AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1079870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079870 MtrunA17_Chr7g0265221 94.574 387 10 4 1 380 1 383 0.0 748
Msa1079870 MtrunA17_Chr1g0179801 69.452 383 103 4 1 378 1 374 0.0 561
Msa1079870 MtrunA17_Chr7g0250511 39.306 346 185 7 38 377 25 351 2.25e-86 265
Msa1079870 MtrunA17_Chr5g0426891 37.784 352 198 5 26 373 4 338 1.05e-84 261
Msa1079870 MtrunA17_Chr8g0345831 37.176 347 196 4 35 377 15 343 8.68e-78 243
Msa1079870 MtrunA17_Chr3g0128001 38.889 342 182 6 37 373 14 333 4.48e-74 233
Msa1079870 MtrunA17_Chr4g0050031 35.457 361 207 7 26 377 23 366 5.37e-73 231
Msa1079870 MtrunA17_Chr7g0242551 35.196 358 210 7 26 374 15 359 9.27e-69 221
Msa1079870 MtrunA17_Chr3g0126741 37.542 301 171 5 51 346 43 331 1.24e-67 218
Msa1079870 MtrunA17_Chr4g0006371 34.417 369 207 8 26 374 14 367 1.65e-67 218
Msa1079870 MtrunA17_Chr7g0239111 35.143 350 195 10 37 377 30 356 2.43e-63 206
Msa1079870 MtrunA17_Chr5g0421091 33.799 358 210 9 26 377 11 347 3.55e-63 206
Msa1079870 MtrunA17_Chr8g0375671 33.616 354 202 9 35 377 26 357 7.16e-63 205
Msa1079870 MtrunA17_Chr5g0420901 34.270 356 201 10 31 377 16 347 2.05e-62 204
Msa1079870 MtrunA17_Chr8g0365241 32.092 349 211 7 35 377 31 359 2.95e-61 201
Msa1079870 MtrunA17_Chr5g0420981 32.113 355 210 7 32 377 23 355 7.72e-61 200
Msa1079870 MtrunA17_Chr2g0314381 33.516 364 209 8 26 379 42 382 9.58e-61 200
Msa1079870 MtrunA17_Chr2g0311831 34.677 372 202 11 20 377 27 371 1.04e-60 200
Msa1079870 MtrunA17_Chr1g0184151 34.242 330 189 7 35 356 12 321 1.73e-60 198
Msa1079870 MtrunA17_Chr5g0423221 33.524 349 202 9 37 377 47 373 2.39e-60 199
Msa1079870 MtrunA17_Chr3g0113641 35.014 357 200 9 32 376 20 356 3.38e-60 198
Msa1079870 MtrunA17_Chr5g0423201 33.229 319 192 4 65 377 46 349 4.05e-60 198
Msa1079870 MtrunA17_Chr5g0398291 35.072 345 201 8 38 370 19 352 8.33e-60 197
Msa1079870 MtrunA17_Chr8g0336851 32.865 356 202 11 20 364 22 351 9.45e-60 197
Msa1079870 MtrunA17_Chr8g0354261 34.571 350 199 8 20 359 27 356 1.50e-59 197
Msa1079870 MtrunA17_Chr5g0421011 31.285 358 215 8 28 377 14 348 1.54e-59 196
Msa1079870 MtrunA17_Chr8g0375601 31.356 354 218 6 32 377 16 352 2.58e-59 196
Msa1079870 MtrunA17_Chr7g0239101 33.429 350 201 10 37 377 30 356 7.81e-59 194
Msa1079870 MtrunA17_Chr1g0187821 34.473 351 206 7 21 364 24 357 9.82e-59 195
Msa1079870 MtrunA17_Chr5g0420941 30.726 358 220 8 26 377 11 346 2.08e-58 193
Msa1079870 MtrunA17_Chr8g0375571 33.056 360 204 9 32 378 16 351 4.70e-58 192
Msa1079870 MtrunA17_Chr5g0420951 31.073 354 209 8 35 377 26 355 7.04e-58 192
Msa1079870 MtrunA17_Chr2g0311761 34.400 375 200 12 20 377 27 372 1.83e-57 191
Msa1079870 MtrunA17_Chr8g0336761 32.500 360 198 12 20 364 22 351 2.23e-57 191
Msa1079870 MtrunA17_Chr7g0239121 35.277 343 189 11 37 369 26 345 2.85e-57 191
Msa1079870 MtrunA17_Chr1g0184161 32.743 339 198 6 35 363 12 330 3.94e-57 190
Msa1079870 MtrunA17_Chr5g0437181 32.759 348 208 7 38 376 25 355 4.70e-57 190
Msa1079870 MtrunA17_Chr8g0354241 32.194 351 208 8 20 360 27 357 4.88e-57 191
Msa1079870 MtrunA17_Chr5g0412651 32.915 319 180 6 66 369 38 337 5.11e-57 189
Msa1079870 MtrunA17_Chr5g0424201 35.185 324 183 7 43 358 23 327 5.19e-57 189
Msa1079870 MtrunA17_Chr3g0109041 32.123 358 205 9 26 370 10 342 6.15e-57 189
Msa1079870 MtrunA17_Chr2g0314391 32.827 329 199 6 58 379 62 375 7.58e-57 190
Msa1079870 MtrunA17_Chr8g0348081 33.056 360 196 10 20 364 22 351 9.65e-57 189
Msa1079870 MtrunA17_Chr5g0423191 30.484 351 209 9 37 377 23 348 1.88e-56 188
Msa1079870 MtrunA17_Chr1g0184121 32.249 338 205 5 27 359 3 321 1.95e-56 188
Msa1079870 MtrunA17_Chr5g0423251 29.060 351 214 9 37 377 23 348 2.07e-56 188
Msa1079870 MtrunA17_Chr1g0187831 33.140 344 207 7 25 360 29 357 2.32e-56 189
Msa1079870 MtrunA17_Chr8g0336861 32.386 352 202 10 20 360 22 348 5.16e-56 187
Msa1079870 MtrunA17_Chr7g0239821 34.268 321 185 9 65 377 63 365 6.09e-56 187
Msa1079870 MtrunA17_Chr5g0423211 31.564 358 210 12 31 377 17 350 7.94e-56 187
Msa1079870 MtrunA17_Chr3g0125201 33.446 296 182 5 64 358 1 282 9.28e-56 185
Msa1079870 MtrunA17_Chr2g0311681 34.375 352 201 7 20 360 21 353 1.11e-55 187
Msa1079870 MtrunA17_Chr2g0311711 34.758 351 198 8 20 360 25 354 1.19e-55 187
Msa1079870 MtrunA17_Chr2g0314401 32.110 327 200 6 58 377 43 354 1.71e-55 186
Msa1079870 MtrunA17_Chr2g0311701 34.181 354 199 8 20 360 27 359 7.43e-55 185
Msa1079870 MtrunA17_Chr2g0296371 31.714 350 208 7 38 377 28 356 7.55e-55 184
Msa1079870 MtrunA17_Chr8g0336781 32.773 357 194 12 20 360 57 383 8.30e-55 185
Msa1079870 MtrunA17_Chr1g0162191 32.861 353 195 9 35 372 20 345 8.31e-55 184
Msa1079870 MtrunA17_Chr1g0184111 31.953 338 206 5 27 359 3 321 1.37e-54 183
Msa1079870 MtrunA17_Chr1g0187811 31.389 360 214 8 20 364 139 480 1.77e-54 187
Msa1079870 MtrunA17_Chr1g0184101 31.307 329 202 5 35 358 11 320 1.79e-54 183
Msa1079870 MtrunA17_Chr4g0066121 33.648 318 182 8 55 360 48 348 2.76e-54 183
Msa1079870 MtrunA17_Chr2g0311921 32.857 350 203 10 25 364 18 345 3.27e-54 182
Msa1079870 MtrunA17_Chr8g0375701 33.811 349 198 11 38 377 31 355 8.74e-54 181
Msa1079870 MtrunA17_Chr5g0412681 33.119 311 180 5 66 368 33 323 1.15e-53 181
Msa1079870 MtrunA17_Chr2g0311691 32.955 352 206 7 20 360 21 353 1.49e-53 181
Msa1079870 MtrunA17_Chr5g0421101 31.304 345 204 9 38 373 24 344 2.26e-53 180
Msa1079870 MtrunA17_Chr5g0412671 32.812 320 187 7 66 371 38 343 2.52e-53 180
Msa1079870 MtrunA17_Chr2g0311741 36.306 314 169 8 53 357 17 308 3.21e-53 179
Msa1079870 MtrunA17_Chr5g0424211 34.295 312 180 7 43 346 21 315 6.09e-53 179
Msa1079870 MtrunA17_Chr8g0336631 32.410 361 198 13 20 364 22 352 1.01e-52 179
Msa1079870 MtrunA17_Chr2g0311861 33.243 370 190 11 20 377 23 347 1.48e-52 178
Msa1079870 MtrunA17_Chr2g0311631 31.755 359 205 11 25 368 21 354 1.78e-52 178
Msa1079870 MtrunA17_Chr5g0421041 29.683 347 207 8 37 373 23 342 2.56e-52 177
Msa1079870 MtrunA17_Chr6g0455481 32.558 344 202 5 38 374 19 339 2.88e-52 177
Msa1079870 MtrunA17_Chr7g0247991 34.986 363 205 10 25 377 32 373 2.91e-52 178
Msa1079870 MtrunA17_Chr8g0375681 32.517 286 172 4 98 377 15 285 4.99e-52 175
Msa1079870 MtrunA17_Chr7g0232161 33.439 314 175 11 37 341 35 323 1.28e-51 175
Msa1079870 MtrunA17_Chr1g0184241 32.565 347 212 7 20 364 28 354 3.18e-51 175
Msa1079870 MtrunA17_Chr7g0235951 30.854 363 220 9 25 377 32 373 9.60e-51 174
Msa1079870 MtrunA17_Chr6g0472861 33.143 350 208 10 21 360 23 356 1.21e-50 174
Msa1079870 MtrunA17_Chr8g0371931 33.922 283 159 6 65 336 38 303 1.37e-50 173
