Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440190 | sp|Q9SXP2|FDH1_ORYSJ | 78.042 | 378 | 48 | 3 | 1 | 353 | 1 | 368 | 0.0 | 582 |
| Msa1440190 | sp|Q9SXP2|FDH1_ORYSJ | 80.737 | 353 | 43 | 2 | 358 | 685 | 24 | 376 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440190 | A0A2R6RYX7 | 74.533 | 750 | 106 | 5 | 21 | 685 | 19 | 768 | 0.0 | 1107 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa1440190 | 0.821589 | 3.725137e-53 | -8.615850e-47 |
| Msa0015090 | Msa1440190 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0016510 | Msa1440190 | 0.860795 | 1.610208e-63 | -8.615850e-47 |
| Msa0020390 | Msa1440190 | 0.836011 | 1.201512e-56 | -8.615850e-47 |
| Msa0038870 | Msa1440190 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa0047460 | Msa1440190 | 0.970182 | 3.134765e-131 | -8.615850e-47 |
| Msa0049750 | Msa1440190 | 0.825743 | 3.969202e-54 | -8.615850e-47 |
| Msa0065950 | Msa1440190 | 0.833520 | 5.087760e-56 | -8.615850e-47 |
| Msa0074750 | Msa1440190 | 0.840230 | 9.852604e-58 | -8.615850e-47 |
| Msa0081650 | Msa1440190 | 0.800361 | 1.494227e-48 | -8.615850e-47 |
| Msa0090550 | Msa1440190 | 0.814263 | 1.684256e-51 | -8.615850e-47 |
| Msa0096980 | Msa1440190 | 0.811561 | 6.583607e-51 | -8.615850e-47 |
| Msa0107400 | Msa1440190 | 0.815753 | 7.865452e-52 | -8.615850e-47 |
| Msa0118540 | Msa1440190 | 0.812571 | 3.964226e-51 | -8.615850e-47 |
| Msa1348850 | Msa1440190 | 0.816005 | 6.912350e-52 | -8.615850e-47 |
| Msa1370590 | Msa1440190 | 0.812840 | 3.462987e-51 | -8.615850e-47 |
| Msa1382020 | Msa1440190 | 0.815573 | 8.625374e-52 | -8.615850e-47 |
| Msa1384100 | Msa1440190 | 0.812153 | 4.891894e-51 | -8.615850e-47 |
| Msa1426910 | Msa1440190 | 0.817313 | 3.517879e-52 | -8.615850e-47 |
| Msa1428780 | Msa1440190 | 0.802879 | 4.550019e-49 | -8.615850e-47 |
| Msa1434040 | Msa1440190 | 0.845476 | 3.966098e-59 | -8.615850e-47 |
| Msa1437330 | Msa1440190 | 0.800923 | 1.147771e-48 | -8.615850e-47 |
| Msa1438840 | Msa1440190 | 0.826413 | 2.750497e-54 | -8.615850e-47 |
| Msa1440190 | Msa1444120 | 0.810583 | 1.072609e-50 | -8.615850e-47 |
| Msa1440190 | Msa1447890 | 0.827497 | 1.514102e-54 | -8.615850e-47 |
| Msa1440190 | Msa1448620 | 0.800013 | 1.758902e-48 | -8.615850e-47 |
| Msa1440190 | Msa1448630 | 0.821697 | 3.517043e-53 | -8.615850e-47 |
| Msa1440190 | Msa1449750 | 0.998748 | 3.675096e-275 | -8.615850e-47 |
| Msa1440190 | Msa1458090 | 0.814133 | 1.799092e-51 | -8.615850e-47 |
| Msa1440190 | Msa1460320 | -0.802949 | 4.400407e-49 | -8.615850e-47 |
| Msa0604290 | Msa1440190 | 0.834433 | 3.005814e-56 | -8.615850e-47 |
| Msa0609220 | Msa1440190 | 0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa0630950 | Msa1440190 | 0.804793 | 1.821803e-49 | -8.615850e-47 |
| Msa0640940 | Msa1440190 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0645530 | Msa1440190 | 0.807540 | 4.809210e-50 | -8.615850e-47 |
| Msa0657120 | Msa1440190 | 0.815041 | 1.132480e-51 | -8.615850e-47 |
| Msa0662630 | Msa1440190 | 0.807052 | 6.100974e-50 | -8.615850e-47 |
| Msa0679360 | Msa1440190 | 0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0682680 | Msa1440190 | 0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa0685090 | Msa1440190 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
| Msa0697720 | Msa1440190 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0701100 | Msa1440190 | 0.815689 | 8.127967e-52 | -8.615850e-47 |
| Msa0709120 | Msa1440190 | 0.851815 | 6.941332e-61 | -8.615850e-47 |
| Msa0727530 | Msa1440190 | 0.812970 | 3.242303e-51 | -8.615850e-47 |
| Msa0732880 | Msa1440190 | 0.832215 | 1.073141e-55 | -8.615850e-47 |
| Msa0765180 | Msa1440190 | 0.830878 | 2.291967e-55 | -8.615850e-47 |
| Msa0773850 | Msa1440190 | 0.813264 | 2.795287e-51 | -8.615850e-47 |
| Msa0789560 | Msa1440190 | 0.828246 | 1.000025e-54 | -8.615850e-47 |
| Msa0812950 | Msa1440190 | 0.811002 | 8.705338e-51 | -8.615850e-47 |
| Msa0139670 | Msa1440190 | 0.852076 | 5.853735e-61 | -8.615850e-47 |
| Msa0145010 | Msa1440190 | 0.819929 | 8.970784e-53 | -8.615850e-47 |
| Msa0146080 | Msa1440190 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa0159420 | Msa1440190 | 0.810991 | 8.753010e-51 | -8.615850e-47 |
| Msa0171980 | Msa1440190 | 0.810555 | 1.087497e-50 | -8.615850e-47 |
| Msa0175840 | Msa1440190 | 0.812589 | 3.929700e-51 | -8.615850e-47 |
| Msa0183870 | Msa1440190 | 0.820483 | 6.696797e-53 | -8.615850e-47 |
| Msa0190250 | Msa1440190 | 0.832053 | 1.177380e-55 | -8.615850e-47 |
| Msa0191070 | Msa1440190 | 0.812775 | 3.576977e-51 | -8.615850e-47 |
| Msa0203110 | Msa1440190 | 0.840982 | 6.261606e-58 | -8.615850e-47 |
| Msa0217670 | Msa1440190 | 0.811901 | 5.551087e-51 | -8.615850e-47 |
| Msa0223330 | Msa1440190 | 0.808855 | 2.523050e-50 | -8.615850e-47 |
| Msa0231790 | Msa1440190 | 0.807903 | 4.026158e-50 | -8.615850e-47 |
| Msa0233370 | Msa1440190 | 0.834569 | 2.778399e-56 | -8.615850e-47 |
| Msa1233850 | Msa1440190 | 0.821935 | 3.098083e-53 | -8.615850e-47 |
| Msa1234620 | Msa1440190 | 0.832146 | 1.116544e-55 | -8.615850e-47 |
| Msa1250530 | Msa1440190 | 0.818571 | 1.828243e-52 | -8.615850e-47 |
| Msa1254620 | Msa1440190 | 0.810098 | 1.364798e-50 | -8.615850e-47 |
| Msa1258980 | Msa1440190 | 0.814959 | 1.181291e-51 | -8.615850e-47 |
| Msa1270730 | Msa1440190 | 0.802551 | 5.316885e-49 | -8.615850e-47 |
| Msa1276150 | Msa1440190 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa1297530 | Msa1440190 | 0.839210 | 1.815641e-57 | -8.615850e-47 |
| Msa1304810 | Msa1440190 | 0.824264 | 8.867981e-54 | -8.615850e-47 |
| Msa1305180 | Msa1440190 | 0.801032 | 1.090046e-48 | -8.615850e-47 |
| Msa1305330 | Msa1440190 | 0.804611 | 1.987562e-49 | -8.615850e-47 |
| Msa1309870 | Msa1440190 | 0.803487 | 3.405005e-49 | -8.615850e-47 |
| Msa1329550 | Msa1440190 | 0.833642 | 4.742712e-56 | -8.615850e-47 |
| Msa1330630 | Msa1440190 | 0.813812 | 2.117999e-51 | -8.615850e-47 |
| Msa0376600 | Msa1440190 | 0.836099 | 1.140926e-56 | -8.615850e-47 |
| Msa0382310 | Msa1440190 | 0.812614 | 3.879659e-51 | -8.615850e-47 |
| Msa0382370 | Msa1440190 | 0.806094 | 9.719556e-50 | -8.615850e-47 |
| Msa0385500 | Msa1440190 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
| Msa0388730 | Msa1440190 | 0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0390530 | Msa1440190 | 0.821292 | 4.362899e-53 | -8.615850e-47 |
| Msa0395980 | Msa1440190 | 0.815433 | 9.268819e-52 | -8.615850e-47 |
| Msa0403490 | Msa1440190 | 0.809748 | 1.623419e-50 | -8.615850e-47 |
| Msa0403770 | Msa1440190 | 0.841112 | 5.789181e-58 | -8.615850e-47 |
| Msa0424050 | Msa1440190 | 0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0431210 | Msa1440190 | 0.823485 | 1.350787e-53 | -8.615850e-47 |
| Msa0479270 | Msa1440190 | 0.808278 | 3.350370e-50 | -8.615850e-47 |
| Msa0994370 | Msa1440190 | 0.818804 | 1.619259e-52 | -8.615850e-47 |
| Msa1006710 | Msa1440190 | 0.826421 | 2.738681e-54 | -8.615850e-47 |
| Msa1013070 | Msa1440190 | 0.828876 | 7.046640e-55 | -8.615850e-47 |
| Msa1023180 | Msa1440190 | 0.817056 | 4.018424e-52 | -8.615850e-47 |
| Msa1026640 | Msa1440190 | 0.835096 | 2.047672e-56 | -8.615850e-47 |
| Msa1028190 | Msa1440190 | 0.823784 | 1.149273e-53 | -8.615850e-47 |
| Msa1037520 | Msa1440190 | 0.802454 | 5.567193e-49 | -8.615850e-47 |
| Msa1042660 | Msa1440190 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa1043050 | Msa1440190 | 0.814490 | 1.500701e-51 | -8.615850e-47 |
| Msa1054510 | Msa1440190 | 0.810804 | 9.605974e-51 | -8.615850e-47 |
| Msa1066810 | Msa1440190 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa1072900 | Msa1440190 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
| Msa1077070 | Msa1440190 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
| Msa1082360 | Msa1440190 | 0.800297 | 1.539857e-48 | -8.615850e-47 |
| Msa1094280 | Msa1440190 | 0.804562 | 2.035760e-49 | -8.615850e-47 |
| Msa0244970 | Msa1440190 | 0.826845 | 2.169435e-54 | -8.615850e-47 |
| Msa0244980 | Msa1440190 | 0.818446 | 1.952479e-52 | -8.615850e-47 |
| Msa0246250 | Msa1440190 | 0.815668 | 8.214661e-52 | -8.615850e-47 |
| Msa0257490 | Msa1440190 | 0.839632 | 1.410778e-57 | -8.615850e-47 |
| Msa0269470 | Msa1440190 | 0.801006 | 1.103751e-48 | -8.615850e-47 |
| Msa0283420 | Msa1440190 | 0.842235 | 2.926108e-58 | -8.615850e-47 |
| Msa0284820 | Msa1440190 | 0.837588 | 4.757469e-57 | -8.615850e-47 |
| Msa0296790 | Msa1440190 | 0.832920 | 7.175270e-56 | -8.615850e-47 |
| Msa0296920 | Msa1440190 | 0.805205 | 1.493802e-49 | -8.615850e-47 |
| Msa0311720 | Msa1440190 | 0.809586 | 1.758236e-50 | -8.615850e-47 |
| Msa0320430 | Msa1440190 | 0.808785 | 2.610591e-50 | -8.615850e-47 |
| Msa0321690 | Msa1440190 | 0.833312 | 5.732593e-56 | -8.615850e-47 |
| Msa0323560 | Msa1440190 | 0.821731 | 3.453930e-53 | -8.615850e-47 |
| Msa1112250 | Msa1440190 | 0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa1123350 | Msa1440190 | 0.808153 | 3.561732e-50 | -8.615850e-47 |
| Msa1127430 | Msa1440190 | 0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa1150710 | Msa1440190 | 0.819754 | 9.836511e-53 | -8.615850e-47 |
| Msa1178580 | Msa1440190 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa1201640 | Msa1440190 | 0.807947 | 3.941222e-50 | -8.615850e-47 |
| Msa1205480 | Msa1440190 | 0.813424 | 2.577709e-51 | -8.615850e-47 |
| Msa1205590 | Msa1440190 | 0.852278 | 5.125915e-61 | -8.615850e-47 |
| Msa1206100 | Msa1440190 | 0.830129 | 3.493249e-55 | -8.615850e-47 |
