AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336230 MtrunA17_Chr7g0265221 95.349 387 8 3 1 381 1 383 0.0 758
Msa1336230 MtrunA17_Chr1g0179801 69.010 384 104 5 1 379 1 374 0.0 554
Msa1336230 MtrunA17_Chr7g0250511 39.193 347 185 7 38 378 25 351 1.05e-85 264
Msa1336230 MtrunA17_Chr5g0426891 37.677 353 198 5 26 374 4 338 3.76e-85 262
Msa1336230 MtrunA17_Chr8g0345831 37.069 348 196 4 35 378 15 343 1.55e-77 243
Msa1336230 MtrunA17_Chr3g0128001 38.953 344 180 7 37 374 14 333 7.18e-74 233
Msa1336230 MtrunA17_Chr4g0050031 35.754 358 211 6 26 378 23 366 7.50e-74 234
Msa1336230 MtrunA17_Chr4g0006371 34.417 369 208 8 26 375 14 367 3.72e-68 219
Msa1336230 MtrunA17_Chr7g0242551 35.376 359 209 8 26 375 15 359 5.42e-68 218
Msa1336230 MtrunA17_Chr3g0126741 37.895 285 161 4 67 347 59 331 1.85e-67 217
Msa1336230 MtrunA17_Chr7g0239111 35.277 343 190 9 50 378 32 356 8.78e-64 207
Msa1336230 MtrunA17_Chr5g0421091 33.426 359 211 8 26 378 11 347 9.89e-63 204
Msa1336230 MtrunA17_Chr8g0375671 33.521 355 202 9 35 378 26 357 1.06e-62 205
Msa1336230 MtrunA17_Chr5g0420901 33.333 357 204 10 31 378 16 347 6.08e-62 202
Msa1336230 MtrunA17_Chr5g0420981 31.445 353 216 7 32 378 23 355 3.60e-61 201
Msa1336230 MtrunA17_Chr8g0365241 33.229 319 192 5 66 378 56 359 5.47e-61 200
Msa1336230 MtrunA17_Chr1g0184151 34.441 331 188 6 35 357 12 321 7.64e-61 199
Msa1336230 MtrunA17_Chr5g0421011 32.033 359 212 8 28 378 14 348 1.50e-60 199
Msa1336230 MtrunA17_Chr5g0423221 33.429 350 202 9 37 378 47 373 1.88e-60 199
Msa1336230 MtrunA17_Chr2g0311831 34.197 386 211 13 7 378 15 371 3.22e-60 199
Msa1336230 MtrunA17_Chr2g0314381 33.425 365 209 8 26 380 42 382 3.61e-60 199
Msa1336230 MtrunA17_Chr5g0423201 33.229 319 192 4 66 378 46 349 4.13e-60 198
Msa1336230 MtrunA17_Chr5g0398291 34.857 350 196 10 38 371 19 352 6.92e-60 197
Msa1336230 MtrunA17_Chr3g0113641 34.637 358 201 9 32 377 20 356 1.55e-59 196
Msa1336230 MtrunA17_Chr8g0375601 31.831 355 216 6 32 378 16 352 3.61e-59 196
Msa1336230 MtrunA17_Chr8g0354261 34.571 350 198 8 21 360 28 356 5.04e-59 196
Msa1336230 MtrunA17_Chr7g0239101 33.143 350 203 9 37 378 30 356 8.47e-59 194
Msa1336230 MtrunA17_Chr8g0336851 32.865 356 201 11 21 365 23 351 1.00e-58 194
Msa1336230 MtrunA17_Chr1g0187821 33.884 363 214 8 10 365 14 357 1.21e-58 194
Msa1336230 MtrunA17_Chr7g0239121 35.503 338 185 10 48 370 26 345 3.53e-58 193
Msa1336230 MtrunA17_Chr5g0420951 30.966 352 213 8 35 378 26 355 5.91e-58 192
Msa1336230 MtrunA17_Chr8g0375571 33.056 360 205 9 32 379 16 351 1.04e-57 192
Msa1336230 MtrunA17_Chr5g0420941 30.641 359 220 9 26 378 11 346 1.54e-57 191
Msa1336230 MtrunA17_Chr5g0437181 33.429 350 204 8 38 377 25 355 2.47e-57 191
Msa1336230 MtrunA17_Chr5g0412651 32.915 319 180 6 67 370 38 337 5.91e-57 189
Msa1336230 MtrunA17_Chr3g0109041 32.591 359 203 10 26 371 10 342 6.46e-57 189
Msa1336230 MtrunA17_Chr2g0314391 32.827 329 199 6 59 380 62 375 7.08e-57 190
Msa1336230 MtrunA17_Chr1g0184161 32.647 340 198 6 35 364 12 330 8.27e-57 189
Msa1336230 MtrunA17_Chr8g0336761 33.758 314 171 9 67 365 60 351 9.71e-57 189
Msa1336230 MtrunA17_Chr8g0354241 32.194 351 207 8 21 361 28 357 1.66e-56 189
Msa1336230 MtrunA17_Chr7g0239821 33.143 350 203 10 37 378 39 365 1.79e-56 189
Msa1336230 MtrunA17_Chr1g0184121 32.153 339 205 5 27 360 3 321 2.81e-56 187
Msa1336230 MtrunA17_Chr8g0336861 32.670 352 200 10 21 361 23 348 4.48e-56 187
Msa1336230 MtrunA17_Chr5g0424201 33.636 330 189 7 38 359 20 327 5.33e-56 186
Msa1336230 MtrunA17_Chr5g0423251 29.379 354 210 9 37 378 23 348 6.84e-56 187
Msa1336230 MtrunA17_Chr2g0311761 33.162 389 212 13 7 378 15 372 6.87e-56 187
Msa1336230 MtrunA17_Chr1g0187831 33.333 345 206 7 25 361 29 357 7.03e-56 188
Msa1336230 MtrunA17_Chr8g0348081 33.056 360 195 10 21 365 23 351 7.71e-56 187
Msa1336230 MtrunA17_Chr3g0125201 34.797 296 178 6 65 359 1 282 1.04e-55 185
Msa1336230 MtrunA17_Chr5g0423191 30.398 352 209 9 37 378 23 348 1.05e-55 186
Msa1336230 MtrunA17_Chr2g0311681 35.244 349 193 9 25 361 26 353 1.32e-55 186
Msa1336230 MtrunA17_Chr2g0314401 32.110 327 200 6 59 378 43 354 1.72e-55 186
Msa1336230 MtrunA17_Chr5g0423211 31.476 359 210 13 31 378 17 350 4.91e-55 184
Msa1336230 MtrunA17_Chr1g0162191 33.333 354 193 9 35 373 20 345 5.58e-55 184
Msa1336230 MtrunA17_Chr1g0187811 31.268 355 220 7 21 365 140 480 7.65e-55 187
Msa1336230 MtrunA17_Chr2g0311711 35.244 349 190 10 25 361 30 354 9.66e-55 184
Msa1336230 MtrunA17_Chr2g0296371 31.624 351 208 7 38 378 28 356 1.08e-54 184
Msa1336230 MtrunA17_Chr1g0184111 31.858 339 206 5 27 360 3 321 2.11e-54 182
Msa1336230 MtrunA17_Chr4g0066121 33.648 318 182 8 56 361 48 348 2.15e-54 183
Msa1336230 MtrunA17_Chr1g0184101 31.212 330 202 5 35 359 11 320 2.72e-54 182
Msa1336230 MtrunA17_Chr2g0311921 32.479 351 204 9 25 365 18 345 5.35e-54 182
Msa1336230 MtrunA17_Chr2g0311701 34.000 350 196 8 25 361 32 359 9.88e-54 182
Msa1336230 MtrunA17_Chr5g0412681 33.119 311 180 5 67 369 33 323 1.25e-53 181
Msa1336230 MtrunA17_Chr8g0336781 32.410 361 197 13 21 365 58 387 1.77e-53 182
Msa1336230 MtrunA17_Chr8g0375701 34.513 339 193 9 49 378 37 355 2.03e-53 180
Msa1336230 MtrunA17_Chr5g0412671 32.609 322 185 7 67 372 38 343 2.21e-53 180
Msa1336230 MtrunA17_Chr2g0311691 33.333 351 197 8 25 361 26 353 3.15e-53 180
Msa1336230 MtrunA17_Chr5g0421101 30.925 346 205 9 38 374 24 344 9.50e-53 179
Msa1336230 MtrunA17_Chr2g0311741 35.922 309 170 7 59 358 19 308 1.25e-52 177
Msa1336230 MtrunA17_Chr8g0336631 33.651 315 171 10 67 365 60 352 2.44e-52 178
Msa1336230 MtrunA17_Chr6g0455481 32.464 345 202 5 38 375 19 339 2.57e-52 177
Msa1336230 MtrunA17_Chr2g0311631 31.667 360 205 11 25 369 21 354 2.87e-52 177
Msa1336230 MtrunA17_Chr8g0375681 32.517 286 172 4 99 378 15 285 6.14e-52 175
Msa1336230 MtrunA17_Chr5g0421041 29.598 348 207 8 37 374 23 342 6.97e-52 176
Msa1336230 MtrunA17_Chr7g0247991 34.795 365 204 11 25 378 32 373 7.66e-52 177
Msa1336230 MtrunA17_Chr5g0424211 32.704 318 186 7 38 347 18 315 9.06e-52 176
Msa1336230 MtrunA17_Chr7g0232161 32.803 314 178 10 37 342 35 323 1.22e-51 175
Msa1336230 MtrunA17_Chr2g0311861 33.243 370 189 12 21 378 24 347 1.75e-51 175
Msa1336230 MtrunA17_Chr6g0472861 33.143 350 209 10 21 361 23 356 2.92e-51 175
Msa1336230 MtrunA17_Chr8g0371931 33.555 301 166 7 48 337 26 303 3.49e-51 175
Msa1336230 MtrunA17_Chr4g0055591 30.612 343 208 8 25 360 24 343 8.64e-51 174
Msa1336230 MtrunA17_Chr8g0364471 31.805 349 202 11 25 361 32 356 2.08e-50 173
Msa1336230 MtrunA17_Chr7g0235951 30.769 364 220 9 25 378 32 373 2.39e-50 173
Msa1336230 MtrunA17_Chr8g0371921 34.098 305 171 7 42 337 20 303 2.65e-50 172