Msa1079870 MtrunA17_Chr4g0055591 30.904 343 206 9 25 359 24 343 2.63e-50 172
Msa1079870 MtrunA17_Chr7g0225881 31.988 347 213 8 20 359 22 352 2.90e-50 172
Msa1079870 MtrunA17_Chr8g0364471 31.609 348 203 11 25 360 32 356 3.59e-50 172
Msa1079870 MtrunA17_Chr3g0102041 34.859 284 155 7 65 336 38 303 5.93e-50 171
Msa1079870 MtrunA17_Chr3g0114861 31.325 332 195 8 35 357 14 321 1.78e-49 169
Msa1079870 MtrunA17_Chr8g0370711 33.226 310 184 7 60 360 46 341 2.63e-49 169
Msa1079870 MtrunA17_Chr8g0371921 34.314 306 168 8 42 336 20 303 3.08e-49 170
Msa1079870 MtrunA17_Chr3g0145171 31.833 311 185 6 60 357 46 342 3.72e-49 169
Msa1079870 MtrunA17_Chr8g0336751 33.871 310 179 8 64 364 92 384 7.82e-49 169
Msa1079870 MtrunA17_Chr7g0266651 29.508 366 229 10 20 377 18 362 9.38e-49 168
Msa1079870 MtrunA17_Chr7g0220011 32.081 346 205 7 34 372 11 333 1.25e-48 167
Msa1079870 MtrunA17_Chr1g0167911 31.445 353 208 11 20 362 14 342 1.71e-48 167
Msa1079870 MtrunA17_Chr8g0370721 35.117 299 169 7 60 349 46 328 1.73e-48 167
Msa1079870 MtrunA17_Chr3g0093761 31.507 365 210 10 25 377 17 353 2.27e-48 167
Msa1079870 MtrunA17_Chr7g0239071 34.000 300 173 7 86 377 19 301 8.89e-48 164
Msa1079870 MtrunA17_Chr8g0335411 32.507 363 214 8 25 377 32 373 8.91e-48 166
Msa1079870 MtrunA17_Chr5g0405411 32.862 283 162 6 65 336 38 303 1.18e-47 165
Msa1079870 MtrunA17_Chr3g0093751 30.959 365 213 9 25 377 17 354 1.34e-47 165
Msa1079870 MtrunA17_Chr1g0204181 31.686 344 188 7 38 361 38 354 1.63e-47 166
Msa1079870 MtrunA17_Chr4g0064781 32.344 337 193 8 46 367 24 340 2.66e-47 164
Msa1079870 MtrunA17_Chr3g0093741 30.387 362 219 9 25 377 17 354 3.67e-47 164
Msa1079870 MtrunA17_Chr7g0220001 30.275 327 199 6 38 358 18 321 9.49e-47 162
Msa1079870 MtrunA17_Chr3g0087031 30.372 349 215 8 36 377 33 360 1.37e-46 162
Msa1079870 MtrunA17_Chr4g0045471 30.816 331 187 9 66 370 26 340 1.75e-46 162
Msa1079870 MtrunA17_Chr6g0474391 31.287 342 192 7 38 361 43 359 2.29e-46 162
Msa1079870 MtrunA17_Chr7g0236011 32.787 366 209 10 25 377 32 373 2.62e-46 162
Msa1079870 MtrunA17_Chr1g0162361 30.159 315 180 5 65 359 26 320 6.51e-46 160
Msa1079870 MtrunA17_Chr1g0170631 39.512 205 106 5 176 377 3 192 7.00e-46 156
Msa1079870 MtrunA17_Chr3g0130391 30.792 341 195 7 38 361 45 361 2.49e-45 160
Msa1079870 MtrunA17_Chr2g0332191 31.487 343 203 8 35 371 25 341 8.01e-45 158
Msa1079870 MtrunA17_Chr7g0239091 32.087 321 182 11 65 377 159 451 9.57e-45 160
Msa1079870 MtrunA17_Chr1g0162351 29.060 351 198 8 37 359 46 373 1.75e-44 158
Msa1079870 MtrunA17_Chr4g0045411 31.488 289 167 6 83 357 54 325 2.02e-44 157
Msa1079870 MtrunA17_Chr4g0045431 31.429 315 165 7 83 370 49 339 4.99e-44 155
Msa1079870 MtrunA17_Chr1g0161041 30.833 360 217 11 20 371 54 389 5.38e-44 157
Msa1079870 MtrunA17_Chr1g0167951 30.199 351 217 8 20 364 14 342 5.95e-44 155
Msa1079870 MtrunA17_Chr1g0167961 31.755 359 203 13 20 364 29 359 6.97e-44 155
Msa1079870 MtrunA17_Chr1g0161081 29.917 361 227 10 20 378 31 367 3.41e-43 154
Msa1079870 MtrunA17_Chr1g0161111 29.379 354 226 8 20 369 90 423 3.77e-43 155
Msa1079870 MtrunA17_Chr1g0162321 28.767 365 204 10 37 373 46 382 3.96e-43 154
Msa1079870 MtrunA17_Chr4g0045451 28.097 331 195 8 66 370 26 339 5.69e-42 150
Msa1079870 MtrunA17_Chr2g0289341 30.556 288 169 7 66 344 4 269 1.08e-41 149
Msa1079870 MtrunA17_Chr4g0045441 29.697 330 189 9 66 369 26 338 3.11e-41 148
Msa1079870 MtrunA17_Chr3g0126761 39.766 171 91 1 176 346 44 202 1.02e-40 144
Msa1079870 MtrunA17_Chr3g0114871 31.915 282 162 8 38 313 18 275 2.43e-40 144
Msa1079870 MtrunA17_Chr8g0351101 30.769 338 198 8 38 361 33 348 2.46e-40 146
Msa1079870 MtrunA17_Chr3g0121141 31.142 289 168 6 66 345 4 270 2.60e-40 145
Msa1079870 MtrunA17_Chr3g0145181 30.503 318 188 9 60 362 43 342 2.69e-40 145
Msa1079870 MtrunA17_Chr4g0066991 31.129 363 199 11 25 377 32 353 3.05e-40 145
Msa1079870 MtrunA17_Chr4g0011311 30.216 278 169 8 25 298 32 288 8.02e-40 143
Msa1079870 MtrunA17_Chr1g0191201 29.096 354 206 10 28 361 20 348 1.76e-39 144
Msa1079870 MtrunA17_Chr7g0265351 29.245 318 200 5 66 377 39 337 1.78e-39 143
Msa1079870 MtrunA17_Chr1g0148771 33.333 276 159 7 66 336 63 318 1.31e-38 141
Msa1079870 MtrunA17_Chr3g0145201 31.353 303 176 8 61 349 679 963 1.56e-38 147
Msa1079870 MtrunA17_Chr3g0125421 30.473 338 199 10 38 361 16 331 2.80e-38 140
Msa1079870 MtrunA17_Chr4g0053251 31.544 298 163 10 65 336 7 289 4.20e-38 139
Msa1079870 MtrunA17_Chr1g0167931 29.971 347 168 11 20 355 14 296 5.40e-38 139
Msa1079870 MtrunA17_Chr5g0420721 30.451 266 156 7 122 377 4 250 7.98e-38 137
Msa1079870 MtrunA17_Chr5g0439011 29.110 292 182 5 64 349 3 275 1.58e-37 137
Msa1079870 MtrunA17_Chr8g0336801 45.385 130 68 1 234 360 10 139 9.92e-37 130
Msa1079870 MtrunA17_Chr8g0384481 29.513 349 202 11 38 370 38 358 3.49e-36 135
Msa1079870 MtrunA17_Chr7g0235981 32.222 270 161 4 98 360 56 310 7.91e-36 133
Msa1079870 MtrunA17_Chr8g0362741 30.909 275 156 7 25 298 32 273 8.10e-36 132
Msa1079870 MtrunA17_Chr6g0488511 29.524 315 202 8 64 376 1 297 9.56e-36 132
Msa1079870 MtrunA17_Chr5g0420881 40.559 143 84 1 236 377 2 144 2.39e-35 127
Msa1079870 MtrunA17_Chr4g0045461 27.778 342 209 8 49 370 15 338 6.35e-35 132
Msa1079870 MtrunA17_Chr1g0158011 29.603 277 175 6 105 378 3 262 1.43e-34 128
Msa1079870 MtrunA17_Chr8g0384461 27.701 361 221 9 19 364 8 343 7.65e-34 129
Msa1079870 MtrunA17_Chr2g0314371 28.707 317 193 10 25 321 16 319 5.89e-33 125
Msa1079870 MtrunA17_Chr4g0004071 29.063 320 193 9 65 371 8 306 7.95e-32 122
Msa1079870 MtrunA17_Chr3g0092531 31.522 276 156 7 82 347 26 278 8.11e-32 122
Msa1079870 MtrunA17_Chr4g0068891 28.916 332 188 11 43 357 1 301 2.67e-31 121
Msa1079870 MtrunA17_Chr4g0055911 30.699 329 185 11 63 367 6 315 1.47e-30 119
Msa1079870 MtrunA17_Chr8g0336871 38.621 145 79 3 219 359 18 156 2.63e-30 114
Msa1079870 MtrunA17_Chr4g0075471 39.259 135 72 2 210 343 13 138 6.51e-29 110
Msa1079870 MtrunA17_Chr2g0319491 27.437 277 180 7 62 334 29 288 7.23e-29 114
Msa1079870 MtrunA17_Chr4g0004061 28.349 321 195 10 65 371 8 307 4.26e-28 112
Msa1079870 MtrunA17_Chr2g0285931 27.148 291 176 8 66 341 28 297 1.01e-27 111
Msa1079870 MtrunA17_Chr1g0194321 28.481 316 184 9 64 357 18 313 1.13e-27 111
Msa1079870 MtrunA17_Chr1g0158021 28.992 238 146 6 58 290 41 260 2.15e-27 108
Msa1079870 MtrunA17_Chr4g0064771 42.657 143 78 2 229 367 63 205 1.81e-26 105
Msa1079870 MtrunA17_Chr4g0009561 27.077 325 198 11 65 369 6 311 3.55e-26 107
Msa1079870 MtrunA17_Chr4g0055871 29.568 301 178 10 63 349 6 286 7.33e-26 105