| Msa1206270 | Msa1440190 | 0.827446 | 1.557908e-54 | -8.615850e-47 |
| Msa1206290 | Msa1440190 | 0.820161 | 7.938848e-53 | -8.615850e-47 |
| Msa1208380 | Msa1440190 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa1208790 | Msa1440190 | 0.820702 | 5.964829e-53 | -8.615850e-47 |
| Msa1209190 | Msa1440190 | 0.817511 | 3.175081e-52 | -8.615850e-47 |
| Msa1209670 | Msa1440190 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0482940 | Msa1440190 | 0.808039 | 3.767607e-50 | -8.615850e-47 |
| Msa0491000 | Msa1440190 | 0.812690 | 3.734750e-51 | -8.615850e-47 |
| Msa0510840 | Msa1440190 | 0.827190 | 1.793947e-54 | -8.615850e-47 |
| Msa0518170 | Msa1440190 | 0.824378 | 8.340205e-54 | -8.615850e-47 |
| Msa0520270 | Msa1440190 | 0.827315 | 1.674723e-54 | -8.615850e-47 |
| Msa0527740 | Msa1440190 | 0.844448 | 7.512150e-59 | -8.615850e-47 |
| Msa0534010 | Msa1440190 | 0.808115 | 3.629455e-50 | -8.615850e-47 |
| Msa0534410 | Msa1440190 | 0.806891 | 6.598873e-50 | -8.615850e-47 |
| Msa0542290 | Msa1440190 | 0.806055 | 9.903868e-50 | -8.615850e-47 |
| Msa0542560 | Msa1440190 | 0.828633 | 8.064997e-55 | -8.615850e-47 |
| Msa0547160 | Msa1440190 | 0.811231 | 7.762704e-51 | -8.615850e-47 |
| Msa0560500 | Msa1440190 | 0.809104 | 2.231255e-50 | -8.615850e-47 |
| Msa0561240 | Msa1440190 | 0.809460 | 1.871520e-50 | -8.615850e-47 |
| Msa0566350 | Msa1440190 | 0.801741 | 7.802523e-49 | -8.615850e-47 |
| Msa0588240 | Msa1440190 | 0.809727 | 1.640508e-50 | -8.615850e-47 |
| Msa0590020 | Msa1440190 | 0.808826 | 2.559091e-50 | -8.615850e-47 |
| Msa0600450 | Msa1440190 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0844610 | Msa1440190 | 0.806829 | 6.801433e-50 | -8.615850e-47 |
| Msa0872440 | Msa1440190 | 0.822552 | 2.228494e-53 | -8.615850e-47 |
| Msa0934840 | Msa1440190 | 0.991531 | 3.791246e-188 | -8.615850e-47 |
| Msa0971160 | Msa1440190 | 0.805696 | 1.178439e-49 | -8.615850e-47 |
| Msa0971850 | Msa1440190 | 0.939018 | 2.566708e-99 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440190 | MtrunA17_Chr6g0450811 | 92.593 | 378 | 3 | 2 | 1 | 353 | 1 | 378 | 0.0 | 704 |
| Msa1440190 | MtrunA17_Chr6g0450811 | 85.873 | 361 | 26 | 2 | 350 | 685 | 26 | 386 | 0.0 | 634 |
| Msa1440190 | MtrunA17_Chr6g0450821 | 86.158 | 354 | 5 | 3 | 357 | 685 | 3 | 337 | 0.0 | 592 |
| Msa1440190 | MtrunA17_Chr6g0450821 | 79.310 | 348 | 28 | 3 | 31 | 353 | 1 | 329 | 0.0 | 539 |
| Msa1440190 | MtrunA17_Chr3g0077771 | 28.235 | 255 | 148 | 5 | 116 | 335 | 112 | 366 | 6.35e-18 | 86.3 |
| Msa1440190 | MtrunA17_Chr4g0000511 | 27.642 | 246 | 149 | 7 | 122 | 342 | 152 | 393 | 1.11e-16 | 84.0 |
| Msa1440190 | MtrunA17_Chr4g0000511 | 26.531 | 245 | 153 | 5 | 446 | 666 | 152 | 393 | 1.85e-16 | 83.2 |
| Msa1440190 | MtrunA17_Chr1g0208141 | 29.268 | 246 | 145 | 7 | 122 | 342 | 119 | 360 | 1.00e-15 | 80.9 |
| Msa1440190 | MtrunA17_Chr1g0208141 | 28.163 | 245 | 149 | 6 | 446 | 666 | 119 | 360 | 2.37e-15 | 79.7 |
| Msa1440190 | MtrunA17_Chr8g0351111 | 26.482 | 253 | 158 | 6 | 111 | 339 | 65 | 313 | 1.89e-15 | 78.2 |
| Msa1440190 | MtrunA17_Chr8g0351111 | 27.381 | 252 | 157 | 6 | 435 | 663 | 65 | 313 | 1.24e-14 | 75.5 |
| Msa1440190 | MtrunA17_Chr4g0004711 | 26.255 | 259 | 151 | 9 | 113 | 342 | 59 | 306 | 1.63e-13 | 72.0 |
| Msa1440190 | MtrunA17_Chr4g0004711 | 25.296 | 253 | 159 | 8 | 438 | 666 | 60 | 306 | 1.93e-13 | 72.0 |
| Msa1440190 | MtrunA17_Chr4g0004721 | 24.911 | 281 | 169 | 9 | 91 | 342 | 40 | 307 | 3.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440190 | AT5G14780.2 | 76.423 | 369 | 60 | 3 | 342 | 685 | 4 | 370 | 0.0 | 539 |
| Msa1440190 | AT5G14780.2 | 77.746 | 346 | 52 | 2 | 33 | 353 | 17 | 362 | 0.0 | 521 |
| Msa1440190 | AT5G14780.1 | 77.716 | 359 | 55 | 2 | 352 | 685 | 26 | 384 | 0.0 | 538 |
| Msa1440190 | AT5G14780.1 | 74.142 | 379 | 69 | 4 | 1 | 353 | 1 | 376 | 0.0 | 525 |
| Msa1440190 | AT5G14780.3 | 78.592 | 355 | 51 | 2 | 356 | 685 | 4 | 358 | 0.0 | 538 |
| Msa1440190 | AT5G14780.3 | 77.746 | 346 | 52 | 2 | 33 | 353 | 5 | 350 | 0.0 | 521 |
| Msa1440190 | AT1G72190.1 | 30.213 | 235 | 132 | 5 | 116 | 320 | 110 | 342 | 1.35e-18 | 88.6 |
| Msa1440190 | AT1G72190.1 | 27.208 | 283 | 167 | 8 | 392 | 644 | 69 | 342 | 3.69e-18 | 87.4 |
| Msa1440190 | AT1G17745.1 | 27.599 | 279 | 170 | 9 | 90 | 342 | 115 | 387 | 2.74e-17 | 86.3 |
| Msa1440190 | AT1G17745.1 | 27.626 | 257 | 158 | 7 | 435 | 666 | 134 | 387 | 4.02e-17 | 85.9 |
| Msa1440190 | AT4G34200.1 | 28.455 | 246 | 147 | 7 | 122 | 342 | 125 | 366 | 1.68e-15 | 80.5 |
| Msa1440190 | AT4G34200.1 | 27.347 | 245 | 151 | 6 | 446 | 666 | 125 | 366 | 4.11e-15 | 79.3 |
| Msa1440190 | AT1G17745.2 | 25.902 | 305 | 169 | 10 | 90 | 342 | 115 | 414 | 4.12e-15 | 79.7 |
| Msa1440190 | AT1G17745.2 | 25.442 | 283 | 158 | 8 | 435 | 666 | 134 | 414 | 1.96e-14 | 77.4 |
| Msa1440190 | AT3G19480.1 | 26.531 | 245 | 155 | 4 | 445 | 666 | 109 | 351 | 1.11e-14 | 78.2 |
| Msa1440190 | AT3G19480.1 | 27.935 | 247 | 149 | 7 | 121 | 342 | 109 | 351 | 1.21e-14 | 77.8 |
| Msa1440190 | AT1G12550.1 | 26.957 | 230 | 147 | 7 | 435 | 644 | 64 | 292 | 3.61e-12 | 68.6 |
| Msa1440190 | AT1G12550.1 | 25.287 | 261 | 170 | 7 | 81 | 320 | 36 | 292 | 1.60e-11 | 66.6 |
| Msa1440190 | AT1G79870.1 | 26.378 | 254 | 161 | 8 | 113 | 344 | 59 | 308 | 4.06e-12 | 68.2 |
| Msa1440190 | AT1G79870.1 | 26.295 | 251 | 159 | 8 | 440 | 668 | 62 | 308 | 8.04e-12 | 67.4 |
Find 178 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACACATCCAACAAAAT+TGG | 0.150781 | tig0029037:+31355 | None:intergenic |
| TTCAACACATCCAACAAAAT+TGG | 0.168585 | tig0029037:+26823 | None:intergenic |
| TATGCTTGAGAGGCACTTTA+AGG | 0.176399 | tig0029037:-24946 | Msa1440190:CDS |
| TATGCTTGAGAGGCACTTTA+AGG | 0.176399 | tig0029037:-29409 | Msa1440190:CDS |
| AATATATGTAAAATTCTTAT+TGG | 0.179143 | tig0029037:+33540 | None:intergenic |
| ATATAAAAGGTTACAGTTAA+AGG | 0.184451 | tig0029037:+26241 | None:intergenic |
| CCAATTTCTTTCTCCAATTC+AGG | 0.191495 | tig0029037:+26197 | None:intergenic |
| CCAATTTCTTTCTCCAATTC+AGG | 0.196911 | tig0029037:+30634 | None:intergenic |
| CAATGCTCGTGGGGCGATTA+TGG | 0.210159 | tig0029037:-25909 | Msa1440190:CDS |
| ATATAAAAGGTTACAGTTAA+AGG | 0.223160 | tig0029037:+30678 | None:intergenic |
| GCTATGACTCCTCATATTTC+TGG | 0.232371 | tig0029037:-30052 | Msa1440190:CDS |
| GCGATGACTCCTCATATTTC+TGG | 0.233071 | tig0029037:-25610 | Msa1440190:CDS |
| CAATGCTCGTGGAGCACTTA+TGG | 0.246792 | tig0029037:-30282 | Msa1440190:CDS |
| CTCAATGCTGCGGCTGCTGC+TGG | 0.282556 | tig0029037:-30928 | Msa1440190:CDS |
| CTCAACGCTGCGGCTGCTGC+TGG | 0.289747 | tig0029037:-26491 | Msa1440190:CDS |
| TAGCGCCATGGATGATCTTT+TGG | 0.296464 | tig0029037:+25646 | None:intergenic |
| TAGCGCCATGGATGATCTTT+TGG | 0.296464 | tig0029037:+30088 | None:intergenic |
| CCTGAATTGGAGAAAGAAAT+TGG | 0.310313 | tig0029037:-26197 | Msa1440190:CDS |
| AGTTAAAGGGTTTCAGCCTT+TGG | 0.316924 | tig0029037:+26255 | None:intergenic |
| AGTTAAAGGGTTTCAGCCTT+TGG | 0.316924 | tig0029037:+30692 | None:intergenic |
| CCTGAATTGGAGAAAGAAAT+TGG | 0.319944 | tig0029037:-30634 | Msa1440190:CDS |
| TATAAAAGGTTACAGTTAAA+GGG | 0.334347 | tig0029037:+26242 | None:intergenic |
| TTCACAATGTAATGCTGTTC+AGG | 0.337030 | tig0029037:+24912 | None:intergenic |
| GGTGAAATGGTGTGGATATC+AGG | 0.337349 | tig0029037:+31037 | None:intergenic |
| TCAACACATCCAACAAAATT+GGG | 0.339618 | tig0029037:+26824 | None:intergenic |
| TTCACAATGTAGTTCTGTTC+AGG | 0.343342 | tig0029037:+29375 | None:intergenic |
| CGCTTTCTTAATTCTTTCCT+CGG | 0.344856 | tig0029037:+26565 | None:intergenic |
| ACTTAAGATGGCGCCTGAAT+TGG | 0.345074 | tig0029037:-30647 | Msa1440190:CDS |
| TAAGTCTATCATGATATAAA+AGG | 0.348710 | tig0029037:+26228 | None:intergenic |
| TAAGTCTATCGTGATATAAA+AGG | 0.348710 | tig0029037:+30665 | None:intergenic |
| ACGGTCGGTGCTGGACGAAT+TGG | 0.352979 | tig0029037:-30727 | Msa1440190:CDS |
| ATATATGTAAAATTCTTATT+GGG | 0.353999 | tig0029037:+33541 | None:intergenic |
| GGTTACAAGCAGGCTGTTGC+CGG | 0.355403 | tig0029037:-26374 | Msa1440190:intron |
| GACAAAGAAGGACTCAATTC+TGG | 0.356342 | tig0029037:-31272 | Msa1440190:intron |
| TATAAAAGGTTACAGTTAAA+GGG | 0.356684 | tig0029037:+30679 | None:intergenic |
| TGTTCTAGTGGACACGTTGC+AGG | 0.363087 | tig0029037:-30236 | Msa1440190:intron |
| GACAAAGAAGGACCTGATTC+TGG | 0.363375 | tig0029037:-26740 | Msa1440190:intron |
| TAGGTTACAGTGGTGATGTT+TGG | 0.375068 | tig0029037:-25684 | Msa1440190:CDS |
| TAGGTTACAGTGGTGATGTT+TGG | 0.375068 | tig0029037:-30126 | Msa1440190:CDS |
| ATCGGTATTGGCTTGCCAAT+TGG | 0.378591 | tig0029037:+24883 | None:intergenic |
| AGCAAGAAAGGGAGAGGAGT+TGG | 0.382551 | tig0029037:-33497 | Msa1440190:five_prime_UTR |
| GATACTACATTCATCGGTAT+TGG | 0.383983 | tig0029037:+24871 | None:intergenic |
| CTTTCCTCGGTGACATAGGC+AGG | 0.386770 | tig0029037:+26578 | None:intergenic |
| TCAAAATTCTAACCAGAATC+AGG | 0.393287 | tig0029037:+26728 | None:intergenic |
| TCAACACATCCAACAAAATT+GGG | 0.405718 | tig0029037:+31356 | None:intergenic |
| CGTCTTTCCTTCAAGATCAT+AGG | 0.406591 | tig0029037:+26319 | None:intergenic |
| ACTTAAGATGGAGCCTGAAT+TGG | 0.406632 | tig0029037:-26210 | Msa1440190:CDS |
| CATTGTGAAGCAGGGCCAAT+TGG | 0.415484 | tig0029037:-24898 | Msa1440190:CDS |
| GGTGAAATGGTGTAGATATC+AGG | 0.417800 | tig0029037:+26600 | None:intergenic |
| TGTCTTTCCTTCAAGATCAT+AGG | 0.421953 | tig0029037:+30756 | None:intergenic |
| ACCGGAGAATGGAATGTTGC+TGG | 0.422186 | tig0029037:-30793 | Msa1440190:CDS |