Msa1336230 MtrunA17_Chr1g0184241 32.337 368 224 10 1 365 9 354 2.84e-50 172
Msa1336230 MtrunA17_Chr3g0102041 34.859 284 155 7 66 337 38 303 7.36e-50 171
Msa1336230 MtrunA17_Chr7g0266651 29.589 365 229 9 21 378 19 362 7.43e-50 171
Msa1336230 MtrunA17_Chr7g0225881 32.194 351 206 10 21 360 23 352 3.05e-49 170
Msa1336230 MtrunA17_Chr3g0114861 31.231 333 195 8 35 358 14 321 3.12e-49 169
Msa1336230 MtrunA17_Chr3g0145171 31.833 311 185 6 61 358 46 342 3.33e-49 169
Msa1336230 MtrunA17_Chr8g0370711 33.226 310 184 7 61 361 46 341 3.40e-49 169
Msa1336230 MtrunA17_Chr3g0093761 32.329 365 208 10 25 378 17 353 5.56e-49 169
Msa1336230 MtrunA17_Chr8g0336751 33.871 310 179 8 65 365 92 384 7.85e-49 169
Msa1336230 MtrunA17_Chr7g0220011 32.184 348 203 8 34 373 11 333 1.65e-48 167
Msa1336230 MtrunA17_Chr8g0370721 35.117 299 169 7 61 350 46 328 2.04e-48 167
Msa1336230 MtrunA17_Chr3g0093751 31.781 365 211 9 25 378 17 354 3.56e-48 167
Msa1336230 MtrunA17_Chr1g0167911 31.805 349 203 12 25 363 19 342 3.62e-48 167
Msa1336230 MtrunA17_Chr5g0405411 32.558 301 169 7 48 337 26 303 5.20e-48 166
Msa1336230 MtrunA17_Chr8g0335411 33.242 364 211 9 25 378 32 373 6.88e-48 166
Msa1336230 MtrunA17_Chr7g0239071 34.000 300 173 7 87 378 19 301 1.09e-47 164
Msa1336230 MtrunA17_Chr3g0093741 31.215 362 217 9 25 378 17 354 1.15e-47 165
Msa1336230 MtrunA17_Chr1g0204181 31.594 345 188 7 38 362 38 354 1.26e-47 166
Msa1336230 MtrunA17_Chr4g0045471 31.686 344 196 10 49 371 15 340 7.19e-47 163
Msa1336230 MtrunA17_Chr4g0064781 33.119 311 179 6 67 368 50 340 7.48e-47 163
Msa1336230 MtrunA17_Chr7g0220001 29.878 328 200 6 38 359 18 321 1.00e-46 162
Msa1336230 MtrunA17_Chr7g0236011 32.880 368 207 11 25 378 32 373 1.67e-46 163
Msa1336230 MtrunA17_Chr6g0474391 31.195 343 192 7 38 362 43 359 1.92e-46 163
Msa1336230 MtrunA17_Chr3g0087031 30.337 356 207 9 36 378 33 360 2.81e-46 162
Msa1336230 MtrunA17_Chr1g0162361 30.159 315 180 5 66 360 26 320 5.41e-46 160
Msa1336230 MtrunA17_Chr1g0170631 39.512 205 106 5 177 378 3 192 9.65e-46 155
Msa1336230 MtrunA17_Chr1g0162351 29.706 340 201 5 42 360 51 373 1.35e-45 161
Msa1336230 MtrunA17_Chr7g0239091 32.710 321 180 11 66 378 159 451 9.90e-45 160
Msa1336230 MtrunA17_Chr4g0045411 31.488 289 167 6 84 358 54 325 2.33e-44 156
Msa1336230 MtrunA17_Chr1g0162321 28.969 359 212 7 37 374 46 382 2.98e-44 157
Msa1336230 MtrunA17_Chr4g0045431 31.429 315 165 7 84 371 49 339 4.06e-44 156
Msa1336230 MtrunA17_Chr2g0332191 32.508 323 193 7 56 372 38 341 4.15e-44 156
Msa1336230 MtrunA17_Chr1g0167961 31.135 379 213 14 6 365 10 359 8.53e-44 155
Msa1336230 MtrunA17_Chr1g0161041 31.073 354 215 10 25 372 59 389 9.67e-44 156
Msa1336230 MtrunA17_Chr3g0130391 30.117 342 197 7 38 362 45 361 1.15e-43 155
Msa1336230 MtrunA17_Chr1g0167951 30.110 362 222 9 12 365 4 342 1.53e-43 154
Msa1336230 MtrunA17_Chr1g0161081 29.917 361 226 9 21 379 32 367 2.66e-43 154
Msa1336230 MtrunA17_Chr1g0161111 29.545 352 227 7 21 370 91 423 5.44e-43 155
Msa1336230 MtrunA17_Chr4g0045451 28.097 331 195 8 67 371 26 339 7.64e-42 150
Msa1336230 MtrunA17_Chr2g0289341 30.556 288 169 7 67 345 4 269 1.15e-41 148
Msa1336230 MtrunA17_Chr4g0045441 29.738 343 201 10 49 370 15 338 2.28e-41 149
Msa1336230 MtrunA17_Chr3g0126761 39.766 171 91 1 177 347 44 202 9.38e-41 144
Msa1336230 MtrunA17_Chr3g0145181 30.503 318 188 9 61 363 43 342 2.53e-40 146
Msa1336230 MtrunA17_Chr3g0121141 31.142 289 168 6 67 346 4 270 2.89e-40 145
Msa1336230 MtrunA17_Chr8g0351101 30.678 339 198 8 38 362 33 348 3.59e-40 146
Msa1336230 MtrunA17_Chr3g0114871 31.802 283 162 8 38 314 18 275 4.20e-40 143
Msa1336230 MtrunA17_Chr4g0066991 31.044 364 199 11 25 378 32 353 1.51e-39 144
Msa1336230 MtrunA17_Chr1g0191201 28.610 367 214 11 18 362 8 348 1.73e-39 144
Msa1336230 MtrunA17_Chr7g0265351 29.245 318 200 5 67 378 39 337 1.97e-39 143
Msa1336230 MtrunA17_Chr4g0011311 30.824 279 167 9 25 299 32 288 4.40e-39 141
Msa1336230 MtrunA17_Chr3g0145201 31.353 303 176 8 62 350 679 963 1.29e-38 147
Msa1336230 MtrunA17_Chr1g0148771 33.333 276 159 7 67 337 63 318 1.33e-38 141
Msa1336230 MtrunA17_Chr3g0125421 30.383 339 199 10 38 362 16 331 4.16e-38 140
Msa1336230 MtrunA17_Chr4g0053251 31.544 298 163 10 66 337 7 289 5.51e-38 139
Msa1336230 MtrunA17_Chr5g0420721 30.451 266 156 7 123 378 4 250 7.50e-38 137
Msa1336230 MtrunA17_Chr5g0439011 29.110 292 182 5 65 350 3 275 1.64e-37 137
Msa1336230 MtrunA17_Chr1g0167931 30.259 347 166 11 21 356 15 296 3.19e-37 137
Msa1336230 MtrunA17_Chr8g0336801 45.385 130 68 1 235 361 10 139 1.00e-36 130
Msa1336230 MtrunA17_Chr8g0384481 29.429 350 202 11 38 371 38 358 5.10e-36 135
Msa1336230 MtrunA17_Chr7g0235981 32.222 270 161 4 99 361 56 310 7.51e-36 133
Msa1336230 MtrunA17_Chr6g0488511 29.524 315 202 8 65 377 1 297 9.56e-36 132
Msa1336230 MtrunA17_Chr5g0420881 40.559 143 84 1 237 378 2 144 2.39e-35 127
Msa1336230 MtrunA17_Chr8g0362741 31.522 276 154 8 25 299 32 273 3.65e-35 130
Msa1336230 MtrunA17_Chr4g0045461 27.697 343 209 9 49 371 15 338 7.63e-35 132
Msa1336230 MtrunA17_Chr1g0158011 29.603 277 175 6 106 379 3 262 1.43e-34 128
Msa1336230 MtrunA17_Chr8g0384461 27.350 351 218 7 27 365 18 343 1.12e-33 128
Msa1336230 MtrunA17_Chr2g0314371 28.616 318 193 10 25 322 16 319 2.20e-32 124
Msa1336230 MtrunA17_Chr3g0092531 31.522 276 156 7 83 348 26 278 6.66e-32 122
Msa1336230 MtrunA17_Chr4g0004071 29.063 320 193 9 66 372 8 306 7.39e-32 122
Msa1336230 MtrunA17_Chr4g0068891 29.126 309 175 9 67 358 20 301 3.44e-31 120
Msa1336230 MtrunA17_Chr4g0055911 30.699 329 185 11 64 368 6 315 1.32e-30 119
Msa1336230 MtrunA17_Chr8g0336871 38.621 145 79 3 220 360 18 156 2.82e-30 114
Msa1336230 MtrunA17_Chr2g0319491 27.972 286 183 8 54 335 22 288 1.86e-29 116
Msa1336230 MtrunA17_Chr4g0075471 39.259 135 72 2 211 344 13 138 6.96e-29 110
Msa1336230 MtrunA17_Chr4g0004061 28.349 321 195 10 66 372 8 307 4.60e-28 112
Msa1336230 MtrunA17_Chr2g0285931 27.148 291 176 8 67 342 28 297 1.06e-27 111
Msa1336230 MtrunA17_Chr1g0194321 28.481 316 184 9 65 358 18 313 1.21e-27 111
Msa1336230 MtrunA17_Chr1g0158021 28.992 238 146 6 59 291 41 260 1.87e-27 109
Msa1336230 MtrunA17_Chr4g0064771 42.657 143 78 2 230 368 63 205 1.66e-26 105
Msa1336230 MtrunA17_Chr4g0009561 27.077 325 198 11 66 370 6 311 3.16e-26 107
Msa1336230 MtrunA17_Chr4g0055871 29.568 301 178 10 64 350 6 286 7.52e-26 105
Msa1336230 MtrunA17_Chr8g0358941 26.936 297 172 10 66 342 26 297 9.88e-26 106
Msa1336230 MtrunA17_Chr2g0313111 25.817 306 197 9 45 342 7 290 7.36e-25 103
Msa1336230 MtrunA17_Chr2g0293931 38.922 167 83 6 180 338 10 165 6.02e-24 98.2
Msa1336230 MtrunA17_Chr5g0394071 37.671 146 77 2 179 324 4 135 1.76e-23 96.3