Msa1079870 MtrunA17_Chr2g0313111 25.902 305 197 8 45 341 7 290 7.79e-26 106
Msa1079870 MtrunA17_Chr8g0358941 26.936 297 172 10 65 341 26 297 1.22e-25 105
Msa1079870 MtrunA17_Chr1g0170641 30.857 175 99 4 8 176 3 161 3.90e-24 97.4
Msa1079870 MtrunA17_Chr2g0293931 38.922 167 83 6 179 337 10 165 5.43e-24 98.6
Msa1079870 MtrunA17_Chr5g0394071 37.671 146 77 2 178 323 4 135 1.82e-23 96.3
Msa1079870 MtrunA17_Chr7g0233661 49.451 91 46 0 233 323 19 109 2.45e-23 95.1
Msa1079870 MtrunA17_Chr8g0389941 29.085 306 178 11 68 349 33 323 3.56e-23 99.4
Msa1079870 MtrunA17_Chr4g0037611 42.453 106 60 1 219 323 20 125 4.11e-22 92.4
Msa1079870 MtrunA17_Chr3g0138351 23.692 325 207 6 64 368 5 308 8.05e-22 94.7
Msa1079870 MtrunA17_Chr4g0052251 24.915 293 191 7 86 360 43 324 1.23e-21 94.7
Msa1079870 MtrunA17_Chr8g0348951 26.647 334 197 11 64 380 8 310 1.90e-21 94.0
Msa1079870 MtrunA17_Chr3g0105281 29.044 272 154 9 69 323 28 277 2.14e-21 94.0
Msa1079870 MtrunA17_Chr8g0375581 44.872 78 42 1 218 294 8 85 8.57e-20 83.2
Msa1079870 MtrunA17_Chr5g0407781 26.599 297 173 9 66 349 5 269 1.20e-19 88.2
Msa1079870 MtrunA17_Chr4g0009541 24.841 314 197 10 65 360 6 298 1.92e-19 88.2
Msa1079870 MtrunA17_Chr8g0336831 26.749 243 147 9 20 255 22 240 9.55e-19 85.1
Msa1079870 MtrunA17_Chr5g0407731 23.333 300 199 7 66 359 33 307 1.27e-18 85.9
Msa1079870 MtrunA17_Chr6g0486831 44.860 107 53 2 248 349 207 312 1.97e-18 85.5
Msa1079870 MtrunA17_Chr2g0311611 47.143 70 30 1 236 298 2 71 2.44e-18 78.6
Msa1079870 MtrunA17_Chr8g0364171 33.333 123 68 2 176 298 18 126 2.68e-18 80.9
Msa1079870 MtrunA17_Chr1g0158031 30.380 158 100 4 226 378 29 181 2.06e-17 79.3
Msa1079870 MtrunA17_Chr7g0219991 39.831 118 55 3 177 293 249 351 3.02e-17 82.4
Msa1079870 MtrunA17_Chr1g0161101 42.105 95 45 2 230 323 401 486 3.04e-17 83.2
Msa1079870 MtrunA17_Chr3g0092581 35.878 131 79 3 221 347 21 150 4.07e-17 79.0
Msa1079870 MtrunA17_Chr7g0256741 25.155 322 196 11 66 368 10 305 5.61e-17 80.9
Msa1079870 MtrunA17_Chr7g0247741 25.595 336 203 11 60 378 5 310 5.73e-17 80.9
Msa1079870 MtrunA17_Chr8g0364161 31.250 144 91 5 25 166 32 169 1.30e-15 74.7
Msa1079870 MtrunA17_Chr2g0311641 30.435 138 88 3 25 161 21 151 2.38e-15 73.2
Msa1079870 MtrunA17_Chr8g0375661 30.597 134 82 4 35 164 26 152 2.70e-15 73.2
Msa1079870 MtrunA17_Chr8g0375641 30.827 133 83 4 35 164 26 152 5.08e-15 72.8
Msa1079870 MtrunA17_Chr2g0319521 46.377 69 37 0 230 298 56 124 1.18e-14 70.5
Msa1079870 MtrunA17_Chr1g0167921 46.032 63 34 0 235 297 94 156 1.84e-14 70.9
Msa1079870 MtrunA17_Chr5g0420891 32.847 137 81 5 31 165 16 143 2.93e-14 70.1
Msa1079870 MtrunA17_Chr7g0235991 26.452 155 111 3 54 205 9 163 5.63e-13 67.0
Msa1079870 MtrunA17_Chr4g0055921 41.270 63 34 1 64 126 7 66 2.30e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079870 AT2G36690.2 58.377 382 135 5 1 377 1 363 3.85e-162 459
Msa1079870 AT2G36690.1 58.377 382 135 5 1 377 1 363 3.85e-162 459
Msa1079870 AT3G60290.1 39.344 366 197 7 17 376 7 353 5.45e-87 268
Msa1079870 AT2G44800.1 39.017 346 187 6 37 376 26 353 1.64e-82 256
Msa1079870 AT4G10500.1 41.667 312 160 4 38 345 20 313 2.35e-82 255
Msa1079870 AT4G10490.1 38.838 327 176 5 38 358 18 326 3.39e-81 252
Msa1079870 AT5G07480.1 35.171 381 206 9 10 377 2 354 1.89e-72 230
Msa1079870 AT2G38240.1 35.440 364 201 10 26 378 12 352 2.89e-68 219
Msa1079870 AT5G24530.1 35.674 356 196 7 29 374 5 337 1.38e-66 214
Msa1079870 AT3G11180.1 33.815 346 209 7 35 374 64 395 5.40e-62 204
Msa1079870 AT5G05600.1 34.957 349 201 7 35 374 35 366 8.64e-61 200
Msa1079870 AT3G11180.2 33.524 349 208 8 35 373 64 398 2.08e-60 200
Msa1079870 AT1G17010.1 32.222 360 218 8 26 377 17 358 8.72e-58 192
Msa1079870 AT3G21420.1 33.903 351 198 10 36 371 26 357 1.62e-55 186
Msa1079870 AT1G06620.1 32.961 358 201 9 20 364 21 352 2.54e-55 186
Msa1079870 AT2G30840.1 32.961 358 204 10 20 364 15 349 4.35e-55 185
Msa1079870 AT3G55970.1 32.670 352 214 10 35 376 22 360 1.72e-54 184
Msa1079870 AT1G17020.1 31.198 359 223 9 26 377 17 358 3.65e-54 183
Msa1079870 AT5G59530.1 33.046 348 194 10 24 357 22 344 4.65e-53 180
Msa1079870 AT4G25310.1 34.097 349 197 10 38 377 29 353 9.16e-53 179
Msa1079870 AT4G25300.1 34.062 320 190 7 65 377 51 356 9.47e-53 179
Msa1079870 AT5G07480.2 36.680 259 139 5 130 377 1 245 1.48e-52 175
Msa1079870 AT5G43450.1 33.238 349 200 9 25 361 23 350 2.98e-52 178
Msa1079870 AT1G04350.1 33.815 346 200 11 20 357 16 340 6.53e-52 177
Msa1079870 AT3G13610.1 30.000 360 221 8 25 377 26 361 7.36e-52 177
Msa1079870 AT2G30840.3 32.961 358 198 11 20 364 15 343 2.29e-51 175
Msa1079870 AT4G25420.1 33.728 338 188 9 38 361 40 355 3.16e-51 176
Msa1079870 AT4G22880.1 30.484 351 211 9 26 360 7 340 4.28e-51 175
Msa1079870 AT4G22880.2 30.484 351 211 9 26 360 7 340 4.28e-51 175
Msa1079870 AT4G22880.3 30.484 351 211 9 26 360 7 340 4.28e-51 175
Msa1079870 AT5G43440.1 31.232 349 211 9 25 363 23 352 4.90e-51 175
Msa1079870 AT3G19010.1 31.454 337 185 7 50 362 12 326 9.21e-51 174
Msa1079870 AT3G19010.4 31.454 337 185 7 50 362 12 326 9.21e-51 174
Msa1079870 AT1G55290.1 31.884 345 201 9 25 360 25 344 1.50e-50 173
Msa1079870 AT1G78550.1 33.861 316 181 10 38 345 29 324 3.58e-50 172
Msa1079870 AT4G16330.2 30.887 327 194 7 57 374 58 361 5.66e-50 172
Msa1079870 AT5G59540.1 33.714 350 186 12 20 351 19 340 1.32e-49 171
Msa1079870 AT3G12900.1 31.672 341 202 10 25 358 21 337 1.42e-49 171
Msa1079870 AT1G04380.1 32.051 312 190 6 45 351 25 319 2.76e-49 169
Msa1079870 AT2G30830.1 31.361 338 198 9 25 352 20 333 5.04e-49 169
Msa1079870 AT3G61400.1 30.685 365 222 10 21 372 20 366 6.63e-49 169
Msa1079870 AT1G06645.1 31.025 361 206 11 20 364 33 366 1.26e-48 169
Msa1079870 AT1G77330.1 31.333 300 187 5 64 358 1 286 1.29e-48 167
Msa1079870 AT1G06650.2 31.680 363 204 11 20 364 20 356 1.38e-48 168
Msa1079870 AT5G08640.2 32.323 297 183 4 67 357 41 325 6.27e-48 166
Msa1079870 AT5G08640.1 32.323 297 183 4 67 357 41 325 6.27e-48 166
Msa1079870 AT2G06960.1 50.286 175 60 4 193 367 1 148 4.81e-47 157
Msa1079870 AT1G03410.2 30.704 355 203 12 20 357 14 342 6.71e-47 164
Msa1079870 AT3G51240.1 32.154 311 178 10 37 336 14 302 1.29e-46 163
Msa1079870 AT1G03410.1 30.704 355 203 12 20 357 51 379 1.88e-46 164
Msa1079870 AT1G06640.1 31.956 363 203 12 20 364 20 356 4.42e-46 162
Msa1079870 AT1G03400.1 30.791 354 208 10 20 364 14 339 8.60e-46 160
Msa1079870 AT1G15550.1 30.696 316 198 5 66 376 57 356 7.42e-45 158
Msa1079870 AT5G12270.1 32.500 360 216 7 25 377 20 359 9.48e-45 158
Msa1079870 AT4G16330.1 33.585 265 150 5 118 374 9 255 1.19e-44 155