| TCCAACAAAATTGGGATTCA+AGG | 0.426930 | tig0029037:+31364 | None:intergenic |
| CGGTCGGTGCTGGACGAATT+GGG | 0.430059 | tig0029037:-30726 | Msa1440190:CDS |
| ATATCATGATAGACTTAAGA+TGG | 0.430838 | tig0029037:-26222 | Msa1440190:CDS |
| ATAAACTACCTGTGCATCAA+TGG | 0.432079 | tig0029037:+30024 | None:intergenic |
| GGTTACCATCAGGCTATTAC+CGG | 0.432378 | tig0029037:-30811 | Msa1440190:intron |
| ACAGTTGGTGCTGGACGAAT+CGG | 0.436838 | tig0029037:-26290 | Msa1440190:CDS |
| TATTATTGAGAATAGGCATC+TGG | 0.440836 | tig0029037:-26905 | Msa1440190:intron |
| CACCTTCTTCCATCATCACC+AGG | 0.440843 | tig0029037:-33218 | Msa1440190:CDS |
| AGCAGGCTGTTGCCGGAGAA+TGG | 0.441500 | tig0029037:-26367 | Msa1440190:intron |
| CTGCTTCTAACCGCCGGCAT+TGG | 0.441881 | tig0029037:-30967 | Msa1440190:CDS |
| CATAGAGCCTATGATCTTGA+AGG | 0.442532 | tig0029037:-26326 | Msa1440190:CDS |
| CATAGAGCCTATGATCTTGA+AGG | 0.442532 | tig0029037:-30763 | Msa1440190:CDS |
| TGAGGAGTCATCGCATGGTT+TGG | 0.445585 | tig0029037:+25619 | None:intergenic |
| GGAGAGGAGTTGGAAGGAAA+GGG | 0.449862 | tig0029037:-33487 | Msa1440190:five_prime_UTR |
| GGATGTGTTGAAGGAGCATT+AGG | 0.450524 | tig0029037:-26812 | Msa1440190:CDS |
| GGATGTGTTGAAGGAGCATT+AGG | 0.450524 | tig0029037:-31344 | Msa1440190:CDS |
| TGTACTAGTGGACACATTGC+AGG | 0.452738 | tig0029037:-25863 | Msa1440190:intron |
| GGGAGAGGAGTTGGAAGGAA+AGG | 0.454236 | tig0029037:-33488 | Msa1440190:five_prime_UTR |
| ATGCTTGAGAGGCACTTTAA+GGG | 0.454740 | tig0029037:-24945 | Msa1440190:CDS |
| ATGCTTGAGAGGCACTTTAA+GGG | 0.454740 | tig0029037:-29408 | Msa1440190:CDS |
| ATAAACAACCTGTGCATCAA+TGG | 0.455572 | tig0029037:+25582 | None:intergenic |
| GGAGGAAAGAAGAAAATTGT+AGG | 0.456151 | tig0029037:-26884 | Msa1440190:CDS |
| TGAGGAGTCATAGCATGATT+AGG | 0.459588 | tig0029037:+30061 | None:intergenic |
| TTTATGTCATTAAGTTGAAT+CGG | 0.462170 | tig0029037:+33596 | None:intergenic |
| GGTGGAAAGAAGAAGATTGT+AGG | 0.462288 | tig0029037:-31416 | Msa1440190:CDS |
| CTTTCCGCAGTGACATAGGC+AGG | 0.464618 | tig0029037:+31015 | None:intergenic |
| TGTTGTTGAGAATAGGCCTC+TGG | 0.466148 | tig0029037:-31437 | Msa1440190:intron |
| CTTTGAAGAAGCAGTGATCA+AGG | 0.467599 | tig0029037:+33257 | None:intergenic |
| ACAGTTGGAACGGTCGGTGC+TGG | 0.468606 | tig0029037:-30736 | Msa1440190:CDS |
| ATATCACGATAGACTTAAGA+TGG | 0.470085 | tig0029037:-30659 | Msa1440190:CDS |
| GTGACATAGGCAGGGTGAAA+TGG | 0.470645 | tig0029037:+26587 | None:intergenic |
| GTGACATAGGCAGGGTGAAA+TGG | 0.470645 | tig0029037:+31024 | None:intergenic |
| GCCGGAGAATGGAATGTTGC+TGG | 0.480317 | tig0029037:-26356 | Msa1440190:CDS |
| GTTCAGTTACGTTATGCTGC+TGG | 0.487635 | tig0029037:-24978 | Msa1440190:intron |
| ACAGCATTACATTGTGAAGC+AGG | 0.492555 | tig0029037:-24907 | Msa1440190:CDS |
| GATATCAGGACATGCAGATC+GGG | 0.492666 | tig0029037:+26614 | None:intergenic |
| ATGAAGGTCCCTGGTGATGA+TGG | 0.493616 | tig0029037:+33209 | None:intergenic |
| ATCAGGCTATTACCGGAGAA+TGG | 0.493947 | tig0029037:-30804 | Msa1440190:intron |
| GCCAGCAACATTCCATTCTC+CGG | 0.495643 | tig0029037:+30792 | None:intergenic |
| TGGAACTACCATTGATGCAC+AGG | 0.501814 | tig0029037:-25590 | Msa1440190:intron |
| ACCAGCAACATTCCATTCTC+CGG | 0.501972 | tig0029037:+26355 | None:intergenic |
| ATTGCTGATGCTTGTTCTAG+TGG | 0.505145 | tig0029037:-30248 | Msa1440190:CDS |
| AATTCTTTCCTCGGTGACAT+AGG | 0.513371 | tig0029037:+26574 | None:intergenic |
| AGAATTGCTAAGTTGAAGAA+AGG | 0.514648 | tig0029037:-30320 | Msa1440190:CDS |
| AGAAATTGGAGCTCAGTTTG+AGG | 0.516756 | tig0029037:-30620 | Msa1440190:CDS |
| AATTCTTTCCGCAGTGACAT+AGG | 0.516858 | tig0029037:+31011 | None:intergenic |
| GGAAAGACGGTTGGAACAGT+TGG | 0.521323 | tig0029037:-26305 | Msa1440190:CDS |
| TTGATTGTTAACAATGCTCG+TGG | 0.521418 | tig0029037:-25920 | Msa1440190:CDS |
| GATATCAGGACATTGAGATC+AGG | 0.531388 | tig0029037:+31051 | None:intergenic |
| CAGTTGGTGCTGGACGAATC+GGG | 0.533028 | tig0029037:-26289 | Msa1440190:CDS |
| GTTCAGTTACGTTATGCTGC+TGG | 0.533638 | tig0029037:-29441 | Msa1440190:intron |
| TGGAACCACCATTGATGCAC+AGG | 0.536965 | tig0029037:-30032 | Msa1440190:intron |
| AGAAATTGGAGCTCAGTTTG+AGG | 0.537059 | tig0029037:-26183 | Msa1440190:CDS |
| TTAGAGCTGCTTCTAACCGC+CGG | 0.540077 | tig0029037:-30973 | Msa1440190:CDS |
| CACAGGAAGCAACGTAGTAT+CGG | 0.541220 | tig0029037:-26450 | Msa1440190:CDS |
| TGAGAGGCACTTTAAGGGTG+AGG | 0.541517 | tig0029037:-24940 | Msa1440190:CDS |
| TGATTGTTAACAATGCTCGT+GGG | 0.541593 | tig0029037:-25919 | Msa1440190:CDS |
| AGAATCGCTAAGTTGAAGAA+AGG | 0.545413 | tig0029037:-25947 | Msa1440190:CDS |
| TAACTTAACCTGAGTGAGGA+AGG | 0.546381 | tig0029037:+33459 | None:intergenic |
| TTAACTGTCGCAGAGGTCAC+AGG | 0.552581 | tig0029037:-30904 | Msa1440190:CDS |
| ACGGTTGGAACAGTTGGTGC+TGG | 0.553144 | tig0029037:-26299 | Msa1440190:CDS |
| GATCTTGAAGGAAAGACGGT+TGG | 0.556559 | tig0029037:-26314 | Msa1440190:CDS |
| GATCTTGAAGGAAAGACAGT+TGG | 0.556559 | tig0029037:-30751 | Msa1440190:CDS |
| AGAAAGGGAGAGGAGTTGGA+AGG | 0.559805 | tig0029037:-33493 | Msa1440190:five_prime_UTR |
| AATGTGATCAGAACCAATGC+CGG | 0.563596 | tig0029037:+30954 | None:intergenic |
| TTAACCGTCGCAGAGGTCAC+AGG | 0.565278 | tig0029037:-26467 | Msa1440190:CDS |
| ACATCCAACAAAATTGGGGT+TGG | 0.565621 | tig0029037:+26829 | None:intergenic |
| GTTGCTGATGCTTGTACTAG+TGG | 0.565800 | tig0029037:-25875 | Msa1440190:CDS |
| ATTAGGTATACGCGAGTGGT+TGG | 0.567034 | tig0029037:-31327 | Msa1440190:CDS |
| ACTTTGGTAGCATTGTATCA+AGG | 0.567924 | tig0029037:+26156 | None:intergenic |
| CAGCTCCAAAAGATCATCCA+TGG | 0.568481 | tig0029037:-25651 | Msa1440190:CDS |
| CAGCTCCAAAAGATCATCCA+TGG | 0.568481 | tig0029037:-30093 | Msa1440190:CDS |
| TGAGCTTACATGAAGGTCCC+TGG | 0.575307 | tig0029037:+33200 | None:intergenic |
| AGATATCAGGACATGCAGAT+CGG | 0.580334 | tig0029037:+26613 | None:intergenic |
| ATTGTCACTGATGACAAAGA+AGG | 0.582437 | tig0029037:-31284 | Msa1440190:CDS |
| GGAAAGACAGTTGGAACGGT+CGG | 0.583686 | tig0029037:-30742 | Msa1440190:CDS |
| GGGTAAAGCCTTCCTCACTC+AGG | 0.595514 | tig0029037:-33467 | Msa1440190:intron |
| TTTCATCTTATAGGTTACAG+TGG | 0.595880 | tig0029037:-25694 | Msa1440190:intron |
| ATTGTAGGTGTGTTCTACAA+AGG | 0.596743 | tig0029037:-26869 | Msa1440190:CDS |
| AATCTTCTTCTTTCCACCAG+AGG | 0.597365 | tig0029037:+31421 | None:intergenic |
| ATTGTCACAGATGACAAAGA+AGG | 0.604616 | tig0029037:-26752 | Msa1440190:CDS |
| CAACGTAGTATCGGTTGCTG+AGG | 0.609487 | tig0029037:-26441 | Msa1440190:CDS |
| ACAGAACTACATTGTGAAGG+AGG | 0.610756 | tig0029037:-29370 | Msa1440190:CDS |
| GCTTCCTGTGACCTCTGCGA+CGG | 0.611055 | tig0029037:+26463 | None:intergenic |
| AGCGTTGAGATCAATGTGAT+CGG | 0.612699 | tig0029037:+26505 | None:intergenic |
| TGATTAGGCATGTAGCGCCA+TGG | 0.614868 | tig0029037:+30076 | None:intergenic |
| CTATGATCTTGAAGGAAAGA+CGG | 0.616356 | tig0029037:-26318 | Msa1440190:CDS |
| CAACACTGTGTCGGTTGCTG+AGG | 0.618658 | tig0029037:-30878 | Msa1440190:CDS |
| CGCGAGTGGTTGGAATCACA+AGG | 0.620030 | tig0029037:-31317 | Msa1440190:CDS |
| CAACACATCCAACAAAATTG+GGG | 0.620958 | tig0029037:+26825 | None:intergenic |
| ATGGTAGTTCCAGAAATATG+AGG | 0.623567 | tig0029037:+25601 | None:intergenic |
| GAGTCAAAGATATGCTTGAG+AGG | 0.624367 | tig0029037:-24956 | Msa1440190:CDS |
| GAGTCAAAGATATGCTTGAG+AGG | 0.624367 | tig0029037:-29419 | Msa1440190:CDS |
| CAGCATTACATTGTGAAGCA+GGG | 0.632429 | tig0029037:-24906 | Msa1440190:CDS |
| AACTACCTGTGCATCAATGG+TGG | 0.632641 | tig0029037:+30027 | None:intergenic |
| TATTGAGAATAGGCATCTGG+AGG | 0.633472 | tig0029037:-26902 | Msa1440190:intron |
| TGGTTTGGCATGTAGCGCCA+TGG | 0.634567 | tig0029037:+25634 | None:intergenic |
| ATTGTAGGTGTGTTCTACAA+AGG | 0.635031 | tig0029037:-31401 | Msa1440190:CDS |
| GATTGTTAACAATGCTCGTG+GGG | 0.635440 | tig0029037:-25918 | Msa1440190:CDS |
| CGCGAGTGGCTTGAATCACA+AGG | 0.636363 | tig0029037:-26785 | Msa1440190:CDS |
| CACAGGAAGCAACACTGTGT+CGG | 0.636460 | tig0029037:-30887 | Msa1440190:CDS |
| TTTCCTCGGTGACATAGGCA+GGG | 0.636732 | tig0029037:+26579 | None:intergenic |
| TTTCCGCAGTGACATAGGCA+GGG | 0.641235 | tig0029037:+31016 | None:intergenic |
| TTGATTGTCAACAATGCTCG+TGG | 0.642232 | tig0029037:-30293 | Msa1440190:CDS |
| AATTGGAGCTCAGTTTGAGG+AGG | 0.645215 | tig0029037:-30617 | Msa1440190:CDS |
| TGTTGAGAATAGGCCTCTGG+TGG | 0.646139 | tig0029037:-31434 | Msa1440190:intron |
| AAATATGAGGAGTCATCGCA+TGG | 0.646699 | tig0029037:+25614 | None:intergenic |
| CAGAACTACATTGTGAAGGA+GGG | 0.646841 | tig0029037:-29369 | Msa1440190:intron |
| TCCCTGGTGATGATGGAAGA+AGG | 0.649337 | tig0029037:+33216 | None:intergenic |
| TGAACAGAACTACATTGTGA+AGG | 0.650943 | tig0029037:-29373 | Msa1440190:CDS |
| TGAAGGAAAGACAGTTGGAA+CGG | 0.651639 | tig0029037:-30746 | Msa1440190:CDS |
| ACCTTCTTCCATCATCACCA+GGG | 0.652169 | tig0029037:-33217 | Msa1440190:CDS |
| GAGCATTAGGTATACGCGAG+TGG | 0.657382 | tig0029037:-26799 | Msa1440190:CDS |
| TGCTGGTTTAACCGTCGCAG+AGG | 0.660243 | tig0029037:-26474 | Msa1440190:CDS |
| TGCTTAACTTAACCTGAGTG+AGG | 0.662618 | tig0029037:+33455 | None:intergenic |
| ATAGGCAGGGTGAAATGGTG+TGG | 0.663821 | tig0029037:+31029 | None:intergenic |
| GAGCATTAGGTATACGCGAG+TGG | 0.665851 | tig0029037:-31331 | Msa1440190:CDS |
| TCACATTGATCTCAATGCTG+CGG | 0.666935 | tig0029037:-30938 | Msa1440190:CDS |
| TGCTGGTTTAACTGTCGCAG+AGG | 0.668788 | tig0029037:-30911 | Msa1440190:CDS |
