Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566940 | XP_013446743.1 | 96.506 | 601 | 21 | 0 | 1 | 601 | 1 | 601 | 0.0 | 1202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566940 | sp|F4HVG8|CSK_ARATH | 61.090 | 532 | 181 | 9 | 68 | 593 | 88 | 599 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566940 | A0A072U4L7 | 96.506 | 601 | 21 | 0 | 1 | 601 | 1 | 601 | 0.0 | 1202 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0566940 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0029520 | Msa0566940 | 0.812316 | 4.508395e-51 | -8.615850e-47 |
| Msa0063940 | Msa0566940 | -0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa0066890 | Msa0566940 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0067590 | Msa0566940 | 0.817971 | 2.500517e-52 | -8.615850e-47 |
| Msa0093950 | Msa0566940 | 0.808915 | 2.449026e-50 | -8.615850e-47 |
| Msa0098240 | Msa0566940 | -0.831080 | 2.043841e-55 | -8.615850e-47 |
| Msa0112880 | Msa0566940 | 0.801865 | 7.360292e-49 | -8.615850e-47 |
| Msa0133140 | Msa0566940 | 0.830536 | 2.778555e-55 | -8.615850e-47 |
| Msa0136870 | Msa0566940 | 0.834910 | 2.279936e-56 | -8.615850e-47 |
| Msa0140770 | Msa0566940 | 0.832170 | 1.101432e-55 | -8.615850e-47 |
| Msa0154880 | Msa0566940 | 0.808039 | 3.767607e-50 | -8.615850e-47 |
| Msa0173600 | Msa0566940 | 0.812333 | 4.468606e-51 | -8.615850e-47 |
| Msa0173950 | Msa0566940 | 0.807978 | 3.880893e-50 | -8.615850e-47 |
| Msa0178840 | Msa0566940 | 0.806927 | 6.486614e-50 | -8.615850e-47 |
| Msa0183310 | Msa0566940 | 0.835652 | 1.481178e-56 | -8.615850e-47 |
| Msa0187590 | Msa0566940 | 0.815102 | 1.098102e-51 | -8.615850e-47 |
| Msa0202490 | Msa0566940 | -0.807798 | 4.238718e-50 | -8.615850e-47 |
| Msa0206040 | Msa0566940 | 0.807680 | 4.491492e-50 | -8.615850e-47 |
| Msa0219280 | Msa0566940 | -0.820173 | 7.888610e-53 | -8.615850e-47 |
| Msa0220400 | Msa0566940 | 0.818773 | 1.645524e-52 | -8.615850e-47 |
| Msa0234410 | Msa0566940 | 0.824539 | 7.643571e-54 | -8.615850e-47 |
| Msa0373120 | Msa0566940 | 0.820828 | 5.579377e-53 | -8.615850e-47 |
| Msa0377820 | Msa0566940 | -0.801901 | 7.234242e-49 | -8.615850e-47 |
| Msa0384590 | Msa0566940 | -0.823733 | 1.181587e-53 | -8.615850e-47 |
| Msa0385930 | Msa0566940 | 0.849559 | 2.991647e-60 | -8.615850e-47 |
| Msa0415160 | Msa0566940 | 0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0421220 | Msa0566940 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0434660 | Msa0566940 | -0.816750 | 4.708485e-52 | -8.615850e-47 |
| Msa0435130 | Msa0566940 | 0.827374 | 1.620897e-54 | -8.615850e-47 |
| Msa0472930 | Msa0566940 | -0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0479760 | Msa0566940 | 0.838672 | 2.501695e-57 | -8.615850e-47 |
| Msa0256140 | Msa0566940 | -0.808144 | 3.577166e-50 | -8.615850e-47 |
| Msa0355080 | Msa0566940 | 0.839122 | 1.913983e-57 | -8.615850e-47 |
| Msa0500610 | Msa0566940 | 0.820639 | 6.166079e-53 | -8.615850e-47 |
| Msa0500700 | Msa0566940 | 0.827088 | 1.897704e-54 | -8.615850e-47 |
| Msa0522540 | Msa0566940 | -0.821911 | 3.138553e-53 | -8.615850e-47 |
| Msa0523420 | Msa0566940 | 0.816993 | 4.151475e-52 | -8.615850e-47 |
| Msa0523430 | Msa0566940 | 0.847296 | 1.265126e-59 | -8.615850e-47 |
| Msa0523490 | Msa0566940 | 0.823383 | 1.427039e-53 | -8.615850e-47 |
| Msa0548410 | Msa0566940 | -0.800775 | 1.230109e-48 | -8.615850e-47 |
| Msa0549950 | Msa0566940 | -0.814750 | 1.314153e-51 | -8.615850e-47 |
| Msa0566940 | Msa0576020 | 0.807726 | 4.390266e-50 | -8.615850e-47 |
| Msa0566940 | Msa0576080 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
| Msa0566940 | Msa0576090 | 0.809317 | 2.008761e-50 | -8.615850e-47 |
| Msa0566940 | Msa0576120 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0566940 | Msa0577690 | -0.822684 | 2.076986e-53 | -8.615850e-47 |
| Msa0566940 | Msa0579080 | -0.823908 | 1.075210e-53 | -8.615850e-47 |
| Msa0566940 | Msa0579160 | -0.831292 | 1.813224e-55 | -8.615850e-47 |
| Msa0566940 | Msa0579220 | -0.831487 | 1.623362e-55 | -8.615850e-47 |
| Msa0566940 | Msa0590620 | 0.824240 | 8.983551e-54 | -8.615850e-47 |
| Msa0566940 | Msa0610240 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0566940 | Msa0610690 | -0.824376 | 8.345895e-54 | -8.615850e-47 |
| Msa0566940 | Msa0626920 | -0.808468 | 3.051246e-50 | -8.615850e-47 |
| Msa0566940 | Msa0637930 | 0.867331 | 1.480413e-65 | -8.615850e-47 |
| Msa0566940 | Msa0638010 | 0.808098 | 3.659849e-50 | -8.615850e-47 |
| Msa0566940 | Msa0646020 | -0.809311 | 2.014269e-50 | -8.615850e-47 |
| Msa0566940 | Msa0646420 | -0.813225 | 2.850641e-51 | -8.615850e-47 |
| Msa0566940 | Msa0651870 | -0.810875 | 9.273581e-51 | -8.615850e-47 |
| Msa0566940 | Msa0651890 | -0.808521 | 2.973320e-50 | -8.615850e-47 |
| Msa0566940 | Msa0662220 | -0.819531 | 1.105780e-52 | -8.615850e-47 |
| Msa0566940 | Msa0686950 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
| Msa0566940 | Msa0703430 | 0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0566940 | Msa0712860 | -0.832852 | 7.460012e-56 | -8.615850e-47 |
| Msa0566940 | Msa0742370 | 0.871014 | 9.434223e-67 | -8.615850e-47 |
| Msa0566940 | Msa0752490 | 0.826401 | 2.767653e-54 | -8.615850e-47 |
| Msa0566940 | Msa0779450 | 0.861594 | 9.190492e-64 | -8.615850e-47 |
| Msa0566940 | Msa0800480 | -0.840863 | 6.731024e-58 | -8.615850e-47 |
| Msa0566940 | Msa0823480 | 0.840400 | 8.894532e-58 | -8.615850e-47 |
| Msa0566940 | Msa0827520 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0566940 | Msa0862480 | 0.874476 | 6.554813e-68 | -8.615850e-47 |
| Msa0566940 | Msa0866060 | 0.803739 | 3.019453e-49 | -8.615850e-47 |
| Msa0566940 | Msa0964020 | -0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0566940 | Msa0969590 | -0.800490 | 1.406656e-48 | -8.615850e-47 |
| Msa0566940 | Msa0993190 | -0.804303 | 2.304272e-49 | -8.615850e-47 |
| Msa0566940 | Msa1002970 | 0.813099 | 3.037963e-51 | -8.615850e-47 |
| Msa0566940 | Msa1004410 | 0.824103 | 9.675897e-54 | -8.615850e-47 |
| Msa0566940 | Msa1032470 | -0.848556 | 5.686022e-60 | -8.615850e-47 |
| Msa0566940 | Msa1039440 | 0.858763 | 6.588027e-63 | -8.615850e-47 |
| Msa0566940 | Msa1083620 | 0.819487 | 1.131852e-52 | -8.615850e-47 |
| Msa0566940 | Msa1085610 | 0.816875 | 4.413502e-52 | -8.615850e-47 |
| Msa0566940 | Msa1088400 | 0.857728 | 1.339385e-62 | -8.615850e-47 |
| Msa0566940 | Msa1128520 | 0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0566940 | Msa1128610 | 0.849533 | 3.042901e-60 | -8.615850e-47 |
| Msa0566940 | Msa1129300 | 0.820687 | 6.011922e-53 | -8.615850e-47 |
| Msa0566940 | Msa1132900 | 0.811225 | 7.787158e-51 | -8.615850e-47 |
| Msa0566940 | Msa1143810 | 0.812149 | 4.901186e-51 | -8.615850e-47 |
| Msa0566940 | Msa1190100 | 0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0566940 | Msa1197720 | -0.827276 | 1.710348e-54 | -8.615850e-47 |
| Msa0566940 | Msa1207920 | 0.841457 | 4.697197e-58 | -8.615850e-47 |
| Msa0566940 | Msa1251410 | -0.849834 | 2.507499e-60 | -8.615850e-47 |
| Msa0566940 | Msa1258030 | 0.872038 | 4.322248e-67 | -8.615850e-47 |
| Msa0566940 | Msa1260220 | -0.821403 | 4.113999e-53 | -8.615850e-47 |
| Msa0566940 | Msa1277260 | -0.812105 | 5.010887e-51 | -8.615850e-47 |
