AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0666560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0666560 MtrunA17_Chr4g0004861 89.401 1368 131 4 1 1355 1 1367 0.0 2358
Msa0666560 MtrunA17_Chr4g0004861 76.280 371 61 5 1212 1559 1125 1491 1.50e-163 535
Msa0666560 MtrunA17_Chr7g0244031 41.715 863 387 16 711 1559 722 1482 1.22e-141 474
Msa0666560 MtrunA17_Chr8g0379031 55.747 174 77 0 1 174 1 174 4.24e-59 224
Msa0666560 MtrunA17_Chr8g0379031 54.545 66 29 1 1507 1571 1145 1210 7.54e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0666560 AT2G38440.1 49.565 460 203 11 1 447 1 444 1.07e-123 422
Msa0666560 AT2G38440.1 42.632 190 86 8 1375 1559 1215 1386 5.26e-27 120
Msa0666560 AT5G01730.11 59.470 264 105 2 1 263 1 263 4.27e-98 343
Msa0666560 AT5G01730.1 59.470 264 105 2 1 263 1 263 7.65e-98 343
Msa0666560 AT5G01730.1 52.427 103 42 4 1472 1570 1071 1170 5.38e-20 97.8
Msa0666560 AT5G01730.4 59.470 264 105 2 1 263 1 263 7.65e-98 343
Msa0666560 AT5G01730.4 52.427 103 42 4 1472 1570 1071 1170 5.38e-20 97.8
Msa0666560 AT5G01730.9 59.470 264 105 2 1 263 1 263 7.87e-98 343
Msa0666560 AT5G01730.9 48.864 88 39 3 1472 1556 1071 1155 3.55e-14 79.0
Msa0666560 AT1G29170.2 57.317 164 70 0 9 172 3 166 9.97e-56 212
Msa0666560 AT1G29170.1 57.317 164 70 0 9 172 3 166 1.23e-55 212
Msa0666560 AT1G29170.3 56.970 165 71 0 9 173 3 167 1.23e-55 212
Msa0666560 AT2G34150.2 48.969 194 95 1 1 190 1 194 6.07e-55 207
Msa0666560 AT4G18600.5 47.208 197 101 2 1 194 1 197 9.71e-51 198
Msa0666560 AT4G18600.3 47.208 197 101 2 1 194 1 197 9.83e-51 198
Msa0666560 AT4G18600.1 47.208 197 101 2 1 194 1 197 1.00e-50 198
Msa0666560 AT4G18600.4 47.208 197 101 2 1 194 1 197 1.08e-50 198
Msa0666560 AT5G01730.10 57.463 134 55 2 131 263 1 133 1.12e-40 164
Msa0666560 AT5G01730.5 57.463 134 55 2 131 263 1 133 1.32e-40 164
Msa0666560 AT5G01730.5 52.427 103 42 4 1472 1570 941 1040 4.51e-20 97.8
Msa0666560 AT5G01730.3 57.463 134 55 2 131 263 1 133 1.32e-40 164
Msa0666560 AT5G01730.3 52.427 103 42 4 1472 1570 941 1040 4.51e-20 97.8
Msa0666560 AT5G01730.2 57.463 134 55 2 131 263 1 133 1.32e-40 164
Msa0666560 AT5G01730.2 52.427 103 42 4 1472 1570 941 1040 4.51e-20 97.8
Msa0666560 AT5G01730.7 57.463 134 55 2 131 263 1 133 1.36e-40 164
Msa0666560 AT5G01730.7 48.864 88 39 3 1472 1556 941 1025 2.89e-14 79.0
Msa0666560 AT5G01730.8 57.463 134 55 2 131 263 1 133 1.36e-40 164
Msa0666560 AT5G01730.8 48.864 88 39 3 1472 1556 941 1025 2.89e-14 79.0
