA+AGG | - | chr8_1:64841028-64841047 | None:intergenic | 40.0% |
| TTAAGGTAAGTCCTTCAGCA+TGG | + | chr8_1:64841123-64841142 | Msa1207390:CDS | 40.0% | |
| ACTTTAATAGGCCATGCTGA+AGG | - | chr8_1:64841137-64841156 | None:intergenic | 40.0% | |
| AAGACCATAATACTCGTGAG+AGG | + | chr8_1:64841222-64841241 | Msa1207390:CDS | 40.0% | |
| CCTTTAACAGATATAGCGTG+TGG | - | chr8_1:64841308-64841327 | None:intergenic | 40.0% | |
| CCACACGCTATATCTGTTAA+AGG | + | chr8_1:64841305-64841324 | Msa1207390:CDS | 40.0% | |
| AGAGAAGCAGTTTATGTGCT+TGG | + | chr8_1:64841365-64841384 | Msa1207390:CDS | 40.0% | |
| AAAGAGAGCCTTTCCTAAAG+TGG | + | chr8_1:64841418-64841437 | Msa1207390:CDS | 40.0% | |
| ! | GCAACAATCCACTTTAGGAA+AGG | - | chr8_1:64841429-64841448 | None:intergenic | 40.0% |
| TCCCTCTATACTATCATCAC+TGG | + | chr8_1:64841505-64841524 | Msa1207390:CDS | 40.0% | |
| CTCCAGTGATGATAGTATAG+AGG | - | chr8_1:64841510-64841529 | None:intergenic | 40.0% | |
| CTCTATACTATCATCACTGG+AGG | + | chr8_1:64841508-64841527 | Msa1207390:CDS | 40.0% | |
| CAAATGTCCCTCAATTTAGG+AGG | - | chr8_1:64841554-64841573 | None:intergenic | 40.0% | |
| AGGCAAATGTCCCTCAATTT+AGG | - | chr8_1:64841557-64841576 | None:intergenic | 40.0% | |
| GTCCTCAATTTCTACTTGGA+AGG | + | chr8_1:64839989-64840008 | Msa1207390:intron | 40.0% | |
| GACCTTCCAAGTAGAAATTG+AGG | - | chr8_1:64839994-64840013 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | + | chr8_1:64840012-64840031 | Msa1207390:intron | 40.0% | |
| ! | TGGTCGGTTAAATTTTGTGC+TGG | + | chr8_1:64840099-64840118 | Msa1207390:intron | 40.0% |
| !! | ATAGTTCAAGTTGCTGCTGT+TGG | + | chr8_1:64840159-64840178 | Msa1207390:intron | 40.0% |
| !! | GTACTATTGCTCCTGCTTTT+AGG | + | chr8_1:64840187-64840206 | Msa1207390:CDS | 40.0% |
| ! | CTACTCCTTTTCCTCACATT+TGG | - | chr8_1:64840240-64840259 | None:intergenic | 40.0% |
| !!! | GAGAGAGTCCGATTAGTTTT+CGG | + | chr8_1:64840313-64840332 | Msa1207390:CDS | 40.0% |
| !!! | AGTCCGATTAGTTTTCGGAT+TGG | + | chr8_1:64840318-64840337 | Msa1207390:CDS | 40.0% |
| ! | AATGGTACAGATTCGGGTTT+AGG | + | chr8_1:64840516-64840535 | Msa1207390:CDS | 40.0% |
| !! | ACTACTCATTGGGTTGAACA+AGG | + | chr8_1:64840633-64840652 | Msa1207390:CDS | 40.0% |
| CACCATGCAAAGGAAGAATT+CGG | - | chr8_1:64840752-64840771 | None:intergenic | 40.0% | |
| GTGTAGAACCTCCATATAGT+TGG | + | chr8_1:64840769-64840788 | Msa1207390:CDS | 40.0% | |
| !!! | CTTTGGGAGTCTTGTTTTGA+AGG | - | chr8_1:64841028-64841047 | None:intergenic | 40.0% |
| TTAAGGTAAGTCCTTCAGCA+TGG | + | chr8_1:64841123-64841142 | Msa1207390:CDS | 40.0% | |