| GTTTCATCTATAGGTTACAG+TGG | 0.672760 | tig0029037:-30136 | Msa1440190:intron |
| GTAGGTGTGTTCTACAAAGG+CGG | 0.684274 | tig0029037:-31398 | Msa1440190:CDS |
| ATGGTGGTTCCAGAAATATG+AGG | 0.685776 | tig0029037:+30043 | None:intergenic |
| GTGATCAGAACCAATGCCGG+CGG | 0.702688 | tig0029037:+30957 | None:intergenic |
| GTTGAATCGGCTATGTGATG+AGG | 0.710161 | tig0029037:+33609 | None:intergenic |
| TCACCCTGCCTATGTCACTG+CGG | 0.753926 | tig0029037:-31019 | Msa1440190:CDS |
| TCACATTGATCTCAACGCTG+CGG | 0.771896 | tig0029037:-26501 | Msa1440190:CDS |
| TCACCCTGCCTATGTCACCG+AGG | 0.774835 | tig0029037:-26582 | Msa1440190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATGTAAAATTCTTATT+GGG | + | tig0029037:25015-25034 | None:intergenic | 10.0% |
| !! | AATATATGTAAAATTCTTAT+TGG | + | tig0029037:25016-25035 | None:intergenic | 10.0% |
| !!! | TAGTATAATCATTATATTTT+TGG | - | tig0029037:26317-26336 | Msa1440190:CDS | 10.0% |
| !!! | AGTATAATCATTATATTTTT+GGG | - | tig0029037:26318-26337 | Msa1440190:CDS | 10.0% |
| !! | TTTCAAAAAAAAAAAAAGTA+GGG | + | tig0029037:26489-26508 | None:intergenic | 10.0% |
| !! | TCAATATTAATATTTCATAT+TGG | + | tig0029037:30166-30185 | None:intergenic | 10.0% |
| !! | TTTAGTTAAAAATATGAAAA+TGG | + | tig0029037:30482-30501 | None:intergenic | 10.0% |
| !! | AAAAATTAAAAAACACAAAA+AGG | + | tig0029037:31140-31159 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAATCTAAAGTAT+TGG | - | tig0029037:33245-33264 | Msa1440190:CDS | 10.0% |
| !!! | TTTTTAAAATCTAAAGTATT+GGG | - | tig0029037:33246-33265 | Msa1440190:CDS | 10.0% |
| !! | TTAAATTAAAAAAGCAAGAA+AGG | - | tig0029037:25044-25063 | Msa1440190:intron | 15.0% |
| !! | TAAATTAAAAAAGCAAGAAA+GGG | - | tig0029037:25045-25064 | Msa1440190:intron | 15.0% |
| !! | AAACAAAAATTGTTTGAAAA+TGG | - | tig0029037:25252-25271 | Msa1440190:intron | 15.0% |
| !! | TTATTCCACAAAATTTAAAA+GGG | + | tig0029037:26244-26263 | None:intergenic | 15.0% |
| !! | TTTATTCCACAAAATTTAAA+AGG | + | tig0029037:26245-26264 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTGGAATAAAAT+TGG | - | tig0029037:26247-26266 | Msa1440190:CDS | 15.0% |
| !! | TGCATACATTTATTTAATAA+TGG | + | tig0029037:26288-26307 | None:intergenic | 15.0% |
| !! | ATAATGATTATACTAATGTA+GGG | + | tig0029037:26312-26331 | None:intergenic | 15.0% |
| !! | TATAATGATTATACTAATGT+AGG | + | tig0029037:26313-26332 | None:intergenic | 15.0% |
| !!! | TGGAATATGTTTAATTTTTT+GGG | - | tig0029037:26387-26406 | Msa1440190:intron | 15.0% |
| !!! | TTTAATTTTTTGGGTAAAAT+GGG | - | tig0029037:26396-26415 | Msa1440190:intron | 15.0% |
| !! | CTTTCAAAAAAAAAAAAAGT+AGG | + | tig0029037:26490-26509 | None:intergenic | 15.0% |
| !!! | TTCATATCTAATTTTTTGTT+GGG | - | tig0029037:26695-26714 | Msa1440190:intron | 15.0% |
| !!! | TAAATTTTGTTAGTCATTTT+AGG | + | tig0029037:26953-26972 | None:intergenic | 15.0% |
| !!! | TACGATTTTAAACATTTTTT+CGG | - | tig0029037:27372-27391 | Msa1440190:intron | 15.0% |
| !! | GATTGAAACTAAAATAAATA+CGG | - | tig0029037:28923-28942 | Msa1440190:intron | 15.0% |
| !!! | ATCTTTATTTAGTAATTCAT+TGG | + | tig0029037:29284-29303 | None:intergenic | 15.0% |
| !!! | GATAAATATTTTCAATTGAA+AGG | + | tig0029037:29456-29475 | None:intergenic | 15.0% |
| !! | TCAATTGAAAATATTTATCA+TGG | - | tig0029037:29457-29476 | Msa1440190:intron | 15.0% |
| !!! | TTATAAATGGTCTTATAATT+AGG | + | tig0029037:30045-30064 | None:intergenic | 15.0% |
| !!! | AGAGAAACAATTTTTATAAA+TGG | + | tig0029037:30058-30077 | None:intergenic | 15.0% |
| !!! | ATTTTGTTGTTTCTTTTTAT+GGG | - | tig0029037:30614-30633 | Msa1440190:CDS | 15.0% |
| !!! | TGTAATTTTGATACATTTAA+CGG | - | tig0029037:26979-26998 | Msa1440190:intron | 15.0% |
| !! | TTCTCAATAATAACAAAAAA+TGG | + | tig0029037:31640-31659 | None:intergenic | 15.0% |
| !!! | TTTTTGTTATTATTGAGAAT+AGG | - | tig0029037:31641-31660 | Msa1440190:intron | 15.0% |
| !!! | TTTAAGATAAAGTTTTAAGA+GGG | + | tig0029037:31863-31882 | None:intergenic | 15.0% |
| !!! | TTTTAAGATAAAGTTTTAAG+AGG | + | tig0029037:31864-31883 | None:intergenic | 15.0% |
| !!! | AACTTTATCTTAAAAGTTTT+TGG | - | tig0029037:31869-31888 | Msa1440190:intron | 15.0% |
| !! | TACTATTATTGATCTATTAA+CGG | - | tig0029037:32474-32493 | Msa1440190:intron | 15.0% |
| !!! | TTTATGTCATTAAGTTGAAT+CGG | + | tig0029037:24960-24979 | None:intergenic | 20.0% |
| !! | CTTAATTTCATTCAATCATT+TGG | - | tig0029037:25390-25409 | Msa1440190:intron | 20.0% |
| !!! | CTTTTAAAAATGAGTCTTAA+CGG | - | tig0029037:25738-25757 | Msa1440190:intron | 20.0% |
| !! | AATAATGCATAATATATGCA+AGG | + | tig0029037:25819-25838 | None:intergenic | 20.0% |
| !! | TTAGACCTTATGTTTAATTA+AGG | - | tig0029037:25906-25925 | Msa1440190:CDS | 20.0% |
| !! | TAGACCTTATGTTTAATTAA+GGG | - | tig0029037:25907-25926 | Msa1440190:CDS | 20.0% |
| !! | TATTCCACAAAATTTAAAAG+GGG | + | tig0029037:26243-26262 | None:intergenic | 20.0% |
| !! | ATATTCCACAAAATTAGAAA+GGG | + | tig0029037:26375-26394 | None:intergenic | 20.0% |
| !!! | GTGGAATATGTTTAATTTTT+TGG | - | tig0029037:26386-26405 | Msa1440190:intron | 20.0% |
| !!! | GTTTAATTTTTTGGGTAAAA+TGG | - | tig0029037:26395-26414 | Msa1440190:intron | 20.0% |
| !!! | TACATGATATTTAACTTCAT+TGG | + | tig0029037:26584-26603 | None:intergenic | 20.0% |
| !!! | AACAATTGTTTGATTTCATT+GGG | + | tig0029037:26619-26638 | None:intergenic | 20.0% |
| !!! | TAACAATTGTTTGATTTCAT+TGG | + | tig0029037:26620-26639 | None:intergenic | 20.0% |
| !! | GAAATCAAACAATTGTTAAT+TGG | - | tig0029037:26622-26641 | Msa1440190:CDS | 20.0% |
| !! | CAACAAAAAATTAGATATGA+AGG | + | tig0029037:26696-26715 | None:intergenic | 20.0% |
| !!! | CTTCATATCTAATTTTTTGT+TGG | - | tig0029037:26694-26713 | Msa1440190:intron | 20.0% |
| !!! | ACTTTATGGATTAAATTGAT+CGG | - | tig0029037:26900-26919 | Msa1440190:intron | 20.0% |
| !! | CATATATTCAGATATCAAAA+TGG | - | tig0029037:27019-27038 | Msa1440190:intron | 20.0% |
| !! | TATAAAAGGTTACAGTTAAA+GGG | + | tig0029037:27877-27896 | None:intergenic | 20.0% |
| !! | ATATAAAAGGTTACAGTTAA+AGG | + | tig0029037:27878-27897 | None:intergenic | 20.0% |
| !! | CAAACTAGAAATTAAGATAA+AGG | + | tig0029037:28576-28595 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAGGAAAACTAT+AGG | - | tig0029037:28660-28679 | Msa1440190:intron | 20.0% |
| !!! | TAATTTTGAGGAAAACTATA+GGG | - | tig0029037:28661-28680 | Msa1440190:intron | 20.0% |
| !!! | ATAATTTTGAATCATGAGTT+AGG | + | tig0029037:29678-29697 | None:intergenic | 20.0% |
| !! | ATACATCTAAAAATTTGTAG+AGG | + | tig0029037:30092-30111 | None:intergenic | 20.0% |
| !! | AAATGAAACCAAGAAATAAA+CGG | + | tig0029037:30286-30305 | None:intergenic | 20.0% |
| !! | AATATGAAAATGGATCAAAA+CGG | + | tig0029037:30472-30491 | None:intergenic | 20.0% |
| !!! | ATAATGATGTGACATATTTT+AGG | - | tig0029037:30505-30524 | Msa1440190:intron | 20.0% |
| !!! | GGAATTTTATTGTAATTTCA+TGG | + | tig0029037:30576-30595 | None:intergenic | 20.0% |
| !!! | CATTTTGTTGTTTCTTTTTA+TGG | - | tig0029037:30613-30632 | Msa1440190:CDS | 20.0% |
| !!! | AAATTTTATAGTGTACAGAT+AGG | + | tig0029037:31008-31027 | None:intergenic | 20.0% |
| !! | TGTCATATCATTATAAATTG+AGG | - | tig0029037:31197-31216 | Msa1440190:intron | 20.0% |
| !! | GTCATATCATTATAAATTGA+GGG | - | tig0029037:31198-31217 | Msa1440190:intron | 20.0% |
| !! | ATCAGATAATTAGAAAACTT+AGG | - | tig0029037:31301-31320 | Msa1440190:CDS | 20.0% |
| !! | ATGTTATAGATTAAACTGAT+CGG | - | tig0029037:31440-31459 | Msa1440190:intron | 20.0% |
| !! | TATACATTCAGATATCAAAA+TGG | - | tig0029037:31556-31575 | Msa1440190:intron | 20.0% |
| !! | TATAAAAGGTTACAGTTAAA+GGG | + | tig0029037:27877-27896 | None:intergenic | 20.0% |
| !! | ATATAAAAGGTTACAGTTAA+AGG | + | tig0029037:27878-27897 | None:intergenic | 20.0% |
| !! | TAAGTCTATCATGATATAAA+AGG | + | tig0029037:32328-32347 | None:intergenic | 20.0% |
| !! | TAAATTATACCTTGTCTTAT+CGG | + | tig0029037:32453-32472 | None:intergenic | 20.0% |
| !! | ACTCATAGTTTACATATAAA+TGG | + | tig0029037:32524-32543 | None:intergenic | 20.0% |
| !! | GAAACTAGAAATTAAGATAA+AGG | + | tig0029037:33022-33041 | None:intergenic | 20.0% |
| ! | AAAACAAAAAAACTTGAAGG+AGG | + | tig0029037:24921-24940 | None:intergenic | 25.0% |
| ! | TGCAAAACAAAAAAACTTGA+AGG | + | tig0029037:24924-24943 | None:intergenic | 25.0% |
| !!! | CGTTAAGACTCATTTTTAAA+AGG | + | tig0029037:25740-25759 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTTTTTGTGAC+CGG | - | tig0029037:25778-25797 | Msa1440190:intron | 25.0% |
| ! | ATAGCCCTTAATTAAACATA+AGG | + | tig0029037:25914-25933 | None:intergenic | 25.0% |
| !! | TATATACATGCTGATTACAT+GGG | - | tig0029037:25931-25950 | Msa1440190:CDS | 25.0% |
| !!! | TCCGTGCATTATTTTTTTTA+AGG | - | tig0029037:26018-26037 | Msa1440190:intron | 25.0% |
| ! | CCCTTAAAAAAAATAATGCA+CGG | + | tig0029037:26022-26041 | None:intergenic | 25.0% |
| !!! | CCGTGCATTATTTTTTTTAA+GGG | - | tig0029037:26019-26038 | Msa1440190:intron | 25.0% |
| ! | ATTCCACAAAATTTAAAAGG+GGG | + | tig0029037:26242-26261 | None:intergenic | 25.0% |
| ! | TATTCCACAAAATTAGAAAG+GGG | + | tig0029037:26374-26393 | None:intergenic | 25.0% |
| ! | CATATTCCACAAAATTAGAA+AGG | + | tig0029037:26376-26395 | None:intergenic | 25.0% |
| !!! | CTTGTCTAGAACTAAATTTT+TGG | - | tig0029037:26525-26544 | Msa1440190:CDS | 25.0% |
| !!! | ATTTTTTGTTGGGAAAAATC+TGG | - | tig0029037:26705-26724 | Msa1440190:intron | 25.0% |
| !! | TTAAATGTGTGAAGCATTAT+CGG | - | tig0029037:26847-26866 | Msa1440190:CDS | 25.0% |
| !!! | CTCTTTTGTTTGTAACTTTA+TGG | - | tig0029037:26886-26905 | Msa1440190:CDS | 25.0% |