| Msa0566940 | Msa1315890 | -0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0566940 | Msa1331570 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0566940 | Msa1333220 | 0.809749 | 1.622407e-50 | -8.615850e-47 |
| Msa0566940 | Msa1342960 | 0.847578 | 1.058352e-59 | -8.615850e-47 |
| Msa0566940 | Msa1351990 | -0.802739 | 4.861959e-49 | -8.615850e-47 |
| Msa0566940 | Msa1352600 | 0.840494 | 8.409068e-58 | -8.615850e-47 |
| Msa0566940 | Msa1361670 | 0.854758 | 9.942942e-62 | -8.615850e-47 |
| Msa0566940 | Msa1364350 | 0.856236 | 3.688689e-62 | -8.615850e-47 |
| Msa0566940 | Msa1372770 | 0.801848 | 7.417499e-49 | -8.615850e-47 |
| Msa0566940 | Msa1375970 | 0.821583 | 3.738270e-53 | -8.615850e-47 |
| Msa0566940 | Msa1381340 | 0.800469 | 1.420217e-48 | -8.615850e-47 |
| Msa0566940 | Msa1383630 | -0.800589 | 1.342454e-48 | -8.615850e-47 |
| Msa0566940 | Msa1428230 | 0.836400 | 9.566511e-57 | -8.615850e-47 |
| Msa0566940 | Msa1431510 | 0.843914 | 1.044987e-58 | -8.615850e-47 |
| Msa0566940 | Msa1452230 | 0.815326 | 9.791148e-52 | -8.615850e-47 |
| Msa0566940 | Msa1457390 | 0.827669 | 1.377332e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566940 | MtrunA17_Chr8g0381591 | 96.506 | 601 | 21 | 0 | 1 | 601 | 1 | 601 | 0.0 | 1202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566940 | AT1G67840.1 | 61.090 | 532 | 181 | 9 | 68 | 593 | 88 | 599 | 0.0 | 636 |
| Msa0566940 | AT1G67840.2 | 54.301 | 372 | 144 | 9 | 68 | 433 | 88 | 439 | 2.60e-123 | 372 |
Find 183 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTTGTTGTTGGCTTCT+TGG | 0.133045 | 4_1:+68179171 | Msa0566940:CDS |
| AGCTCCAAGTGGAGCATCTT+TGG | 0.305623 | 4_1:-68182310 | None:intergenic |
| GACTATTGCCCGGGAGATAC+TGG | 0.314615 | 4_1:+68182248 | Msa0566940:CDS |
| TGACATTGTTGAGGATATAT+TGG | 0.319347 | 4_1:+68180270 | Msa0566940:CDS |
| GGAGGAGAGGGTGAGGGTGG+TGG | 0.328913 | 4_1:-68177771 | None:intergenic |
| TCGTCATCGGAATCGGAGTT+AGG | 0.331639 | 4_1:-68177734 | None:intergenic |
| GGGTTGAATAATCATGTATC+TGG | 0.332304 | 4_1:+68179247 | Msa0566940:CDS |
| GGAGTTAGGGTTAGCGTTGA+TGG | 0.333860 | 4_1:-68177720 | None:intergenic |
| GTTACCATATAGTGCATATC+AGG | 0.354489 | 4_1:-68181546 | None:intergenic |
| CGTTCCCGAATCGTTCTTAT+CGG | 0.360871 | 4_1:+68177946 | Msa0566940:CDS |
| GTTAATAAAATGCATAAATC+TGG | 0.375057 | 4_1:+68180910 | Msa0566940:CDS |
| GTTAAACATCCCTTTGTTGT+TGG | 0.376078 | 4_1:+68179163 | Msa0566940:CDS |
| TCTGGCTATGGCATATGTTA+TGG | 0.382761 | 4_1:+68179414 | Msa0566940:CDS |
| CTTGGTTGCTGAGCTTCCAT+TGG | 0.384197 | 4_1:+68179189 | Msa0566940:CDS |
| AGAACTACAGCTTTACATTC+AGG | 0.395217 | 4_1:-68179133 | None:intergenic |
| TTCTCTTAGTGCTGCTGCCC+AGG | 0.398572 | 4_1:+68180942 | Msa0566940:CDS |
| CGCGGGTGGAGGAGAGGGTG+AGG | 0.401310 | 4_1:-68177778 | None:intergenic |
| CTGAAAGCCTGGCGCAGAGC+AGG | 0.408438 | 4_1:-68181414 | None:intergenic |
| GAGGCAGAGTCGATGGAAAT+CGG | 0.411945 | 4_1:-68177897 | None:intergenic |
| TGAGCAACACACCTGCATTT+CGG | 0.414216 | 4_1:-68178212 | None:intergenic |
| ATGACGTGGAACTTTGTTGC+TGG | 0.415315 | 4_1:+68182222 | Msa0566940:CDS |
| AGAACTCTTGGCTGAAGATA+TGG | 0.415896 | 4_1:+68182188 | Msa0566940:CDS |
| TTCGAAAGAGATGAAGTTGT+TGG | 0.418103 | 4_1:-68177919 | None:intergenic |
| CAAGTGGAGCATCTTTGGTC+CGG | 0.421288 | 4_1:-68182305 | None:intergenic |
| TAATGTCAGGATGAATAATC+TGG | 0.421755 | 4_1:+68179864 | Msa0566940:CDS |
| CTCCACTACGACATGGAATC+AGG | 0.422052 | 4_1:+68180998 | Msa0566940:CDS |
| TTGAAGAGAGTAGAAGCATT+TGG | 0.423142 | 4_1:-68177634 | None:intergenic |
| TAGTTATGTGATGGATCAAC+TGG | 0.423265 | 4_1:+68178069 | Msa0566940:CDS |
| GGAGGCGAGTGCGCGGGTGG+AGG | 0.425603 | 4_1:-68177789 | None:intergenic |
| GAAGGGGCATCTCTATATCC+TGG | 0.426176 | 4_1:-68180960 | None:intergenic |
| CATTTCGGAAAGTGCGGTCT+CGG | 0.430041 | 4_1:-68178197 | None:intergenic |
| TATGGCATATGTTATGGATC+AGG | 0.432013 | 4_1:+68179420 | Msa0566940:CDS |
| GGTTGCTGAGCTTCCATTGG+TGG | 0.432492 | 4_1:+68179192 | Msa0566940:CDS |
| ATGCAATGTTTCTGAAGTAT+TGG | 0.436879 | 4_1:+68181293 | Msa0566940:CDS |
| ACCAAGAAGCCAACAACAAA+GGG | 0.436980 | 4_1:-68179172 | None:intergenic |
| AAAGATGCTCCACTTGGAGC+TGG | 0.439507 | 4_1:+68182312 | Msa0566940:CDS |
| AAGTGGAGCATCTTTGGTCC+GGG | 0.440131 | 4_1:-68182304 | None:intergenic |
| TGTTGACATTTCACAGTCTC+TGG | 0.441936 | 4_1:+68179396 | Msa0566940:CDS |
| TGGACCTGATATGCACTATA+TGG | 0.442505 | 4_1:+68181542 | Msa0566940:CDS |
| CGTTGAGATTTGAAGGTAAG+TGG | 0.443076 | 4_1:-68177668 | None:intergenic |
| ATACAGCATCCTGGAGTTGT+TGG | 0.443402 | 4_1:-68180321 | None:intergenic |
| GGTGGAGGAGAGGGTGAGGG+TGG | 0.448628 | 4_1:-68177774 | None:intergenic |
| GGTTAGCGTTGATGGTTTGA+AGG | 0.451992 | 4_1:-68177712 | None:intergenic |
| GCTTTCAGCAACCTTATTGA+AGG | 0.452369 | 4_1:+68181429 | Msa0566940:CDS |
| GGAGTAAAGCACCTTCAATA+AGG | 0.452645 | 4_1:-68181440 | None:intergenic |
| CCGGTGATCGTCATCGGAAT+CGG | 0.453030 | 4_1:-68177741 | None:intergenic |
| CATGGGAAATTCAGACTCTT+CGG | 0.458256 | 4_1:+68179317 | Msa0566940:CDS |
| CAATAAGGTTGCTGAAAGCC+TGG | 0.458375 | 4_1:-68181425 | None:intergenic |
| TGAGGGTGGTGGAATTGTTC+CGG | 0.459416 | 4_1:-68177760 | None:intergenic |
| CTTTCAAGCATTCAAACCTT+GGG | 0.461316 | 4_1:+68179988 | Msa0566940:CDS |
| CCGTCTAGAATAAGATTGTA+TGG | 0.468806 | 4_1:+68182467 | Msa0566940:three_prime_UTR |
| CCTTTCCTCCAACATGTGTT+CGG | 0.472155 | 4_1:-68181461 | None:intergenic |
| GAGTGCGCGGGTGGAGGAGA+GGG | 0.475562 | 4_1:-68177783 | None:intergenic |
| TCTGACTCAGCATCTCCTCC+AGG | 0.476951 | 4_1:-68178115 | None:intergenic |
| CTCGTACTTATTGATGATGA+TGG | 0.476992 | 4_1:+68181522 | Msa0566940:CDS |
| GGCGGAGGCGAGTGCGCGGG+TGG | 0.478007 | 4_1:-68177792 | None:intergenic |
| GATATATAGAATGAGTTTGA+AGG | 0.478153 | 4_1:+68182381 | Msa0566940:exon |
| ACTTTCAAGCATTCAAACCT+TGG | 0.479091 | 4_1:+68179987 | Msa0566940:CDS |
| GCGGCATCGTTGAGATTTGA+AGG | 0.481008 | 4_1:-68177675 | None:intergenic |
| GGGGAACTCGTGTAGAACTT+TGG | 0.482111 | 4_1:+68182334 | Msa0566940:CDS |
| AAGATGCTCCACTTGGAGCT+GGG | 0.482234 | 4_1:+68182313 | Msa0566940:CDS |
| TGCTGGGCTGACTATTGCCC+GGG | 0.486262 | 4_1:+68182239 | Msa0566940:CDS |
| CGAACCGATAAGAACGATTC+GGG | 0.486961 | 4_1:-68177950 | None:intergenic |
| TTCTGAAGTATTGGCAGACT+TGG | 0.488198 | 4_1:+68181302 | Msa0566940:CDS |
| CGGGAGATACTGGAGAGTTA+TGG | 0.488539 | 4_1:+68182258 | Msa0566940:CDS |
| CGTCATCGGAATCGGAGTTA+GGG | 0.488788 | 4_1:-68177733 | None:intergenic |
| TTGCTGGGCTGACTATTGCC+CGG | 0.489104 | 4_1:+68182238 | Msa0566940:CDS |
| ACGAACCGATAAGAACGATT+CGG | 0.493218 | 4_1:-68177951 | None:intergenic |
| TAGACGGTTTCTCAACTCTC+AGG | 0.497089 | 4_1:-68182451 | None:intergenic |
| AGTCGCTGAGTGAACTCGAC+GGG | 0.498448 | 4_1:-68177836 | None:intergenic |
| AATTCAGACTCTTCGGATCA+AGG | 0.498498 | 4_1:+68179324 | Msa0566940:CDS |
| AAATCAATCAAGAAAATGAA+TGG | 0.502569 | 4_1:+68180820 | Msa0566940:CDS |
| CATTTCACAGTCTCTGGCTA+TGG | 0.502587 | 4_1:+68179402 | Msa0566940:CDS |
| CGTAGTGGAGCGAGAGCTAA+AGG | 0.502814 | 4_1:-68180985 | None:intergenic |
| AGGCAGAGTCGATGGAAATC+GGG | 0.503639 | 4_1:-68177896 | None:intergenic |
| GTGAAGTTGCACATACCAAC+CGG | 0.505078 | 4_1:-68179352 | None:intergenic |