| ACTTTAATAGGCCATGCTGA+AGG | - | chr8_1:64841137-64841156 | None:intergenic | 40.0% | |
| AAGACCATAATACTCGTGAG+AGG | + | chr8_1:64841222-64841241 | Msa1207390:CDS | 40.0% | |
| CCTTTAACAGATATAGCGTG+TGG | - | chr8_1:64841308-64841327 | None:intergenic | 40.0% | |
| CCACACGCTATATCTGTTAA+AGG | + | chr8_1:64841305-64841324 | Msa1207390:CDS | 40.0% | |
| AGAGAAGCAGTTTATGTGCT+TGG | + | chr8_1:64841365-64841384 | Msa1207390:CDS | 40.0% | |
| AAAGAGAGCCTTTCCTAAAG+TGG | + | chr8_1:64841418-64841437 | Msa1207390:CDS | 40.0% | |
| ! | GCAACAATCCACTTTAGGAA+AGG | - | chr8_1:64841429-64841448 | None:intergenic | 40.0% |
| TCCCTCTATACTATCATCAC+TGG | + | chr8_1:64841505-64841524 | Msa1207390:CDS | 40.0% | |
| CTCCAGTGATGATAGTATAG+AGG | - | chr8_1:64841510-64841529 | None:intergenic | 40.0% | |
| CTCTATACTATCATCACTGG+AGG | + | chr8_1:64841508-64841527 | Msa1207390:CDS | 40.0% | |
| CAAATGTCCCTCAATTTAGG+AGG | - | chr8_1:64841554-64841573 | None:intergenic | 40.0% | |
| AGGCAAATGTCCCTCAATTT+AGG | - | chr8_1:64841557-64841576 | None:intergenic | 40.0% | |
| GCTTTGCTAGCTGATCATGA+CGG | - | chr8_1:64839576-64839595 | None:intergenic | 45.0% | |
| GCTAATTCCATGCCTTCTCT+TGG | + | chr8_1:64839628-64839647 | Msa1207390:CDS | 45.0% | |
| TTCTGTGTGACACCAAGAGA+AGG | - | chr8_1:64839643-64839662 | None:intergenic | 45.0% | |
| ! | TGGATGATGGCTCATACTAG+CGG | + | chr8_1:64839967-64839986 | Msa1207390:CDS | 45.0% |
| AGCGGTCCTCAATTTCTACT+TGG | + | chr8_1:64839985-64840004 | Msa1207390:intron | 45.0% | |
| !! | CTATTGCTCCTGCTTTTAGG+TGG | + | chr8_1:64840190-64840209 | Msa1207390:CDS | 45.0% |
| GGTGTCCAAATGTGAGGAAA+AGG | + | chr8_1:64840232-64840251 | Msa1207390:CDS | 45.0% | |
| TGTGAGGAAAAGGAGTAGCA+AGG | + | chr8_1:64840242-64840261 | Msa1207390:CDS | 45.0% | |
| GTGAGGAAAAGGAGTAGCAA+GGG | + | chr8_1:64840243-64840262 | Msa1207390:CDS | 45.0% | |
| TAACCGGTGGTTTAGGAAGT+TGG | + | chr8_1:64840341-64840360 | Msa1207390:CDS | 45.0% | |
| TTTCGATTTACCCTATGCGG+TGG | + | chr8_1:64840448-64840467 | Msa1207390:CDS | 45.0% | |
| ! | ACAGATTCGGGTTTAGGAAC+AGG | + | chr8_1:64840522-64840541 | Msa1207390:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | + | chr8_1:64840564-64840583 | Msa1207390:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGTG+AGG | + | chr8_1:64840569-64840588 | Msa1207390:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | + | chr8_1:64840747-64840766 | Msa1207390:CDS | 45.0% | |
| GGAAGTGACCAACTATATGG+AGG | - | chr8_1:64840780-64840799 | None:intergenic | 45.0% | |
| GAGCTGATCTCTATGGAAAG+TGG | + | chr8_1:64840976-64840995 | Msa1207390:CDS | 45.0% | |