Msa1079870 AT3G19010.3 29.377 337 162 7 50 362 12 296 1.74e-44 156
Msa1079870 AT5G51810.1 31.157 337 196 7 37 361 41 353 2.36e-44 157
Msa1079870 AT2G25450.1 30.556 360 208 11 20 364 15 347 3.85e-44 156
Msa1079870 AT5G05600.2 34.432 273 153 7 35 298 35 290 1.14e-43 153
Msa1079870 AT1G49390.1 30.321 343 207 9 18 349 1 322 1.40e-42 152
Msa1079870 AT5G20400.1 32.450 302 178 6 58 349 37 322 1.91e-42 152
Msa1079870 AT1G80340.1 31.353 303 187 5 66 363 50 336 1.97e-42 152
Msa1079870 AT5G54000.2 30.341 323 198 7 37 349 18 323 3.69e-42 151
Msa1079870 AT1G06620.2 32.639 288 158 8 20 297 21 282 4.82e-42 149
Msa1079870 AT3G19000.1 27.193 342 210 6 49 368 15 339 7.08e-42 150
Msa1079870 AT1G60980.1 29.825 342 197 8 38 361 36 352 1.82e-41 150
Msa1079870 AT2G30840.2 32.639 288 161 8 20 297 15 279 2.14e-41 148
Msa1079870 AT5G07200.1 28.488 344 206 7 36 361 35 356 3.26e-41 149
Msa1079870 AT5G20550.1 30.145 345 206 9 18 349 1 323 3.44e-41 148
Msa1079870 AT3G55970.2 33.942 274 158 10 35 298 22 282 1.20e-40 145
Msa1079870 AT1G78550.2 34.109 258 147 7 95 345 5 246 1.59e-40 145
Msa1079870 AT5G43450.2 32.734 278 161 7 25 297 23 279 4.06e-40 144
Msa1079870 AT5G43440.2 31.541 279 166 7 25 297 23 282 5.99e-40 144
Msa1079870 AT1G03400.2 28.534 382 208 11 20 364 14 367 9.36e-40 145
Msa1079870 AT5G54000.1 32.819 259 150 5 99 349 1 243 1.24e-38 139
Msa1079870 AT4G25420.2 33.579 271 144 9 38 294 40 288 2.08e-38 140
Msa1079870 AT1G49390.2 33.205 259 149 5 99 349 1 243 3.57e-38 138
Msa1079870 AT4G21200.1 31.802 283 165 8 62 337 38 299 6.40e-38 139
Msa1079870 AT1G12010.1 28.866 291 178 7 63 345 4 273 6.96e-38 139
Msa1079870 AT3G51240.2 35.526 228 121 7 118 336 8 218 7.49e-38 137
Msa1079870 AT1G05010.1 31.469 286 164 8 66 341 4 267 2.59e-37 137
Msa1079870 AT1G44090.1 27.778 342 207 8 38 363 43 360 3.16e-37 139
Msa1079870 AT1G04380.2 30.620 258 160 5 45 300 25 265 4.51e-37 135
Msa1079870 AT3G19010.2 29.710 276 150 6 48 299 10 265 1.21e-36 135
Msa1079870 AT1G62380.1 27.273 308 184 8 61 358 2 279 1.62e-36 135
Msa1079870 AT5G59540.2 32.414 290 161 10 20 298 19 284 2.40e-36 134
Msa1079870 AT1G80330.1 28.242 347 202 11 33 358 14 334 6.22e-36 134
Msa1079870 AT5G63590.1 30.717 293 180 6 63 347 11 288 9.45e-36 133
Msa1079870 AT2G19590.1 29.595 321 201 9 59 376 4 302 1.01e-35 133
Msa1079870 AT4G25300.2 36.275 204 116 3 175 377 72 262 2.74e-35 130
Msa1079870 AT4G25310.2 30.086 349 183 11 38 377 29 325 3.03e-35 132
Msa1079870 AT3G61400.2 29.617 287 175 8 21 298 20 288 1.53e-34 129
Msa1079870 AT3G49620.1 29.677 310 175 11 66 348 34 327 1.79e-34 130
Msa1079870 AT1G06650.1 30.450 289 169 8 20 298 20 286 1.96e-33 127
Msa1079870 AT5G63595.1 28.571 287 171 6 49 334 9 262 4.80e-33 125
Msa1079870 AT5G51810.2 31.047 277 155 7 37 301 41 293 7.31e-33 125
Msa1079870 AT1G78440.1 27.597 308 184 9 66 357 18 302 9.71e-33 125
Msa1079870 AT3G50210.4 30.201 298 171 11 66 336 8 295 1.67e-32 125
Msa1079870 AT3G50210.1 30.201 298 171 11 66 336 8 295 1.67e-32 125
Msa1079870 AT3G50210.3 30.201 298 171 11 66 336 8 295 1.67e-32 125
Msa1079870 AT5G63600.1 27.832 309 188 7 51 349 18 301 6.28e-32 123
Msa1079870 AT5G43935.1 28.956 297 177 7 65 358 18 283 1.22e-31 121
Msa1079870 AT1G06640.2 30.847 295 172 9 20 304 20 292 1.25e-31 122
Msa1079870 AT1G06640.3 31.228 285 164 9 20 294 20 282 1.60e-31 121
Msa1079870 AT5G63600.2 28.431 306 191 8 51 349 18 302 2.27e-31 121
Msa1079870 AT3G49630.1 28.956 297 171 9 66 336 9 291 3.06e-31 121
Msa1079870 AT3G49630.3 29.779 272 161 8 81 336 30 287 1.26e-30 119
Msa1079870 AT4G21690.1 26.102 295 192 6 86 367 61 342 4.82e-30 118
Msa1079870 AT1G50960.1 28.521 284 183 8 44 323 19 286 4.98e-30 118
Msa1079870 AT3G19000.2 25.714 280 169 6 49 306 15 277 4.46e-29 114
Msa1079870 AT1G30040.1 27.124 306 185 10 66 357 31 312 6.26e-28 112
Msa1079870 AT1G02400.1 26.019 319 206 8 43 349 1 301 3.06e-27 110
Msa1079870 AT3G46500.5 30.323 310 171 9 73 358 21 309 9.35e-27 109
Msa1079870 AT1G52820.1 25.776 322 197 11 64 368 10 306 3.25e-26 107
Msa1079870 AT5G63580.2 31.381 239 141 5 66 298 19 240 5.63e-26 105
Msa1079870 AT5G63580.1 31.646 237 139 5 66 296 19 238 5.94e-26 105
Msa1079870 AT2G19590.2 29.577 284 175 9 96 376 26 287 4.85e-25 103
Msa1079870 AT2G34555.1 27.532 316 196 10 66 371 27 319 2.10e-24 102
Msa1079870 AT3G46500.7 31.408 277 145 10 73 325 21 276 2.26e-22 96.3
Msa1079870 AT1G47990.1 28.383 303 177 11 66 352 15 293 3.07e-22 96.7
Msa1079870 AT1G14130.1 26.766 269 177 5 84 349 24 275 4.61e-22 95.9
Msa1079870 AT4G23340.1 26.235 324 193 9 63 368 7 302 1.15e-21 95.1
Msa1079870 AT1G28030.1 26.807 332 205 11 54 368 1 311 1.49e-21 94.7
Msa1079870 AT5G51310.1 27.500 280 172 7 63 330 2 262 8.59e-21 92.4
Msa1079870 AT3G50210.2 33.918 171 102 5 168 336 52 213 8.81e-21 90.9
Msa1079870 AT4G03070.1 25.538 325 197 13 63 367 11 310 9.09e-21 92.4
Msa1079870 AT4G22870.1 45.263 95 51 1 267 360 2 96 9.71e-21 87.0
Msa1079870 AT3G49630.2 28.634 227 134 8 124 336 6 218 6.45e-20 89.0
Msa1079870 AT3G46490.1 27.129 317 181 10 73 359 21 317 7.15e-20 90.1
Msa1079870 AT3G47190.1 23.442 337 207 9 44 361 7 311 1.64e-19 89.0
Msa1079870 AT1G14120.2 25.850 294 195 4 59 349 1 274 6.15e-19 87.0
Msa1079870 AT1G14120.1 25.850 294 195 4 59 349 1 274 6.15e-19 87.0
Msa1079870 AT1G14120.3 25.850 294 195 4 59 349 1 274 6.15e-19 87.0
Msa1079870 AT3G46500.4 42.241 116 61 2 249 359 60 174 6.23e-19 84.3
Msa1079870 AT3G46500.10 42.241 116 61 2 249 359 122 236 2.46e-18 84.0
Msa1079870 AT3G46500.1 42.241 116 61 2 249 359 122 236 2.46e-18 84.0
Msa1079870 AT3G46490.2 28.975 283 151 10 73 325 21 283 3.93e-18 84.7
Msa1079870 AT4G22870.2 40.816 98 54 2 267 360 40 137 8.97e-18 80.1
Msa1079870 AT5G58660.1 24.281 313 178 11 59 337 27 314 9.03e-18 84.3
Msa1079870 AT3G46480.1 41.880 117 62 2 248 359 155 270 1.86e-16 79.3
Msa1079870 AT4G16765.5 34.043 188 102 7 175 349 3 181 1.68e-15 75.1
Msa1079870 AT1G52820.2 23.904 251 151 8 64 298 10 236 1.70e-15 76.3
Msa1079870 AT1G30040.2 26.316 247 144 10 66 298 31 253 1.75e-15 76.3
Msa1079870 AT4G16765.3 43.119 109 54 3 247 349 121 227 2.83e-15 75.1
Msa1079870 AT1G35190.2 41.071 112 60 2 253 359 179 289 3.59e-15 75.9
Msa1079870 AT4G03050.2 32.540 126 83 2 245 368 271 396 4.29e-15 76.6
Msa1079870 AT4G03050.1 32.540 126 83 2 245 368 271 396 4.29e-15 76.6
Msa1079870 AT1G35190.1 41.071 112 60 2 253 359 202 312 4.60e-15 75.9
Msa1079870 AT4G16765.6 42.202 109 55 3 247 349 121 227 9.62e-15 73.9
Msa1079870 AT4G16765.1 42.202 109 55 3 247 349 121 227 9.62e-15 73.9