| CAACATGGCAAAATAATGTC+AGG | 0.505416 | 4_1:+68179851 | Msa0566940:CDS |
| AGTCGATGGAAATCGGGACT+AGG | 0.507935 | 4_1:-68177890 | None:intergenic |
| CGGAGGGTTGCAGTGTACCC+TGG | 0.509145 | 4_1:+68178097 | Msa0566940:CDS |
| TCAGATTTAACAACTGCCAT+TGG | 0.509352 | 4_1:-68182360 | None:intergenic |
| CGAGTGCGCGGGTGGAGGAG+AGG | 0.509761 | 4_1:-68177784 | None:intergenic |
| TGATGTTCTCCAACAACTCC+AGG | 0.510841 | 4_1:+68180312 | Msa0566940:CDS |
| ACCATACGGACAAGAACTCT+TGG | 0.514444 | 4_1:+68182176 | Msa0566940:CDS |
| ATTGTTCCGGTGATCGTCAT+CGG | 0.516068 | 4_1:-68177747 | None:intergenic |
| GCCAAGAGTTCTTGTCCGTA+TGG | 0.518420 | 4_1:-68182177 | None:intergenic |
| AGAAGAACCTGCTCTGCGCC+AGG | 0.520287 | 4_1:+68181407 | Msa0566940:CDS |
| CGGACCAAAGATGCTCCACT+TGG | 0.520699 | 4_1:+68182306 | Msa0566940:CDS |
| ATGGTTTGAAGGAAACAAGA+AGG | 0.523393 | 4_1:-68177701 | None:intergenic |
| TTATTAACAGAGCCATCCCT+TGG | 0.525157 | 4_1:-68180895 | None:intergenic |
| AGTACGAGGGTGCCACCAGC+TGG | 0.526696 | 4_1:-68181507 | None:intergenic |
| TGGATTTGGATAAGAAGTCA+TGG | 0.530715 | 4_1:+68179299 | Msa0566940:CDS |
| AAGGTTTGAATGCTTGAAAG+TGG | 0.533582 | 4_1:-68179985 | None:intergenic |
| TGACGTGGAACTTTGTTGCT+GGG | 0.538505 | 4_1:+68182223 | Msa0566940:CDS |
| ATGTATTACATCATATAGAA+AGG | 0.538538 | 4_1:+68182613 | Msa0566940:three_prime_UTR |
| GTGTCTACTTCTGCACCAGC+TGG | 0.540665 | 4_1:+68181492 | Msa0566940:CDS |
| GACCGCACTTTCCGAAATGC+AGG | 0.541061 | 4_1:+68178201 | Msa0566940:CDS |
| GAATGGCGGAGGCGAGTGCG+CGG | 0.543708 | 4_1:-68177796 | None:intergenic |
| TTACAAACTAATATACAGAC+TGG | 0.544721 | 4_1:-68182534 | None:intergenic |
| GCTTTACTCCGAACACATGT+TGG | 0.544894 | 4_1:+68181453 | Msa0566940:CDS |
| TTAGTTACGTTAACGAGAGA+AGG | 0.546129 | 4_1:-68177574 | None:intergenic |
| GTTGTTGGAGGCAGAGTCGA+TGG | 0.546582 | 4_1:-68177904 | None:intergenic |
| GAAGGAAACAAGAAGGGTTG+CGG | 0.547746 | 4_1:-68177694 | None:intergenic |
| CATAACTCTCCAGTATCTCC+CGG | 0.547762 | 4_1:-68182257 | None:intergenic |
| GGATTTGGATAAGAAGTCAT+GGG | 0.548844 | 4_1:+68179300 | Msa0566940:CDS |
| AACAGCATTTGATCTTTGAT+CGG | 0.550290 | 4_1:-68179377 | None:intergenic |
| GATGCTGAGTCAGACGAAGA+AGG | 0.554252 | 4_1:+68178124 | Msa0566940:CDS |
| CCGATTCCGATGACGATCAC+CGG | 0.554284 | 4_1:+68177741 | Msa0566940:CDS |
| GGTTGAATAATCATGTATCT+GGG | 0.555450 | 4_1:+68179248 | Msa0566940:CDS |
| AATGGCGGAGGCGAGTGCGC+GGG | 0.556940 | 4_1:-68177795 | None:intergenic |
| TACGTTAACGAGAGAAGGAA+AGG | 0.558657 | 4_1:-68177569 | None:intergenic |
| AGATGCTCCACTTGGAGCTG+GGG | 0.559112 | 4_1:+68182314 | Msa0566940:CDS |
| TGGATCAACTGGAGCTGCGG+AGG | 0.559128 | 4_1:+68178080 | Msa0566940:CDS |
| AACTCTCAGGTGCTGTGAGG+CGG | 0.559663 | 4_1:-68182438 | None:intergenic |
| TCTTCGGATCAAGGATGAGC+CGG | 0.561219 | 4_1:+68179333 | Msa0566940:CDS |
| TTACTCCGAACACATGTTGG+AGG | 0.561301 | 4_1:+68181456 | Msa0566940:CDS |
| CCATACAATCTTATTCTAGA+CGG | 0.561875 | 4_1:-68182467 | None:intergenic |
| TGTAGAACTTTGGCTTCCAA+TGG | 0.561959 | 4_1:+68182344 | Msa0566940:CDS |
| TTGTCAAATATACAGCATCC+TGG | 0.564184 | 4_1:-68180330 | None:intergenic |
| GAGCGAGAGCTAAAGGTGGA+AGG | 0.564292 | 4_1:-68180978 | None:intergenic |
| GCGGGTGGAGGAGAGGGTGA+GGG | 0.565308 | 4_1:-68177777 | None:intergenic |
| TGGTTTGAAGGAAACAAGAA+GGG | 0.568078 | 4_1:-68177700 | None:intergenic |
| TAAAGCTGTAGTTCTTCCCA+TGG | 0.568418 | 4_1:+68179141 | Msa0566940:CDS |
| AACCAAGAAGCCAACAACAA+AGG | 0.570684 | 4_1:-68179173 | None:intergenic |
| TGTGCAGGTGTACGTTAGAC+CGG | 0.572492 | 4_1:+68178042 | Msa0566940:intron |
| GAAAGAGATGAAGTTGTTGG+AGG | 0.572888 | 4_1:-68177916 | None:intergenic |
| AGCGAGAGCTAAAGGTGGAA+GGG | 0.573231 | 4_1:-68180977 | None:intergenic |
| ACCGGCAGGTAGTTATGTGA+TGG | 0.574372 | 4_1:+68178060 | Msa0566940:CDS |
| TCGGCAGATCGCAATCCGGC+GGG | 0.574420 | 4_1:-68178178 | None:intergenic |
| GTTGAGGATATATTGGCGCT+AGG | 0.574782 | 4_1:+68180277 | Msa0566940:CDS |
| GCGAGAGCTAAAGGTGGAAG+GGG | 0.575580 | 4_1:-68180976 | None:intergenic |
| CAGGTGTACGTTAGACCGGC+AGG | 0.576544 | 4_1:+68178046 | Msa0566940:intron |
| CTCGGCAGATCGCAATCCGG+CGG | 0.579636 | 4_1:-68178179 | None:intergenic |
| ATGCATTCACTCACACCATA+CGG | 0.579978 | 4_1:+68182162 | Msa0566940:CDS |
| TTAGATAGTTCTCCAAGGGA+TGG | 0.580202 | 4_1:+68180883 | Msa0566940:CDS |
| GCAGCAGCACTAAGAGAAAG+TGG | 0.582809 | 4_1:-68180937 | None:intergenic |
| GTTGAGATTTGAAGGTAAGT+GGG | 0.587743 | 4_1:-68177667 | None:intergenic |
| GGTCTCGGCAGATCGCAATC+CGG | 0.588364 | 4_1:-68178182 | None:intergenic |
| ATTGTTAGATAGTTCTCCAA+GGG | 0.588526 | 4_1:+68180879 | Msa0566940:CDS |
| GATTTCATATGACATTGTTG+AGG | 0.588742 | 4_1:+68180261 | Msa0566940:intron |
| TCTACTTCTGCACCAGCTGG+TGG | 0.590389 | 4_1:+68181495 | Msa0566940:CDS |
| GATGCTCCACTTGGAGCTGG+GGG | 0.590416 | 4_1:+68182315 | Msa0566940:CDS |
| TCCATCACATAACTACCTGC+CGG | 0.592041 | 4_1:-68178061 | None:intergenic |
| AAGGGGCATCTCTATATCCT+GGG | 0.593040 | 4_1:-68180959 | None:intergenic |
| TGTGTGAAGGGTCAAAGTGA+TGG | 0.593563 | 4_1:+68179226 | Msa0566940:CDS |
| CCGAACACATGTTGGAGGAA+AGG | 0.593615 | 4_1:+68181461 | Msa0566940:CDS |
| GAGCTCGAAACTTGTGTGAA+GGG | 0.594588 | 4_1:+68179214 | Msa0566940:CDS |
| ACAAAGGGATGTTTAACCAT+GGG | 0.598210 | 4_1:-68179157 | None:intergenic |
| CAAGTTTCGAGCTCCACCAA+TGG | 0.598526 | 4_1:-68179205 | None:intergenic |
| GAATAATCATGTATCTGGGA+AGG | 0.600583 | 4_1:+68179252 | Msa0566940:CDS |
| GGAGACTTTACGAATGGCGG+AGG | 0.601002 | 4_1:-68177807 | None:intergenic |
| ATAACTCTCCAGTATCTCCC+GGG | 0.614715 | 4_1:-68182256 | None:intergenic |
| AACAAAGGGATGTTTAACCA+TGG | 0.615358 | 4_1:-68179158 | None:intergenic |
| TCTTCTACAGCAGCTAGCAA+AGG | 0.616929 | 4_1:-68181390 | None:intergenic |
| CTGACTCAGCATCTCCTCCA+GGG | 0.627098 | 4_1:-68178114 | None:intergenic |
| CGGATCAAGGATGAGCCGGT+TGG | 0.628083 | 4_1:+68179337 | Msa0566940:CDS |
| GTGTGAAGGGTCAAAGTGAT+GGG | 0.633671 | 4_1:+68179227 | Msa0566940:CDS |
| AATTGTTAGATAGTTCTCCA+AGG | 0.634239 | 4_1:+68180878 | Msa0566940:CDS |
| AATACTTCAGAAACATTGCA+TGG | 0.636997 | 4_1:-68181291 | None:intergenic |
| GGATCAACTGGAGCTGCGGA+GGG | 0.640471 | 4_1:+68178081 | Msa0566940:CDS |
| GGAGCTCGAAACTTGTGTGA+AGG | 0.642867 | 4_1:+68179213 | Msa0566940:CDS |
| GAGTCGCTGAGTGAACTCGA+CGG | 0.644857 | 4_1:-68177837 | None:intergenic |
| CTCAACTCTCAGGTGCTGTG+AGG | 0.647890 | 4_1:-68182441 | None:intergenic |
| AGTGGAGCATCTTTGGTCCG+GGG | 0.648290 | 4_1:-68182303 | None:intergenic |
| CATCATCATCAATAAGTACG+AGG | 0.649335 | 4_1:-68181521 | None:intergenic |
| CACCTGCATTTCGGAAAGTG+CGG | 0.653202 | 4_1:-68178203 | None:intergenic |
| GCTCTCGCTCCACTACGACA+TGG | 0.656196 | 4_1:+68180991 | Msa0566940:CDS |
| TACCTGATTCCATGTCGTAG+TGG | 0.661231 | 4_1:-68181000 | None:intergenic |
| ATCATCATCAATAAGTACGA+GGG | 0.670541 | 4_1:-68181520 | None:intergenic |
| GGTGGAGACTTTACGAATGG+CGG | 0.670767 | 4_1:-68177810 | None:intergenic |
| GGATGCTGTATATTTGACAA+AGG | 0.675769 | 4_1:+68180333 | Msa0566940:CDS |
| GGAGGTGGAGACTTTACGAA+TGG | 0.676470 | 4_1:-68177813 | None:intergenic |
| GTCGCTGAGTGAACTCGACG+GGG | 0.676595 | 4_1:-68177835 | None:intergenic |
| AGTGGAGCGAGAGCTAAAGG+TGG | 0.679241 | 4_1:-68180982 | None:intergenic |