Msa1336230 MtrunA17_Chr1g0170641 30.114 176 100 4 8 177 3 161 2.21e-23 95.5
Msa1336230 MtrunA17_Chr7g0233661 49.451 91 46 0 234 324 19 109 2.56e-23 95.1
Msa1336230 MtrunA17_Chr8g0389941 27.742 310 177 10 69 350 33 323 2.97e-23 99.4
Msa1336230 MtrunA17_Chr4g0037611 43.689 103 57 1 223 324 23 125 4.16e-22 92.4
Msa1336230 MtrunA17_Chr3g0138351 23.692 325 207 6 65 369 5 308 7.91e-22 94.7
Msa1336230 MtrunA17_Chr4g0052251 24.915 293 191 7 87 361 43 324 1.05e-21 94.7
Msa1336230 MtrunA17_Chr8g0348951 26.647 334 197 11 65 381 8 310 2.06e-21 94.0
Msa1336230 MtrunA17_Chr3g0105281 29.044 272 154 9 70 324 28 277 2.60e-21 93.6
Msa1336230 MtrunA17_Chr8g0375581 44.872 78 42 1 219 295 8 85 7.21e-20 83.6
Msa1336230 MtrunA17_Chr5g0407781 26.599 297 173 9 67 350 5 269 1.08e-19 88.6
Msa1336230 MtrunA17_Chr4g0009541 24.841 314 197 10 66 361 6 298 1.94e-19 88.2
Msa1336230 MtrunA17_Chr5g0407731 23.333 300 199 7 67 360 33 307 1.23e-18 85.9
Msa1336230 MtrunA17_Chr8g0336831 26.357 258 152 10 6 256 14 240 1.56e-18 84.3
Msa1336230 MtrunA17_Chr6g0486831 44.860 107 53 2 249 350 207 312 1.86e-18 85.5
Msa1336230 MtrunA17_Chr2g0311611 47.143 70 30 1 237 299 2 71 2.31e-18 79.0
Msa1336230 MtrunA17_Chr8g0364171 33.333 123 68 2 177 299 18 126 3.05e-18 80.9
Msa1336230 MtrunA17_Chr1g0158031 32.374 139 84 4 227 360 29 162 2.03e-17 79.3
Msa1336230 MtrunA17_Chr1g0161101 42.105 95 45 2 231 324 401 486 2.96e-17 83.2
Msa1336230 MtrunA17_Chr7g0219991 39.831 118 55 3 178 294 249 351 2.99e-17 82.4
Msa1336230 MtrunA17_Chr3g0092581 35.878 131 79 3 222 348 21 150 4.26e-17 79.0
Msa1336230 MtrunA17_Chr7g0247741 25.595 336 203 11 61 379 5 310 5.36e-17 81.3
Msa1336230 MtrunA17_Chr7g0256741 25.155 322 196 11 67 369 10 305 5.77e-17 80.9
Msa1336230 MtrunA17_Chr2g0311641 30.216 139 88 3 25 162 21 151 3.06e-15 73.2
Msa1336230 MtrunA17_Chr8g0364161 32.192 146 88 6 25 167 32 169 3.21e-15 73.6
Msa1336230 MtrunA17_Chr8g0375661 30.370 135 82 4 35 165 26 152 3.36e-15 72.8
Msa1336230 MtrunA17_Chr8g0375641 30.597 134 83 4 35 165 26 152 6.27e-15 72.4
Msa1336230 MtrunA17_Chr2g0319521 46.377 69 37 0 231 299 56 124 1.30e-14 70.5
Msa1336230 MtrunA17_Chr1g0167921 46.032 63 34 0 236 298 94 156 1.68e-14 71.2
Msa1336230 MtrunA17_Chr5g0420891 30.435 138 84 5 31 166 16 143 5.40e-14 69.3
Msa1336230 MtrunA17_Chr7g0235991 26.797 153 109 3 57 206 11 163 8.31e-13 66.6
Msa1336230 MtrunA17_Chr4g0055921 41.270 63 34 1 65 127 7 66 2.45e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336230 AT2G36690.2 58.377 382 136 4 1 378 1 363 1.74e-162 460
Msa1336230 AT2G36690.1 58.377 382 136 4 1 378 1 363 1.74e-162 460
Msa1336230 AT3G60290.1 38.692 367 199 7 17 377 7 353 2.82e-85 263
Msa1336230 AT2G44800.1 38.905 347 187 6 37 377 26 353 2.44e-82 256
Msa1336230 AT4G10500.1 41.534 313 160 4 38 346 20 313 4.35e-82 254
Msa1336230 AT4G10490.1 38.720 328 176 5 38 359 18 326 4.21e-81 252
Msa1336230 AT5G07480.1 35.876 354 191 8 38 378 24 354 1.95e-72 230
Msa1336230 AT2G38240.1 35.068 365 202 10 26 379 12 352 2.26e-67 217
Msa1336230 AT5G24530.1 35.574 357 196 7 29 375 5 337 1.80e-66 214
Msa1336230 AT3G11180.1 34.770 348 204 9 35 375 64 395 2.04e-61 203
Msa1336230 AT5G05600.1 34.857 350 201 7 35 375 35 366 1.72e-60 199
Msa1336230 AT3G11180.2 34.473 351 203 10 35 374 64 398 9.37e-60 199
Msa1336230 AT1G17010.1 32.410 361 217 9 26 378 17 358 1.97e-57 191
Msa1336230 AT1G17020.1 31.389 360 222 9 26 378 17 358 8.11e-56 187
Msa1336230 AT3G55970.1 32.861 353 213 10 35 377 22 360 2.93e-55 186
Msa1336230 AT3G21420.1 33.807 352 198 10 36 372 26 357 3.21e-55 186
Msa1336230 AT1G06620.1 32.961 358 200 9 21 365 22 352 7.29e-55 185
Msa1336230 AT4G25300.1 32.500 360 217 9 26 378 16 356 4.84e-54 182
Msa1336230 AT2G30840.1 32.584 356 207 9 21 365 16 349 7.59e-54 182
Msa1336230 AT4G25310.1 34.000 350 197 9 38 378 29 353 9.13e-54 182
Msa1336230 AT5G59530.1 32.665 349 195 10 24 358 22 344 6.56e-53 180
Msa1336230 AT5G07480.2 36.680 259 139 5 131 378 1 245 1.62e-52 175
Msa1336230 AT5G43450.1 33.237 346 205 8 25 362 23 350 3.09e-52 178
Msa1336230 AT3G13610.1 29.917 361 221 8 25 378 26 361 3.92e-52 177
Msa1336230 AT5G43440.1 31.714 350 209 9 25 364 23 352 8.99e-52 177
Msa1336230 AT1G04350.1 33.721 344 202 10 21 358 17 340 1.39e-51 176
Msa1336230 AT1G55290.1 31.884 345 202 9 25 361 25 344 2.45e-51 176
Msa1336230 AT4G25420.1 33.038 339 190 8 38 362 40 355 2.54e-51 176
Msa1336230 AT4G22880.1 30.769 351 211 9 26 361 7 340 3.10e-51 175
Msa1336230 AT4G22880.2 30.769 351 211 9 26 361 7 340 3.10e-51 175
Msa1336230 AT4G22880.3 30.769 351 211 9 26 361 7 340 3.10e-51 175
Msa1336230 AT3G19010.1 32.229 332 178 8 57 363 17 326 1.57e-50 173
Msa1336230 AT3G19010.4 32.229 332 178 8 57 363 17 326 1.57e-50 173
Msa1336230 AT4G16330.2 30.233 344 208 7 41 375 41 361 2.42e-50 173
Msa1336230 AT2G30840.3 32.584 356 201 10 21 365 16 343 3.04e-50 172
Msa1336230 AT2G30830.1 30.641 359 213 10 5 353 1 333 1.38e-49 171
Msa1336230 AT5G59540.1 33.714 350 185 12 21 352 20 340 1.49e-49 171
Msa1336230 AT3G12900.1 31.025 361 219 10 5 359 1 337 2.71e-49 170
Msa1336230 AT1G78550.1 33.754 317 181 10 38 346 29 324 3.63e-49 170
Msa1336230 AT1G04380.1 31.949 313 190 6 45 352 25 319 4.95e-49 169
Msa1336230 AT3G61400.1 30.601 366 222 10 21 373 20 366 1.21e-48 169
Msa1336230 AT1G06650.2 31.405 363 204 11 21 365 21 356 1.35e-48 169
Msa1336230 AT1G77330.1 31.333 300 187 5 65 359 1 286 1.41e-48 167
Msa1336230 AT1G06645.1 30.748 361 206 11 21 365 34 366 4.24e-48 167
Msa1336230 AT5G08640.2 32.323 297 183 4 68 358 41 325 6.57e-48 166
Msa1336230 AT5G08640.1 32.323 297 183 4 68 358 41 325 6.57e-48 166
Msa1336230 AT2G06960.1 50.286 175 60 4 194 368 1 148 5.20e-47 157
Msa1336230 AT3G51240.1 31.731 312 179 9 37 337 14 302 1.31e-46 163
Msa1336230 AT1G06640.1 31.507 365 201 12 21 365 21 356 4.73e-46 162
Msa1336230 AT1G03410.2 30.423 355 203 12 21 358 15 342 8.12e-46 161
Msa1336230 AT1G15550.1 28.947 380 240 6 3 377 2 356 1.16e-45 160
Msa1336230 AT1G03400.1 30.857 350 204 10 25 365 19 339 1.74e-45 160
Msa1336230 AT1G03410.1 30.423 355 203 12 21 358 52 379 2.00e-45 161
Msa1336230 AT2G25450.1 30.319 376 218 12 5 365 1 347 3.16e-45 159
Msa1336230 AT5G12270.1 32.410 361 216 7 25 378 20 359 1.24e-44 158
Msa1336230 AT4G16330.1 33.585 265 150 5 119 375 9 255 1.86e-44 154
Msa1336230 AT5G51810.1 31.065 338 196 7 37 362 41 353 2.35e-44 157
Msa1336230 AT3G19010.3 30.120 332 155 8 57 363 17 296 2.65e-44 156
Msa1336230 AT5G05600.2 34.307 274 153 7 35 299 35 290 2.82e-43 152
Msa1336230 AT5G54000.2 30.982 326 193 8 37 350 18 323 6.88e-43 153
Msa1336230 AT1G80340.1 31.353 303 187 5 67 364 50 336 2.08e-42 152
Msa1336230 AT5G20400.1 32.450 302 178 6 59 350 37 322 2.17e-42 152