Msa1079870 AT4G16765.2 42.202 109 55 3 247 349 121 227 9.62e-15 73.9
Msa1079870 AT4G23340.2 28.058 139 96 2 234 368 46 184 1.00e-14 72.8
Msa1079870 AT1G52800.1 23.676 321 206 10 65 370 9 305 1.56e-14 74.3
Msa1079870 AT3G46500.6 51.220 82 34 3 249 325 91 171 4.41e-14 70.9
Msa1079870 AT3G46500.8 51.220 82 34 3 249 325 91 171 4.41e-14 70.9
Msa1079870 AT3G46500.3 51.220 82 34 3 249 325 122 202 8.18e-14 70.5
Msa1079870 AT1G15540.1 24.471 331 203 12 60 369 3 307 2.37e-13 70.9
Msa1079870 AT1G15540.4 24.471 331 203 12 60 369 3 307 2.37e-13 70.9
Msa1079870 AT1G15540.2 24.471 331 203 12 60 369 6 310 2.61e-13 70.5
Msa1079870 AT1G15540.3 24.471 331 203 12 60 369 10 314 3.01e-13 70.5
Msa1079870 AT1G02400.2 22.261 283 191 7 43 314 1 265 3.25e-13 69.7
Msa1079870 AT3G46500.9 40.000 100 54 2 265 359 114 212 9.32e-12 64.7

Find 102 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCCCTAAACTTTCT+AGG 0.166620 7_2:+79076103 None:intergenic
ATTGATTTCACTGATCTTAT+TGG 0.180414 7_2:-79078223 Msa1079870:CDS
TCAAGAGCTTGTAGCCTATT+TGG 0.181404 7_2:+79078199 None:intergenic
TTTCTTTGGCCTCCTCTTCT+TGG 0.203445 7_2:+79076073 None:intergenic
CCTAGAAAGTTTAGGGATTA+TGG 0.212781 7_2:-79076103 Msa1079870:CDS
AAGATCAGTGAAATCAATTA+TGG 0.215332 7_2:+79078228 None:intergenic
TAAGCCATTTGTCTTGATAT+TGG 0.252422 7_2:+79075878 None:intergenic
TTTGTAATCCTTTGCCTGAT+TGG 0.263926 7_2:-79077005 Msa1079870:CDS
AATATATGGATGGTTCAAAA+TGG 0.264814 7_2:+79078812 None:intergenic
AATGCTTTCGTTGTCAATAT+TGG 0.274398 7_2:-79075838 Msa1079870:CDS
TTCTCTTCATCAATGAGTTT+TGG 0.284155 7_2:+79075206 None:intergenic
GCTGGAAACATATACTTCTT+TGG 0.286117 7_2:+79078313 None:intergenic
ACATTTGTTCTTGACAATAA+TGG 0.292679 7_2:-79076133 Msa1079870:CDS
ATGCACCCTCACTCTGATTA+TGG 0.304528 7_2:-79075946 Msa1079870:CDS
CACAAGAGAAACCAAGAAAA+AGG 0.313151 7_2:-79075132 Msa1079870:CDS
GAAGCCATCCTAGAAAGTTT+AGG 0.318147 7_2:-79076111 Msa1079870:CDS
CTGATCTTATTGGTCCAAAT+AGG 0.329604 7_2:-79078213 Msa1079870:CDS
AAGCCATCCTAGAAAGTTTA+GGG 0.338086 7_2:-79076110 Msa1079870:CDS
TCATCATTCATTGCCATTGC+AGG 0.340430 7_2:+79078421 None:intergenic
GCCAATGCTTGTGAACAATA+TGG 0.342407 7_2:-79078169 Msa1079870:CDS
CCAAGGGTTAGGTCTGGTTC+AGG 0.342949 7_2:+79075970 None:intergenic
GAAGTATATGTTTCCAGCTT+CGG 0.353233 7_2:-79078308 Msa1079870:CDS
CAATATTGGTGATCATTTAG+AGG 0.360710 7_2:-79075824 Msa1079870:intron
TAATAATATTATGAAAGAAT+TGG 0.362638 7_2:-79076037 Msa1079870:CDS
ACAACGAAAGCATTGGGAAT+AGG 0.371236 7_2:+79075847 None:intergenic
AATGGGGAGGCAGGCCAATC+AGG 0.371866 7_2:+79076991 None:intergenic
TTTGGTTTCTTCTGCATAGC+TGG 0.380859 7_2:+79076155 None:intergenic
ACCTTAGGTGGAGAAATATA+TGG 0.382554 7_2:+79078798 None:intergenic
TATTGTCAAGAACAAATGTT+TGG 0.389089 7_2:+79076137 None:intergenic
ATGAGAGCAGCTGTGAGATA+TGG 0.390983 7_2:-79077087 Msa1079870:CDS
GGAAAGACCCACAAAGAGTA+TGG 0.391049 7_2:-79078287 Msa1079870:CDS
TGAATCATCCATACTCTTTG+TGG 0.395543 7_2:+79078279 None:intergenic
TGATTGGCCTGCCTCCCCAT+TGG 0.400016 7_2:-79076989 Msa1079870:CDS
TCAAAATGGGCTTAGAAAGT+TGG 0.411916 7_2:+79078826 None:intergenic
TTTGTGGGTCTTTCCGAAGC+TGG 0.412657 7_2:+79078295 None:intergenic
TTTGGCCTCCTCTTCTTGGT+TGG 0.413308 7_2:+79076077 None:intergenic
GAGTGTATTACATAGGGTTC+TGG 0.416452 7_2:-79075303 Msa1079870:CDS
GTGAAGCATTTGTATGAGAA+AGG 0.418269 7_2:-79078352 Msa1079870:CDS
ATTAGATATTGAAGTGATCA+AGG 0.422513 7_2:-79075031 Msa1079870:three_prime_UTR
TCTGTGTCCATGTAACGCTT+TGG 0.429309 7_2:+79075182 None:intergenic
GCAAACCCTCTACTTCATCT+TGG 0.436198 7_2:+79075905 None:intergenic
GAATCATCCATACTCTTTGT+GGG 0.437196 7_2:+79078280 None:intergenic
GTTAGGTCTGGTTCAGGGCA+TGG 0.437319 7_2:+79075976 None:intergenic
TCCATATTGTTCACAAGCAT+TGG 0.440200 7_2:+79078168 None:intergenic
TGCATTCCAAGGGTTAGGTC+TGG 0.442740 7_2:+79075964 None:intergenic
TGAGAGCAGCTGTGAGATAT+GGG 0.459658 7_2:-79077086 Msa1079870:CDS
CAAAAGACTCAGTGTTCTGT+TGG 0.465360 7_2:-79077047 Msa1079870:CDS
AGATCAGTGAAATCAATTAT+GGG 0.469482 7_2:+79078229 None:intergenic
ATATATGGATGGTTCAAAAT+GGG 0.469520 7_2:+79078813 None:intergenic
TGAAAGTCCAATGGGGAGGC+AGG 0.469731 7_2:+79076982 None:intergenic
ACACTTACTGAAAGTCCAAT+GGG 0.477635 7_2:+79076974 None:intergenic
TGAGAAAGGTTATCTTCATA+AGG 0.478022 7_2:-79078338 Msa1079870:CDS
AAATCCAATATCAAGACAAA+TGG 0.490894 7_2:-79075882 Msa1079870:CDS
ATAGAAAATGAATATCATAA+AGG 0.491733 7_2:-79078376 Msa1079870:CDS
AGGAGCATCATAGATGTTGT+AGG 0.494826 7_2:-79077162 Msa1079870:CDS
AAGATTCTTCGATCTTCCAT+TGG 0.494960 7_2:-79077139 Msa1079870:CDS
ATTCTTCGATCTTCCATTGG+AGG 0.496137 7_2:-79077136 Msa1079870:CDS
TTATGAAAGAATTGGACAAT+GGG 0.508435 7_2:-79076029 Msa1079870:CDS
AATATTGACAACGAAAGCAT+TGG 0.511145 7_2:+79075840 None:intergenic
GAGGGTGCATTCCAAGGGTT+AGG 0.514102 7_2:+79075959 None:intergenic
AATACAAGAGTGTATTACAT+AGG 0.514652 7_2:-79075310 Msa1079870:CDS
TGGAAATTGAGAAAGAAGGT+TGG 0.520757 7_2:+79078846 None:intergenic
GGATGATTCAAATGTTGCTA+AGG 0.521576 7_2:-79078266 Msa1079870:CDS
GGTCTGGTTCAGGGCATGGT+GGG 0.524285 7_2:+79075980 None:intergenic
TCCATATATTTCTCCACCTA+AGG 0.526137 7_2:-79078799 Msa1079870:intron
GGTCTCACAGTGCAGTCAAA+AGG 0.526151 7_2:+79075233 None:intergenic
ATTATGAAAGAATTGGACAA+TGG 0.526425 7_2:-79076030 Msa1079870:CDS
CAGAGTGAGGGTGCATTCCA+AGG 0.530113 7_2:+79075953 None:intergenic
CAAGGGTTAGGTCTGGTTCA+GGG 0.530803 7_2:+79075971 None:intergenic
AAGACTCAGTGTTCTGTTGG+AGG 0.531960 7_2:-79077044 Msa1079870:CDS
ATATTGACAACGAAAGCATT+GGG 0.534396 7_2:+79075841 None:intergenic
AATCCCTAAACTTTCTAGGA+TGG 0.536503 7_2:+79076107 None:intergenic
AAGTTGGAAATTGAGAAAGA+AGG 0.541319 7_2:+79078842 None:intergenic
AGAGAATCCAAAGCGTTACA+TGG 0.543467 7_2:-79075189 Msa1079870:CDS
TACTTAGCTCTCTCCTCCAA+TGG 0.547880 7_2:+79077123 None:intergenic
AGGTCTGGTTCAGGGCATGG+TGG 0.548005 7_2:+79075979 None:intergenic
TCCAAGTTAACTACCTTAGG+TGG 0.549105 7_2:+79078786 None:intergenic
AACCCTCTACTTCATCTTGG+AGG 0.550913 7_2:+79075908 None:intergenic
GGACAATGGGAGCCAGATGT+TGG 0.553902 7_2:-79076016 Msa1079870:CDS
AGACTCAGTGTTCTGTTGGA+GGG 0.559012 7_2:-79077043 Msa1079870:CDS
ATACAAGAGTGTATTACATA+GGG 0.568540 7_2:-79075309 Msa1079870:CDS
AACACTTACTGAAAGTCCAA+TGG 0.582866 7_2:+79076973 None:intergenic
GTTACGCATGTCTCCTGCAA+TGG 0.583325 7_2:-79078434 Msa1079870:exon
AGCTAAGAGCAGAGTATCAG+TGG 0.587185 7_2:-79075273 Msa1079870:CDS
GAGGCAGGCCAATCAGGCAA+AGG 0.590329 7_2:+79076997 None:intergenic
CCTGAACCAGACCTAACCCT+TGG 0.596646 7_2:-79075970 Msa1079870:CDS
CTCCTCCAAGATGAAGTAGA+GGG 0.601405 7_2:-79075910 Msa1079870:CDS