| ACAGCCTCTCACGAGTATTA+TGG | - | chr8_1:64841229-64841248 | None:intergenic | 45.0% | |
| ! | TAGTGCTATTGAAGAGAGGG+AGG | + | chr8_1:64841334-64841353 | Msa1207390:CDS | 45.0% |
| AATCTTCGATGTTAGTCCCG+CGG | - | chr8_1:64841451-64841470 | None:intergenic | 45.0% | |
| GGAGGAGAATGACATTTGCA+TGG | + | chr8_1:64841526-64841545 | Msa1207390:CDS | 45.0% | |
| CATGGCTCCTCCTAAATTGA+GGG | + | chr8_1:64841544-64841563 | Msa1207390:CDS | 45.0% | |
| GCTTTGCTAGCTGATCATGA+CGG | - | chr8_1:64839576-64839595 | None:intergenic | 45.0% | |
| GCTAATTCCATGCCTTCTCT+TGG | + | chr8_1:64839628-64839647 | Msa1207390:CDS | 45.0% | |
| TTCTGTGTGACACCAAGAGA+AGG | - | chr8_1:64839643-64839662 | None:intergenic | 45.0% | |
| ! | TGGATGATGGCTCATACTAG+CGG | + | chr8_1:64839967-64839986 | Msa1207390:CDS | 45.0% |
| AGCGGTCCTCAATTTCTACT+TGG | + | chr8_1:64839985-64840004 | Msa1207390:intron | 45.0% | |
| !! | CTATTGCTCCTGCTTTTAGG+TGG | + | chr8_1:64840190-64840209 | Msa1207390:CDS | 45.0% |
| GGTGTCCAAATGTGAGGAAA+AGG | + | chr8_1:64840232-64840251 | Msa1207390:CDS | 45.0% | |
| TGTGAGGAAAAGGAGTAGCA+AGG | + | chr8_1:64840242-64840261 | Msa1207390:CDS | 45.0% | |
| GTGAGGAAAAGGAGTAGCAA+GGG | + | chr8_1:64840243-64840262 | Msa1207390:CDS | 45.0% | |
| TAACCGGTGGTTTAGGAAGT+TGG | + | chr8_1:64840341-64840360 | Msa1207390:CDS | 45.0% | |
| TTTCGATTTACCCTATGCGG+TGG | + | chr8_1:64840448-64840467 | Msa1207390:CDS | 45.0% | |
| ! | ACAGATTCGGGTTTAGGAAC+AGG | + | chr8_1:64840522-64840541 | Msa1207390:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | + | chr8_1:64840564-64840583 | Msa1207390:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGTG+AGG | + | chr8_1:64840569-64840588 | Msa1207390:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | + | chr8_1:64840747-64840766 | Msa1207390:CDS | 45.0% | |
| GGAAGTGACCAACTATATGG+AGG | - | chr8_1:64840780-64840799 | None:intergenic | 45.0% | |
| GAGCTGATCTCTATGGAAAG+TGG | + | chr8_1:64840976-64840995 | Msa1207390:CDS | 45.0% | |
| ACAGCCTCTCACGAGTATTA+TGG | - | chr8_1:64841229-64841248 | None:intergenic | 45.0% | |
| ! | TAGTGCTATTGAAGAGAGGG+AGG | + | chr8_1:64841334-64841353 | Msa1207390:CDS | 45.0% |
| AATCTTCGATGTTAGTCCCG+CGG | - | chr8_1:64841451-64841470 | None:intergenic | 45.0% | |
| GGAGGAGAATGACATTTGCA+TGG | + | chr8_1:64841526-64841545 | Msa1207390:CDS | 45.0% | |
| CATGGCTCCTCCTAAATTGA+GGG | + | chr8_1:64841544-64841563 | Msa1207390:CDS | 45.0% | |
| TGTGACACCAAGAGAAGGCA+TGG | - | chr8_1:64839638-64839657 | None:intergenic | 50.0% | |
| GCAGCAAACCACCTAAAAGC+AGG | - | chr8_1:64840201-64840220 | None:intergenic | 50.0% | |