Msa1336230 AT1G49390.1 30.233 344 207 9 18 350 1 322 2.33e-42 151
Msa1336230 AT5G20550.1 30.145 345 207 9 18 350 1 323 1.10e-41 150
Msa1336230 AT3G19000.1 27.607 326 197 6 66 369 31 339 1.17e-41 150
Msa1336230 AT1G06620.2 32.639 288 157 8 21 298 22 282 1.27e-41 148
Msa1336230 AT1G60980.1 29.738 343 197 8 38 362 36 352 1.34e-41 150
Msa1336230 AT5G07200.1 28.406 345 206 7 36 362 35 356 1.98e-41 150
Msa1336230 AT3G55970.2 34.182 275 157 10 35 299 22 282 2.77e-41 147
Msa1336230 AT5G43440.2 32.143 280 164 7 25 298 23 282 1.10e-40 145
Msa1336230 AT1G78550.2 34.109 258 147 7 96 346 5 246 1.71e-40 145
Msa1336230 AT2G30840.2 32.168 286 164 7 21 298 16 279 3.83e-40 144
Msa1336230 AT5G43450.2 32.727 275 166 6 25 298 23 279 3.98e-40 144
Msa1336230 AT1G03400.2 28.571 378 204 11 25 365 19 367 2.45e-39 144
Msa1336230 AT5G54000.1 32.819 259 150 5 100 350 1 243 1.50e-38 139
Msa1336230 AT4G25420.2 32.721 272 146 8 38 295 40 288 1.64e-38 140
Msa1336230 AT1G49390.2 33.205 259 149 5 100 350 1 243 3.72e-38 138
Msa1336230 AT1G12010.1 28.866 291 178 7 64 346 4 273 6.27e-38 139
Msa1336230 AT3G51240.2 35.526 228 121 7 119 337 8 218 6.41e-38 138
Msa1336230 AT4G21200.1 31.802 283 165 8 63 338 38 299 7.41e-38 139
Msa1336230 AT1G44090.1 27.697 343 207 8 38 364 43 360 2.25e-37 139
Msa1336230 AT1G05010.1 31.469 286 164 8 67 342 4 267 2.64e-37 137
Msa1336230 AT1G04380.2 30.502 259 160 5 45 301 25 265 8.62e-37 135
Msa1336230 AT1G62380.1 27.273 308 184 8 62 359 2 279 1.70e-36 135
Msa1336230 AT4G25310.2 30.000 350 183 10 38 378 29 325 2.87e-36 135
Msa1336230 AT3G19010.2 30.855 269 141 7 57 300 17 265 3.08e-36 134
Msa1336230 AT5G59540.2 32.414 290 160 10 21 299 20 284 3.32e-36 134
Msa1336230 AT1G80330.1 28.448 348 201 12 33 359 14 334 4.08e-36 135
Msa1336230 AT2G19590.1 29.595 321 201 9 60 377 4 302 9.48e-36 133
Msa1336230 AT5G63590.1 30.717 293 180 6 64 348 11 288 1.01e-35 133
Msa1336230 AT4G25300.2 36.275 204 116 3 176 378 72 262 3.34e-35 130
Msa1336230 AT3G49620.1 29.677 310 175 11 67 349 34 327 1.64e-34 130
Msa1336230 AT3G61400.2 29.514 288 175 8 21 299 20 288 2.43e-34 129
Msa1336230 AT1G06650.1 30.104 289 169 8 21 299 21 286 1.92e-33 127
Msa1336230 AT5G63595.1 28.819 288 170 6 49 335 9 262 2.95e-33 125
Msa1336230 AT5G51810.2 30.935 278 155 7 37 302 41 293 9.84e-33 124
Msa1336230 AT1G78440.1 27.597 308 184 9 67 358 18 302 1.25e-32 125
Msa1336230 AT3G50210.4 30.201 298 171 11 67 337 8 295 1.90e-32 124
Msa1336230 AT3G50210.1 30.201 298 171 11 67 337 8 295 1.90e-32 124
Msa1336230 AT3G50210.3 30.201 298 171 11 67 337 8 295 1.90e-32 124
Msa1336230 AT5G43935.1 28.956 297 177 7 66 359 18 283 1.18e-31 121
Msa1336230 AT1G06640.2 30.303 297 170 9 21 305 21 292 1.69e-31 122
Msa1336230 AT1G06640.3 30.662 287 162 9 21 295 21 282 1.98e-31 120
Msa1336230 AT3G49630.1 28.956 297 171 9 67 337 9 291 2.65e-31 121
Msa1336230 AT5G63600.1 27.869 305 185 7 56 350 22 301 7.64e-31 120
Msa1336230 AT3G49630.3 29.779 272 161 8 82 337 30 287 1.25e-30 119
Msa1336230 AT5G63600.2 28.477 302 188 8 56 350 22 302 2.81e-30 119
Msa1336230 AT1G50960.1 28.772 285 182 8 44 324 19 286 3.45e-30 119
Msa1336230 AT4G21690.1 26.102 295 192 6 87 368 61 342 5.27e-30 118
Msa1336230 AT3G19000.2 26.136 264 156 6 66 307 31 277 7.18e-29 114
Msa1336230 AT1G30040.1 27.124 306 185 10 67 358 31 312 6.62e-28 112
Msa1336230 AT3G46500.5 30.323 310 171 9 74 359 21 309 9.03e-27 109
Msa1336230 AT1G02400.1 26.403 303 193 8 60 350 17 301 4.00e-26 107
Msa1336230 AT1G52820.1 25.776 322 197 11 65 369 10 306 4.12e-26 107
Msa1336230 AT5G63580.2 30.196 255 152 6 54 299 3 240 4.21e-26 105
Msa1336230 AT5G63580.1 30.435 253 150 6 54 297 3 238 5.34e-26 105
Msa1336230 AT2G19590.2 29.577 284 175 9 97 377 26 287 4.73e-25 103
Msa1336230 AT2G34555.1 27.532 316 196 10 67 372 27 319 1.84e-24 103
Msa1336230 AT3G46500.7 31.408 277 145 10 74 326 21 276 2.43e-22 96.3
Msa1336230 AT1G47990.1 28.383 303 177 11 67 353 15 293 2.87e-22 96.7
Msa1336230 AT1G14130.1 26.766 269 177 5 85 350 24 275 4.76e-22 95.9
Msa1336230 AT4G23340.1 26.235 324 193 9 64 369 7 302 1.06e-21 95.1
Msa1336230 AT1G28030.1 27.019 322 197 11 65 369 11 311 1.56e-21 94.7
Msa1336230 AT5G51310.1 27.500 280 172 7 64 331 2 262 7.96e-21 92.4
Msa1336230 AT4G03070.1 25.538 325 197 13 64 368 11 310 9.38e-21 92.4
Msa1336230 AT3G50210.2 33.918 171 102 5 169 337 52 213 9.83e-21 90.9
Msa1336230 AT4G22870.1 45.263 95 51 1 268 361 2 96 1.05e-20 87.0
Msa1336230 AT3G46490.1 27.129 317 181 10 74 360 21 317 5.79e-20 90.1
Msa1336230 AT3G49630.2 28.634 227 134 8 125 337 6 218 6.65e-20 88.6
Msa1336230 AT3G47190.1 24.096 332 200 9 47 362 16 311 2.03e-19 88.6
Msa1336230 AT1G14120.2 25.850 294 195 4 60 350 1 274 5.07e-19 87.4
Msa1336230 AT1G14120.1 25.850 294 195 4 60 350 1 274 5.07e-19 87.4
Msa1336230 AT1G14120.3 25.850 294 195 4 60 350 1 274 5.07e-19 87.4
Msa1336230 AT3G46500.4 42.241 116 61 2 250 360 60 174 6.35e-19 84.3
Msa1336230 AT3G46500.10 42.241 116 61 2 250 360 122 236 2.39e-18 84.3
Msa1336230 AT3G46500.1 42.241 116 61 2 250 360 122 236 2.39e-18 84.3
Msa1336230 AT3G46490.2 28.975 283 151 10 74 326 21 283 4.09e-18 84.7
Msa1336230 AT4G22870.2 40.816 98 54 2 268 361 40 137 9.22e-18 80.1
Msa1336230 AT5G58660.1 24.281 313 178 11 60 338 27 314 1.12e-17 84.0
Msa1336230 AT3G46480.1 41.880 117 62 2 249 360 155 270 1.97e-16 79.3
Msa1336230 AT1G30040.2 26.316 247 144 10 67 299 31 253 1.60e-15 76.3
Msa1336230 AT4G16765.5 34.043 188 102 7 176 350 3 181 1.71e-15 75.1
Msa1336230 AT1G52820.2 23.904 251 151 8 65 299 10 236 1.87e-15 76.3
Msa1336230 AT4G16765.3 43.119 109 54 3 248 350 121 227 2.56e-15 75.1
Msa1336230 AT1G35190.2 41.071 112 60 2 254 360 179 289 3.55e-15 75.9
Msa1336230 AT1G35190.1 41.071 112 60 2 254 360 202 312 4.43e-15 75.9
Msa1336230 AT4G03050.2 32.540 126 83 2 246 369 271 396 4.45e-15 76.6
Msa1336230 AT4G03050.1 32.540 126 83 2 246 369 271 396 4.45e-15 76.6
Msa1336230 AT4G23340.2 28.058 139 96 2 235 369 46 184 9.14e-15 73.2
Msa1336230 AT4G16765.6 42.202 109 55 3 248 350 121 227 9.14e-15 73.9
Msa1336230 AT4G16765.1 42.202 109 55 3 248 350 121 227 9.14e-15 73.9
Msa1336230 AT4G16765.2 42.202 109 55 3 248 350 121 227 9.14e-15 73.9
Msa1336230 AT1G52800.1 24.149 323 202 11 66 371 9 305 1.38e-14 74.3
Msa1336230 AT3G46500.6 51.220 82 34 3 250 326 91 171 4.57e-14 70.9
Msa1336230 AT3G46500.8 51.220 82 34 3 250 326 91 171 4.57e-14 70.9
Msa1336230 AT3G46500.3 51.220 82 34 3 250 326 122 202 8.31e-14 70.5
Msa1336230 AT1G15540.1 24.471 331 203 12 61 370 3 307 2.48e-13 70.9
Msa1336230 AT1G15540.4 24.471 331 203 12 61 370 3 307 2.48e-13 70.9
Msa1336230 AT1G15540.2 24.471 331 203 12 61 370 6 310 2.58e-13 70.5