Msa0666560 AT5G01730.6 52.427 103 42 4 1472 1570 818 917 3.86e-20 98.2
Msa0666560 AT2G34150.1 49.275 69 31 1 126 190 5 73 4.20e-13 74.7
Msa0666560 AT2G34150.5 49.275 69 31 1 126 190 5 73 4.20e-13 74.7
Msa0666560 AT2G34150.4 49.275 69 31 1 126 190 5 73 4.20e-13 74.7
Msa0666560 AT4G18600.2 47.692 65 33 1 131 194 1 65 2.73e-12 72.8

Find 400 sgRNAs with CRISPR-Local

Find 612 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTGCCATGGGTGTTTC+TGG -0.012778 4_4:-6624634 Msa0666560:CDS
TTTAGAAGTTGTAAATAAAA+TGG 0.141987 4_4:+6626469 None:intergenic
TCATTTATACACATTATTTA+TGG 0.145913 4_4:-6622639 Msa0666560:three_prime_UTR
GAAGTAAGATTTATCTTTCT+TGG 0.183524 4_4:+6626541 None:intergenic
CACCAACCCCTTCTGGAAAT+TGG 0.191369 4_4:+6627119 None:intergenic
AGGTTTGATGTGGCTGGGGC+TGG 0.208397 4_4:-6628079 Msa0666560:CDS
ATATCAAATTCCTGCTCATT+AGG 0.224018 4_4:+6627145 None:intergenic
TTGTAATCGACGTTCTTTAT+TGG 0.225938 4_4:+6626820 None:intergenic
TGAATTGCTGAATTCGTTAT+TGG 0.225942 4_4:-6630420 Msa0666560:five_prime_UTR
CCTTCCGTTGAAGGAAATTC+TGG 0.227477 4_4:-6627361 Msa0666560:CDS
TCATTTCTCTCTTGTTTGAA+TGG 0.238934 4_4:+6626740 None:intergenic
ACTTGGCAGTGGTAAATAAA+AGG 0.242015 4_4:-6622583 Msa0666560:three_prime_UTR
TTTGTCTCACCAACCCCTTC+TGG 0.243008 4_4:+6627112 None:intergenic
TTAGGAAGGGGTTCTGAATT+TGG 0.245863 4_4:+6624527 None:intergenic
AGTGATTCTTGAGTTTATTC+TGG 0.259548 4_4:-6623109 Msa0666560:exon
AATTCACAAACCCTAGAATA+TGG 0.264492 4_4:+6630437 None:intergenic
CCTGATAAGAAGTCTCAATT+TGG 0.268252 4_4:-6624742 Msa0666560:CDS
TATCAAATTCCTGCTCATTA+GGG 0.268606 4_4:+6627146 None:intergenic
CCAAATTGAGACTTCTTATC+AGG 0.268841 4_4:+6624742 None:intergenic
TACATCTGCAGAAACAATTT+CGG 0.274072 4_4:+6625437 None:intergenic
ATCTTGATCACCACTGCTTC+TGG 0.277527 4_4:+6625938 None:intergenic
CGTAATCGTATGAAGATAAA+TGG 0.278787 4_4:-6625879 Msa0666560:CDS
AGCTCCACACTTTCCATGTT+TGG 0.279837 4_4:+6623800 None:intergenic
CATTTATACACATTATTTAT+GGG 0.283786 4_4:-6622638 Msa0666560:three_prime_UTR
GAAGTCTCAATTTGGTTTGC+CGG 0.296770 4_4:-6624734 Msa0666560:CDS
ATCTGACGTAGAGGAGTTTC+TGG 0.297569 4_4:+6626577 None:intergenic
CTTCTGCCATGGGTGTTTCT+GGG 0.303554 4_4:-6624633 Msa0666560:CDS
TCAGACTCAAACTGGTTATA+AGG 0.307387 4_4:+6625198 None:intergenic
GGTTTGATGTGGCTGGGGCT+GGG 0.307427 4_4:-6628078 Msa0666560:CDS
CATTTCTCTCTTGTTTGAAT+GGG 0.310767 4_4:+6626741 None:intergenic
ATGCATGCACCGGCAGAAAT+AGG 0.311037 4_4:+6622542 None:intergenic