| !!! | GTTTTCGGATTGGTAACCGG+TGG | + | chr8_1:64840328-64840347 | Msa1207390:CDS | 50.0% |
| ! | GGATTGGTAACCGGTGGTTT+AGG | + | chr8_1:64840334-64840353 | Msa1207390:CDS | 50.0% |
| GAGCCAACTTCCTAAACCAC+CGG | - | chr8_1:64840347-64840366 | None:intergenic | 50.0% | |
| TTACCCTATGCGGTGGATCT+TGG | + | chr8_1:64840455-64840474 | Msa1207390:CDS | 50.0% | |
| TACCCTATGCGGTGGATCTT+GGG | + | chr8_1:64840456-64840475 | Msa1207390:CDS | 50.0% | |
| ATCCCAAGATCCACCGCATA+GGG | - | chr8_1:64840461-64840480 | None:intergenic | 50.0% | |
| AATCCCAAGATCCACCGCAT+AGG | - | chr8_1:64840462-64840481 | None:intergenic | 50.0% | |
| TTTAGGAACAGGCAGAAGGC+AGG | + | chr8_1:64840533-64840552 | Msa1207390:CDS | 50.0% | |
| GCAGAAGGCAGGACCTAAAA+CGG | + | chr8_1:64840544-64840563 | Msa1207390:CDS | 50.0% | |
| TCTCGAAGGTGAGGAAGAGT+TGG | + | chr8_1:64840578-64840597 | Msa1207390:CDS | 50.0% | |
| ! | AGGTGAGGAAGAGTTGGTTG+AGG | + | chr8_1:64840584-64840603 | Msa1207390:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | - | chr8_1:64840762-64840781 | None:intergenic | 50.0% | |
| TGGCATGGAGCTGATCTCTA+TGG | + | chr8_1:64840969-64840988 | Msa1207390:CDS | 50.0% | |
| !! | CCTAAAGTGGATTGTTGCCG+CGG | + | chr8_1:64841431-64841450 | Msa1207390:CDS | 50.0% |
| !! | CTAAAGTGGATTGTTGCCGC+GGG | + | chr8_1:64841432-64841451 | Msa1207390:CDS | 50.0% |
| GCGGGACTAACATCGAAGAT+TGG | + | chr8_1:64841450-64841469 | Msa1207390:CDS | 50.0% | |
| GCATGGCTCCTCCTAAATTG+AGG | + | chr8_1:64841543-64841562 | Msa1207390:CDS | 50.0% | |
| TGTGACACCAAGAGAAGGCA+TGG | - | chr8_1:64839638-64839657 | None:intergenic | 50.0% | |
| GCAGCAAACCACCTAAAAGC+AGG | - | chr8_1:64840201-64840220 | None:intergenic | 50.0% | |
| !!! | GTTTTCGGATTGGTAACCGG+TGG | + | chr8_1:64840328-64840347 | Msa1207390:CDS | 50.0% |
| ! | GGATTGGTAACCGGTGGTTT+AGG | + | chr8_1:64840334-64840353 | Msa1207390:CDS | 50.0% |
| GAGCCAACTTCCTAAACCAC+CGG | - | chr8_1:64840347-64840366 | None:intergenic | 50.0% | |
| TTACCCTATGCGGTGGATCT+TGG | + | chr8_1:64840455-64840474 | Msa1207390:CDS | 50.0% | |
| TACCCTATGCGGTGGATCTT+GGG | + | chr8_1:64840456-64840475 | Msa1207390:CDS | 50.0% | |
| ATCCCAAGATCCACCGCATA+GGG | - | chr8_1:64840461-64840480 | None:intergenic | 50.0% | |
| AATCCCAAGATCCACCGCAT+AGG | - | chr8_1:64840462-64840481 | None:intergenic | 50.0% | |
| TTTAGGAACAGGCAGAAGGC+AGG | + | chr8_1:64840533-64840552 | Msa1207390:CDS | 50.0% | |
| GCAGAAGGCAGGACCTAAAA+CGG | + | chr8_1:64840544-64840563 | Msa1207390:CDS | 50.0% | |
| TCTCGAAGGTGAGGAAGAGT+TGG | + | chr8_1:64840578-64840597 | Msa1207390:CDS | 50.0% | |