Msa1336230 AT1G15540.3 24.471 331 203 12 61 370 10 314 2.90e-13 70.5
Msa1336230 AT1G02400.2 22.472 267 178 7 60 315 17 265 4.77e-12 66.2
Msa1336230 AT3G46500.9 40.000 100 54 2 266 360 114 212 9.45e-12 64.7

Find 101 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCCCTAAACTTTCT+AGG 0.166620 tig0000808:+27707 Msa1336230:intergenic
ATTGATTTCACTGATCTTAT+TGG 0.180414 tig0000808:-29864 Msa1336230:CDS
TCAAGAGCTTGTAGCCTATT+TGG 0.181404 tig0000808:+29840 Msa1336230:intergenic
TTTCTTTGGCCTCCTCTTCT+TGG 0.203445 tig0000808:+27677 Msa1336230:intergenic
CCTAGAAAGTTTAGGGATTA+TGG 0.212781 tig0000808:-27707 Msa1336230:CDS
AAGATCAGTGAAATCAATTA+TGG 0.215332 tig0000808:+29869 Msa1336230:intergenic
TATATGGATATGGTTCAAAA+TGG 0.224430 tig0000808:+30459 Msa1336230:intergenic
TAAGCCATTTGTCTTGATAT+TGG 0.252422 tig0000808:+27482 Msa1336230:intergenic
TTTGTAATCCTTTGCCTGAT+TGG 0.263926 tig0000808:-28611 Msa1336230:CDS
AATGCTTTCGTTGTCAATAT+TGG 0.274398 tig0000808:-27442 Msa1336230:CDS
GCTGGAAACATATACTTCTT+TGG 0.283677 tig0000808:+29957 Msa1336230:intergenic
TTCTCTTCATCAATGAGTTT+TGG 0.284155 tig0000808:+26810 Msa1336230:intergenic
ACATTTGTTCTTGACAATAA+TGG 0.292679 tig0000808:-27737 Msa1336230:CDS
ATGCACCCTCACTCTGATTA+TGG 0.304528 tig0000808:-27550 Msa1336230:CDS
CACAAGAGAAACCAAGAAAA+AGG 0.313151 tig0000808:-26736 Msa1336230:CDS
GAAGCCATCCTAGAAAGTTT+AGG 0.318147 tig0000808:-27715 Msa1336230:CDS
CTGATCTTATTGGTCCAAAT+AGG 0.329604 tig0000808:-29854 Msa1336230:CDS
AAGCCATCCTAGAAAGTTTA+GGG 0.338086 tig0000808:-27714 Msa1336230:CDS
TCATCATTCATTGCCATTGC+AGG 0.339725 tig0000808:+30065 Msa1336230:intergenic
GCCAATGCTTGTGAACAATA+TGG 0.342407 tig0000808:-29810 Msa1336230:CDS
CCAAGGGTTAGGTCTGGTTC+AGG 0.342949 tig0000808:+27574 Msa1336230:intergenic
ACCTTAGGTTGAGAAATATA+TGG 0.357543 tig0000808:+30443 Msa1336230:intergenic
GGTTGAGAAATATATGGATA+TGG 0.359227 tig0000808:+30449 Msa1336230:intergenic
CAATATTGGTGATCATTTAG+AGG 0.360710 tig0000808:-27428 Msa1336230:intron
TAATAATATTATGAAAGAAT+TGG 0.362638 tig0000808:-27641 Msa1336230:CDS
ACAACGAAAGCATTGGGAAT+AGG 0.371236 tig0000808:+27451 Msa1336230:intergenic
AATGGGGAGGCAGGCCAATC+AGG 0.371866 tig0000808:+28597 Msa1336230:intergenic
ATATGGATATGGTTCAAAAT+GGG 0.380563 tig0000808:+30460 Msa1336230:intergenic
TTTGGTTTCTTCTGCATAGC+TGG 0.380859 tig0000808:+27759 Msa1336230:intergenic
TATTGTCAAGAACAAATGTT+TGG 0.389089 tig0000808:+27741 Msa1336230:intergenic
ATGAGAGCAGCTGTGAGATA+TGG 0.390983 tig0000808:-28693 Msa1336230:CDS
ATCATCATCTATACTCTTTG+TGG 0.391090 tig0000808:+29923 Msa1336230:intergenic
TGATTGGCCTGCCTCCCCAT+TGG 0.400016 tig0000808:-28595 Msa1336230:CDS
TTTGGCCTCCTCTTCTTGGT+TGG 0.413308 tig0000808:+27681 Msa1336230:intergenic
CAAAATGGGGCTTAGAAAGT+TGG 0.414678 tig0000808:+30474 Msa1336230:intergenic
GAGTGTATTACATAGGGTTC+TGG 0.416452 tig0000808:-26907 Msa1336230:CDS
GTGAAGCATTTGTATGAGAA+AGG 0.418269 tig0000808:-29996 Msa1336230:CDS
ATTAGATATTGAAGTGATCA+AGG 0.422513 tig0000808:-26635 Msa1336230:three_prime_UTR
TCTGTGTCCATGTAACGCTT+TGG 0.429309 tig0000808:+26786 Msa1336230:intergenic
TTTGTGGGTCTTTCTGAAGC+TGG 0.435964 tig0000808:+29939 Msa1336230:intergenic
GCAAACCCTCTACTTCATCT+TGG 0.436198 tig0000808:+27509 Msa1336230:intergenic
GTTAGGTCTGGTTCAGGGCA+TGG 0.437319 tig0000808:+27580 Msa1336230:intergenic
TCCATATTGTTCACAAGCAT+TGG 0.440200 tig0000808:+29809 Msa1336230:intergenic
TGCATTCCAAGGGTTAGGTC+TGG 0.442740 tig0000808:+27568 Msa1336230:intergenic
TGAGAGCAGCTGTGAGATAT+GGG 0.459658 tig0000808:-28692 Msa1336230:CDS
CAAAAGACTCAGTGTTCTGT+TGG 0.465360 tig0000808:-28653 Msa1336230:CDS
AGATCAGTGAAATCAATTAT+GGG 0.469482 tig0000808:+29870 Msa1336230:intergenic
TGAAAGTCCAATGGGGAGGC+AGG 0.469731 tig0000808:+28588 Msa1336230:intergenic
ACACTTACTGAAAGTCCAAT+GGG 0.477635 tig0000808:+28580 Msa1336230:intergenic
TGAGAAAGGTTATCTTCATA+AGG 0.478022 tig0000808:-29982 Msa1336230:CDS
AAATCCAATATCAAGACAAA+TGG 0.490894 tig0000808:-27486 Msa1336230:CDS
ATAGAAAGTGAATATCATAA+AGG 0.491733 tig0000808:-30020 Msa1336230:CDS
AGGAGCATCATAGATGTTGT+AGG 0.494826 tig0000808:-28768 Msa1336230:CDS
AAGATTCTTCGATCTTCCAT+TGG 0.494960 tig0000808:-28745 Msa1336230:CDS
ATTCTTCGATCTTCCATTGG+AGG 0.496137 tig0000808:-28742 Msa1336230:CDS
TCCATATATTTCTCAACCTA+AGG 0.502086 tig0000808:-30444 Msa1336230:intron
TTATGAAAGAATTGGACAAT+GGG 0.508435 tig0000808:-27633 Msa1336230:CDS
AATATTGACAACGAAAGCAT+TGG 0.511145 tig0000808:+27444 Msa1336230:intergenic
GAGGGTGCATTCCAAGGGTT+AGG 0.514102 tig0000808:+27563 Msa1336230:intergenic
AATACAAGAGTGTATTACAT+AGG 0.514652 tig0000808:-26914 Msa1336230:CDS
TGGAAATTGAGAAAGAAGGT+TGG 0.520757 tig0000808:+30494 Msa1336230:intergenic
GGTCTGGTTCAGGGCATGGT+GGG 0.524285 tig0000808:+27584 Msa1336230:intergenic
GGTCTCACAGTGCAGTCAAA+AGG 0.526151 tig0000808:+26837 Msa1336230:intergenic
ATTATGAAAGAATTGGACAA+TGG 0.526425 tig0000808:-27634 Msa1336230:CDS
TCATCATCTATACTCTTTGT+GGG 0.526523 tig0000808:+29924 Msa1336230:intergenic
CAGAGTGAGGGTGCATTCCA+AGG 0.530113 tig0000808:+27557 Msa1336230:intergenic
CAAGGGTTAGGTCTGGTTCA+GGG 0.530803 tig0000808:+27575 Msa1336230:intergenic
AAGACTCAGTGTTCTGTTGG+AGG 0.531960 tig0000808:-28650 Msa1336230:CDS
ATATTGACAACGAAAGCATT+GGG 0.534396 tig0000808:+27445 Msa1336230:intergenic
AATCCCTAAACTTTCTAGGA+TGG 0.536503 tig0000808:+27711 Msa1336230:intergenic
AAGTTGGAAATTGAGAAAGA+AGG 0.541319 tig0000808:+30490 Msa1336230:intergenic
AGAGAATCCAAAGCGTTACA+TGG 0.543467 tig0000808:-26793 Msa1336230:CDS
TGATGATTCAAATGTTGCTA+AGG 0.546499 tig0000808:-29907 Msa1336230:CDS
TACTTAGCTCTCTCCTCCAA+TGG 0.547880 tig0000808:+28729 Msa1336230:intergenic
AGGTCTGGTTCAGGGCATGG+TGG 0.548005 tig0000808:+27583 Msa1336230:intergenic
AACCCTCTACTTCATCTTGG+AGG 0.550913 tig0000808:+27512 Msa1336230:intergenic
GGACAATGGGAGCCAGATGT+TGG 0.553902 tig0000808:-27620 Msa1336230:CDS
AGACTCAGTGTTCTGTTGGA+GGG 0.559012 tig0000808:-28649 Msa1336230:CDS
ATACAAGAGTGTATTACATA+GGG 0.568540 tig0000808:-26913 Msa1336230:CDS
GTTACTTATGTCTCCTGCAA+TGG 0.578857 tig0000808:-30078 Msa1336230:exon
AACACTTACTGAAAGTCCAA+TGG 0.582866 tig0000808:+28579 Msa1336230:intergenic
AGCTAAGAGCAGAGTATCAG+TGG 0.587185 tig0000808:-26877 Msa1336230:CDS
GAGGCAGGCCAATCAGGCAA+AGG 0.590329 tig0000808:+28603 Msa1336230:intergenic
TATGGATATGGTTCAAAATG+GGG 0.590490 tig0000808:+30461 Msa1336230:intergenic
CCTGAACCAGACCTAACCCT+TGG 0.596646 tig0000808:-27574 Msa1336230:CDS
CTCCTCCAAGATGAAGTAGA+GGG 0.601405 tig0000808:-27514 Msa1336230:CDS
TTAGATATTGAAGTGATCAA+GGG 0.611034 tig0000808:-26634 Msa1336230:three_prime_UTR
TCTCCTCCAAGATGAAGTAG+AGG 0.615685 tig0000808:-27515 Msa1336230:CDS