AATGAATGATGAAAAGAATG+AGG 0.605075 7_2:-79078410 Msa1079870:CDS
TTAGATATTGAAGTGATCAA+GGG 0.611034 7_2:-79075030 Msa1079870:three_prime_UTR
TCTCCTCCAAGATGAAGTAG+AGG 0.615685 7_2:-79075911 Msa1079870:CDS
TCACAGTGCAGTCAAAAGGA+AGG 0.626843 7_2:+79075237 None:intergenic
ATTTATCAGATATTTAGCAA+CGG 0.627515 7_2:-79075335 Msa1079870:intron
AGAGTGAGGGTGCATTCCAA+GGG 0.630347 7_2:+79075954 None:intergenic
TATGGAAGCCAACCAAGAAG+AGG 0.632911 7_2:-79076085 Msa1079870:CDS
AGGAAGCCATAATCAGAGTG+AGG 0.633988 7_2:+79075940 None:intergenic
GGAAGCCAACCAAGAAGAGG+AGG 0.638943 7_2:-79076082 Msa1079870:CDS
TAGGTGGAGAAATATATGGA+TGG 0.656760 7_2:+79078802 None:intergenic
GGAAGCCATAATCAGAGTGA+GGG 0.666717 7_2:+79075941 None:intergenic
CATCTTGGAGGAGAAGTGTG+AGG 0.689367 7_2:+79075920 None:intergenic
TTACTGAAAGTCCAATGGGG+AGG 0.691760 7_2:+79076978 None:intergenic
ACATATCAGATGATATAACA+AGG 0.708459 7_2:-79077182 Msa1079870:CDS
CACTTACTGAAAGTCCAATG+GGG 0.774600 7_2:+79076975 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATAATAATATGAATTA+AGG + chr7_2:79076947-79076966 None:intergenic 10.0%
!!! ATATTATTATTTCATTGATT+TGG - chr7_2:79076953-79076972 Msa1079870:intron 10.0%
!!! TTTTGTTAATTAATCAAATT+TGG - chr7_2:79077048-79077067 Msa1079870:CDS 10.0%
!! TAATAATATTATGAAAGAAT+TGG - chr7_2:79077838-79077857 Msa1079870:intron 10.0%
!!! TTAATGTTAGTTTATTAATT+TGG + chr7_2:79078128-79078147 None:intergenic 10.0%
!!! TTTTTTTTTATAGTCAAAGT+TGG - chr7_2:79075180-79075199 Msa1079870:CDS 15.0%
!!! TTTTTTTTATAGTCAAAGTT+GGG - chr7_2:79075181-79075200 Msa1079870:CDS 15.0%
!!! TTGATATAATTTACTTTTAC+AGG - chr7_2:79075419-79075438 Msa1079870:intron 15.0%
!! ATAGAAAATGAATATCATAA+AGG - chr7_2:79075499-79075518 Msa1079870:intron 15.0%
!! TCAAAATCTACATTTAAATT+TGG + chr7_2:79076011-79076030 None:intergenic 15.0%
!!! AATGTAGATTTTGATTTTAA+AGG - chr7_2:79076017-79076036 Msa1079870:CDS 15.0%
!! TATTGTTAGACAAATAAATT+AGG + chr7_2:79076226-79076245 None:intergenic 15.0%
!! GACAAAATATTAAAATAGTA+AGG - chr7_2:79077087-79077106 Msa1079870:CDS 15.0%
!! TTGTAAATCATTATTCAAAA+TGG - chr7_2:79077196-79077215 Msa1079870:CDS 15.0%
!!! TTGTTACTATTATTTTAAAC+AGG - chr7_2:79077687-79077706 Msa1079870:intron 15.0%
!!! TGTTACTATTATTTTAAACA+GGG - chr7_2:79077688-79077707 Msa1079870:intron 15.0%
!! ATTAATAAACTAACTCATAT+GGG - chr7_2:79078143-79078162 Msa1079870:intron 15.0%
!!! AATTGTAAACATTTTTTGAA+TGG + chr7_2:79078217-79078236 None:intergenic 15.0%
!!! CAAAAAATGTTTACAATTTT+TGG - chr7_2:79078219-79078238 Msa1079870:CDS 15.0%
!! TTTAAGAAAAAAAATCTTTG+AGG - chr7_2:79078305-79078324 Msa1079870:CDS 15.0%
!!! TTTTTTTATAGTCAAAGTTG+GGG - chr7_2:79075182-79075201 Msa1079870:CDS 20.0%
!! TTAAATCAATTCTTACAAAC+TGG - chr7_2:79075243-79075262 Msa1079870:CDS 20.0%
!! ATAGTATTTGATTCTTGTTA+GGG + chr7_2:79075893-79075912 None:intergenic 20.0%
!! TATAGTATTTGATTCTTGTT+AGG + chr7_2:79075894-79075913 None:intergenic 20.0%
!! TTCCTAGAAAAATTTCAATT+TGG - chr7_2:79076129-79076148 Msa1079870:CDS 20.0%
!!! GCTATATTCGATTTTTATAT+TGG - chr7_2:79076314-79076333 Msa1079870:intron 20.0%
!! TATTGGTCATAATTCATTTA+AGG - chr7_2:79076331-79076350 Msa1079870:intron 20.0%
!!! CTAACTTGTTTTTATAAAGA+AGG + chr7_2:79076361-79076380 None:intergenic 20.0%
!! AATTAATCAAATTTGGTTAC+AGG - chr7_2:79077055-79077074 Msa1079870:CDS 20.0%
!!! TATCAATGTGTAGAATTTTA+AGG + chr7_2:79077132-79077151 None:intergenic 20.0%
!! TAGTTCAATACTATGTAAAT+TGG - chr7_2:79077156-79077175 Msa1079870:CDS 20.0%
!! TTATTAATTTCTAACGTTAG+AGG - chr7_2:79077224-79077243 Msa1079870:intron 20.0%
!!! CTTATTTTTCTATGAAACTT+AGG - chr7_2:79077316-79077335 Msa1079870:intron 20.0%
!!! ACAAATTAGTTTTTGTATGA+TGG - chr7_2:79077394-79077413 Msa1079870:intron 20.0%
!!! TAAATTAGTCTTTGAAATTG+TGG + chr7_2:79077605-79077624 None:intergenic 20.0%
!! CATTAATAAACTAACTCATA+TGG - chr7_2:79078142-79078161 Msa1079870:intron 20.0%
!! ATTTATCAGATATTTAGCAA+CGG - chr7_2:79078540-79078559 Msa1079870:intron 20.0%
!!! TTATGTGTATGTTAATTTTC+TGG + chr7_2:79078781-79078800 None:intergenic 20.0%
! ATATATGGATGGTTCAAAAT+GGG + chr7_2:79075065-79075084 None:intergenic 25.0%
! AATATATGGATGGTTCAAAA+TGG + chr7_2:79075066-79075085 None:intergenic 25.0%
! TTATATATGGATCAATCTTC+AGG + chr7_2:79075276-79075295 None:intergenic 25.0%
! CATGAACATGTGTTTATATA+TGG + chr7_2:79075289-79075308 None:intergenic 25.0%
!!! TTGTTTTTTCTTCACATTCT+TGG - chr7_2:79075370-79075389 Msa1079870:intron 25.0%
! AATGAATGATGAAAAGAATG+AGG - chr7_2:79075465-79075484 Msa1079870:intron 25.0%
! AGATCAGTGAAATCAATTAT+GGG + chr7_2:79075649-79075668 None:intergenic 25.0%
! AAGATCAGTGAAATCAATTA+TGG + chr7_2:79075650-79075669 None:intergenic 25.0%
!! ATTGATTTCACTGATCTTAT+TGG - chr7_2:79075652-79075671 Msa1079870:intron 25.0%
! TGTTTAAACTGTAATGTCTT+AGG - chr7_2:79075771-79075790 Msa1079870:intron 25.0%
!! TCATTGTCTTTTCTATTAAC+AGG - chr7_2:79075830-79075849 Msa1079870:CDS 25.0%
! GTAAGAAAAAGTTGAATTTC+AGG + chr7_2:79075871-79075890 None:intergenic 25.0%
!! CTCCAAATTGAAATTTTTCT+AGG + chr7_2:79076134-79076153 None:intergenic 25.0%
! AACTTTGTCTTTAATATACG+TGG - chr7_2:79076584-79076603 Msa1079870:intron 25.0%
! ACTTTGTCTTTAATATACGT+GGG - chr7_2:79076585-79076604 Msa1079870:intron 25.0%
! ACATATCAGATGATATAACA+AGG - chr7_2:79076693-79076712 Msa1079870:intron 25.0%
! AATCAAAGCAAATTCATCAA+TGG - chr7_2:79076992-79077011 Msa1079870:CDS 25.0%
! ATCAAAGCAAATTCATCAAT+GGG - chr7_2:79076993-79077012 Msa1079870:CDS 25.0%
!! TAGGTAAATATACTTGCTAA+TGG - chr7_2:79077359-79077378 Msa1079870:intron 25.0%
!! GACATCAATTAACAGTTTTT+GGG + chr7_2:79077583-79077602 None:intergenic 25.0%
!!! TATTATTTTAAACAGGGAAG+TGG - chr7_2:79077694-79077713 Msa1079870:intron 25.0%
! TATTGTCAAGAACAAATGTT+TGG + chr7_2:79077741-79077760 None:intergenic 25.0%
! ACATTTGTTCTTGACAATAA+TGG - chr7_2:79077742-79077761 Msa1079870:intron 25.0%
!!! ATTGTTGTTGTCATTTTCTT+TGG + chr7_2:79077819-79077838 None:intergenic 25.0%
! ATTATGAAAGAATTGGACAA+TGG - chr7_2:79077845-79077864 Msa1079870:intron 25.0%
! TTATGAAAGAATTGGACAAT+GGG - chr7_2:79077846-79077865 Msa1079870:intron 25.0%
! AAATCCAATATCAAGACAAA+TGG - chr7_2:79077993-79078012 Msa1079870:intron 25.0%
!! AATCTTATTTGAGGTAATGT+GGG + chr7_2:79078245-79078264 None:intergenic 25.0%
!! TAATCTTATTTGAGGTAATG+TGG + chr7_2:79078246-79078265 None:intergenic 25.0%
!! TGAAAAGGTAATCTTATTTG+AGG + chr7_2:79078254-79078273 None:intergenic 25.0%
!! CAAATAAGATTACCTTTTCA+TGG - chr7_2:79078254-79078273 Msa1079870:CDS 25.0%
! AATAGAATTCTTCCATGAAA+AGG + chr7_2:79078269-79078288 None:intergenic 25.0%