GATGGCGTACCTTCAATTTC+CGG 0.316126 4_4:+6626437 None:intergenic
CTTTAAAGGTTTGATGTGGC+TGG 0.319994 4_4:-6628085 Msa0666560:intron
TTGAACCACTGCAGCTTAAG+AGG 0.323470 4_4:-6623540 Msa0666560:intron
ATGATGAGTTTGAGAGAAAA+AGG 0.325235 4_4:+6628513 None:intergenic
TTGAGTCAATTCCACTTCAT+TGG 0.325243 4_4:+6625680 None:intergenic
ACTTCCATCTCTATCTCATT+TGG 0.325812 4_4:+6625522 None:intergenic
GAATCTCTTTCATCTACCTT+TGG 0.326995 4_4:+6623487 None:intergenic
AATTTGAAAACAGCTTAAAT+AGG 0.330380 4_4:-6626976 Msa0666560:CDS
ACATCTGCAGAAACAATTTC+GGG 0.331286 4_4:+6625438 None:intergenic
AACGGCATGACAGGTGAAAA+TGG 0.331547 4_4:+6624679 None:intergenic
GTTTGATGTGGCTGGGGCTG+GGG 0.334363 4_4:-6628077 Msa0666560:CDS
CATTCTTCACCACGGTCATC+TGG 0.337032 4_4:-6624988 Msa0666560:CDS
ATCATCTCTATGCGAATCTA+TGG 0.338998 4_4:+6624810 None:intergenic
ATTTGTTGATGGATTGAATC+TGG 0.339851 4_4:+6622832 None:intergenic
AAACTTACCTCGATTAATAA+TGG 0.340285 4_4:-6628254 Msa0666560:CDS
CTTTATAGATGATGCGAAAA+TGG 0.340739 4_4:-6625319 Msa0666560:CDS
TAGGGAGGGAGAAGAAGGTT+TGG 0.342661 4_4:+6626160 None:intergenic
GTCTGTATCATTGTCAGAAA+TGG 0.343288 4_4:+6626211 None:intergenic
TTCTTCTGATAAAATTTCAT+TGG 0.343326 4_4:-6626111 Msa0666560:CDS
ATCAATGCTTGTCCAGCTTC+AGG 0.344904 4_4:-6625783 Msa0666560:CDS
GCCCTGTGATCTTCCAGATT+TGG 0.349444 4_4:-6625391 Msa0666560:CDS
CACCAAGTTGGAATTGCAAA+TGG 0.351039 4_4:+6625160 None:intergenic
TATTCGGATCTGTTGACTTC+AGG 0.351912 4_4:-6626305 Msa0666560:CDS
CATTCTTTAAGTAATGTAGA+AGG 0.353179 4_4:-6623860 Msa0666560:CDS
AACTACCATGGAGTCAGAAT+TGG 0.353510 4_4:-6626903 Msa0666560:CDS
GATAGAGATGGAAGTCTATA+AGG 0.353583 4_4:-6625514 Msa0666560:CDS
AAAGTACATAATTTCAAAAC+TGG 0.353959 4_4:+6622753 None:intergenic
TCTACCTTTGGTTCTATTTG+AGG 0.358628 4_4:+6623499 None:intergenic
GCACATTCGGCAGGTGGTAT+TGG 0.361433 4_4:+6624196 None:intergenic
GTTGCCATGGCTGGTCTTGT+TGG 0.363269 4_4:-6630286 Msa0666560:CDS
CTTGAAGCTGTTGCCATGGC+TGG 0.364045 4_4:-6630295 Msa0666560:CDS
CCTGCCGAATGTGCTAATTC+TGG 0.368565 4_4:-6624187 Msa0666560:CDS
AATGCAATGCAGGGATTGAT+TGG 0.372598 4_4:-6628318 Msa0666560:intron
GCAGGTAGTATTGGTGCATA+TGG 0.375947 4_4:+6624421 None:intergenic
AATAAGTTTCAGACTCAAAC+TGG 0.378094 4_4:+6625190 None:intergenic
GAATGTGTTGGTACAGCATT+TGG 0.378548 4_4:+6627575 None:intergenic
ACATTACTTAAAGAATGATT+AGG 0.378771 4_4:+6623866 None:intergenic
GACTTCTTATCAGGCATGAT+TGG 0.379145 4_4:+6624751 None:intergenic