TCACAGTGCAGTCAAAAGGA+AGG 0.626843 tig0000808:+26841 Msa1336230:intergenic
ATTTATCAGATATTTAGCAA+CGG 0.627515 tig0000808:-26939 Msa1336230:intron
AGAGTGAGGGTGCATTCCAA+GGG 0.630347 tig0000808:+27558 Msa1336230:intergenic
TATGGAAGCCAACCAAGAAG+AGG 0.632911 tig0000808:-27689 Msa1336230:CDS
AGGAAGCCATAATCAGAGTG+AGG 0.633988 tig0000808:+27544 Msa1336230:intergenic
GGAAGCCAACCAAGAAGAGG+AGG 0.638943 tig0000808:-27686 Msa1336230:CDS
CAATGGCAATGAATGATGAA+AGG 0.647114 tig0000808:-30061 Msa1336230:CDS
GGAAGCCATAATCAGAGTGA+GGG 0.666717 tig0000808:+27545 Msa1336230:intergenic
AATGAATGATGAAAGGAGTG+AGG 0.683347 tig0000808:-30054 Msa1336230:CDS
CATCTTGGAGGAGAAGTGTG+AGG 0.689367 tig0000808:+27524 Msa1336230:intergenic
TTACTGAAAGTCCAATGGGG+AGG 0.691760 tig0000808:+28584 Msa1336230:intergenic
ACATATCAGATGATATAACA+AGG 0.708459 tig0000808:-28788 Msa1336230:CDS
CACTTACTGAAAGTCCAATG+GGG 0.774600 tig0000808:+28581 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATAATAATATGAATTA+AGG + tig0000808:28593-28612 Msa1336230:intergenic 10.0%
!!! ATATTATTATTTCATTGATT+TGG - tig0000808:28599-28618 Msa1336230:CDS 10.0%
!!! TTTTGTTAATTAATCAAATT+TGG - tig0000808:28694-28713 Msa1336230:CDS 10.0%
!! CAAAAAATATTAAAATAGTA+AGG - tig0000808:28735-28754 Msa1336230:CDS 10.0%
!! TAATAATATTATGAAAGAAT+TGG - tig0000808:29486-29505 Msa1336230:intron 10.0%
!!! TTAATGTTAGTTTATTAATT+TGG + tig0000808:29776-29795 Msa1336230:intergenic 10.0%
!!! TTTTTTTTTATAGTCAAAGT+TGG - tig0000808:26787-26806 Msa1336230:CDS 15.0%
!!! TTTTTTTTATAGTCAAAGTT+GGG - tig0000808:26788-26807 Msa1336230:CDS 15.0%
!!! TTGATATAATTTACTTTTAC+AGG - tig0000808:27027-27046 Msa1336230:intron 15.0%
!! TCAAAATCTACATTTAAATT+TGG + tig0000808:27627-27646 Msa1336230:intergenic 15.0%
!!! AATGTAGATTTTGATTTTAA+AGG - tig0000808:27633-27652 Msa1336230:CDS 15.0%
!!! TATTTTTTTTAGGAGAAATA+AGG + tig0000808:27998-28017 Msa1336230:intergenic 15.0%
!!! GTCTAACTTTTATTTTTTTT+AGG + tig0000808:28008-28027 Msa1336230:intergenic 15.0%
!! TTGTAAATCATTATTCAAAA+TGG - tig0000808:28844-28863 Msa1336230:intron 15.0%
!!! TTGTTACTATTATTTTAAAC+AGG - tig0000808:29335-29354 Msa1336230:intron 15.0%
!!! TGTTACTATTATTTTAAACA+GGG - tig0000808:29336-29355 Msa1336230:intron 15.0%
!! ATTAATAAACTAACTCATAT+GGG - tig0000808:29791-29810 Msa1336230:intron 15.0%
!!! AATTGTAAACATTTTTTGAA+TGG + tig0000808:29865-29884 Msa1336230:intergenic 15.0%
!!! CAAAAAATGTTTACAATTTT+TGG - tig0000808:29867-29886 Msa1336230:CDS 15.0%
!! TTTAAGAAAAAAAATCTTTG+AGG - tig0000808:29953-29972 Msa1336230:CDS 15.0%
!!! TTTTTTTATAGTCAAAGTTG+GGG - tig0000808:26789-26808 Msa1336230:CDS 20.0%
!! ATAGAAAGTGAATATCATAA+AGG - tig0000808:27107-27126 Msa1336230:intron 20.0%
!! ATAGTATTTGATTCTTGTTA+GGG + tig0000808:27509-27528 Msa1336230:intergenic 20.0%
!! TATAGTATTTGATTCTTGTT+AGG + tig0000808:27510-27529 Msa1336230:intergenic 20.0%
!! TTCCTAGAAAAATTTCAATT+TGG - tig0000808:27744-27763 Msa1336230:CDS 20.0%
!!! GCTATATTCGATTTTTATAT+TGG - tig0000808:27927-27946 Msa1336230:intron 20.0%
!! TATTGGTCATAATTCATTTA+AGG - tig0000808:27944-27963 Msa1336230:intron 20.0%
!!! CTAACTTGTTTTTATAAAGA+AGG + tig0000808:27974-27993 Msa1336230:intergenic 20.0%
!! GTCTCACATATATTAAAATA+AGG + tig0000808:28030-28049 Msa1336230:intergenic 20.0%
!! TAGTTTATGTATATGAATGT+CGG - tig0000808:28095-28114 Msa1336230:intron 20.0%
!! AATTAATCAAATTTGGTTAC+AGG - tig0000808:28701-28720 Msa1336230:CDS 20.0%
!!! TATCAATGTGTAGAATTTTA+AGG + tig0000808:28780-28799 Msa1336230:intergenic 20.0%
!! TAGTTCAATACTATGTAAAT+TGG - tig0000808:28804-28823 Msa1336230:CDS 20.0%
!! TTATTAATTTCTAACGTTAG+AGG - tig0000808:28872-28891 Msa1336230:intron 20.0%
!!! CTTATTTTTCTATGAAACTT+AGG - tig0000808:28964-28983 Msa1336230:intron 20.0%
!!! TAAATTAGTCTTTGAAATTG+TGG + tig0000808:29253-29272 Msa1336230:intergenic 20.0%
!! CATTAATAAACTAACTCATA+TGG - tig0000808:29790-29809 Msa1336230:intron 20.0%
!! ATTTATCAGATATTTAGCAA+CGG - tig0000808:30188-30207 Msa1336230:intron 20.0%
!!! TTATGTGTATGTTAATTTTC+TGG + tig0000808:30429-30448 Msa1336230:intergenic 20.0%
! ATATGGATATGGTTCAAAAT+GGG + tig0000808:26670-26689 Msa0331900:intergenic 25.0%
! TATATGGATATGGTTCAAAA+TGG + tig0000808:26671-26690 Msa0331900:intergenic 25.0%
!! TTTTCCAAGTTAATTACCTT+AGG + tig0000808:26702-26721 Msa1336230:intergenic 25.0%
! TTATATATGGATCAATCTTC+AGG + tig0000808:26883-26902 Msa1336230:intergenic 25.0%
! CATGAACATGTGTTTATATA+TGG + tig0000808:26896-26915 Msa1336230:intergenic 25.0%
! AGATCAGTGAAATCAATTAT+GGG + tig0000808:27260-27279 Msa1336230:intergenic 25.0%
! AAGATCAGTGAAATCAATTA+TGG + tig0000808:27261-27280 Msa1336230:intergenic 25.0%
!! ATTGATTTCACTGATCTTAT+TGG - tig0000808:27263-27282 Msa1336230:intron 25.0%
! TGTTTAAACTGTAATGTCTT+AGG - tig0000808:27382-27401 Msa1336230:intron 25.0%
!! TCATTGTCTTTTCTATTAAC+AGG - tig0000808:27446-27465 Msa1336230:CDS 25.0%
!! CTCCAAATTGAAATTTTTCT+AGG + tig0000808:27749-27768 Msa1336230:intergenic 25.0%
! TATTGCTGGACAAATAAATT+AGG + tig0000808:27839-27858 Msa1336230:intergenic 25.0%
! AACTTTGTCTTTAATATACG+TGG - tig0000808:28230-28249 Msa1336230:intron 25.0%
! ACTTTGTCTTTAATATACGT+GGG - tig0000808:28231-28250 Msa1336230:intron 25.0%
! ACATATCAGATGATATAACA+AGG - tig0000808:28339-28358 Msa1336230:intron 25.0%
! AATCAAAGCAAATTCATCAA+TGG - tig0000808:28638-28657 Msa1336230:CDS 25.0%
! ATCAAAGCAAATTCATCAAT+GGG - tig0000808:28639-28658 Msa1336230:CDS 25.0%
!! TAGGTAAATATACTTGCTAA+TGG - tig0000808:29007-29026 Msa1336230:intron 25.0%
!! ACAAATTAGTTCTTGTATGA+TGG - tig0000808:29042-29061 Msa1336230:intron 25.0%
!! GACATCAATTAACAGTTTTT+GGG + tig0000808:29231-29250 Msa1336230:intergenic 25.0%
!!! TATTATTTTAAACAGGGAAG+TGG - tig0000808:29342-29361 Msa1336230:intron 25.0%
! TATTGTCAAGAACAAATGTT+TGG + tig0000808:29389-29408 Msa1336230:intergenic 25.0%
! ACATTTGTTCTTGACAATAA+TGG - tig0000808:29390-29409 Msa1336230:intron 25.0%
!!! ATTGTTGTTGTCATTTTCTT+TGG + tig0000808:29467-29486 Msa1336230:intergenic 25.0%
! ATTATGAAAGAATTGGACAA+TGG - tig0000808:29493-29512 Msa1336230:intron 25.0%
! TTATGAAAGAATTGGACAAT+GGG - tig0000808:29494-29513 Msa1336230:intron 25.0%
! AAATCCAATATCAAGACAAA+TGG - tig0000808:29641-29660 Msa1336230:intron 25.0%
!! AATCTTATTTGAGGTAATGT+GGG + tig0000808:29893-29912 Msa1336230:intergenic 25.0%
!! TAATCTTATTTGAGGTAATG+TGG + tig0000808:29894-29913 Msa1336230:intergenic 25.0%
!! TGAAAAGGTAATCTTATTTG+AGG + tig0000808:29902-29921 Msa1336230:intergenic 25.0%
!! CAAATAAGATTACCTTTTCA+TGG - tig0000808:29902-29921 Msa1336230:CDS 25.0%
! AATAGAATTCTTCCATGAAA+AGG + tig0000808:29917-29936 Msa1336230:intergenic 25.0%
! TATGAATTGAATCATTTGAG+TGG - tig0000808:30080-30099 Msa1336230:exon 25.0%