| !! | CTTTATGGATTAAATTGATC+GGG | - | tig0029037:26901-26920 | Msa1440190:intron | 25.0% |
| !!! | TTTTTTCTGTTGTTGAGAAT+AGG | - | tig0029037:27109-27128 | Msa1440190:intron | 25.0% |
| ! | TAAGTCTATCGTGATATAAA+AGG | + | tig0029037:27891-27910 | None:intergenic | 25.0% |
| !! | TTGAAATCTGAAGTCTATAA+GGG | - | tig0029037:28073-28092 | Msa1440190:intron | 25.0% |
| ! | ATTCCAATATCAAAATGACT+TGG | - | tig0029037:28106-28125 | Msa1440190:intron | 25.0% |
| !!! | AAACCAAGTCATTTTGATAT+TGG | + | tig0029037:28112-28131 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTTGTGATTCAG+AGG | - | tig0029037:28194-28213 | Msa1440190:intron | 25.0% |
| ! | ATGAAAAGAGAGAGAATTTA+AGG | + | tig0029037:28606-28625 | None:intergenic | 25.0% |
| !! | GCTCTTAAATGATAATTTTG+AGG | - | tig0029037:28649-28668 | Msa1440190:intron | 25.0% |
| !! | GTCTAAAACATTAACAATGT+TGG | + | tig0029037:28891-28910 | None:intergenic | 25.0% |
| ! | TTACTAAATAAAGATATCCG+CGG | - | tig0029037:29289-29308 | Msa1440190:intron | 25.0% |
| ! | CTTGTTTAATAAAACTGCAA+TGG | - | tig0029037:29349-29368 | Msa1440190:intron | 25.0% |
| !!! | TGAGTTTGAATACCTTTTTT+AGG | - | tig0029037:29537-29556 | Msa1440190:intron | 25.0% |
| !!! | ATTCTTTTGGATTAGAGATT+TGG | + | tig0029037:29877-29896 | None:intergenic | 25.0% |
| ! | TTTCATATTGGAAGACAAAT+TGG | + | tig0029037:30154-30173 | None:intergenic | 25.0% |
| ! | AATGAAACCAAGAAATAAAC+GGG | + | tig0029037:30285-30304 | None:intergenic | 25.0% |
| !!! | CGGTATGATTTTAAAATTGA+GGG | + | tig0029037:30452-30471 | None:intergenic | 25.0% |
| !!! | ACGGTATGATTTTAAAATTG+AGG | + | tig0029037:30453-30472 | None:intergenic | 25.0% |
| ! | AGTTCATCATACTGTATTTA+CGG | + | tig0029037:30723-30742 | None:intergenic | 25.0% |
| ! | TGAGTGAAGTTTGAAAAAAA+TGG | - | tig0029037:30821-30840 | Msa1440190:intron | 25.0% |
| !! | TTACCTTTTATCTTTGTTCT+AGG | - | tig0029037:30853-30872 | Msa1440190:CDS | 25.0% |
| ! | AATCCTAGAACAAAGATAAA+AGG | + | tig0029037:30859-30878 | None:intergenic | 25.0% |
| !! | TTGATTTGATTGTCTAAACA+CGG | - | tig0029037:30906-30925 | Msa1440190:CDS | 25.0% |
| ! | TTATAAATTGAGGGAAAATG+TGG | - | tig0029037:31207-31226 | Msa1440190:intron | 25.0% |
| ! | TATAAATTGAGGGAAAATGT+GGG | - | tig0029037:31208-31227 | Msa1440190:intron | 25.0% |
| ! | AAAATCGCCTAAATATATCA+AGG | - | tig0029037:31271-31290 | Msa1440190:intron | 25.0% |
| ! | AAATCGCCTAAATATATCAA+GGG | - | tig0029037:31272-31291 | Msa1440190:intron | 25.0% |
| ! | AGATAATTAGAAAACTTAGG+AGG | - | tig0029037:31304-31323 | Msa1440190:CDS | 25.0% |
| !! | AGCTTTAATGTTATCATCTA+CGG | - | tig0029037:31342-31361 | Msa1440190:CDS | 25.0% |
| !!! | TTTTAGTCTTTTAATGTGTG+AGG | - | tig0029037:31376-31395 | Msa1440190:CDS | 25.0% |
| ! | ATACATAAATACCGAGTAAA+CGG | + | tig0029037:31582-31601 | None:intergenic | 25.0% |
| ! | ATATCATGATAGACTTAAGA+TGG | - | tig0029037:32331-32350 | Msa1440190:intron | 25.0% |
| ! | AGTTTACATATAAATGGACA+TGG | + | tig0029037:32518-32537 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTTGTGATTCAG+AGG | - | tig0029037:28194-28213 | Msa1440190:intron | 25.0% |
| !!! | AACAAATTATTTTTGACAGC+TGG | + | tig0029037:32727-32746 | None:intergenic | 25.0% |
| ! | ATTACTTCAAAGTTCAAACA+TGG | + | tig0029037:32827-32846 | None:intergenic | 25.0% |
| !! | ACAATCTTGTTCATCAATTT+TGG | - | tig0029037:33370-33389 | Msa1440190:intron | 25.0% |
| !!! | ATTAGCATACCTTTTTTCTT+TGG | - | tig0029037:33475-33494 | Msa1440190:five_prime_UTR | 25.0% |
| ! | AAAAATGGAGAAAATGTAGT+CGG | + | tig0029037:33521-33540 | None:intergenic | 25.0% |
| ! | CAGTAATTTACGCAAAAAAA+TGG | + | tig0029037:33536-33555 | None:intergenic | 25.0% |
| AAAAGATTGAGCTTACATGA+AGG | + | tig0029037:25363-25382 | None:intergenic | 30.0% | |
| TAAGAACTCAAAAGAAGCTT+TGG | - | tig0029037:25507-25526 | Msa1440190:intron | 30.0% | |
| !!! | GTGTTTTTTTTTTTGTGACC+GGG | - | tig0029037:25779-25798 | Msa1440190:intron | 30.0% |
| !!! | TGTTTTTTTTTTTGTGACCG+GGG | - | tig0029037:25780-25799 | Msa1440190:intron | 30.0% |
| !!! | AAGGTTTTGAATTTAAACCC+CGG | + | tig0029037:25800-25819 | None:intergenic | 30.0% |
| ! | CTATATACATGCTGATTACA+TGG | - | tig0029037:25930-25949 | Msa1440190:CDS | 30.0% |
| TTCCACAAAATTTAAAAGGG+GGG | + | tig0029037:26241-26260 | None:intergenic | 30.0% | |
| TTGTGGAATAAAATTGGTGT+AGG | - | tig0029037:26253-26272 | Msa1440190:CDS | 30.0% | |
| TGTGGAATAAAATTGGTGTA+GGG | - | tig0029037:26254-26273 | Msa1440190:CDS | 30.0% | |
| !!! | AATTTTTTGGGTAAAATGGG+AGG | - | tig0029037:26399-26418 | Msa1440190:intron | 30.0% |
| ATTTCATTGGGTGAAAAAAC+TGG | + | tig0029037:26607-26626 | None:intergenic | 30.0% | |
| GAAATGTTAGATGAAACTGA+CGG | + | tig0029037:26659-26678 | None:intergenic | 30.0% | |
| TCAACACATCCAACAAAATT+GGG | + | tig0029037:27200-27219 | None:intergenic | 30.0% | |
| TTCAACACATCCAACAAAAT+TGG | + | tig0029037:27201-27220 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGGATGTGTTGA+AGG | - | tig0029037:27200-27219 | Msa1440190:intron | 30.0% |
| !! | AATAAGAGGGTGGATTAATT+TGG | + | tig0029037:27318-27337 | None:intergenic | 30.0% |
| ATATCACGATAGACTTAAGA+TGG | - | tig0029037:27894-27913 | Msa1440190:intron | 30.0% | |
| ATAACAATAATGTCGCACTT+CGG | + | tig0029037:27979-27998 | None:intergenic | 30.0% | |
| ! | CTTGAAATCTGAAGTCTATA+AGG | - | tig0029037:28072-28091 | Msa1440190:intron | 30.0% |
| ! | AGAATTGCTAAGTTGAAGAA+AGG | - | tig0029037:28233-28252 | Msa1440190:intron | 30.0% |
| AAACTATAGGGTCATATACT+AGG | - | tig0029037:28673-28692 | Msa1440190:intron | 30.0% | |
| !!! | GGCATTCTAAAACAGTTTTT+TGG | + | tig0029037:28870-28889 | None:intergenic | 30.0% |
| CGTTAAACTGGTTAAGATAA+AGG | - | tig0029037:28956-28975 | Msa1440190:intron | 30.0% | |
| AGAAGTTAACCAAAGAACAA+GGG | + | tig0029037:29037-29056 | None:intergenic | 30.0% | |
| AAGAAGTTAACCAAAGAACA+AGG | + | tig0029037:29038-29057 | None:intergenic | 30.0% | |
| ATACATAGAGTTGCAACATA+AGG | - | tig0029037:29600-29619 | Msa1440190:intron | 30.0% | |
| AACATAAGGTCTTAAGTTTG+AGG | - | tig0029037:29614-29633 | Msa1440190:intron | 30.0% | |
| GAGTTAGGTCATGTAATAAA+AGG | + | tig0029037:29663-29682 | None:intergenic | 30.0% | |
| AAGTCTACTACTTACTACTT+TGG | - | tig0029037:29821-29840 | Msa1440190:intron | 30.0% | |
| CGTATACATCAAGAGTAATT+TGG | - | tig0029037:30191-30210 | Msa1440190:intron | 30.0% | |
| ! | TATTTGACCCGTTTATTTCT+TGG | - | tig0029037:30275-30294 | Msa1440190:CDS | 30.0% |
| ! | ACTCTGCTTTCTTTTTATGT+TGG | - | tig0029037:30382-30401 | Msa1440190:intron | 30.0% |
| ! | AATGTGCAGAAGAATTTTCA+AGG | + | tig0029037:30597-30616 | None:intergenic | 30.0% |
| ACATCACATTTCTTTCTTCT+TGG | - | tig0029037:30773-30792 | Msa1440190:CDS | 30.0% | |
| !! | CTTTGTTCTAGGATTAAGTT+TGG | - | tig0029037:30864-30883 | Msa1440190:CDS | 30.0% |
| AAAATGACGTACAGATGAAA+GGG | - | tig0029037:31072-31091 | Msa1440190:intron | 30.0% | |
| ATCATGAAATTGCACAATTG+AGG | - | tig0029037:31235-31254 | Msa1440190:intron | 30.0% | |
| AATCGCCTAAATATATCAAG+GGG | - | tig0029037:31273-31292 | Msa1440190:CDS | 30.0% | |
| TTTGACCCCTTGATATATTT+AGG | + | tig0029037:31281-31300 | None:intergenic | 30.0% | |
| GCTTTAATGTTATCATCTAC+GGG | - | tig0029037:31343-31362 | Msa1440190:CDS | 30.0% | |
| ! | TTTAATGTGTGAGGCATTAT+CGG | - | tig0029037:31385-31404 | Msa1440190:CDS | 30.0% |
| TATTATTGAGAATAGGCATC+TGG | - | tig0029037:31648-31667 | Msa1440190:intron | 30.0% | |
| TCAACACATCCAACAAAATT+GGG | + | tig0029037:27200-27219 | None:intergenic | 30.0% | |
| TTCAACACATCCAACAAAAT+TGG | + | tig0029037:27201-27220 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGGATGTGTTGA+AGG | - | tig0029037:27200-27219 | Msa1440190:intron | 30.0% |
| TCAAAATTCTAACCAGAATC+AGG | + | tig0029037:31828-31847 | None:intergenic | 30.0% | |
| ! | AAAAAAGTTTGCTCATTGCT+AGG | + | tig0029037:32551-32570 | None:intergenic | 30.0% |
| CAGAAACATAAATGAAATCG+AGG | + | tig0029037:32790-32809 | None:intergenic | 30.0% | |
| TTTCATCTTATAGGTTACAG+TGG | - | tig0029037:32859-32878 | Msa1440190:intron | 30.0% | |
| AAATCTGAAAAATTCCGATC+TGG | + | tig0029037:33209-33228 | None:intergenic | 30.0% | |
| TAGTTTCTACAACAGGTTTA+GGG | + | tig0029037:33417-33436 | None:intergenic | 30.0% | |
| TTAGTTTCTACAACAGGTTT+AGG | + | tig0029037:33418-33437 | None:intergenic | 30.0% | |
| ! | AACAGTTTAGTTTCTACAAC+AGG | + | tig0029037:33424-33443 | None:intergenic | 30.0% |
| TGAACTTAGCCAAAGAAAAA+AGG | + | tig0029037:33487-33506 | None:intergenic | 30.0% | |
| TAAAAAAGCAAGAAAGGGAG+AGG | - | tig0029037:25050-25069 | Msa1440190:intron | 35.0% | |
| TGAAACGTGAAGAGTAAAGA+GGG | + | tig0029037:25178-25197 | None:intergenic | 35.0% | |
| TCTCATTGTTCTTTGAGCTT+AGG | + | tig0029037:25857-25876 | None:intergenic | 35.0% | |
| AATGAGAGAGTGAGTGTTAT+TGG | - | tig0029037:25870-25889 | Msa1440190:CDS | 35.0% | |
| CAAAATTTAAAAGGGGGGTT+TGG | + | tig0029037:26236-26255 | None:intergenic | 35.0% | |
| ! | AACCCCCCTTTTAAATTTTG+TGG | - | tig0029037:26236-26255 | Msa1440190:CDS | 35.0% |
| ! | TCATCCCCTTTCTAATTTTG+TGG | - | tig0029037:26367-26386 | Msa1440190:intron | 35.0% |
| CATTTCATCCCTGCAATTAT+AGG | + | tig0029037:26457-26476 | None:intergenic | 35.0% | |
| ACAAGCATACATAAGAGACA+AGG | + | tig0029037:27052-27071 | None:intergenic | 35.0% | |
| ATTGTAGGTGTGTTCTACAA+AGG | - | tig0029037:27152-27171 | Msa1440190:intron | 35.0% | |
| ! | TCCTTGAATCCCAATTTTGT+TGG | - | tig0029037:27188-27207 | Msa1440190:intron | 35.0% |