| ACATCATATAGAAAGGCGTG+TGG | 0.681360 | 4_1:+68182620 | Msa0566940:three_prime_UTR |
| TGTTACTTCAGCAATCAACA+TGG | 0.683428 | 4_1:+68179836 | Msa0566940:CDS |
| TGATGGATCAACTGGAGCTG+CGG | 0.683645 | 4_1:+68178077 | Msa0566940:CDS |
| TCGCTGAGTGAACTCGACGG+GGG | 0.697652 | 4_1:-68177834 | None:intergenic |
| TCAAACACAAACCAGATCCG+CGG | 0.708138 | 4_1:+68179961 | Msa0566940:intron |
| AGGGTTGCAGTGTACCCTGG+AGG | 0.708171 | 4_1:+68178100 | Msa0566940:CDS |
| GAATGCTTGAAAGTGGACCG+CGG | 0.713283 | 4_1:-68179978 | None:intergenic |
| CACACAAACAAAGAAAAGCG+AGG | 0.726712 | 4_1:+68180023 | Msa0566940:CDS |
| TGGTTGAAGACAATATGACG+TGG | 0.731025 | 4_1:+68182208 | Msa0566940:CDS |
| TCGTGCGCATTATATCACCC+CGG | 0.768678 | 4_1:+68182286 | Msa0566940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAGGAA+AGG | - | chr4_1:68179579-68179598 | None:intergenic | 10.0% |
| !! | TTTAAATTTATCTCGAAAAA+CGG | - | chr4_1:68178827-68178846 | None:intergenic | 15.0% |
| !!! | GTTAAATTTTCGTATAATTT+AGG | + | chr4_1:68178960-68178979 | Msa0566940:intron | 15.0% |
| !! | TTATTTATTCTTATTGTTGT+TGG | + | chr4_1:68179058-68179077 | Msa0566940:intron | 15.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | + | chr4_1:68180619-68180638 | Msa0566940:intron | 15.0% |
| !! | AAAACAATATTATTACCTTT+AGG | + | chr4_1:68181158-68181177 | Msa0566940:intron | 15.0% |
| !! | AAACAATATTATTACCTTTA+GGG | + | chr4_1:68181159-68181178 | Msa0566940:intron | 15.0% |
| !! | TTAATTGATAAATTGCTGAA+CGG | + | chr4_1:68178002-68178021 | Msa0566940:intron | 20.0% |
| !!! | TGATTAGAATAAGGTTATTT+TGG | - | chr4_1:68178698-68178717 | None:intergenic | 20.0% |
| !! | CACAATTAATGATTAGAATA+AGG | - | chr4_1:68178707-68178726 | None:intergenic | 20.0% |
| !! | AAAAGGATCAATTATATCTT+GGG | + | chr4_1:68178788-68178807 | Msa0566940:intron | 20.0% |
| !! | TTAAATTTATCTCGAAAAAC+GGG | - | chr4_1:68178826-68178845 | None:intergenic | 20.0% |
| !! | AAAAAATTTCATATACCAGA+AGG | - | chr4_1:68178889-68178908 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTCGTATACTTT+AGG | + | chr4_1:68179010-68179029 | Msa0566940:intron | 20.0% |
| !!! | TTCTATTTTCGTATACTTTA+GGG | + | chr4_1:68179011-68179030 | Msa0566940:intron | 20.0% |
| !!! | TAACTTTAAAAGCACAAATT+CGG | - | chr4_1:68179608-68179627 | None:intergenic | 20.0% |
| !! | TGAAGATAAAAAATTTCCAA+AGG | - | chr4_1:68180432-68180451 | None:intergenic | 20.0% |
| !! | TTGAAATAAGAAAATAATGC+AGG | + | chr4_1:68180719-68180738 | Msa0566940:intron | 20.0% |
| !! | AAATCAATCAAGAAAATGAA+TGG | + | chr4_1:68180820-68180839 | Msa0566940:CDS | 20.0% |
| !! | GTTAATAAAATGCATAAATC+TGG | + | chr4_1:68180910-68180929 | Msa0566940:CDS | 20.0% |
| !! | CATAATTATATACACATTGA+AGG | - | chr4_1:68181084-68181103 | None:intergenic | 20.0% |
| !! | TTATATTATTGATGCAACAT+TGG | - | chr4_1:68181140-68181159 | None:intergenic | 20.0% |
| !!! | ATATTATTAGGGTGATTTTA+TGG | - | chr4_1:68181940-68181959 | None:intergenic | 20.0% |
| !! | ATGTATTACATCATATAGAA+AGG | + | chr4_1:68182613-68182632 | Msa0566940:three_prime_UTR | 20.0% |
| ! | ATTCTGATTCTGTTATGTTA+TGG | + | chr4_1:68178234-68178253 | Msa0566940:intron | 25.0% |
| !!! | ATTTTAACGATCAATACTTG+AGG | - | chr4_1:68178289-68178308 | None:intergenic | 25.0% |
| ! | ATAGGTTACATACATAAACA+TGG | - | chr4_1:68178740-68178759 | None:intergenic | 25.0% |
| ! | GAAAAGGATCAATTATATCT+TGG | + | chr4_1:68178787-68178806 | Msa0566940:intron | 25.0% |
| ! | TAGTTAAACTACTAAAGAGT+AGG | + | chr4_1:68178848-68178867 | Msa0566940:intron | 25.0% |
| ! | TATAAATTGACAGGATTCTA+GGG | - | chr4_1:68178921-68178940 | None:intergenic | 25.0% |
| ! | TTATAAATTGACAGGATTCT+AGG | - | chr4_1:68178922-68178941 | None:intergenic | 25.0% |
| ! | TGCTGTTATTATAAATTGAC+AGG | - | chr4_1:68178930-68178949 | None:intergenic | 25.0% |
| ! | ATAATAACAGCAATGTTAAC+AGG | + | chr4_1:68178938-68178957 | Msa0566940:intron | 25.0% |
| !! | TCTATTTTCGTATACTTTAG+GGG | + | chr4_1:68179012-68179031 | Msa0566940:intron | 25.0% |
| !! | TATTCTTATTGTTGTTGGTA+AGG | + | chr4_1:68179063-68179082 | Msa0566940:intron | 25.0% |
| ! | TTCTTATCCAAATCCAAAAA+AGG | - | chr4_1:68179295-68179314 | None:intergenic | 25.0% |
| !! | CTTTGTTTAGATAATGACAA+GGG | + | chr4_1:68179461-68179480 | Msa0566940:intron | 25.0% |
| ! | ATCAATCTAATTCATAGAAG+TGG | - | chr4_1:68179660-68179679 | None:intergenic | 25.0% |
| ! | GCTATAGAGAAATCAATTTA+AGG | - | chr4_1:68179711-68179730 | None:intergenic | 25.0% |
| !!! | TAAGGTTAGTTTTTGATACT+TGG | + | chr4_1:68179759-68179778 | Msa0566940:intron | 25.0% |
| !!! | TTAGTTTTTGATACTTGGTA+TGG | + | chr4_1:68179764-68179783 | Msa0566940:intron | 25.0% |
| ! | TGACATATTAAAGTTTAACC+AGG | - | chr4_1:68180134-68180153 | None:intergenic | 25.0% |
| ! | TTATTCATTCGTTGTGTAAT+TGG | + | chr4_1:68180204-68180223 | Msa0566940:intron | 25.0% |
| ! | AACTATTATCACACATATGT+GGG | + | chr4_1:68180366-68180385 | Msa0566940:intron | 25.0% |
| ! | AAGGCACATTAATTGATTAT+TGG | - | chr4_1:68180413-68180432 | None:intergenic | 25.0% |
| ! | ATAATCAATTAATGTGCCTT+TGG | + | chr4_1:68180413-68180432 | Msa0566940:intron | 25.0% |
| ! | ATCTTATTCATTTCCTTGAT+TGG | + | chr4_1:68180508-68180527 | Msa0566940:intron | 25.0% |
| !! | AACAATTTTCTTGTAGATCA+AGG | - | chr4_1:68180539-68180558 | None:intergenic | 25.0% |
| ! | ATAGTTTATAGAGACCAAAT+TGG | - | chr4_1:68180605-68180624 | None:intergenic | 25.0% |
| ! | TTGGATGATAGTAAAGTTTA+GGG | - | chr4_1:68180646-68180665 | None:intergenic | 25.0% |
| ! | AATTATATACACATTGAAGG+TGG | - | chr4_1:68181081-68181100 | None:intergenic | 25.0% |
| ! | TCAAAAAGAAAATACCCTAA+AGG | - | chr4_1:68181176-68181195 | None:intergenic | 25.0% |
| !!! | TTTAGGGTATTTTCTTTTTG+AGG | + | chr4_1:68181175-68181194 | Msa0566940:intron | 25.0% |
| !!! | CAATCTCTAGTTTGTTAAAA+AGG | - | chr4_1:68181611-68181630 | None:intergenic | 25.0% |
| !!! | GGAAATTAGTGCTTATTTTT+TGG | + | chr4_1:68181812-68181831 | Msa0566940:intron | 25.0% |
| ! | TTTGGAAGGAGATATTATTA+GGG | - | chr4_1:68181951-68181970 | None:intergenic | 25.0% |
| !! | GTATGATATCTTTTAAACCT+AGG | + | chr4_1:68182002-68182021 | Msa0566940:intron | 25.0% |
| ! | CAAAGAATTGTTTAGGTAAA+GGG | - | chr4_1:68182031-68182050 | None:intergenic | 25.0% |
| ! | TCAAAGAATTGTTTAGGTAA+AGG | - | chr4_1:68182032-68182051 | None:intergenic | 25.0% |
| ! | GATATATAGAATGAGTTTGA+AGG | + | chr4_1:68182381-68182400 | Msa0566940:exon | 25.0% |
| ! | TTACAAACTAATATACAGAC+TGG | - | chr4_1:68182537-68182556 | None:intergenic | 25.0% |
| !! | TTGTTGCATAGTCTATTTTA+TGG | + | chr4_1:68182565-68182584 | Msa0566940:three_prime_UTR | 25.0% |
| !! | TAGTCTATTTTATGGTTATG+TGG | + | chr4_1:68182573-68182592 | Msa0566940:three_prime_UTR | 25.0% |
| TTCGCATCATTCAATAAACT+AGG | + | chr4_1:68177976-68177995 | Msa0566940:intron | 30.0% | |
| TCGCATCATTCAATAAACTA+GGG | + | chr4_1:68177977-68177996 | Msa0566940:intron | 30.0% | |
| TACTAACGTTTGGAAATAGA+GGG | - | chr4_1:68178622-68178641 | None:intergenic | 30.0% | |
| TACTACAAGATATTGGGAAT+AGG | - | chr4_1:68178758-68178777 | None:intergenic | 30.0% | |
| TTCCCAATATCTTGTAGTAT+AGG | + | chr4_1:68178759-68178778 | Msa0566940:intron | 30.0% | |
| CACCTATACTACAAGATATT+GGG | - | chr4_1:68178764-68178783 | None:intergenic | 30.0% | |