| ! | AGGTGAGGAAGAGTTGGTTG+AGG | + | chr8_1:64840584-64840603 | Msa1207390:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | - | chr8_1:64840762-64840781 | None:intergenic | 50.0% | |
| TGGCATGGAGCTGATCTCTA+TGG | + | chr8_1:64840969-64840988 | Msa1207390:CDS | 50.0% | |
| !! | CCTAAAGTGGATTGTTGCCG+CGG | + | chr8_1:64841431-64841450 | Msa1207390:CDS | 50.0% |
| !! | CTAAAGTGGATTGTTGCCGC+GGG | + | chr8_1:64841432-64841451 | Msa1207390:CDS | 50.0% |
| GCGGGACTAACATCGAAGAT+TGG | + | chr8_1:64841450-64841469 | Msa1207390:CDS | 50.0% | |
| GCATGGCTCCTCCTAAATTG+AGG | + | chr8_1:64841543-64841562 | Msa1207390:CDS | 50.0% | |
| GCTAGCTGATCATGACGGTG+AGG | - | chr8_1:64839571-64839590 | None:intergenic | 55.0% | |
| CAAGTTGCTGCTGTTGGCGT+TGG | + | chr8_1:64840165-64840184 | Msa1207390:CDS | 55.0% | |
| CGGGTTTAGGAACAGGCAGA+AGG | + | chr8_1:64840529-64840548 | Msa1207390:CDS | 55.0% | |
| CCGCGGCAACAATCCACTTT+AGG | - | chr8_1:64841434-64841453 | None:intergenic | 55.0% | |
| GCTAGCTGATCATGACGGTG+AGG | - | chr8_1:64839571-64839590 | None:intergenic | 55.0% | |
| CAAGTTGCTGCTGTTGGCGT+TGG | + | chr8_1:64840165-64840184 | Msa1207390:CDS | 55.0% | |
| CGGGTTTAGGAACAGGCAGA+AGG | + | chr8_1:64840529-64840548 | Msa1207390:CDS | 55.0% | |
| CCGCGGCAACAATCCACTTT+AGG | - | chr8_1:64841434-64841453 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 64839565 | 64841616 | 64839565 | ID=Msa1207390;Name=Msa1207390 |
| chr8_1 | mRNA | 64839565 | 64841616 | 64839565 | ID=Msa1207390-mRNA-1;Parent=Msa1207390;Name=Msa1207390-mRNA-1;_AED=0.12;_eAED=0.17;_QI=0|0|0.25|1|0|0|4|27|609 |
| chr8_1 | exon | 64839565 | 64839745 | 64839565 | ID=Msa1207390-mRNA-1:exon:21267;Parent=Msa1207390-mRNA-1 |
| chr8_1 | exon | 64839760 | 64839866 | 64839760 | ID=Msa1207390-mRNA-1:exon:21268;Parent=Msa1207390-mRNA-1 |
| chr8_1 | exon | 64839874 | 64839988 | 64839874 | ID=Msa1207390-mRNA-1:exon:21269;Parent=Msa1207390-mRNA-1 |
| chr8_1 | exon | 64840163 | 64841616 | 64840163 | ID=Msa1207390-mRNA-1:exon:21270;Parent=Msa1207390-mRNA-1 |
| chr8_1 | CDS | 64839565 | 64839745 | 64839565 | ID=Msa1207390-mRNA-1:cds;Parent=Msa1207390-mRNA-1 |
| chr8_1 | CDS | 64839760 | 64839866 | 64839760 | ID=Msa1207390-mRNA-1:cds;Parent=Msa1207390-mRNA-1 |
| chr8_1 | CDS | 64839874 | 64839988 | 64839874 | ID=Msa1207390-mRNA-1:cds;Parent=Msa1207390-mRNA-1 |
| chr8_1 | CDS | 64840163 | 64841589 | 64840163 | ID=Msa1207390-mRNA-1:cds;Parent=Msa1207390-mRNA-1 |
| chr8_1 | three_prime_UTR | 64841590 | 64841616 | 64841590 | ID=Msa1207390-mRNA-1:three_prime_utr;Parent=Msa1207390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