| TCCAACAAAATTGGGATTCA+AGG | + | tig0029037:27192-27211 | None:intergenic | 35.0% | |
| ATTGTCACTGATGACAAAGA+AGG | - | tig0029037:27269-27288 | Msa1440190:intron | 35.0% | |
| TGAGAATTCTCATTCTTGTG+AGG | - | tig0029037:27707-27726 | Msa1440190:intron | 35.0% | |
| TGTCTTTCCTTCAAGATCAT+AGG | + | tig0029037:27800-27819 | None:intergenic | 35.0% | |
| ! | TTGGGAAACTTTTACTCCAA+AGG | - | tig0029037:27845-27864 | Msa1440190:intron | 35.0% |
| CCAATTTCTTTCTCCAATTC+AGG | + | tig0029037:27922-27941 | None:intergenic | 35.0% | |
| CCTGAATTGGAGAAAGAAAT+TGG | - | tig0029037:27919-27938 | Msa1440190:intron | 35.0% | |
| ! | GAAACACATTTTATGTCAGC+TGG | + | tig0029037:28354-28373 | None:intergenic | 35.0% |
| AACACCTGAGTTTCATCTAT+AGG | - | tig0029037:28408-28427 | Msa1440190:intron | 35.0% | |
| GTAACCTATAGATGAAACTC+AGG | + | tig0029037:28415-28434 | None:intergenic | 35.0% | |
| GTTTCATCTATAGGTTACAG+TGG | - | tig0029037:28417-28436 | Msa1440190:intron | 35.0% | |
| ATAAACTACCTGTGCATCAA+TGG | + | tig0029037:28532-28551 | None:intergenic | 35.0% | |
| ACAAACAAGGACACAAACAA+TGG | + | tig0029037:28784-28803 | None:intergenic | 35.0% | |
| GTATCTATGAAGCACAAACA+AGG | + | tig0029037:28797-28816 | None:intergenic | 35.0% | |
| GGAAATGAGTAACGTTAAAC+TGG | - | tig0029037:28944-28963 | Msa1440190:intron | 35.0% | |
| ! | TTCACAATGTAGTTCTGTTC+AGG | + | tig0029037:29181-29200 | None:intergenic | 35.0% |
| TGAACAGAACTACATTGTGA+AGG | - | tig0029037:29180-29199 | Msa1440190:intron | 35.0% | |
| !! | TTCTGAGTCTTGTGGTTTTA+AGG | - | tig0029037:29258-29277 | Msa1440190:intron | 35.0% |
| AGTACATTATTACAATGCCG+CGG | + | tig0029037:29309-29328 | None:intergenic | 35.0% | |
| ! | TTCTGAAAGATGACATCTTG+TGG | + | tig0029037:29492-29511 | None:intergenic | 35.0% |
| TGAGTTCTCTAGCCTAAAAA+AGG | + | tig0029037:29552-29571 | None:intergenic | 35.0% | |
| ! | TAAGGTCTTAAGTTTGAGGT+TGG | - | tig0029037:29618-29637 | Msa1440190:intron | 35.0% |
| CTTCAAATTGCTGAAAGACA+GGG | + | tig0029037:29912-29931 | None:intergenic | 35.0% | |
| ! | TCTTTCAGCAATTTGAAGCT+TGG | - | tig0029037:29914-29933 | Msa1440190:intron | 35.0% |
| ! | TCTGTTTTCGCTCATGAAAT+TGG | - | tig0029037:30425-30444 | Msa1440190:intron | 35.0% |
| GTCAATAATCTCACATCATC+AGG | + | tig0029037:30551-30570 | None:intergenic | 35.0% | |
| !! | ACTTTTTCCTCCCAAATGTT+TGG | - | tig0029037:30650-30669 | Msa1440190:CDS | 35.0% |
| ! | TGCTTTTGGACCAAACATTT+GGG | + | tig0029037:30663-30682 | None:intergenic | 35.0% |
| ! | ATGCTTTTGGACCAAACATT+TGG | + | tig0029037:30664-30683 | None:intergenic | 35.0% |
| AAATGTTTGGTCCAAAAGCA+TGG | - | tig0029037:30663-30682 | Msa1440190:CDS | 35.0% | |
| ATGTAGTTCAAGCACAAGAA+AGG | + | tig0029037:30757-30776 | None:intergenic | 35.0% | |
| GAAAATGACGTACAGATGAA+AGG | - | tig0029037:31071-31090 | Msa1440190:CDS | 35.0% | |
| ! | ATTGGTAATATCCATGCATG+AGG | - | tig0029037:31163-31182 | Msa1440190:intron | 35.0% |
| TATCAAAATGGCCGTTTACT+CGG | - | tig0029037:31568-31587 | Msa1440190:intron | 35.0% | |
| GGAGGAAAGAAGAAAATTGT+AGG | - | tig0029037:31669-31688 | Msa1440190:intron | 35.0% | |
| ATTGTAGGTGTGTTCTACAA+AGG | - | tig0029037:27152-27171 | Msa1440190:intron | 35.0% | |
| CAACACATCCAACAAAATTG+GGG | + | tig0029037:27199-27218 | None:intergenic | 35.0% | |
| ATTGTCACAGATGACAAAGA+AGG | - | tig0029037:31801-31820 | Msa1440190:intron | 35.0% | |
| CGCTTTCTTAATTCTTTCCT+CGG | + | tig0029037:31991-32010 | None:intergenic | 35.0% | |
| !!! | TTACAGTTGCTTTTAACTGC+TGG | - | tig0029037:32017-32036 | Msa1440190:intron | 35.0% |
| CTATGATCTTGAAGGAAAGA+CGG | - | tig0029037:27798-27817 | Msa1440190:intron | 35.0% | |
| CCAATTTCTTTCTCCAATTC+AGG | + | tig0029037:27922-27941 | None:intergenic | 35.0% | |
| CCTGAATTGGAGAAAGAAAT+TGG | - | tig0029037:27919-27938 | Msa1440190:intron | 35.0% | |
| ! | ACTTTGGTAGCATTGTATCA+AGG | + | tig0029037:32400-32419 | None:intergenic | 35.0% |
| ATAACAACTATGTCGCACTT+TGG | + | tig0029037:32416-32435 | None:intergenic | 35.0% | |
| ! | AGAATCGCTAAGTTGAAGAA+AGG | - | tig0029037:32606-32625 | Msa1440190:intron | 35.0% |
| TTGATTGTTAACAATGCTCG+TGG | - | tig0029037:32633-32652 | Msa1440190:intron | 35.0% | |
| TGATTGTTAACAATGCTCGT+GGG | - | tig0029037:32634-32653 | Msa1440190:intron | 35.0% | |
| ACAGCTGAGTTTCATCTTAT+AGG | - | tig0029037:32850-32869 | Msa1440190:intron | 35.0% | |
| ATGGTAGTTCCAGAAATATG+AGG | + | tig0029037:32955-32974 | None:intergenic | 35.0% | |
| ATAAACAACCTGTGCATCAA+TGG | + | tig0029037:32974-32993 | None:intergenic | 35.0% | |
| TTCTTCTCGTAAATGTTGCA+AGG | + | tig0029037:33122-33141 | None:intergenic | 35.0% | |
| TTTAGGGATTCTTATTCGTG+CGG | + | tig0029037:33401-33420 | None:intergenic | 35.0% | |
| TTCACAATGTAATGCTGTTC+AGG | + | tig0029037:33644-33663 | None:intergenic | 35.0% | |
| TAACTTAACCTGAGTGAGGA+AGG | + | tig0029037:25097-25116 | None:intergenic | 40.0% | |
| TGCTTAACTTAACCTGAGTG+AGG | + | tig0029037:25101-25120 | None:intergenic | 40.0% | |
| AAACGTGAAGAGTAAAGAGG+GGG | + | tig0029037:25176-25195 | None:intergenic | 40.0% | |
| GAAACGTGAAGAGTAAAGAG+GGG | + | tig0029037:25177-25196 | None:intergenic | 40.0% | |
| GTGAAACGTGAAGAGTAAAG+AGG | + | tig0029037:25179-25198 | None:intergenic | 40.0% | |
| ! | CTTTGAAGAAGCAGTGATCA+AGG | + | tig0029037:25299-25318 | None:intergenic | 40.0% |
| ! | AAAGAAGCTTTGGTGTGATC+TGG | - | tig0029037:25517-25536 | Msa1440190:intron | 40.0% |
| TGACTACTGATGGAGACAAA+GGG | + | tig0029037:25618-25637 | None:intergenic | 40.0% | |
| TTGACTACTGATGGAGACAA+AGG | + | tig0029037:25619-25638 | None:intergenic | 40.0% | |
| !! | TGACAAGTGTTGACTACTGA+TGG | + | tig0029037:25628-25647 | None:intergenic | 40.0% |
| TAGAAAGGGGATGAATTGCA+GGG | + | tig0029037:26361-26380 | None:intergenic | 40.0% | |
| TTAGAAAGGGGATGAATTGC+AGG | + | tig0029037:26362-26381 | None:intergenic | 40.0% | |
| CTCAGGGATGAAAAATCGAA+TGG | - | tig0029037:26431-26450 | Msa1440190:CDS | 40.0% | |
| ATCGAATGGCCTATAATTGC+AGG | - | tig0029037:26445-26464 | Msa1440190:CDS | 40.0% | |
| TCGAATGGCCTATAATTGCA+GGG | - | tig0029037:26446-26465 | Msa1440190:CDS | 40.0% | |
| GATCCACTATAAAGCTTGGT+GGG | + | tig0029037:26741-26760 | None:intergenic | 40.0% | |
| AGATCCACTATAAAGCTTGG+TGG | + | tig0029037:26742-26761 | None:intergenic | 40.0% | |
| AATCTTCTTCTTTCCACCAG+AGG | + | tig0029037:27135-27154 | None:intergenic | 40.0% | |
| GGTGGAAAGAAGAAGATTGT+AGG | - | tig0029037:27137-27156 | Msa1440190:intron | 40.0% | |
| GACAAAGAAGGACTCAATTC+TGG | - | tig0029037:27281-27300 | Msa1440190:intron | 40.0% | |
| ACGGCATAGACGTAATAAGA+GGG | + | tig0029037:27331-27350 | None:intergenic | 40.0% | |
| TACGGCATAGACGTAATAAG+AGG | + | tig0029037:27332-27351 | None:intergenic | 40.0% | |
| GATATCAGGACATTGAGATC+AGG | + | tig0029037:27505-27524 | None:intergenic | 40.0% | |
| AATTCTTTCCGCAGTGACAT+AGG | + | tig0029037:27545-27564 | None:intergenic | 40.0% | |
| AATGTGATCAGAACCAATGC+CGG | + | tig0029037:27602-27621 | None:intergenic | 40.0% | |
| TCACATTGATCTCAATGCTG+CGG | - | tig0029037:27615-27634 | Msa1440190:intron | 40.0% | |
| CATAGAGCCTATGATCTTGA+AGG | - | tig0029037:27790-27809 | Msa1440190:intron | 40.0% | |
| GATCTTGAAGGAAAGACAGT+TGG | - | tig0029037:27802-27821 | Msa1440190:intron | 40.0% | |
| TGAAGGAAAGACAGTTGGAA+CGG | - | tig0029037:27807-27826 | Msa1440190:intron | 40.0% | |
| AGTTAAAGGGTTTCAGCCTT+TGG | + | tig0029037:27864-27883 | None:intergenic | 40.0% | |
| AGAAATTGGAGCTCAGTTTG+AGG | - | tig0029037:27933-27952 | Msa1440190:intron | 40.0% | |
| TACCTTGTCTTATCAGTGAG+AGG | + | tig0029037:28009-28028 | None:intergenic | 40.0% | |
| TTGATTGTCAACAATGCTCG+TGG | - | tig0029037:28260-28279 | Msa1440190:intron | 40.0% | |
| ATTGCTGATGCTTGTTCTAG+TGG | - | tig0029037:28305-28324 | Msa1440190:intron | 40.0% | |
| ! | TAGGTTACAGTGGTGATGTT+TGG | - | tig0029037:28427-28446 | Msa1440190:intron | 40.0% |
| TGAGGAGTCATAGCATGATT+AGG | + | tig0029037:28495-28514 | None:intergenic | 40.0% | |
| GCTATGACTCCTCATATTTC+TGG | - | tig0029037:28501-28520 | Msa1440190:intron | 40.0% | |
| ATGGTGGTTCCAGAAATATG+AGG | + | tig0029037:28513-28532 | None:intergenic | 40.0% | |
| ATGGTAACACTGACACATGT+TGG | + | tig0029037:28765-28784 | None:intergenic | 40.0% | |
| AACCAAAGAACAAGGGACAA+GGG | + | tig0029037:29030-29049 | None:intergenic | 40.0% | |
| TAACCAAAGAACAAGGGACA+AGG | + | tig0029037:29031-29050 | None:intergenic | 40.0% | |
| GAGTCAAAGATATGCTTGAG+AGG | - | tig0029037:29134-29153 | Msa1440190:intron | 40.0% | |
| !! | TATGCTTGAGAGGCACTTTA+AGG | - | tig0029037:29144-29163 | Msa1440190:intron | 40.0% |
| !! | ATGCTTGAGAGGCACTTTAA+GGG | - | tig0029037:29145-29164 | Msa1440190:intron | 40.0% |
| ACAGAACTACATTGTGAAGG+AGG | - | tig0029037:29183-29202 | Msa1440190:intron | 40.0% | |
| CAGAACTACATTGTGAAGGA+GGG | - | tig0029037:29184-29203 | Msa1440190:intron | 40.0% | |
| GATACTACATTCACCGGTAT+TGG | + | tig0029037:29222-29241 | None:intergenic | 40.0% | |
| CTCTTCGATACTACATTCAC+CGG | + | tig0029037:29228-29247 | None:intergenic | 40.0% | |
| ! | GTGAATGTAGTATCGAAGAG+TGG | - | tig0029037:29228-29247 | Msa1440190:intron | 40.0% |
| GCTTCAAATTGCTGAAAGAC+AGG | + | tig0029037:29913-29932 | None:intergenic | 40.0% | |
| ! | TTTTGGACCAAACATTTGGG+AGG | + | tig0029037:30660-30679 | None:intergenic | 40.0% |
| ! | GTAAGACAGAAGCATGTATG+TGG | + | tig0029037:30986-31005 | None:intergenic | 40.0% |
| AAATTGAGGGAAAATGTGGG+AGG | - | tig0029037:31211-31230 | Msa1440190:intron | 40.0% | |