| AAACTACTAAAGAGTAGGAA+TGG | + | chr4_1:68178853-68178872 | Msa0566940:intron | 30.0% | |
| CAACCTTAACCTACAATTAA+CGG | - | chr4_1:68179111-68179130 | None:intergenic | 30.0% | |
| GGTTGAATAATCATGTATCT+GGG | + | chr4_1:68179248-68179267 | Msa0566940:CDS | 30.0% | |
| !!! | TTATTCACTTCCTCCTTTTT+TGG | + | chr4_1:68179279-68179298 | Msa0566940:CDS | 30.0% |
| TTATCCAAATCCAAAAAAGG+AGG | - | chr4_1:68179292-68179311 | None:intergenic | 30.0% | |
| AACAGCATTTGATCTTTGAT+CGG | - | chr4_1:68179380-68179399 | None:intergenic | 30.0% | |
| TCAGGTTTATATACTTCATC+TGG | + | chr4_1:68179438-68179457 | Msa0566940:intron | 30.0% | |
| !! | GCTTTGTTTAGATAATGACA+AGG | + | chr4_1:68179460-68179479 | Msa0566940:intron | 30.0% |
| AATCTAATTCATAGAAGTGG+TGG | - | chr4_1:68179657-68179676 | None:intergenic | 30.0% | |
| TCATGAAATCGTACAACAAA+CGG | - | chr4_1:68179733-68179752 | None:intergenic | 30.0% | |
| ACGATTTCATGACAGTTATA+AGG | + | chr4_1:68179741-68179760 | Msa0566940:intron | 30.0% | |
| TAATGTCAGGATGAATAATC+TGG | + | chr4_1:68179864-68179883 | Msa0566940:CDS | 30.0% | |
| AGCAAAATTAGAACATGCTA+AGG | - | chr4_1:68179937-68179956 | None:intergenic | 30.0% | |
| GATTTCATATGACATTGTTG+AGG | + | chr4_1:68180261-68180280 | Msa0566940:intron | 30.0% | |
| TGACATTGTTGAGGATATAT+TGG | + | chr4_1:68180270-68180289 | Msa0566940:CDS | 30.0% | |
| CAACTATTATCACACATATG+TGG | + | chr4_1:68180365-68180384 | Msa0566940:intron | 30.0% | |
| ACTATTATCACACATATGTG+GGG | + | chr4_1:68180367-68180386 | Msa0566940:intron | 30.0% | |
| AATGTTCTACAAGTACATAG+AGG | - | chr4_1:68180469-68180488 | None:intergenic | 30.0% | |
| GTTGGATGATAGTAAAGTTT+AGG | - | chr4_1:68180647-68180666 | None:intergenic | 30.0% | |
| ATACTCTCACAGTAGAAAAA+TGG | - | chr4_1:68180686-68180705 | None:intergenic | 30.0% | |
| AAGAAAATAATGCAGGTACA+TGG | + | chr4_1:68180726-68180745 | Msa0566940:intron | 30.0% | |
| AATTGTTAGATAGTTCTCCA+AGG | + | chr4_1:68180878-68180897 | Msa0566940:CDS | 30.0% | |
| ATTGTTAGATAGTTCTCCAA+GGG | + | chr4_1:68180879-68180898 | Msa0566940:CDS | 30.0% | |
| CAACATTGGAGTTTATAAGA+CGG | - | chr4_1:68181126-68181145 | None:intergenic | 30.0% | |
| !!! | TATGCTTTTTTGTTGATGTC+AGG | + | chr4_1:68181264-68181283 | Msa0566940:intron | 30.0% |
| AATACTTCAGAAACATTGCA+TGG | - | chr4_1:68181294-68181313 | None:intergenic | 30.0% | |
| !! | ATGCAATGTTTCTGAAGTAT+TGG | + | chr4_1:68181293-68181312 | Msa0566940:CDS | 30.0% |
| ATCATCATCAATAAGTACGA+GGG | - | chr4_1:68181523-68181542 | None:intergenic | 30.0% | |
| ! | ATTTGGAACGTTTAATTCCA+TGG | + | chr4_1:68181687-68181706 | Msa0566940:intron | 30.0% |
| ! | TTTGGAACGTTTAATTCCAT+GGG | + | chr4_1:68181688-68181707 | Msa0566940:intron | 30.0% |
| ! | TTGTTGTTGTTGTAATTCCA+TGG | + | chr4_1:68181750-68181769 | Msa0566940:intron | 30.0% |
| ! | TGTTGTTGTTGTAATTCCAT+GGG | + | chr4_1:68181751-68181770 | Msa0566940:intron | 30.0% |
| GCACTAATTTCCTCAAAAAA+TGG | - | chr4_1:68181804-68181823 | None:intergenic | 30.0% | |
| GTTTGGAAGGAGATATTATT+AGG | - | chr4_1:68181952-68181971 | None:intergenic | 30.0% | |
| TAATTGAGTACTTTGTTGCA+AGG | + | chr4_1:68182086-68182105 | Msa0566940:intron | 30.0% | |
| AATTGAGTACTTTGTTGCAA+GGG | + | chr4_1:68182087-68182106 | Msa0566940:intron | 30.0% | |
| CCATACAATCTTATTCTAGA+CGG | - | chr4_1:68182470-68182489 | None:intergenic | 30.0% | |
| TTAGTTACGTTAACGAGAGA+AGG | - | chr4_1:68177577-68177596 | None:intergenic | 35.0% | |
| !! | TTGAAGAGAGTAGAAGCATT+TGG | - | chr4_1:68177637-68177656 | None:intergenic | 35.0% |
| GTTGAGATTTGAAGGTAAGT+GGG | - | chr4_1:68177670-68177689 | None:intergenic | 35.0% | |
| TGGTTTGAAGGAAACAAGAA+GGG | - | chr4_1:68177703-68177722 | None:intergenic | 35.0% | |
| ATGGTTTGAAGGAAACAAGA+AGG | - | chr4_1:68177704-68177723 | None:intergenic | 35.0% | |
| TTCGAAAGAGATGAAGTTGT+TGG | - | chr4_1:68177922-68177941 | None:intergenic | 35.0% | |
| !! | TAGTTATGTGATGGATCAAC+TGG | + | chr4_1:68178069-68178088 | Msa0566940:CDS | 35.0% |
| CTACTAACGTTTGGAAATAG+AGG | - | chr4_1:68178623-68178642 | None:intergenic | 35.0% | |
| TTCCAAACGTTAGTAGCTTA+AGG | + | chr4_1:68178627-68178646 | Msa0566940:intron | 35.0% | |
| AACCTTAAGCTACTAACGTT+TGG | - | chr4_1:68178632-68178651 | None:intergenic | 35.0% | |
| CCACCTATACTACAAGATAT+TGG | - | chr4_1:68178765-68178784 | None:intergenic | 35.0% | |
| CCAATATCTTGTAGTATAGG+TGG | + | chr4_1:68178762-68178781 | Msa0566940:intron | 35.0% | |
| TGTAGTATAGGTGGAAGAAA+AGG | + | chr4_1:68178771-68178790 | Msa0566940:intron | 35.0% | |
| TACTAAAGAGTAGGAATGGA+GGG | + | chr4_1:68178857-68178876 | Msa0566940:intron | 35.0% | |
| ! | TCTTATTGTTGTTGGTAAGG+AGG | + | chr4_1:68179066-68179085 | Msa0566940:intron | 35.0% |
| ! | CTTATTGTTGTTGGTAAGGA+GGG | + | chr4_1:68179067-68179086 | Msa0566940:intron | 35.0% |
| TTAACCTACAATTAACGGTC+AGG | - | chr4_1:68179106-68179125 | None:intergenic | 35.0% | |
| TGACCGTTAATTGTAGGTTA+AGG | + | chr4_1:68179105-68179124 | Msa0566940:intron | 35.0% | |
| AGAACTACAGCTTTACATTC+AGG | - | chr4_1:68179136-68179155 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTTAACCAT+GGG | - | chr4_1:68179160-68179179 | None:intergenic | 35.0% | |
| AACAAAGGGATGTTTAACCA+TGG | - | chr4_1:68179161-68179180 | None:intergenic | 35.0% | |
| ! | GTTAAACATCCCTTTGTTGT+TGG | + | chr4_1:68179163-68179182 | Msa0566940:CDS | 35.0% |
| GGGTTGAATAATCATGTATC+TGG | + | chr4_1:68179247-68179266 | Msa0566940:CDS | 35.0% | |
| GAATAATCATGTATCTGGGA+AGG | + | chr4_1:68179252-68179271 | Msa0566940:CDS | 35.0% | |
| !!! | ACTTCCTCCTTTTTTGGATT+TGG | + | chr4_1:68179285-68179304 | Msa0566940:CDS | 35.0% |
| TGGATTTGGATAAGAAGTCA+TGG | + | chr4_1:68179299-68179318 | Msa0566940:CDS | 35.0% | |
| GGATTTGGATAAGAAGTCAT+GGG | + | chr4_1:68179300-68179319 | Msa0566940:CDS | 35.0% | |
| TATGGCATATGTTATGGATC+AGG | + | chr4_1:68179420-68179439 | Msa0566940:CDS | 35.0% | |
| ! | TCACACTTCTTGGATTTTGT+TGG | + | chr4_1:68179526-68179545 | Msa0566940:intron | 35.0% |
| TTGGTATGGACCTAAATTTC+TGG | + | chr4_1:68179778-68179797 | Msa0566940:intron | 35.0% | |
| GTAACATTGCTTTCTGCAAA+CGG | - | chr4_1:68179822-68179841 | None:intergenic | 35.0% | |
| ! | TGTTACTTCAGCAATCAACA+TGG | + | chr4_1:68179836-68179855 | Msa0566940:CDS | 35.0% |
| CAACATGGCAAAATAATGTC+AGG | + | chr4_1:68179851-68179870 | Msa0566940:CDS | 35.0% | |
| TGCTAAGGCTAAGAATAAAG+AGG | - | chr4_1:68179922-68179941 | None:intergenic | 35.0% | |
| AAGGTTTGAATGCTTGAAAG+TGG | - | chr4_1:68179988-68180007 | None:intergenic | 35.0% | |
| ACTTTCAAGCATTCAAACCT+TGG | + | chr4_1:68179987-68180006 | Msa0566940:CDS | 35.0% | |
| CTTTCAAGCATTCAAACCTT+GGG | + | chr4_1:68179988-68180007 | Msa0566940:CDS | 35.0% | |
| !! | TTTTCTTTGTTTGTGTGGAC+AGG | - | chr4_1:68180020-68180039 | None:intergenic | 35.0% |
| AGGTTAGAAAGAGTGACTTA+TGG | - | chr4_1:68180114-68180133 | None:intergenic | 35.0% | |
| ATAAGTCACTCTTTCTAACC+TGG | + | chr4_1:68180113-68180132 | Msa0566940:intron | 35.0% | |
| TATGTCAGTTCTATAACGAG+TGG | + | chr4_1:68180147-68180166 | Msa0566940:intron | 35.0% | |
| TTGTCAAATATACAGCATCC+TGG | - | chr4_1:68180333-68180352 | None:intergenic | 35.0% | |
| GGATGCTGTATATTTGACAA+AGG | + | chr4_1:68180333-68180352 | Msa0566940:CDS | 35.0% | |