!!! TGTACTGACTTTTTTTATGT+TGG - tig0000808:30160-30179 Msa1336230:intron 25.0%
!! AATACAAGAGTGTATTACAT+AGG - tig0000808:30213-30232 Msa1336230:intron 25.0%
!! ATACAAGAGTGTATTACATA+GGG - tig0000808:30214-30233 Msa1336230:intron 25.0%
! ATTAGATATTGAAGTGATCA+AGG - tig0000808:30492-30511 Msa1336230:five_prime_UTR 25.0%
AAGTTGGAAATTGAGAAAGA+AGG + tig0000808:26640-26659 Msa0331900:intergenic 30.0%
TATGGATATGGTTCAAAATG+GGG + tig0000808:26669-26688 Msa0331900:intergenic 30.0%
GGTTGAGAAATATATGGATA+TGG + tig0000808:26681-26700 Msa0331900:intergenic 30.0%
TCCATATATTTCTCAACCTA+AGG - tig0000808:26683-26702 Msa1336230:exon 30.0%
!! ACCTTAGGTTGAGAAATATA+TGG + tig0000808:26687-26706 Msa1336230:intergenic 30.0%
TCAACCTAAGGTAATTAACT+TGG - tig0000808:26695-26714 Msa1336230:exon 30.0%
TGAGAAAGGTTATCTTCATA+AGG - tig0000808:27145-27164 Msa1336230:intron 30.0%
TCATCATCTATACTCTTTGT+GGG + tig0000808:27206-27225 Msa1336230:intergenic 30.0%
ATCATCATCTATACTCTTTG+TGG + tig0000808:27207-27226 Msa1336230:intergenic 30.0%
TGATGATTCAAATGTTGCTA+AGG - tig0000808:27220-27239 Msa1336230:intron 30.0%
! TGAACAATATGGATTTTTCC+AGG - tig0000808:27328-27347 Msa1336230:intron 30.0%
ATCAAATACTATATCCCTTG+TGG - tig0000808:27517-27536 Msa1336230:CDS 30.0%
ACACACACATTCAATTACAT+CGG - tig0000808:27575-27594 Msa1336230:CDS 30.0%
TGTCTTTATGTTGTCTAATG+TGG - tig0000808:27711-27730 Msa1336230:CDS 30.0%
GTCTTTATGTTGTCTAATGT+GGG - tig0000808:27712-27731 Msa1336230:CDS 30.0%
CCAGCAATAAATTGAATAGA+CGG - tig0000808:27850-27869 Msa1336230:intron 30.0%
CAGCAATAAATTGAATAGAC+GGG - tig0000808:27851-27870 Msa1336230:intron 30.0%
AATATAGCTCAACATGCATT+AGG + tig0000808:27915-27934 Msa1336230:intergenic 30.0%
TCTTTAATATACGTGGGATT+TGG - tig0000808:28237-28256 Msa1336230:intron 30.0%
GAGAATGAATGTTATTGTGT+TGG - tig0000808:28293-28312 Msa1336230:intron 30.0%
CATGTTCAAGACAAATTTGT+AGG - tig0000808:28988-29007 Msa1336230:intron 30.0%
ACTTGCCTAAAAAAAGACTA+TGG + tig0000808:29122-29141 Msa1336230:intergenic 30.0%
! GGACATCAATTAACAGTTTT+TGG + tig0000808:29232-29251 Msa1336230:intergenic 30.0%
AAAAATTGGTTACCAACATC+TGG + tig0000808:29522-29541 Msa1336230:intergenic 30.0%
TAAGCCATTTGTCTTGATAT+TGG + tig0000808:29648-29667 Msa1336230:intergenic 30.0%
!! ATATTGACAACGAAAGCATT+GGG + tig0000808:29685-29704 Msa1336230:intergenic 30.0%
! AATATTGACAACGAAAGCAT+TGG + tig0000808:29686-29705 Msa1336230:intergenic 30.0%
AATGCTTTCGTTGTCAATAT+TGG - tig0000808:29685-29704 Msa1336230:intron 30.0%
! CAATATTGGTGATCATTTAG+AGG - tig0000808:29699-29718 Msa1336230:intron 30.0%
TGTTACGTGCAAATGATATT+TGG - tig0000808:29987-30006 Msa1336230:CDS 30.0%
!!! ACTGACTTTTTTTATGTTGG+TGG - tig0000808:30163-30182 Msa1336230:intron 30.0%
! TTCTCTTCATCAATGAGTTT+TGG + tig0000808:30320-30339 Msa1336230:intergenic 30.0%
! ATGTTAATTTTCTGGACTCT+AGG + tig0000808:30421-30440 Msa1336230:intergenic 30.0%
CATTCTTGCAAGATTACACA+TGG - tig0000808:26992-27011 Msa1336230:intron 35.0%
CAATGGCAATGAATGATGAA+AGG - tig0000808:27066-27085 Msa1336230:intron 35.0%
AATGAATGATGAAAGGAGTG+AGG - tig0000808:27073-27092 Msa1336230:intron 35.0%
! GTGAAGCATTTGTATGAGAA+AGG - tig0000808:27131-27150 Msa1336230:intron 35.0%
GCTGGAAACATATACTTCTT+TGG + tig0000808:27173-27192 Msa1336230:intergenic 35.0%
CTGATCTTATTGGTCCAAAT+AGG - tig0000808:27273-27292 Msa1336230:intron 35.0%
TCCATATTGTTCACAAGCAT+TGG + tig0000808:27321-27340 Msa1336230:intergenic 35.0%
! CAATATGGATTTTTCCAGGT+AGG - tig0000808:27332-27351 Msa1336230:intron 35.0%
! GATTTTTCCAGGTAGGAAAT+TGG - tig0000808:27339-27358 Msa1336230:intron 35.0%
TTGTTTACCAATTTCCTACC+TGG + tig0000808:27349-27368 Msa1336230:intergenic 35.0%
TACTATATCCCTTGTGGATT+TGG - tig0000808:27523-27542 Msa1336230:CDS 35.0%
CCGTCTATTCAATTTATTGC+TGG + tig0000808:27853-27872 Msa1336230:intergenic 35.0%
AAGATTCTTCGATCTTCCAT+TGG - tig0000808:28382-28401 Msa1336230:intron 35.0%
!! GTCTTTTGTTTGACTGAAAC+TGG + tig0000808:28462-28481 Msa1336230:intergenic 35.0%
TTTGTAATCCTTTGCCTGAT+TGG - tig0000808:28516-28535 Msa1336230:intron 35.0%
ACACTTACTGAAAGTCCAAT+GGG + tig0000808:28550-28569 Msa1336230:intergenic 35.0%
AACACTTACTGAAAGTCCAA+TGG + tig0000808:28551-28570 Msa1336230:intergenic 35.0%
ACTATAAGATAGACCCCAAT+GGG + tig0000808:28666-28685 Msa1336230:intergenic 35.0%
TACTATAAGATAGACCCCAA+TGG + tig0000808:28667-28686 Msa1336230:intergenic 35.0%
! TTAGTTCTTGTATGATGGTG+TGG - tig0000808:29047-29066 Msa1336230:intron 35.0%
TGCCTAAAAAAAGACTATGG+CGG + tig0000808:29119-29138 Msa1336230:intergenic 35.0%
!! TATTTTAAACAGGGAAGTGG+TGG - tig0000808:29345-29364 Msa1336230:intron 35.0%
AAGCCATCCTAGAAAGTTTA+GGG - tig0000808:29413-29432 Msa1336230:intron 35.0%
! AATCCCTAAACTTTCTAGGA+TGG + tig0000808:29419-29438 Msa1336230:intergenic 35.0%
CCATAATCCCTAAACTTTCT+AGG + tig0000808:29423-29442 Msa1336230:intergenic 35.0%
CCTAGAAAGTTTAGGGATTA+TGG - tig0000808:29420-29439 Msa1336230:intron 35.0%
ACTCATATGGGTTTAGTAGA+AGG - tig0000808:29803-29822 Msa1336230:CDS 35.0%
!! TCATCAATGAGTTTTGGTGA+CGG + tig0000808:30314-30333 Msa1336230:intergenic 35.0%
! CTTTTTCTTGGTTTCTCTTG+TGG + tig0000808:30393-30412 Msa1336230:intergenic 35.0%
CACAAGAGAAACCAAGAAAA+AGG - tig0000808:30391-30410 Msa1336230:intron 35.0%
!! CTCTAGGAAATCCTTTTTCT+TGG + tig0000808:30405-30424 Msa1336230:intergenic 35.0%
CAAAATGGGGCTTAGAAAGT+TGG + tig0000808:26656-26675 Msa0331900:intergenic 40.0%
GTTACTTATGTCTCCTGCAA+TGG - tig0000808:27049-27068 Msa1336230:intron 40.0%
TCATCATTCATTGCCATTGC+AGG + tig0000808:27065-27084 Msa1336230:intergenic 40.0%
TCAAGAGCTTGTAGCCTATT+TGG + tig0000808:27290-27309 Msa1336230:intergenic 40.0%
GCCAATGCTTGTGAACAATA+TGG - tig0000808:27317-27336 Msa1336230:intron 40.0%
CACACAATCCAAATCCACAA+GGG + tig0000808:27534-27553 Msa1336230:intergenic 40.0%
ACACACAATCCAAATCCACA+AGG + tig0000808:27535-27554 Msa1336230:intergenic 40.0%
ATCAATGTAGCGACTGATTG+AGG - tig0000808:27658-27677 Msa1336230:CDS 40.0%
!! AGGAGCATCATAGATGTTGT+AGG - tig0000808:28359-28378 Msa1336230:intron 40.0%
ATTCTTCGATCTTCCATTGG+AGG - tig0000808:28385-28404 Msa1336230:intron 40.0%
CAAAAGACTCAGTGTTCTGT+TGG - tig0000808:28474-28493 Msa1336230:intron 40.0%
CACTTACTGAAAGTCCAATG+GGG + tig0000808:28549-28568 Msa1336230:intergenic 40.0%
AATTCATCAATGGGTCCCAT+TGG - tig0000808:28648-28667 Msa1336230:CDS 40.0%
ATTCATCAATGGGTCCCATT+GGG - tig0000808:28649-28668 Msa1336230:CDS 40.0%
AACGTATAGTGTCACATGTC+TGG + tig0000808:28914-28933 Msa1336230:intergenic 40.0%
! TTTGGTTTCTTCTGCATAGC+TGG + tig0000808:29371-29390 Msa1336230:intergenic 40.0%
GAAGCCATCCTAGAAAGTTT+AGG - tig0000808:29412-29431 Msa1336230:intron 40.0%
!! ACAACGAAAGCATTGGGAAT+AGG + tig0000808:29679-29698 Msa1336230:intergenic 40.0%