! TATGAATTGAATCATTTGAG+TGG - chr7_2:79078432-79078451 Msa1079870:exon 25.0%
!!! TGTACTGACTTTTTTTATGT+TGG - chr7_2:79078512-79078531 Msa1079870:intron 25.0%
!! AATACAAGAGTGTATTACAT+AGG - chr7_2:79078565-79078584 Msa1079870:intron 25.0%
!! ATACAAGAGTGTATTACATA+GGG - chr7_2:79078566-79078585 Msa1079870:intron 25.0%
! ATTAGATATTGAAGTGATCA+AGG - chr7_2:79078844-79078863 Msa1079870:five_prime_UTR 25.0%
AAGTTGGAAATTGAGAAAGA+AGG + chr7_2:79075036-79075055 None:intergenic 30.0%
! TTTTCCAAGTTAACTACCTT+AGG + chr7_2:79075095-79075114 None:intergenic 30.0%
CATTCTTGGAAGATTACATA+TGG - chr7_2:79075384-79075403 Msa1079870:intron 30.0%
TGAGAAAGGTTATCTTCATA+AGG - chr7_2:79075537-79075556 Msa1079870:intron 30.0%
! TGAACAATATGGATTTTTCC+AGG - chr7_2:79075717-79075736 Msa1079870:intron 30.0%
ATCAAATACTATATCCCTTG+TGG - chr7_2:79075901-79075920 Msa1079870:CDS 30.0%
ACACACACATTCAATTACAT+CGG - chr7_2:79075959-79075978 Msa1079870:CDS 30.0%
TGTCTTTATGTTGTCTAATG+TGG - chr7_2:79076096-79076115 Msa1079870:CDS 30.0%
GTCTTTATGTTGTCTAATGT+GGG - chr7_2:79076097-79076116 Msa1079870:CDS 30.0%
AATATAGCTCAACATGCATT+AGG + chr7_2:79076302-79076321 None:intergenic 30.0%
TCTTTAATATACGTGGGATT+TGG - chr7_2:79076591-79076610 Msa1079870:intron 30.0%
CATGTTCAAGACAAATTTGT+AGG - chr7_2:79077340-79077359 Msa1079870:intron 30.0%
!! TTAGTTTTTGTATGATGGTG+TGG - chr7_2:79077399-79077418 Msa1079870:intron 30.0%
ACTTGCCTAAAAAAAGACTA+TGG + chr7_2:79077474-79077493 None:intergenic 30.0%
! GGACATCAATTAACAGTTTT+TGG + chr7_2:79077584-79077603 None:intergenic 30.0%
AAAAATTGGTTACCAACATC+TGG + chr7_2:79077874-79077893 None:intergenic 30.0%
TAAGCCATTTGTCTTGATAT+TGG + chr7_2:79078000-79078019 None:intergenic 30.0%
!! ATATTGACAACGAAAGCATT+GGG + chr7_2:79078037-79078056 None:intergenic 30.0%
! AATATTGACAACGAAAGCAT+TGG + chr7_2:79078038-79078057 None:intergenic 30.0%
AATGCTTTCGTTGTCAATAT+TGG - chr7_2:79078037-79078056 Msa1079870:intron 30.0%
! CAATATTGGTGATCATTTAG+AGG - chr7_2:79078051-79078070 Msa1079870:intron 30.0%
TGTTACGTGCAAATGATATT+TGG - chr7_2:79078339-79078358 Msa1079870:CDS 30.0%
!!! ACTGACTTTTTTTATGTTGG+TGG - chr7_2:79078515-79078534 Msa1079870:intron 30.0%
! TTCTCTTCATCAATGAGTTT+TGG + chr7_2:79078672-79078691 None:intergenic 30.0%
! ATGTTAATTTTCTGGACTCT+AGG + chr7_2:79078773-79078792 None:intergenic 30.0%
! TCAAAATGGGCTTAGAAAGT+TGG + chr7_2:79075052-79075071 None:intergenic 35.0%
TAGGTGGAGAAATATATGGA+TGG + chr7_2:79075076-79075095 None:intergenic 35.0%
TCCATATATTTCTCCACCTA+AGG - chr7_2:79075076-79075095 Msa1079870:three_prime_UTR 35.0%
ACCTTAGGTGGAGAAATATA+TGG + chr7_2:79075080-79075099 None:intergenic 35.0%
! GTGAAGCATTTGTATGAGAA+AGG - chr7_2:79075523-79075542 Msa1079870:intron 35.0%
GCTGGAAACATATACTTCTT+TGG + chr7_2:79075565-79075584 None:intergenic 35.0%
GAAGTATATGTTTCCAGCTT+CGG - chr7_2:79075567-79075586 Msa1079870:intron 35.0%
GAATCATCCATACTCTTTGT+GGG + chr7_2:79075598-79075617 None:intergenic 35.0%
TGAATCATCCATACTCTTTG+TGG + chr7_2:79075599-79075618 None:intergenic 35.0%
GGATGATTCAAATGTTGCTA+AGG - chr7_2:79075609-79075628 Msa1079870:intron 35.0%
CTGATCTTATTGGTCCAAAT+AGG - chr7_2:79075662-79075681 Msa1079870:intron 35.0%
TCCATATTGTTCACAAGCAT+TGG + chr7_2:79075710-79075729 None:intergenic 35.0%
! CAATATGGATTTTTCCAGGT+AGG - chr7_2:79075721-79075740 Msa1079870:intron 35.0%
! GATTTTTCCAGGTAGGAAAT+TGG - chr7_2:79075728-79075747 Msa1079870:intron 35.0%
TTGTTTACCAATTTCCTACC+TGG + chr7_2:79075738-79075757 None:intergenic 35.0%
TACTATATCCCTTGTGGATT+TGG - chr7_2:79075907-79075926 Msa1079870:CDS 35.0%
AAGATTCTTCGATCTTCCAT+TGG - chr7_2:79076736-79076755 Msa1079870:intron 35.0%
!! GTCTTTTGTTTGACTGAAAC+TGG + chr7_2:79076816-79076835 None:intergenic 35.0%
TTTGTAATCCTTTGCCTGAT+TGG - chr7_2:79076870-79076889 Msa1079870:intron 35.0%
ACACTTACTGAAAGTCCAAT+GGG + chr7_2:79076904-79076923 None:intergenic 35.0%
AACACTTACTGAAAGTCCAA+TGG + chr7_2:79076905-79076924 None:intergenic 35.0%
ACTATAAGATAGACCCCAAT+GGG + chr7_2:79077020-79077039 None:intergenic 35.0%
TACTATAAGATAGACCCCAA+TGG + chr7_2:79077021-79077040 None:intergenic 35.0%
AACGTATAGTGTCACATGTA+TGG + chr7_2:79077266-79077285 None:intergenic 35.0%
!! TATTTTAAACAGGGAAGTGG+TGG - chr7_2:79077697-79077716 Msa1079870:intron 35.0%
AAGCCATCCTAGAAAGTTTA+GGG - chr7_2:79077765-79077784 Msa1079870:intron 35.0%
! AATCCCTAAACTTTCTAGGA+TGG + chr7_2:79077771-79077790 None:intergenic 35.0%
CCATAATCCCTAAACTTTCT+AGG + chr7_2:79077775-79077794 None:intergenic 35.0%
CCTAGAAAGTTTAGGGATTA+TGG - chr7_2:79077772-79077791 Msa1079870:intron 35.0%
ACTCATATGGGTTTAGTAGA+AGG - chr7_2:79078155-79078174 Msa1079870:intron 35.0%
!! TCATCAATGAGTTTTGGTGA+CGG + chr7_2:79078666-79078685 None:intergenic 35.0%
! CTTTTTCTTGGTTTCTCTTG+TGG + chr7_2:79078745-79078764 None:intergenic 35.0%
CACAAGAGAAACCAAGAAAA+AGG - chr7_2:79078743-79078762 Msa1079870:intron 35.0%
!! CTCTAGGAAATCCTTTTTCT+TGG + chr7_2:79078757-79078776 None:intergenic 35.0%
TCCACCTAAGGTAGTTAACT+TGG - chr7_2:79075088-79075107 Msa1079870:exon 40.0%
TCCAAGTTAACTACCTTAGG+TGG + chr7_2:79075092-79075111 None:intergenic 40.0%
TCATCATTCATTGCCATTGC+AGG + chr7_2:79075457-79075476 None:intergenic 40.0%
TCAAGAGCTTGTAGCCTATT+TGG + chr7_2:79075679-79075698 None:intergenic 40.0%
GCCAATGCTTGTGAACAATA+TGG - chr7_2:79075706-79075725 Msa1079870:intron 40.0%
CACACAATCCAAATCCACAA+GGG + chr7_2:79075918-79075937 None:intergenic 40.0%
ACACACAATCCAAATCCACA+AGG + chr7_2:79075919-79075938 None:intergenic 40.0%
ATCAATGTAGCGACTGATTG+AGG - chr7_2:79076042-79076061 Msa1079870:CDS 40.0%
!! AGGAGCATCATAGATGTTGT+AGG - chr7_2:79076713-79076732 Msa1079870:intron 40.0%
ATTCTTCGATCTTCCATTGG+AGG - chr7_2:79076739-79076758 Msa1079870:intron 40.0%
CAAAAGACTCAGTGTTCTGT+TGG - chr7_2:79076828-79076847 Msa1079870:intron 40.0%
CACTTACTGAAAGTCCAATG+GGG + chr7_2:79076903-79076922 None:intergenic 40.0%
AATTCATCAATGGGTCCCAT+TGG - chr7_2:79077002-79077021 Msa1079870:CDS 40.0%
ATTCATCAATGGGTCCCATT+GGG - chr7_2:79077003-79077022 Msa1079870:CDS 40.0%
!!! CGCTGCCATAGTCTTTTTTT+AGG - chr7_2:79077466-79077485 Msa1079870:intron 40.0%
! TTTGGTTTCTTCTGCATAGC+TGG + chr7_2:79077723-79077742 None:intergenic 40.0%
GAAGCCATCCTAGAAAGTTT+AGG - chr7_2:79077764-79077783 Msa1079870:intron 40.0%
!! ACAACGAAAGCATTGGGAAT+AGG + chr7_2:79078031-79078050 None:intergenic 40.0%
GAGTGTATTACATAGGGTTC+TGG - chr7_2:79078572-79078591 Msa1079870:intron 40.0%
! AGAGAATCCAAAGCGTTACA+TGG - chr7_2:79078686-79078705 Msa1079870:intron 40.0%
GGAAAGACCCACAAAGAGTA+TGG - chr7_2:79075588-79075607 Msa1079870:intron 45.0%