| GATCAAGGAAAATCCAATCA+AGG | - | chr4_1:68180524-68180543 | None:intergenic | 35.0% | |
| ! | AGAGTTTTTGTCCAATATGC+AGG | + | chr4_1:68180774-68180793 | Msa0566940:intron | 35.0% |
| ! | CAGAATATTAGCCTGCATAT+TGG | - | chr4_1:68180788-68180807 | None:intergenic | 35.0% |
| CATCATCATCAATAAGTACG+AGG | - | chr4_1:68181524-68181543 | None:intergenic | 35.0% | |
| !! | CTCGTACTTATTGATGATGA+TGG | + | chr4_1:68181522-68181541 | Msa0566940:CDS | 35.0% |
| GTTACCATATAGTGCATATC+AGG | - | chr4_1:68181549-68181568 | None:intergenic | 35.0% | |
| ! | AAAAGGAAAGTGCATAAGCA+GGG | - | chr4_1:68181594-68181613 | None:intergenic | 35.0% |
| ! | AAAAAGGAAAGTGCATAAGC+AGG | - | chr4_1:68181595-68181614 | None:intergenic | 35.0% |
| AAAAACATTCTCATGACCTG+TGG | + | chr4_1:68181660-68181679 | Msa0566940:intron | 35.0% | |
| AAAACATTCTCATGACCTGT+GGG | + | chr4_1:68181661-68181680 | Msa0566940:intron | 35.0% | |
| !!! | ACAACTGATGCCATTTTTTG+AGG | + | chr4_1:68181791-68181810 | Msa0566940:intron | 35.0% |
| TTGCAAGGGATTTGTGAAAA+TGG | + | chr4_1:68182101-68182120 | Msa0566940:intron | 35.0% | |
| TCAGATTTAACAACTGCCAT+TGG | - | chr4_1:68182363-68182382 | None:intergenic | 35.0% | |
| ! | CCGTCTAGAATAAGATTGTA+TGG | + | chr4_1:68182467-68182486 | Msa0566940:three_prime_UTR | 35.0% |
| TACGTTAACGAGAGAAGGAA+AGG | - | chr4_1:68177572-68177591 | None:intergenic | 40.0% | |
| CGTTGAGATTTGAAGGTAAG+TGG | - | chr4_1:68177671-68177690 | None:intergenic | 40.0% | |
| CTCGAAAAACATCGCAGAAA+CGG | + | chr4_1:68177857-68177876 | Msa0566940:CDS | 40.0% | |
| GAAAGAGATGAAGTTGTTGG+AGG | - | chr4_1:68177919-68177938 | None:intergenic | 40.0% | |
| ACGAACCGATAAGAACGATT+CGG | - | chr4_1:68177954-68177973 | None:intergenic | 40.0% | |
| !! | TCGTTTTTGTTGTGTTGTGC+AGG | + | chr4_1:68178027-68178046 | Msa0566940:intron | 40.0% |
| !! | AGTCATTTTAATGTTCCCGC+CGG | + | chr4_1:68178163-68178182 | Msa0566940:CDS | 40.0% |
| CTACTAAAGAGTAGGAATGG+AGG | + | chr4_1:68178856-68178875 | Msa0566940:intron | 40.0% | |
| TAAAGCTGTAGTTCTTCCCA+TGG | + | chr4_1:68179141-68179160 | Msa0566940:CDS | 40.0% | |
| ACCAAGAAGCCAACAACAAA+GGG | - | chr4_1:68179175-68179194 | None:intergenic | 40.0% | |
| AACCAAGAAGCCAACAACAA+AGG | - | chr4_1:68179176-68179195 | None:intergenic | 40.0% | |
| CATGGGAAATTCAGACTCTT+CGG | + | chr4_1:68179317-68179336 | Msa0566940:CDS | 40.0% | |
| AATTCAGACTCTTCGGATCA+AGG | + | chr4_1:68179324-68179343 | Msa0566940:CDS | 40.0% | |
| TGTTGACATTTCACAGTCTC+TGG | + | chr4_1:68179396-68179415 | Msa0566940:CDS | 40.0% | |
| TCTGGCTATGGCATATGTTA+TGG | + | chr4_1:68179414-68179433 | Msa0566940:CDS | 40.0% | |
| GATATGCTTGTCACACTTCT+TGG | + | chr4_1:68179516-68179535 | Msa0566940:intron | 40.0% | |
| ! | CTTCTTGGATTTTGTTGGAG+TGG | + | chr4_1:68179531-68179550 | Msa0566940:intron | 40.0% |
| !! | GACCTAAATTTCTGGCTCAT+CGG | + | chr4_1:68179786-68179805 | Msa0566940:intron | 40.0% |
| !! | CTCGCTTTTCTTTGTTTGTG+TGG | - | chr4_1:68180025-68180044 | None:intergenic | 40.0% |
| CACACAAACAAAGAAAAGCG+AGG | + | chr4_1:68180023-68180042 | Msa0566940:CDS | 40.0% | |
| AGAGTGACTTATGGCAGATA+TGG | - | chr4_1:68180105-68180124 | None:intergenic | 40.0% | |
| TAACGAGTGGTTAATAAGCC+AGG | + | chr4_1:68180160-68180179 | Msa0566940:intron | 40.0% | |
| GGTGAGATGGTGATAGTTTA+GGG | - | chr4_1:68180584-68180603 | None:intergenic | 40.0% | |
| TGGTGAGATGGTGATAGTTT+AGG | - | chr4_1:68180585-68180604 | None:intergenic | 40.0% | |
| CTATCACCATCTCACCAATT+TGG | + | chr4_1:68180588-68180607 | Msa0566940:intron | 40.0% | |
| TAGAGACCAAATTGGTGAGA+TGG | - | chr4_1:68180597-68180616 | None:intergenic | 40.0% | |
| GGTCAGTAGAAACTTTGAGT+TGG | - | chr4_1:68180665-68180684 | None:intergenic | 40.0% | |
| TTAGATAGTTCTCCAAGGGA+TGG | + | chr4_1:68180883-68180902 | Msa0566940:CDS | 40.0% | |
| TTATTAACAGAGCCATCCCT+TGG | - | chr4_1:68180898-68180917 | None:intergenic | 40.0% | |
| TGGAATCAGGTAGGTTTGAT+TGG | + | chr4_1:68181011-68181030 | Msa0566940:intron | 40.0% | |
| !! | TTCTGAAGTATTGGCAGACT+TGG | + | chr4_1:68181302-68181321 | Msa0566940:CDS | 40.0% |
| !! | CGTTTTTGATTCTGAGCAAG+AGG | - | chr4_1:68181342-68181361 | None:intergenic | 40.0% |
| GCTTTCAGCAACCTTATTGA+AGG | + | chr4_1:68181429-68181448 | Msa0566940:CDS | 40.0% | |
| ! | GGAGTAAAGCACCTTCAATA+AGG | - | chr4_1:68181443-68181462 | None:intergenic | 40.0% |
| TGGACCTGATATGCACTATA+TGG | + | chr4_1:68181542-68181561 | Msa0566940:CDS | 40.0% | |
| ! | AAAGGAAAGTGCATAAGCAG+GGG | - | chr4_1:68181593-68181612 | None:intergenic | 40.0% |
| AAACATTCTCATGACCTGTG+GGG | + | chr4_1:68181662-68181681 | Msa0566940:intron | 40.0% | |
| AACGTTTAATTCCATGGGCT+GGG | + | chr4_1:68181693-68181712 | Msa0566940:intron | 40.0% | |
| TATACTGTCTATACAGCCCA+TGG | - | chr4_1:68181770-68181789 | None:intergenic | 40.0% | |
| AAAGTTGCATACAGTACGTG+GGG | - | chr4_1:68181868-68181887 | None:intergenic | 40.0% | |
| CAAAGTTGCATACAGTACGT+GGG | - | chr4_1:68181869-68181888 | None:intergenic | 40.0% | |
| GGGTAAGTCTATGAAGATGT+GGG | + | chr4_1:68181910-68181929 | Msa0566940:intron | 40.0% | |
| GGTAAGTCTATGAAGATGTG+GGG | + | chr4_1:68181911-68181930 | Msa0566940:intron | 40.0% | |
| TTGTGCAGCAAGGAAATGTT+TGG | - | chr4_1:68181969-68181988 | None:intergenic | 40.0% | |
| GTTTAGGTAAAGGGTTTCCT+AGG | - | chr4_1:68182022-68182041 | None:intergenic | 40.0% | |
| ATGCATTCACTCACACCATA+CGG | + | chr4_1:68182162-68182181 | Msa0566940:CDS | 40.0% | |
| AGAACTCTTGGCTGAAGATA+TGG | + | chr4_1:68182188-68182207 | Msa0566940:CDS | 40.0% | |
| TGGTTGAAGACAATATGACG+TGG | + | chr4_1:68182208-68182227 | Msa0566940:CDS | 40.0% | |
| ! | TGTAGAACTTTGGCTTCCAA+TGG | + | chr4_1:68182344-68182363 | Msa0566940:CDS | 40.0% |
| ! | ACATCATATAGAAAGGCGTG+TGG | + | chr4_1:68182620-68182639 | Msa0566940:three_prime_UTR | 40.0% |
| GAAGGAAACAAGAAGGGTTG+CGG | - | chr4_1:68177697-68177716 | None:intergenic | 45.0% | |
| !! | GGTTAGCGTTGATGGTTTGA+AGG | - | chr4_1:68177715-68177734 | None:intergenic | 45.0% |
| ATTGTTCCGGTGATCGTCAT+CGG | - | chr4_1:68177750-68177769 | None:intergenic | 45.0% | |
| CGTTCCCGAATCGTTCTTAT+CGG | + | chr4_1:68177946-68177965 | Msa0566940:CDS | 45.0% | |
| CGAACCGATAAGAACGATTC+GGG | - | chr4_1:68177953-68177972 | None:intergenic | 45.0% | |
| TCCATCACATAACTACCTGC+CGG | - | chr4_1:68178064-68178083 | None:intergenic | 45.0% | |
| TGAGCAACACACCTGCATTT+CGG | - | chr4_1:68178215-68178234 | None:intergenic | 45.0% | |
| ! | GTATACTTTAGGGGCTGAGT+AGG | + | chr4_1:68179021-68179040 | Msa0566940:intron | 45.0% |
| TGAGCCTGACCGTTAATTGT+AGG | + | chr4_1:68179099-68179118 | Msa0566940:intron | 45.0% | |
| !! | TCCCTTTGTTGTTGGCTTCT+TGG | + | chr4_1:68179171-68179190 | Msa0566940:CDS | 45.0% |
| GAGCTCGAAACTTGTGTGAA+GGG | + | chr4_1:68179214-68179233 | Msa0566940:CDS | 45.0% | |
| TGTGTGAAGGGTCAAAGTGA+TGG | + | chr4_1:68179226-68179245 | Msa0566940:CDS | 45.0% | |
| GTGTGAAGGGTCAAAGTGAT+GGG | + | chr4_1:68179227-68179246 | Msa0566940:CDS | 45.0% | |
| GTGAAGTTGCACATACCAAC+CGG | - | chr4_1:68179355-68179374 | None:intergenic | 45.0% | |
| CATTTCACAGTCTCTGGCTA+TGG | + | chr4_1:68179402-68179421 | Msa0566940:CDS | 45.0% | |
| CACCGATGAGCCAGAAATTT+AGG | - | chr4_1:68179791-68179810 | None:intergenic | 45.0% | |