GAGTGTATTACATAGGGTTC+TGG - tig0000808:30220-30239 Msa1336230:intron 40.0%
! AGAGAATCCAAAGCGTTACA+TGG - tig0000808:30334-30353 Msa1336230:intron 40.0%
!! TTTGTGGGTCTTTCTGAAGC+TGG + tig0000808:27191-27210 Msa1336230:intergenic 45.0%
TCAATACACCTCTTCACGCT+CGG - tig0000808:28060-28079 Msa1336230:intron 45.0%
CAATAATACCGAGCGTGAAG+AGG + tig0000808:28071-28090 Msa1336230:intergenic 45.0%
GCTGAATCGATAGACTCTGA+TGG - tig0000808:28121-28140 Msa1336230:intron 45.0%
! TACTTAGCTCTCTCCTCCAA+TGG + tig0000808:28401-28420 Msa1336230:intergenic 45.0%
ATGAGAGCAGCTGTGAGATA+TGG - tig0000808:28434-28453 Msa1336230:intron 45.0%
TGAGAGCAGCTGTGAGATAT+GGG - tig0000808:28435-28454 Msa1336230:intron 45.0%
AAGACTCAGTGTTCTGTTGG+AGG - tig0000808:28477-28496 Msa1336230:intron 45.0%
AGACTCAGTGTTCTGTTGGA+GGG - tig0000808:28478-28497 Msa1336230:intron 45.0%
TTACTGAAAGTCCAATGGGG+AGG + tig0000808:28546-28565 Msa1336230:intergenic 45.0%
TTCATCAATGGGTCCCATTG+GGG - tig0000808:28650-28669 Msa1336230:CDS 45.0%
!!! CGCCGCCATAGTCTTTTTTT+AGG - tig0000808:29114-29133 Msa1336230:intron 45.0%
TATGGAAGCCAACCAAGAAG+AGG - tig0000808:29438-29457 Msa1336230:intron 45.0%
TTTCTTTGGCCTCCTCTTCT+TGG + tig0000808:29453-29472 Msa1336230:intergenic 45.0%
!! AGGGCATGGTGGGTAAAAAT+TGG + tig0000808:29536-29555 Msa1336230:intergenic 45.0%
ATGCACCCTCACTCTGATTA+TGG - tig0000808:29577-29596 Msa1336230:intron 45.0%
GGAAGCCATAATCAGAGTGA+GGG + tig0000808:29585-29604 Msa1336230:intergenic 45.0%
AGGAAGCCATAATCAGAGTG+AGG + tig0000808:29586-29605 Msa1336230:intergenic 45.0%
TCTCCTCCAAGATGAAGTAG+AGG - tig0000808:29612-29631 Msa1336230:intron 45.0%
CTCCTCCAAGATGAAGTAGA+GGG - tig0000808:29613-29632 Msa1336230:intron 45.0%
AACCCTCTACTTCATCTTGG+AGG + tig0000808:29618-29637 Msa1336230:intergenic 45.0%
GCAAACCCTCTACTTCATCT+TGG + tig0000808:29621-29640 Msa1336230:intergenic 45.0%
! AGCTAAGAGCAGAGTATCAG+TGG - tig0000808:30250-30269 Msa1336230:intron 45.0%
TCACAGTGCAGTCAAAAGGA+AGG + tig0000808:30289-30308 Msa1336230:intergenic 45.0%
TCTGTGTCCATGTAACGCTT+TGG + tig0000808:30344-30363 Msa1336230:intergenic 45.0%
TTTGGCCTCCTCTTCTTGGT+TGG + tig0000808:29449-29468 Msa1336230:intergenic 50.0%
! CAAGGGTTAGGTCTGGTTCA+GGG + tig0000808:29555-29574 Msa1336230:intergenic 50.0%
TGCATTCCAAGGGTTAGGTC+TGG + tig0000808:29562-29581 Msa1336230:intergenic 50.0%
! AGAGTGAGGGTGCATTCCAA+GGG + tig0000808:29572-29591 Msa1336230:intergenic 50.0%
! CATCTTGGAGGAGAAGTGTG+AGG + tig0000808:29606-29625 Msa1336230:intergenic 50.0%
GGTCTCACAGTGCAGTCAAA+AGG + tig0000808:30293-30312 Msa1336230:intergenic 50.0%
TGAAAGTCCAATGGGGAGGC+AGG + tig0000808:28542-28561 Msa1336230:intergenic 55.0%
GGAAGCCAACCAAGAAGAGG+AGG - tig0000808:29441-29460 Msa1336230:intron 55.0%
GGACAATGGGAGCCAGATGT+TGG - tig0000808:29507-29526 Msa1336230:intron 55.0%
! GTTAGGTCTGGTTCAGGGCA+TGG + tig0000808:29550-29569 Msa1336230:intergenic 55.0%
! CCAAGGGTTAGGTCTGGTTC+AGG + tig0000808:29556-29575 Msa1336230:intergenic 55.0%
CCTGAACCAGACCTAACCCT+TGG - tig0000808:29553-29572 Msa1336230:intron 55.0%
! GAGGGTGCATTCCAAGGGTT+AGG + tig0000808:29567-29586 Msa1336230:intergenic 55.0%
! CAGAGTGAGGGTGCATTCCA+AGG + tig0000808:29573-29592 Msa1336230:intergenic 55.0%
GAGGCAGGCCAATCAGGCAA+AGG + tig0000808:28527-28546 Msa1336230:intergenic 60.0%
AATGGGGAGGCAGGCCAATC+AGG + tig0000808:28533-28552 Msa1336230:intergenic 60.0%
!! TGATTGGCCTGCCTCCCCAT+TGG - tig0000808:28532-28551 Msa1336230:intron 60.0%
! GGTCTGGTTCAGGGCATGGT+GGG + tig0000808:29546-29565 Msa1336230:intergenic 60.0%
! AGGTCTGGTTCAGGGCATGG+TGG + tig0000808:29547-29566 Msa1336230:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0000808 gene 26634 30515 26634 ID=Msa1336230;Name=Msa1336230
tig0000808 mRNA 26634 30515 26634 ID=Msa1336230-mRNA-1;Parent=Msa1336230;Name=Msa1336230-mRNA-1;_AED=0.06;_eAED=0.06;_QI=78|1|1|1|0.75|0.6|5|67|381
tig0000808 exon 26634 26952 26634 ID=Msa1336230-mRNA-1:exon:646;Parent=Msa1336230-mRNA-1
tig0000808 exon 27429 27792 27429 ID=Msa1336230-mRNA-1:exon:645;Parent=Msa1336230-mRNA-1
tig0000808 exon 28588 28823 28588 ID=Msa1336230-mRNA-1:exon:644;Parent=Msa1336230-mRNA-1
tig0000808 exon 29800 30100 29800 ID=Msa1336230-mRNA-1:exon:643;Parent=Msa1336230-mRNA-1
tig0000808 exon 30445 30515 30445 ID=Msa1336230-mRNA-1:exon:642;Parent=Msa1336230-mRNA-1
tig0000808 five_prime_UTR 30445 30515 30445 ID=Msa1336230-mRNA-1:five_prime_utr;Parent=Msa1336230-mRNA-1
tig0000808 five_prime_UTR 30094 30100 30094 ID=Msa1336230-mRNA-1:five_prime_utr;Parent=Msa1336230-mRNA-1
tig0000808 CDS 29800 30093 29800 ID=Msa1336230-mRNA-1:cds;Parent=Msa1336230-mRNA-1
tig0000808 CDS 28588 28823 28588 ID=Msa1336230-mRNA-1:cds;Parent=Msa1336230-mRNA-1
tig0000808 CDS 27429 27792 27429 ID=Msa1336230-mRNA-1:cds;Parent=Msa1336230-mRNA-1
tig0000808 CDS 26701 26952 26701 ID=Msa1336230-mRNA-1:cds;Parent=Msa1336230-mRNA-1
tig0000808 three_prime_UTR 26634 26700 26634 ID=Msa1336230-mRNA-1:three_prime_utr;Parent=Msa1336230-mRNA-1
Gene Sequence

>Msa1336230

ATGTCTCCTGCAATGGCAATGAATGATGAAAGGAGTGAGGATTGTCATACAATAGAAAGTGAATATCATAAAGGAGTGAAGCATTTGTATGAGAAAGGTTATCTTCATAAGGTACCAAAGAAGTATATGTTTCCAGCTTCAGAAAGACCCACAAAGAGTATAGATGATGATTCAAATGTTGCTAAGGAAAATCTTCAGCTACCCATAATTGATTTCACTGATCTTATTGGTCCAAATAGGCTACAAGCTCTTGAGTCTCTAGCCAATGCTTGTGAACAATATGGATTTTTCCAGCTAGTAAATCACAACATATCAGATGATATAACAAGGAGCATCATAGATGTTGTAGGAAGATTCTTCGATCTTCCATTGGAGGAGAGAGCTAAGTATATGACAAGTGATATGAGAGCAGCTGTGAGATATGGGACCAGTTTCAGTCAAACAAAAGACTCAGTGTTCTGTTGGAGGGATTTCTTGAAACTCATTTGTAATCCTTTGCCTGATTGGCCTGCCTCCCCATTGGACTTTCAGGAAGTGGTGGCCAGCTATGCAGAAGAAACCAAACATTTGTTCTTGACAATAATGGAAGCCATCCTAGAAAGTTTAGGGATTATGGAAGCCAACCAAGAAGAGGAGGCCAAAGAAAATGACAACAACAATAATAATATTATGAAAGAATTGGACAATGGGAGCCAGATGTTGGTAACCAATTTTTACCCACCATGCCCTGAACCAGACCTAACCCTTGGAATGCACCCTCACTCTGATTATGGCTTCCTCACACTTCTCCTCCAAGATGAAGTAGAGGGTTTGCAAATCCAATATCAAGACAAATGGCTTACTGTTCAACCTATTCCCAATGCTTTCGTTGTCAATATTGGTGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTATTACATAGGGTTCTGGTGAATGAAGCTAAGAGCAGAGTATCAGTGGCTTCTCTGCATAGCCTTCCTTTTGACTGCACTGTGAGACCGTCACCAAAACTCATTGATGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGCTAGCTTTCTTGCGTATGTGTCCACAAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCCAGAAAATTAACATACACATAA
Protein sequence

>Msa1336230

MSPAMAMNDERSEDCHTIESEYHKGVKHLYEKGYLHKVPKKYMFPASERPTKSIDDDSNVAKENLQLPIIDFTDLIGPNRLQALESLANACEQYGFFQLVNHNISDDITRSIIDVVGRFFDLPLEERAKYMTSDMRAAVRYGTSFSQTKDSVFCWRDFLKLICNPLPDWPASPLDFQEVVASYAEETKHLFLTIMEAILESLGIMEANQEEEAKENDNNNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQYQDKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVLVNEAKSRVSVASLHSLPFDCTVRPSPKLIDEENPKRYMDTDFASFLAYVSTRETKKKDFLESRKLTYT*