CAATAATACCGAGCGTGAAG+AGG + chr7_2:79076426-79076445 None:intergenic 45.0%
GCTGAATCGATAGACTCTGA+TGG - chr7_2:79076476-79076495 Msa1079870:intron 45.0%
! TACTTAGCTCTCTCCTCCAA+TGG + chr7_2:79076755-79076774 None:intergenic 45.0%
ATGAGAGCAGCTGTGAGATA+TGG - chr7_2:79076788-79076807 Msa1079870:intron 45.0%
TGAGAGCAGCTGTGAGATAT+GGG - chr7_2:79076789-79076808 Msa1079870:intron 45.0%
AAGACTCAGTGTTCTGTTGG+AGG - chr7_2:79076831-79076850 Msa1079870:intron 45.0%
AGACTCAGTGTTCTGTTGGA+GGG - chr7_2:79076832-79076851 Msa1079870:intron 45.0%
TTACTGAAAGTCCAATGGGG+AGG + chr7_2:79076900-79076919 None:intergenic 45.0%
TTCATCAATGGGTCCCATTG+GGG - chr7_2:79077004-79077023 Msa1079870:CDS 45.0%
TATGGAAGCCAACCAAGAAG+AGG - chr7_2:79077790-79077809 Msa1079870:intron 45.0%
TTTCTTTGGCCTCCTCTTCT+TGG + chr7_2:79077805-79077824 None:intergenic 45.0%
!! AGGGCATGGTGGGTAAAAAT+TGG + chr7_2:79077888-79077907 None:intergenic 45.0%
ATGCACCCTCACTCTGATTA+TGG - chr7_2:79077929-79077948 Msa1079870:intron 45.0%
GGAAGCCATAATCAGAGTGA+GGG + chr7_2:79077937-79077956 None:intergenic 45.0%
AGGAAGCCATAATCAGAGTG+AGG + chr7_2:79077938-79077957 None:intergenic 45.0%
TCTCCTCCAAGATGAAGTAG+AGG - chr7_2:79077964-79077983 Msa1079870:intron 45.0%
CTCCTCCAAGATGAAGTAGA+GGG - chr7_2:79077965-79077984 Msa1079870:intron 45.0%
AACCCTCTACTTCATCTTGG+AGG + chr7_2:79077970-79077989 None:intergenic 45.0%
GCAAACCCTCTACTTCATCT+TGG + chr7_2:79077973-79077992 None:intergenic 45.0%
! AGCTAAGAGCAGAGTATCAG+TGG - chr7_2:79078602-79078621 Msa1079870:intron 45.0%
TCACAGTGCAGTCAAAAGGA+AGG + chr7_2:79078641-79078660 None:intergenic 45.0%
TCTGTGTCCATGTAACGCTT+TGG + chr7_2:79078696-79078715 None:intergenic 45.0%
GTTACGCATGTCTCCTGCAA+TGG - chr7_2:79075441-79075460 Msa1079870:intron 50.0%
TTTGTGGGTCTTTCCGAAGC+TGG + chr7_2:79075583-79075602 None:intergenic 50.0%
TCGATACACCTCTTCACGCT+CGG - chr7_2:79076415-79076434 Msa1079870:intron 50.0%
TTTGGCCTCCTCTTCTTGGT+TGG + chr7_2:79077801-79077820 None:intergenic 50.0%
! CAAGGGTTAGGTCTGGTTCA+GGG + chr7_2:79077907-79077926 None:intergenic 50.0%
TGCATTCCAAGGGTTAGGTC+TGG + chr7_2:79077914-79077933 None:intergenic 50.0%
! AGAGTGAGGGTGCATTCCAA+GGG + chr7_2:79077924-79077943 None:intergenic 50.0%
! CATCTTGGAGGAGAAGTGTG+AGG + chr7_2:79077958-79077977 None:intergenic 50.0%
GGTCTCACAGTGCAGTCAAA+AGG + chr7_2:79078645-79078664 None:intergenic 50.0%
TGAAAGTCCAATGGGGAGGC+AGG + chr7_2:79076896-79076915 None:intergenic 55.0%
GGAAGCCAACCAAGAAGAGG+AGG - chr7_2:79077793-79077812 Msa1079870:intron 55.0%
GGACAATGGGAGCCAGATGT+TGG - chr7_2:79077859-79077878 Msa1079870:intron 55.0%
! GTTAGGTCTGGTTCAGGGCA+TGG + chr7_2:79077902-79077921 None:intergenic 55.0%
! CCAAGGGTTAGGTCTGGTTC+AGG + chr7_2:79077908-79077927 None:intergenic 55.0%
CCTGAACCAGACCTAACCCT+TGG - chr7_2:79077905-79077924 Msa1079870:intron 55.0%
! GAGGGTGCATTCCAAGGGTT+AGG + chr7_2:79077919-79077938 None:intergenic 55.0%
! CAGAGTGAGGGTGCATTCCA+AGG + chr7_2:79077925-79077944 None:intergenic 55.0%
GAGGCAGGCCAATCAGGCAA+AGG + chr7_2:79076881-79076900 None:intergenic 60.0%
AATGGGGAGGCAGGCCAATC+AGG + chr7_2:79076887-79076906 None:intergenic 60.0%
!! TGATTGGCCTGCCTCCCCAT+TGG - chr7_2:79076886-79076905 Msa1079870:intron 60.0%
! GGTCTGGTTCAGGGCATGGT+GGG + chr7_2:79077898-79077917 None:intergenic 60.0%
! AGGTCTGGTTCAGGGCATGG+TGG + chr7_2:79077899-79077918 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 79075030 79078867 79075030 ID=Msa1079870;Name=Msa1079870
chr7_2 mRNA 79075030 79078867 79075030 ID=Msa1079870-mRNA-1;Parent=Msa1079870;Name=Msa1079870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=75|1|1|1|0.75|0.6|5|67|380
chr7_2 exon 79075030 79075348 79075030 ID=Msa1079870-mRNA-1:exon:19797;Parent=Msa1079870-mRNA-1
chr7_2 exon 79075825 79076188 79075825 ID=Msa1079870-mRNA-1:exon:19796;Parent=Msa1079870-mRNA-1
chr7_2 exon 79076982 79077217 79076982 ID=Msa1079870-mRNA-1:exon:19795;Parent=Msa1079870-mRNA-1
chr7_2 exon 79078159 79078456 79078159 ID=Msa1079870-mRNA-1:exon:19794;Parent=Msa1079870-mRNA-1
chr7_2 exon 79078800 79078867 79078800 ID=Msa1079870-mRNA-1:exon:19793;Parent=Msa1079870-mRNA-1
chr7_2 five_prime_UTR 79078800 79078867 79078800 ID=Msa1079870-mRNA-1:five_prime_utr;Parent=Msa1079870-mRNA-1
chr7_2 five_prime_UTR 79078450 79078456 79078450 ID=Msa1079870-mRNA-1:five_prime_utr;Parent=Msa1079870-mRNA-1
chr7_2 CDS 79078159 79078449 79078159 ID=Msa1079870-mRNA-1:cds;Parent=Msa1079870-mRNA-1
chr7_2 CDS 79076982 79077217 79076982 ID=Msa1079870-mRNA-1:cds;Parent=Msa1079870-mRNA-1
chr7_2 CDS 79075825 79076188 79075825 ID=Msa1079870-mRNA-1:cds;Parent=Msa1079870-mRNA-1
chr7_2 CDS 79075097 79075348 79075097 ID=Msa1079870-mRNA-1:cds;Parent=Msa1079870-mRNA-1
chr7_2 three_prime_UTR 79075030 79075096 79075030 ID=Msa1079870-mRNA-1:three_prime_utr;Parent=Msa1079870-mRNA-1
Gene Sequence

>Msa1079870

ATGTCTCCTGCAATGGCAATGAATGATGAAAAGAATGAGGATTGTCATACAATAGAAAATGAATATCATAAAGGAGTGAAGCATTTGTATGAGAAAGGTTATCTTCATAAGGTACCAAAGAAGTATATGTTTCCAGCTTCGGAAAGACCCACAAAGAGTATGGATGATTCAAATGTTGCTAAGGAAAATCTTCAGCTACCCATAATTGATTTCACTGATCTTATTGGTCCAAATAGGCTACAAGCTCTTGAGTCTCTAGCCAATGCTTGTGAACAATATGGATTTTTCCAGCTAGTAAATCACAACATATCAGATGATATAACAAGGAGCATCATAGATGTTGTAGGAAGATTCTTCGATCTTCCATTGGAGGAGAGAGCTAAGTATATGACAAGTGATATGAGAGCAGCTGTGAGATATGGGACCAGTTTCAGTCAAACAAAAGACTCAGTGTTCTGTTGGAGGGATTTCTTGAAACTCATTTGTAATCCTTTGCCTGATTGGCCTGCCTCCCCATTGGACTTTCAGGAAGTGGTGGCCAGCTATGCAGAAGAAACCAAACATTTGTTCTTGACAATAATGGAAGCCATCCTAGAAAGTTTAGGGATTATGGAAGCCAACCAAGAAGAGGAGGCCAAAGAAAATGACAACAACAATAATAATATTATGAAAGAATTGGACAATGGGAGCCAGATGTTGGTAACCAATTTTTACCCACCATGCCCTGAACCAGACCTAACCCTTGGAATGCACCCTCACTCTGATTATGGCTTCCTCACACTTCTCCTCCAAGATGAAGTAGAGGGTTTGCAAATCCAATATCAAGACAAATGGCTTACTGTTCAACCTATTCCCAATGCTTTCGTTGTCAATATTGGTGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTATTACATAGGGTTCTGGTGAATGAAGCTAAGAGCAGAGTATCAGTGGCTTCTCTGCATAGCCTTCCTTTTGACTGCACTGTGAGACCGTCACCAAAACTCATTGATGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGCTAGCTTTCTTGCGTATGTGTCCACAAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCCAGAAAATTAACATACACATAA
Protein sequence

>Msa1079870

MSPAMAMNDEKNEDCHTIENEYHKGVKHLYEKGYLHKVPKKYMFPASERPTKSMDDSNVAKENLQLPIIDFTDLIGPNRLQALESLANACEQYGFFQLVNHNISDDITRSIIDVVGRFFDLPLEERAKYMTSDMRAAVRYGTSFSQTKDSVFCWRDFLKLICNPLPDWPASPLDFQEVVASYAEETKHLFLTIMEAILESLGIMEANQEEEAKENDNNNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQYQDKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVLVNEAKSRVSVASLHSLPFDCTVRPSPKLIDEENPKRYMDTDFASFLAYVSTRETKKKDFLESRKLTYT*