| ! | CGGATCTGGTTTGTGTTTGA+AGG | - | chr4_1:68179961-68179980 | None:intergenic | 45.0% |
| TCAAACACAAACCAGATCCG+CGG | + | chr4_1:68179961-68179980 | Msa0566940:intron | 45.0% | |
| ! | TGTGGACAGGATTTTACCCA+AGG | - | chr4_1:68180007-68180026 | None:intergenic | 45.0% |
| AACTTCGCCATCTCATCAGT+TGG | - | chr4_1:68180186-68180205 | None:intergenic | 45.0% | |
| GTTGAGGATATATTGGCGCT+AGG | + | chr4_1:68180277-68180296 | Msa0566940:CDS | 45.0% | |
| TGATGTTCTCCAACAACTCC+AGG | + | chr4_1:68180312-68180331 | Msa0566940:CDS | 45.0% | |
| ATACAGCATCCTGGAGTTGT+TGG | - | chr4_1:68180324-68180343 | None:intergenic | 45.0% | |
| AAACTCTACATCAGACGCAC+TGG | - | chr4_1:68180761-68180780 | None:intergenic | 45.0% | |
| !! | AAGGGGCATCTCTATATCCT+GGG | - | chr4_1:68180962-68180981 | None:intergenic | 45.0% |
| TACCTGATTCCATGTCGTAG+TGG | - | chr4_1:68181003-68181022 | None:intergenic | 45.0% | |
| ACTACGACATGGAATCAGGT+AGG | + | chr4_1:68181002-68181021 | Msa0566940:intron | 45.0% | |
| AGACGGCAGAATTCACAGAA+TGG | - | chr4_1:68181109-68181128 | None:intergenic | 45.0% | |
| TCTTCTACAGCAGCTAGCAA+AGG | - | chr4_1:68181393-68181412 | None:intergenic | 45.0% | |
| CAATAAGGTTGCTGAAAGCC+TGG | - | chr4_1:68181428-68181447 | None:intergenic | 45.0% | |
| GCTTTACTCCGAACACATGT+TGG | + | chr4_1:68181453-68181472 | Msa0566940:CDS | 45.0% | |
| TTACTCCGAACACATGTTGG+AGG | + | chr4_1:68181456-68181475 | Msa0566940:CDS | 45.0% | |
| CCTTTCCTCCAACATGTGTT+CGG | - | chr4_1:68181464-68181483 | None:intergenic | 45.0% | |
| TCATGACCTGTGGGGAAATT+TGG | + | chr4_1:68181670-68181689 | Msa0566940:intron | 45.0% | |
| AACGTTCCAAATTTCCCCAC+AGG | - | chr4_1:68181679-68181698 | None:intergenic | 45.0% | |
| GAACGTTTAATTCCATGGGC+TGG | + | chr4_1:68181692-68181711 | Msa0566940:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:68181721-68181740 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:68181722-68181741 | None:intergenic | 45.0% |
| GCAAAGTTGCATACAGTACG+TGG | - | chr4_1:68181870-68181889 | None:intergenic | 45.0% | |
| CATGCTTCGCAGTAGTATCT+CGG | + | chr4_1:68181889-68181908 | Msa0566940:intron | 45.0% | |
| ATGCTTCGCAGTAGTATCTC+GGG | + | chr4_1:68181890-68181909 | Msa0566940:intron | 45.0% | |
| CGGGTAAGTCTATGAAGATG+TGG | + | chr4_1:68181909-68181928 | Msa0566940:intron | 45.0% | |
| GCAGCAAGGAAATGTTTGGA+AGG | - | chr4_1:68181965-68181984 | None:intergenic | 45.0% | |
| GCTCAAATCTTTGTGCAGCA+AGG | - | chr4_1:68181979-68181998 | None:intergenic | 45.0% | |
| ACCATACGGACAAGAACTCT+TGG | + | chr4_1:68182176-68182195 | Msa0566940:CDS | 45.0% | |
| ATGACGTGGAACTTTGTTGC+TGG | + | chr4_1:68182222-68182241 | Msa0566940:CDS | 45.0% | |
| TGACGTGGAACTTTGTTGCT+GGG | + | chr4_1:68182223-68182242 | Msa0566940:CDS | 45.0% | |
| ATAACTCTCCAGTATCTCCC+GGG | - | chr4_1:68182259-68182278 | None:intergenic | 45.0% | |
| CATAACTCTCCAGTATCTCC+CGG | - | chr4_1:68182260-68182279 | None:intergenic | 45.0% | |
| TAGACGGTTTCTCAACTCTC+AGG | - | chr4_1:68182454-68182473 | None:intergenic | 45.0% | |
| !! | AAGAAAAAAAAAAAAAAAAA+AGG | - | chr4_1:68179584-68179603 | None:intergenic | 5.0% |
| GCGGCATCGTTGAGATTTGA+AGG | - | chr4_1:68177678-68177697 | None:intergenic | 50.0% | |
| ! | GGAGTTAGGGTTAGCGTTGA+TGG | - | chr4_1:68177723-68177742 | None:intergenic | 50.0% |
| CGTCATCGGAATCGGAGTTA+GGG | - | chr4_1:68177736-68177755 | None:intergenic | 50.0% | |
| TCGTCATCGGAATCGGAGTT+AGG | - | chr4_1:68177737-68177756 | None:intergenic | 50.0% | |
| !! | TGAGGGTGGTGGAATTGTTC+CGG | - | chr4_1:68177763-68177782 | None:intergenic | 50.0% |
| GGTGGAGACTTTACGAATGG+CGG | - | chr4_1:68177813-68177832 | None:intergenic | 50.0% | |
| GGAGGTGGAGACTTTACGAA+TGG | - | chr4_1:68177816-68177835 | None:intergenic | 50.0% | |
| AGTCGATGGAAATCGGGACT+AGG | - | chr4_1:68177893-68177912 | None:intergenic | 50.0% | |
| AGGCAGAGTCGATGGAAATC+GGG | - | chr4_1:68177899-68177918 | None:intergenic | 50.0% | |
| GAGGCAGAGTCGATGGAAAT+CGG | - | chr4_1:68177900-68177919 | None:intergenic | 50.0% | |
| TGTGCAGGTGTACGTTAGAC+CGG | + | chr4_1:68178042-68178061 | Msa0566940:intron | 50.0% | |
| ACCGGCAGGTAGTTATGTGA+TGG | + | chr4_1:68178060-68178079 | Msa0566940:CDS | 50.0% | |
| ! | TGATGGATCAACTGGAGCTG+CGG | + | chr4_1:68178077-68178096 | Msa0566940:CDS | 50.0% |
| GATGCTGAGTCAGACGAAGA+AGG | + | chr4_1:68178124-68178143 | Msa0566940:CDS | 50.0% | |
| ! | CATTTCGGAAAGTGCGGTCT+CGG | - | chr4_1:68178200-68178219 | None:intergenic | 50.0% |
| CACCTGCATTTCGGAAAGTG+CGG | - | chr4_1:68178206-68178225 | None:intergenic | 50.0% | |
| AATGGAGGGAGTAGTCCTTC+TGG | + | chr4_1:68178871-68178890 | Msa0566940:intron | 50.0% | |
| CTTGGTTGCTGAGCTTCCAT+TGG | + | chr4_1:68179189-68179208 | Msa0566940:CDS | 50.0% | |
| CAAGTTTCGAGCTCCACCAA+TGG | - | chr4_1:68179208-68179227 | None:intergenic | 50.0% | |
| GGAGCTCGAAACTTGTGTGA+AGG | + | chr4_1:68179213-68179232 | Msa0566940:CDS | 50.0% | |
| TCTTCGGATCAAGGATGAGC+CGG | + | chr4_1:68179333-68179352 | Msa0566940:CDS | 50.0% | |
| GAATGCTTGAAAGTGGACCG+CGG | - | chr4_1:68179981-68180000 | None:intergenic | 50.0% | |
| GCAGCAGCACTAAGAGAAAG+TGG | - | chr4_1:68180940-68180959 | None:intergenic | 50.0% | |
| !! | GAAGGGGCATCTCTATATCC+TGG | - | chr4_1:68180963-68180982 | None:intergenic | 50.0% |
| AGCGAGAGCTAAAGGTGGAA+GGG | - | chr4_1:68180980-68180999 | None:intergenic | 50.0% | |
| CTCCACTACGACATGGAATC+AGG | + | chr4_1:68180998-68181017 | Msa0566940:CDS | 50.0% | |
| CCGAACACATGTTGGAGGAA+AGG | + | chr4_1:68181461-68181480 | Msa0566940:CDS | 50.0% | |
| GTACCCCACTTAGTGGGATA+AGG | + | chr4_1:68181715-68181734 | Msa0566940:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:68181723-68181742 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:68181720-68181739 | Msa0566940:intron | 50.0% | |
| ! | GTGGGATAAGGCTTGGTTGT+TGG | + | chr4_1:68181727-68181746 | Msa0566940:intron | 50.0% |
| GCCAAGAGTTCTTGTCCGTA+TGG | - | chr4_1:68182180-68182199 | None:intergenic | 50.0% | |
| CGGGAGATACTGGAGAGTTA+TGG | + | chr4_1:68182258-68182277 | Msa0566940:CDS | 50.0% | |
| TCGTGCGCATTATATCACCC+CGG | + | chr4_1:68182286-68182305 | Msa0566940:CDS | 50.0% | |
| ! | AAGTGGAGCATCTTTGGTCC+GGG | - | chr4_1:68182307-68182326 | None:intergenic | 50.0% |
| ! | CAAGTGGAGCATCTTTGGTC+CGG | - | chr4_1:68182308-68182327 | None:intergenic | 50.0% |
| ! | AGCTCCAAGTGGAGCATCTT+TGG | - | chr4_1:68182313-68182332 | None:intergenic | 50.0% |
| AAAGATGCTCCACTTGGAGC+TGG | + | chr4_1:68182312-68182331 | Msa0566940:CDS | 50.0% | |
| AAGATGCTCCACTTGGAGCT+GGG | + | chr4_1:68182313-68182332 | Msa0566940:CDS | 50.0% | |
| GGGGAACTCGTGTAGAACTT+TGG | + | chr4_1:68182334-68182353 | Msa0566940:CDS | 50.0% | |
| CCGGTGATCGTCATCGGAAT+CGG | - | chr4_1:68177744-68177763 | None:intergenic | 55.0% | |
| CCGATTCCGATGACGATCAC+CGG | + | chr4_1:68177741-68177760 | Msa0566940:CDS | 55.0% | |
| GGAGACTTTACGAATGGCGG+AGG | - | chr4_1:68177810-68177829 | None:intergenic | 55.0% | |
| AGTCGCTGAGTGAACTCGAC+GGG | - | chr4_1:68177839-68177858 | None:intergenic | 55.0% | |
| GAGTCGCTGAGTGAACTCGA+CGG | - | chr4_1:68177840-68177859 | None:intergenic | 55.0% | |
| GTTGTTGGAGGCAGAGTCGA+TGG | - | chr4_1:68177907-68177926 | None:intergenic | 55.0% | |