| TGCACAATTGAGGAACTTGA+AGG | - | tig0029037:31245-31264 | Msa1440190:intron | 40.0% | |
| TATTGAGAATAGGCATCTGG+AGG | - | tig0029037:31651-31670 | Msa1440190:intron | 40.0% | |
| ACATCCAACAAAATTGGGGT+TGG | + | tig0029037:31727-31746 | None:intergenic | 40.0% | |
| AGATATCAGGACATGCAGAT+CGG | + | tig0029037:31943-31962 | None:intergenic | 40.0% | |
| GGTGAAATGGTGTAGATATC+AGG | + | tig0029037:31956-31975 | None:intergenic | 40.0% | |
| AATTCTTTCCTCGGTGACAT+AGG | + | tig0029037:31982-32001 | None:intergenic | 40.0% | |
| !! | TTGCTTTTAACTGCTGGCAT+TGG | - | tig0029037:32023-32042 | Msa1440190:intron | 40.0% |
| ! | AGCGTTGAGATCAATGTGAT+CGG | + | tig0029037:32051-32070 | None:intergenic | 40.0% |
| TGAGAATTCTCATTCTCGTG+AGG | - | tig0029037:32144-32163 | Msa1440190:intron | 40.0% | |
| CATAGAGCCTATGATCTTGA+AGG | - | tig0029037:27790-27809 | Msa1440190:intron | 40.0% | |
| CGTCTTTCCTTCAAGATCAT+AGG | + | tig0029037:32237-32256 | None:intergenic | 40.0% | |
| AGTTAAAGGGTTTCAGCCTT+TGG | + | tig0029037:27864-27883 | None:intergenic | 40.0% | |
| ACTTAAGATGGAGCCTGAAT+TGG | - | tig0029037:32343-32362 | Msa1440190:intron | 40.0% | |
| AGAAATTGGAGCTCAGTTTG+AGG | - | tig0029037:27933-27952 | Msa1440190:intron | 40.0% | |
| GATTGTTAACAATGCTCGTG+GGG | - | tig0029037:32635-32654 | Msa1440190:intron | 40.0% | |
| ! | TAGGTTACAGTGGTGATGTT+TGG | - | tig0029037:28427-28446 | Msa1440190:intron | 40.0% |
| AAATATGAGGAGTCATCGCA+TGG | + | tig0029037:32942-32961 | None:intergenic | 40.0% | |
| TTTGGTCATTGGATCCAGAT+CGG | - | tig0029037:33192-33211 | Msa1440190:intron | 40.0% | |
| CAGTGACATTGGATTGAGAT+CGG | + | tig0029037:33289-33308 | None:intergenic | 40.0% | |
| AGACACTCCAAATCCATCAT+AGG | - | tig0029037:33346-33365 | Msa1440190:intron | 40.0% | |
| !! | GATTGTGCCTATGATGGATT+TGG | + | tig0029037:33356-33375 | None:intergenic | 40.0% |
| GAACAAGATTGTGCCTATGA+TGG | + | tig0029037:33362-33381 | None:intergenic | 40.0% | |
| GAGAAAATGTAGTCGGTAGT+AGG | + | tig0029037:33514-33533 | None:intergenic | 40.0% | |
| GAGTCAAAGATATGCTTGAG+AGG | - | tig0029037:29134-29153 | Msa1440190:intron | 40.0% | |
| !! | TATGCTTGAGAGGCACTTTA+AGG | - | tig0029037:29144-29163 | Msa1440190:intron | 40.0% |
| !! | ATGCTTGAGAGGCACTTTAA+GGG | - | tig0029037:29145-29164 | Msa1440190:intron | 40.0% |
| ACAGCATTACATTGTGAAGC+AGG | - | tig0029037:33646-33665 | Msa1440190:five_prime_UTR | 40.0% | |
| CAGCATTACATTGTGAAGCA+GGG | - | tig0029037:33647-33666 | Msa1440190:five_prime_UTR | 40.0% | |
| GTTGAATCGGCTATGTGATG+AGG | + | tig0029037:24947-24966 | None:intergenic | 45.0% | |
| AACGTGAAGAGTAAAGAGGG+GGG | + | tig0029037:25175-25194 | None:intergenic | 45.0% | |
| ACCTTCTTCCATCATCACCA+GGG | - | tig0029037:25336-25355 | Msa1440190:intron | 45.0% | |
| ! | ATGGGAGGATTAGTAAGCTC+AGG | - | tig0029037:26414-26433 | Msa1440190:intron | 45.0% |
| ! | TGGGAGGATTAGTAAGCTCA+GGG | - | tig0029037:26415-26434 | Msa1440190:CDS | 45.0% |
| ! | TTGCCCACCAAGCTTTATAG+TGG | - | tig0029037:26735-26754 | Msa1440190:intron | 45.0% |
| GGCAGATCCACTATAAAGCT+TGG | + | tig0029037:26745-26764 | None:intergenic | 45.0% | |
| TGTTGTTGAGAATAGGCCTC+TGG | - | tig0029037:27116-27135 | Msa1440190:intron | 45.0% | |
| GTAGGTGTGTTCTACAAAGG+CGG | - | tig0029037:27155-27174 | Msa1440190:intron | 45.0% | |
| !! | GGATGTGTTGAAGGAGCATT+AGG | - | tig0029037:27209-27228 | Msa1440190:intron | 45.0% |
| ATTAGGTATACGCGAGTGGT+TGG | - | tig0029037:27226-27245 | Msa1440190:intron | 45.0% | |
| GCATAGACGTAATAAGAGGG+TGG | + | tig0029037:27328-27347 | None:intergenic | 45.0% | |
| GGTGAAATGGTGTGGATATC+AGG | + | tig0029037:27519-27538 | None:intergenic | 45.0% | |
| CTTGTGAGGAATTTCTTGCC+TGG | - | tig0029037:27721-27740 | Msa1440190:intron | 45.0% | |
| TTTCTTGCCTGGTTACCATC+AGG | - | tig0029037:27732-27751 | Msa1440190:intron | 45.0% | |
| GTAATAGCCTGATGGTAACC+AGG | + | tig0029037:27742-27761 | None:intergenic | 45.0% | |
| GGTTACCATCAGGCTATTAC+CGG | - | tig0029037:27742-27761 | Msa1440190:intron | 45.0% | |
| ATTCTCCGGTAATAGCCTGA+TGG | + | tig0029037:27750-27769 | None:intergenic | 45.0% | |
| ATCAGGCTATTACCGGAGAA+TGG | - | tig0029037:27749-27768 | Msa1440190:intron | 45.0% | |
| ACTTAAGATGGCGCCTGAAT+TGG | - | tig0029037:27906-27925 | Msa1440190:intron | 45.0% | |
| AATTGGAGCTCAGTTTGAGG+AGG | - | tig0029037:27936-27955 | Msa1440190:intron | 45.0% | |
| TGCCTCTCACTGATAAGACA+AGG | - | tig0029037:28004-28023 | Msa1440190:intron | 45.0% | |
| !!! | GATCTTTTGGAGCTGGTTGT+GGG | + | tig0029037:28455-28474 | None:intergenic | 45.0% |
| !!! | TGATCTTTTGGAGCTGGTTG+TGG | + | tig0029037:28456-28475 | None:intergenic | 45.0% |
| !!! | CATGGATGATCTTTTGGAGC+TGG | + | tig0029037:28462-28481 | None:intergenic | 45.0% |
| CAGCTCCAAAAGATCATCCA+TGG | - | tig0029037:28460-28479 | Msa1440190:intron | 45.0% | |
| ! | TAGCGCCATGGATGATCTTT+TGG | + | tig0029037:28468-28487 | None:intergenic | 45.0% |
| AACTACCTGTGCATCAATGG+TGG | + | tig0029037:28529-28548 | None:intergenic | 45.0% | |
| AGAGCATACATGCAAGTGTG+AGG | + | tig0029037:28634-28653 | None:intergenic | 45.0% | |
| ! | ACGCCTACAATCTGAAGTGT+CGG | + | tig0029037:28723-28742 | None:intergenic | 45.0% |
| TGTTGGACATTCACACGTGT+CGG | + | tig0029037:28748-28767 | None:intergenic | 45.0% | |
| TACCCTTGTCCCTTGTTCTT+TGG | - | tig0029037:29025-29044 | Msa1440190:intron | 45.0% | |
| GTTCAGTTACGTTATGCTGC+TGG | - | tig0029037:29112-29131 | Msa1440190:intron | 45.0% | |
| CATTGTGAAGGAGGGTCAAT+TGG | - | tig0029037:29192-29211 | Msa1440190:intron | 45.0% | |
| GTCAATTGGCAAGCCAATAC+CGG | - | tig0029037:29206-29225 | Msa1440190:intron | 45.0% | |
| GTTCTGACTTCTGAGTCTTG+TGG | - | tig0029037:29250-29269 | Msa1440190:intron | 45.0% | |
| ! | GTCCAAAAGCATGGTGTCTT+TGG | - | tig0029037:30672-30691 | Msa1440190:CDS | 45.0% |
| ! | TGCCAAAGACACCATGCTTT+TGG | + | tig0029037:30677-30696 | None:intergenic | 45.0% |
| TGGTGTCTTTGGCATCACAA+AGG | - | tig0029037:30683-30702 | Msa1440190:CDS | 45.0% | |
| CTGTATTTACGGATCACGCT+TGG | + | tig0029037:30712-30731 | None:intergenic | 45.0% | |
| CATGTATGTGGACTTGACTG+TGG | + | tig0029037:30974-30993 | None:intergenic | 45.0% | |
| TCTCTAAGTGTCCTCATGCA+TGG | + | tig0029037:31177-31196 | None:intergenic | 45.0% | |
| ! | GCATCCAACCCCAATTTTGT+TGG | - | tig0029037:31720-31739 | Msa1440190:intron | 45.0% |
| !! | GGATGTGTTGAAGGAGCATT+AGG | - | tig0029037:27209-27228 | Msa1440190:intron | 45.0% |
| GACAAAGAAGGACCTGATTC+TGG | - | tig0029037:31813-31832 | Msa1440190:intron | 45.0% | |
| GATATCAGGACATGCAGATC+GGG | + | tig0029037:31942-31961 | None:intergenic | 45.0% | |
| TCACATTGATCTCAACGCTG+CGG | - | tig0029037:32052-32071 | Msa1440190:intron | 45.0% | |
| CACAGGAAGCAACGTAGTAT+CGG | - | tig0029037:32103-32122 | Msa1440190:intron | 45.0% | |
| TTTCTTGCCTGGTTACAAGC+AGG | - | tig0029037:32169-32188 | Msa1440190:intron | 45.0% | |
| ACCAGCAACATTCCATTCTC+CGG | + | tig0029037:32201-32220 | None:intergenic | 45.0% | |
| GATCTTGAAGGAAAGACGGT+TGG | - | tig0029037:32239-32258 | Msa1440190:intron | 45.0% | |
| ! | TCGGGAAGCTTTTACTCCAA+AGG | - | tig0029037:32282-32301 | Msa1440190:intron | 45.0% |
| ACCTTGTCTTATCGGTGAGA+GGG | + | tig0029037:32445-32464 | None:intergenic | 45.0% | |
| TACCTTGTCTTATCGGTGAG+AGG | + | tig0029037:32446-32465 | None:intergenic | 45.0% | |
| GTTGCTGATGCTTGTACTAG+TGG | - | tig0029037:32678-32697 | Msa1440190:intron | 45.0% | |
| ! | TGTACTAGTGGACACATTGC+AGG | - | tig0029037:32690-32709 | Msa1440190:intron | 45.0% |
| !!! | GATCTTTTGGAGCTGGTTGT+GGG | + | tig0029037:28455-28474 | None:intergenic | 45.0% |
| !!! | TGATCTTTTGGAGCTGGTTG+TGG | + | tig0029037:28456-28475 | None:intergenic | 45.0% |
| !!! | CATGGATGATCTTTTGGAGC+TGG | + | tig0029037:28462-28481 | None:intergenic | 45.0% |
| CAGCTCCAAAAGATCATCCA+TGG | - | tig0029037:28460-28479 | Msa1440190:intron | 45.0% | |
| ! | TAGCGCCATGGATGATCTTT+TGG | + | tig0029037:28468-28487 | None:intergenic | 45.0% |
| GCGATGACTCCTCATATTTC+TGG | - | tig0029037:32943-32962 | Msa1440190:intron | 45.0% | |
| TGGAACTACCATTGATGCAC+AGG | - | tig0029037:32963-32982 | Msa1440190:intron | 45.0% | |
| AAGCATGTCACATGCAGATG+TGG | - | tig0029037:33146-33165 | Msa1440190:intron | 45.0% | |
| AGTCAGCTCATCAGTGACAT+TGG | + | tig0029037:33300-33319 | None:intergenic | 45.0% | |
| GTTCAGTTACGTTATGCTGC+TGG | - | tig0029037:29112-29131 | Msa1440190:intron | 45.0% | |
| !! | ATCGGTATTGGCTTGCCAAT+TGG | + | tig0029037:33673-33692 | None:intergenic | 45.0% |
| !!! | TATCTTTTTTTTATTATTTT+TGG | + | tig0029037:25484-25503 | None:intergenic | 5.0% |
| !! | CATTATAAATTTATAATATA+CGG | + | tig0029037:26049-26068 | None:intergenic | 5.0% |
| !!! | TTAATTTTAAATTTTAAAAG+TGG | + | tig0029037:26074-26093 | None:intergenic | 5.0% |
| !!! | ATAATTTTACTATAATAAAT+GGG | + | tig0029037:26766-26785 | None:intergenic | 5.0% |
| !!! | AATAATTTTACTATAATAAA+TGG | + | tig0029037:26767-26786 | None:intergenic | 5.0% |
| !!! | TATATATATTAGTTTAATTA+CGG | + | tig0029037:27350-27369 | None:intergenic | 5.0% |
| !!! | TGTTTTTTAATTTTTAAAAT+TGG | - | tig0029037:31145-31164 | Msa1440190:intron | 5.0% |
| AGCAAGAAAGGGAGAGGAGT+TGG | - | tig0029037:25056-25075 | Msa1440190:intron | 50.0% | |
| AGAAAGGGAGAGGAGTTGGA+AGG | - | tig0029037:25060-25079 | Msa1440190:intron | 50.0% | |
| GGAGAGGAGTTGGAAGGAAA+GGG | - | tig0029037:25066-25085 | Msa1440190:intron | 50.0% | |
| CACCTTCTTCCATCATCACC+AGG | - | tig0029037:25335-25354 | Msa1440190:intron | 50.0% | |