| CTGACTCAGCATCTCCTCCA+GGG | - | chr4_1:68178117-68178136 | None:intergenic | 55.0% | |
| TCTGACTCAGCATCTCCTCC+AGG | - | chr4_1:68178118-68178137 | None:intergenic | 55.0% | |
| GACCGCACTTTCCGAAATGC+AGG | + | chr4_1:68178201-68178220 | Msa0566940:CDS | 55.0% | |
| GGTTGCTGAGCTTCCATTGG+TGG | + | chr4_1:68179192-68179211 | Msa0566940:CDS | 55.0% | |
| TTGAAAGTGGACCGCGGATC+TGG | - | chr4_1:68179975-68179994 | None:intergenic | 55.0% | |
| AGCCAGGCCAACTGATGAGA+TGG | + | chr4_1:68180176-68180195 | Msa0566940:intron | 55.0% | |
| ! | TTCTCTTAGTGCTGCTGCCC+AGG | + | chr4_1:68180942-68180961 | Msa0566940:CDS | 55.0% |
| GCGAGAGCTAAAGGTGGAAG+GGG | - | chr4_1:68180979-68180998 | None:intergenic | 55.0% | |
| GAGCGAGAGCTAAAGGTGGA+AGG | - | chr4_1:68180981-68181000 | None:intergenic | 55.0% | |
| AGTGGAGCGAGAGCTAAAGG+TGG | - | chr4_1:68180985-68181004 | None:intergenic | 55.0% | |
| ! | CGTAGTGGAGCGAGAGCTAA+AGG | - | chr4_1:68180988-68181007 | None:intergenic | 55.0% |
| GTGTCTACTTCTGCACCAGC+TGG | + | chr4_1:68181492-68181511 | Msa0566940:CDS | 55.0% | |
| TCTACTTCTGCACCAGCTGG+TGG | + | chr4_1:68181495-68181514 | Msa0566940:CDS | 55.0% | |
| TTGCTGGGCTGACTATTGCC+CGG | + | chr4_1:68182238-68182257 | Msa0566940:CDS | 55.0% | |
| GACTATTGCCCGGGAGATAC+TGG | + | chr4_1:68182248-68182267 | Msa0566940:CDS | 55.0% | |
| ! | AGTGGAGCATCTTTGGTCCG+GGG | - | chr4_1:68182306-68182325 | None:intergenic | 55.0% |
| CGGACCAAAGATGCTCCACT+TGG | + | chr4_1:68182306-68182325 | Msa0566940:CDS | 55.0% | |
| AGATGCTCCACTTGGAGCTG+GGG | + | chr4_1:68182314-68182333 | Msa0566940:CDS | 55.0% | |
| ! | AACTCTCAGGTGCTGTGAGG+CGG | - | chr4_1:68182441-68182460 | None:intergenic | 55.0% |
| ! | CTCAACTCTCAGGTGCTGTG+AGG | - | chr4_1:68182444-68182463 | None:intergenic | 55.0% |
| TCGCTGAGTGAACTCGACGG+GGG | - | chr4_1:68177837-68177856 | None:intergenic | 60.0% | |
| GTCGCTGAGTGAACTCGACG+GGG | - | chr4_1:68177838-68177857 | None:intergenic | 60.0% | |
| CAGGTGTACGTTAGACCGGC+AGG | + | chr4_1:68178046-68178065 | Msa0566940:intron | 60.0% | |
| TGGATCAACTGGAGCTGCGG+AGG | + | chr4_1:68178080-68178099 | Msa0566940:CDS | 60.0% | |
| GGATCAACTGGAGCTGCGGA+GGG | + | chr4_1:68178081-68178100 | Msa0566940:CDS | 60.0% | |
| AGGGTTGCAGTGTACCCTGG+AGG | + | chr4_1:68178100-68178119 | Msa0566940:CDS | 60.0% | |
| GGTCTCGGCAGATCGCAATC+CGG | - | chr4_1:68178185-68178204 | None:intergenic | 60.0% | |
| CGGATCAAGGATGAGCCGGT+TGG | + | chr4_1:68179337-68179356 | Msa0566940:CDS | 60.0% | |
| CGCCATCTCATCAGTTGGCC+TGG | - | chr4_1:68180181-68180200 | None:intergenic | 60.0% | |
| GCTCTCGCTCCACTACGACA+TGG | + | chr4_1:68180991-68181010 | Msa0566940:CDS | 60.0% | |
| AGAAGAACCTGCTCTGCGCC+AGG | + | chr4_1:68181407-68181426 | Msa0566940:CDS | 60.0% | |
| ! | TAAGTGGGGTACCCAGCCCA+TGG | - | chr4_1:68181707-68181726 | None:intergenic | 60.0% |
| GGCTGGGTACCCCACTTAGT+GGG | + | chr4_1:68181709-68181728 | Msa0566940:intron | 60.0% | |
| TGCTGGGCTGACTATTGCCC+GGG | + | chr4_1:68182239-68182258 | Msa0566940:CDS | 60.0% | |
| GATGCTCCACTTGGAGCTGG+GGG | + | chr4_1:68182315-68182334 | Msa0566940:CDS | 60.0% | |
| AGTGAACTCGACGGGGGAGG+TGG | - | chr4_1:68177831-68177850 | None:intergenic | 65.0% | |
| CTGAGTGAACTCGACGGGGG+AGG | - | chr4_1:68177834-68177853 | None:intergenic | 65.0% | |
| CGGAGGGTTGCAGTGTACCC+TGG | + | chr4_1:68178097-68178116 | Msa0566940:CDS | 65.0% | |
| TCGGCAGATCGCAATCCGGC+GGG | - | chr4_1:68178181-68178200 | None:intergenic | 65.0% | |
| CTCGGCAGATCGCAATCCGG+CGG | - | chr4_1:68178182-68178201 | None:intergenic | 65.0% | |
| CTGAAAGCCTGGCGCAGAGC+AGG | - | chr4_1:68181417-68181436 | None:intergenic | 65.0% | |
| !! | AGTACGAGGGTGCCACCAGC+TGG | - | chr4_1:68181510-68181529 | None:intergenic | 65.0% |
| GGGCTGGGTACCCCACTTAG+TGG | + | chr4_1:68181708-68181727 | Msa0566940:intron | 65.0% | |
| CGAGTTCCCCCAGCTCCAAG+TGG | - | chr4_1:68182324-68182343 | None:intergenic | 65.0% | |
| GGAGGAGAGGGTGAGGGTGG+TGG | - | chr4_1:68177774-68177793 | None:intergenic | 70.0% | |
| GGTGGAGGAGAGGGTGAGGG+TGG | - | chr4_1:68177777-68177796 | None:intergenic | 70.0% | |
| GCGGGTGGAGGAGAGGGTGA+GGG | - | chr4_1:68177780-68177799 | None:intergenic | 70.0% | |
| GAGTGCGCGGGTGGAGGAGA+GGG | - | chr4_1:68177786-68177805 | None:intergenic | 70.0% | |
| ! | AATGGCGGAGGCGAGTGCGC+GGG | - | chr4_1:68177798-68177817 | None:intergenic | 70.0% |
| ! | GAATGGCGGAGGCGAGTGCG+CGG | - | chr4_1:68177799-68177818 | None:intergenic | 70.0% |
| CGCGGGTGGAGGAGAGGGTG+AGG | - | chr4_1:68177781-68177800 | None:intergenic | 75.0% | |
| CGAGTGCGCGGGTGGAGGAG+AGG | - | chr4_1:68177787-68177806 | None:intergenic | 75.0% | |
| ! | GGAGGCGAGTGCGCGGGTGG+AGG | - | chr4_1:68177792-68177811 | None:intergenic | 80.0% |
| ! | GGCGGAGGCGAGTGCGCGGG+TGG | - | chr4_1:68177795-68177814 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 68177556 | 68182685 | 68177556 | ID=Msa0566940;Name=Msa0566940 |
| chr4_1 | mRNA | 68177556 | 68182685 | 68177556 | ID=Msa0566940-mRNA-1;Parent=Msa0566940;Name=Msa0566940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=61|1|1|1|1|1|9|296|601 |
| chr4_1 | exon | 68177556 | 68177967 | 68177556 | ID=Msa0566940-mRNA-1:exon:22421;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68178049 | 68178222 | 68178049 | ID=Msa0566940-mRNA-1:exon:22422;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68179121 | 68179441 | 68179121 | ID=Msa0566940-mRNA-1:exon:22423;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68179829 | 68179894 | 68179829 | ID=Msa0566940-mRNA-1:exon:22424;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68179976 | 68180044 | 68179976 | ID=Msa0566940-mRNA-1:exon:22425;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68180262 | 68180354 | 68180262 | ID=Msa0566940-mRNA-1:exon:22426;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68180796 | 68181019 | 68180796 | ID=Msa0566940-mRNA-1:exon:22427;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68181290 | 68181563 | 68181290 | ID=Msa0566940-mRNA-1:exon:22428;Parent=Msa0566940-mRNA-1 |
| chr4_1 | exon | 68182156 | 68182685 | 68182156 | ID=Msa0566940-mRNA-1:exon:22429;Parent=Msa0566940-mRNA-1 |
| chr4_1 | five_prime_UTR | 68177556 | 68177616 | 68177556 | ID=Msa0566940-mRNA-1:five_prime_utr;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68177617 | 68177967 | 68177617 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68178049 | 68178222 | 68178049 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68179121 | 68179441 | 68179121 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68179829 | 68179894 | 68179829 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68179976 | 68180044 | 68179976 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68180262 | 68180354 | 68180262 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68180796 | 68181019 | 68180796 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68181290 | 68181563 | 68181290 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | CDS | 68182156 | 68182389 | 68182156 | ID=Msa0566940-mRNA-1:cds;Parent=Msa0566940-mRNA-1 |
| chr4_1 | three_prime_UTR | 68182390 | 68182685 | 68182390 | ID=Msa0566940-mRNA-1:three_prime_utr;Parent=Msa0566940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