| !! | TCCCTGGTGATGATGGAAGA+AGG | + | tig0029037:25340-25359 | None:intergenic | 50.0% |
| ! | ATGAAGGTCCCTGGTGATGA+TGG | + | tig0029037:25347-25366 | None:intergenic | 50.0% |
| TGAGCTTACATGAAGGTCCC+TGG | + | tig0029037:25356-25375 | None:intergenic | 50.0% | |
| CTGACATCGCGTGAATGTCA+CGG | + | tig0029037:25588-25607 | None:intergenic | 50.0% | |
| CTACTGATGGAGACAAAGGG+TGG | + | tig0029037:25615-25634 | None:intergenic | 50.0% | |
| TGTTGAGAATAGGCCTCTGG+TGG | - | tig0029037:27119-27138 | Msa1440190:intron | 50.0% | |
| GAGCATTAGGTATACGCGAG+TGG | - | tig0029037:27222-27241 | Msa1440190:intron | 50.0% | |
| GGAATGTGCTTCTCGAGTTC+TGG | + | tig0029037:27484-27503 | None:intergenic | 50.0% | |
| ATAGGCAGGGTGAAATGGTG+TGG | + | tig0029037:27527-27546 | None:intergenic | 50.0% | |
| GTGACATAGGCAGGGTGAAA+TGG | + | tig0029037:27532-27551 | None:intergenic | 50.0% | |
| TTTCCGCAGTGACATAGGCA+GGG | + | tig0029037:27540-27559 | None:intergenic | 50.0% | |
| TTAGAGCTGCTTCTAACCGC+CGG | - | tig0029037:27580-27599 | Msa1440190:intron | 50.0% | |
| !! | TGCTGGTTTAACTGTCGCAG+AGG | - | tig0029037:27642-27661 | Msa1440190:intron | 50.0% |
| TTAACTGTCGCAGAGGTCAC+AGG | - | tig0029037:27649-27668 | Msa1440190:intron | 50.0% | |
| CACAGGAAGCAACACTGTGT+CGG | - | tig0029037:27666-27685 | Msa1440190:intron | 50.0% | |
| ACCGGAGAATGGAATGTTGC+TGG | - | tig0029037:27760-27779 | Msa1440190:intron | 50.0% | |
| GCCAGCAACATTCCATTCTC+CGG | + | tig0029037:27764-27783 | None:intergenic | 50.0% | |
| GGAAAGACAGTTGGAACGGT+CGG | - | tig0029037:27811-27830 | Msa1440190:intron | 50.0% | |
| ACGCATGAATACACAACGCG+TGG | + | tig0029037:28160-28179 | None:intergenic | 50.0% | |
| ! | CAATGCTCGTGGAGCACTTA+TGG | - | tig0029037:28271-28290 | Msa1440190:intron | 50.0% |
| ! | TGTTCTAGTGGACACGTTGC+AGG | - | tig0029037:28317-28336 | Msa1440190:intron | 50.0% |
| TGATTAGGCATGTAGCGCCA+TGG | + | tig0029037:28480-28499 | None:intergenic | 50.0% | |
| TGGAACCACCATTGATGCAC+AGG | - | tig0029037:28521-28540 | Msa1440190:intron | 50.0% | |
| ! | GCACCGACACTTCAGATTGT+AGG | - | tig0029037:28717-28736 | Msa1440190:intron | 50.0% |
| ! | GCTGCTGCGAGCTATTCTTT+TGG | + | tig0029037:29890-29909 | None:intergenic | 50.0% |
| GAGCATTAGGTATACGCGAG+TGG | - | tig0029037:27222-27241 | Msa1440190:intron | 50.0% | |
| GGAATGTGCTTCTCGAGTTC+TGG | + | tig0029037:27484-27503 | None:intergenic | 50.0% | |
| GTGACATAGGCAGGGTGAAA+TGG | + | tig0029037:27532-27551 | None:intergenic | 50.0% | |
| TTTCCTCGGTGACATAGGCA+GGG | + | tig0029037:31977-31996 | None:intergenic | 50.0% | |
| !! | CAACGTAGTATCGGTTGCTG+AGG | - | tig0029037:32112-32131 | Msa1440190:intron | 50.0% |
| CTCGTGAGGAATTTCTTGCC+TGG | - | tig0029037:32158-32177 | Msa1440190:intron | 50.0% | |
| GGAAAGACGGTTGGAACAGT+TGG | - | tig0029037:32248-32267 | Msa1440190:intron | 50.0% | |
| !! | ACAGTTGGTGCTGGACGAAT+CGG | - | tig0029037:32263-32282 | Msa1440190:intron | 50.0% |
| CCTTGTCTTATCGGTGAGAG+GGG | + | tig0029037:32444-32463 | None:intergenic | 50.0% | |
| TGAGGAGTCATCGCATGGTT+TGG | + | tig0029037:32937-32956 | None:intergenic | 50.0% | |
| TGCATTCACGCGCTCATCTT+TGG | - | tig0029037:33174-33193 | Msa1440190:intron | 50.0% | |
| ACGCGCTCATCTTTGGTCAT+TGG | - | tig0029037:33181-33200 | Msa1440190:intron | 50.0% | |
| !! | AAAGTATTGGGCGTGAGCTC+TGG | - | tig0029037:33258-33277 | Msa1440190:CDS | 50.0% |
| !! | TGAGAGGCACTTTAAGGGTG+AGG | - | tig0029037:29150-29169 | Msa1440190:intron | 50.0% |
| CATTGTGAAGCAGGGCCAAT+TGG | - | tig0029037:33655-33674 | Msa1440190:five_prime_UTR | 50.0% | |
| GGGAGAGGAGTTGGAAGGAA+AGG | - | tig0029037:25065-25084 | Msa1440190:intron | 55.0% | |
| GGGTAAAGCCTTCCTCACTC+AGG | - | tig0029037:25086-25105 | Msa1440190:intron | 55.0% | |
| GGGGTTTGGAAGAGCTTACG+TGG | + | tig0029037:26222-26241 | None:intergenic | 55.0% | |
| CGCGAGTGGTTGGAATCACA+AGG | - | tig0029037:27236-27255 | Msa1440190:intron | 55.0% | |
| TCACCCTGCCTATGTCACTG+CGG | - | tig0029037:27534-27553 | Msa1440190:intron | 55.0% | |
| CTTTCCGCAGTGACATAGGC+AGG | + | tig0029037:27541-27560 | None:intergenic | 55.0% | |
| GTGATCAGAACCAATGCCGG+CGG | + | tig0029037:27599-27618 | None:intergenic | 55.0% | |
| !! | CAACACTGTGTCGGTTGCTG+AGG | - | tig0029037:27675-27694 | Msa1440190:intron | 55.0% |
| CGCGAGTGGCTTGAATCACA+AGG | - | tig0029037:31768-31787 | Msa1440190:intron | 55.0% | |
| CTTTCCTCGGTGACATAGGC+AGG | + | tig0029037:31978-31997 | None:intergenic | 55.0% | |
| !! | TGCTGGTTTAACCGTCGCAG+AGG | - | tig0029037:32079-32098 | Msa1440190:intron | 55.0% |
| TTAACCGTCGCAGAGGTCAC+AGG | - | tig0029037:32086-32105 | Msa1440190:intron | 55.0% | |
| GCAACAGCCTGCTTGTAACC+AGG | + | tig0029037:32179-32198 | None:intergenic | 55.0% | |
| GGTTACAAGCAGGCTGTTGC+CGG | - | tig0029037:32179-32198 | Msa1440190:intron | 55.0% | |
| GCCGGAGAATGGAATGTTGC+TGG | - | tig0029037:32197-32216 | Msa1440190:intron | 55.0% | |
| ! | ACGGTTGGAACAGTTGGTGC+TGG | - | tig0029037:32254-32273 | Msa1440190:intron | 55.0% |
| !! | CAGTTGGTGCTGGACGAATC+GGG | - | tig0029037:32264-32283 | Msa1440190:intron | 55.0% |
| CCCCTCTCACCGATAAGACA+AGG | - | tig0029037:32441-32460 | Msa1440190:intron | 55.0% | |
| CAATGCTCGTGGGGCGATTA+TGG | - | tig0029037:32644-32663 | Msa1440190:intron | 55.0% | |
| ! | TGGTTTGGCATGTAGCGCCA+TGG | + | tig0029037:32922-32941 | None:intergenic | 55.0% |
| CTGCTTCTAACCGCCGGCAT+TGG | - | tig0029037:27586-27605 | Msa1440190:intron | 60.0% | |
| ACAGTTGGAACGGTCGGTGC+TGG | - | tig0029037:27817-27836 | Msa1440190:intron | 60.0% | |
| !! | ACGGTCGGTGCTGGACGAAT+TGG | - | tig0029037:27826-27845 | Msa1440190:intron | 60.0% |
| !! | CGGTCGGTGCTGGACGAATT+GGG | - | tig0029037:27827-27846 | Msa1440190:intron | 60.0% |
| TCACCCTGCCTATGTCACCG+AGG | - | tig0029037:31971-31990 | Msa1440190:intron | 60.0% | |
| GCTTCCTGTGACCTCTGCGA+CGG | + | tig0029037:27656-27675 | None:intergenic | 60.0% | |
| AGCAGGCTGTTGCCGGAGAA+TGG | - | tig0029037:32186-32205 | Msa1440190:intron | 60.0% | |
| CTCAATGCTGCGGCTGCTGC+TGG | - | tig0029037:27625-27644 | Msa1440190:intron | 65.0% | |
| CTCAACGCTGCGGCTGCTGC+TGG | - | tig0029037:32062-32081 | Msa1440190:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029037 | gene | 24881 | 33694 | 24881 | ID=Msa1440190;Name=Msa1440190 |
| tig0029037 | mRNA | 24881 | 33694 | 24881 | ID=Msa1440190-mRNA-1;Parent=Msa1440190;Name=Msa1440190-mRNA-1;_AED=0.15;_eAED=0.16;_QI=263|0.35|0.33|1|0.5|0.46|15|0|685 |
| tig0029037 | exon | 24881 | 24994 | 24881 | ID=Msa1440190-mRNA-1:exon:12161;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 25591 | 25703 | 25591 | ID=Msa1440190-mRNA-1:exon:12160;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 25864 | 25988 | 25864 | ID=Msa1440190-mRNA-1:exon:12159;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 26158 | 26384 | 26158 | ID=Msa1440190-mRNA-1:exon:12158;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 26415 | 26653 | 26415 | ID=Msa1440190-mRNA-1:exon:12157;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 26741 | 26912 | 26741 | ID=Msa1440190-mRNA-1:exon:12156;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 29148 | 29155 | 29148 | ID=Msa1440190-mRNA-1:exon:12155;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 29370 | 29457 | 29370 | ID=Msa1440190-mRNA-1:exon:12154;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 30033 | 30145 | 30033 | ID=Msa1440190-mRNA-1:exon:12153;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 30237 | 30361 | 30237 | ID=Msa1440190-mRNA-1:exon:12152;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 30595 | 30821 | 30595 | ID=Msa1440190-mRNA-1:exon:12151;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 30852 | 31090 | 30852 | ID=Msa1440190-mRNA-1:exon:12150;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 31273 | 31444 | 31273 | ID=Msa1440190-mRNA-1:exon:12149;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 33209 | 33340 | 33209 | ID=Msa1440190-mRNA-1:exon:12148;Parent=Msa1440190-mRNA-1 |
| tig0029037 | exon | 33468 | 33694 | 33468 | ID=Msa1440190-mRNA-1:exon:12147;Parent=Msa1440190-mRNA-1 |
| tig0029037 | five_prime_UTR | 33468 | 33694 | 33468 | ID=Msa1440190-mRNA-1:five_prime_utr;Parent=Msa1440190-mRNA-1 |
| tig0029037 | five_prime_UTR | 33305 | 33340 | 33305 | ID=Msa1440190-mRNA-1:five_prime_utr;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 33209 | 33304 | 33209 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 31273 | 31444 | 31273 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 30852 | 31090 | 30852 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 30595 | 30821 | 30595 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 30237 | 30361 | 30237 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 30033 | 30145 | 30033 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 29370 | 29457 | 29370 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 29148 | 29155 | 29148 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 26741 | 26912 | 26741 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 26415 | 26653 | 26415 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 26158 | 26384 | 26158 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 25864 | 25988 | 25864 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 25591 | 25703 | 25591 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| tig0029037 | CDS | 24881 | 24994 | 24881 | ID=Msa1440190-mRNA-1:cds;Parent=Msa1440190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