TCAGCAGCACGGTACAGTTC+AGG 0.379638 4_4:+6630340 None:intergenic
TTAGAAGTTGTAAATAAAAT+GGG 0.379723 4_4:+6626470 None:intergenic
AAGATCATTCCGGCCATAAC+TGG 0.384113 4_4:+6625254 None:intergenic
GTCTCTGTCTTTGATTGAGT+TGG 0.388831 4_4:+6624340 None:intergenic
GCAATTCCAACTTGGTGAAA+AGG 0.392913 4_4:-6625154 Msa0666560:CDS
CACAGGGCACCGATTTGTTA+AGG 0.393893 4_4:+6625406 None:intergenic
AAGATCGAATCCCATATTCT+AGG 0.395136 4_4:-6630448 Msa0666560:five_prime_UTR
GAAGAACCAGACTTGAATTC+AGG 0.395313 4_4:-6625996 Msa0666560:CDS
CGTATAAGATACTTCGATAT+CGG 0.397132 4_4:+6630385 None:intergenic
TGCAGGTAGCATCGCTGGTT+TGG 0.397307 4_4:+6626253 None:intergenic
GCATGATTGGCTGCATTGAT+TGG 0.402082 4_4:+6624764 None:intergenic
AACTGAAAAGGTAAAGCAAT+TGG 0.403603 4_4:+6624607 None:intergenic
GATTTGTTACAAGTTTCTAA+TGG 0.405243 4_4:-6626050 Msa0666560:CDS
AGAAGAAAGGAGCACGGATA+AGG 0.408097 4_4:-6627610 Msa0666560:CDS
AACTCTGATGTTTGAGCAGA+TGG 0.410135 4_4:+6623731 None:intergenic
TCAGATGATGCTGGTGAGGC+AGG 0.410161 4_4:-6627244 Msa0666560:CDS
TGAAGTTCCTTCACTTGAAA+AGG 0.413423 4_4:-6628536 Msa0666560:CDS
TCTTGAGTTTATTCTGGATA+GGG 0.414726 4_4:-6623103 Msa0666560:exon
TTACTTCTTCATGTAAATCA+TGG 0.415244 4_4:+6628614 None:intergenic
GTTTCCATGGGAGAGAGGTC+GGG 0.417719 4_4:+6624913 None:intergenic
GTGTCAAACCCAGAAAATTC+AGG 0.419203 4_4:+6625294 None:intergenic
GAAGAAAGGAGCACGGATAA+GGG 0.420608 4_4:-6627609 Msa0666560:CDS
GATGGACAAAGGGAATCTTT+TGG 0.421090 4_4:+6626023 None:intergenic
TGACTCTGGGAAAACATATT+CGG 0.421992 4_4:-6626321 Msa0666560:CDS
TAACAACTAGAATGACTTCA+TGG 0.422270 4_4:+6623025 None:intergenic
GATTGAGTTGGATGTTGAAA+TGG 0.423865 4_4:+6624352 None:intergenic
TCTCCATTGCATCGGAGGTA+GGG 0.425602 4_4:+6624855 None:intergenic
CCCCATTTGCAATTCCAACT+TGG 0.425768 4_4:-6625162 Msa0666560:CDS
AACTTCTAAATATTACGAAC+CGG 0.426180 4_4:-6626456 Msa0666560:CDS
TTATCAGATTCTCACTCAAC+TGG 0.427626 4_4:-6626692 Msa0666560:CDS
TAAAATTTCATTGGACAACT+TGG 0.427933 4_4:-6626102 Msa0666560:CDS
TATGAAGCTTGCTGCCATCT+TGG 0.429951 4_4:-6623288 Msa0666560:CDS
TGTTGCTTCTGAGGGAGAAA+TGG 0.432494 4_4:-6624458 Msa0666560:CDS
TATCTAGAAGGAACAGTCTA+GGG 0.435854 4_4:+6628206 None:intergenic
ACAGCTTCAAGAAGAGCTTC+AGG 0.436607 4_4:+6630307 None:intergenic
TTCTGGATAGGGTTCTCAAC+TGG 0.437067 4_4:-6623092 Msa0666560:three_prime_UTR
TTCACCACGGTCATCTGGCT+TGG 0.437486 4_4:-6624983 Msa0666560:CDS
TTTGGTTTGCCGGCTTCTGA+TGG 0.438333 4_4:-6624724 Msa0666560:CDS
GAAGCAATAACGTGACTGTC+TGG 0.438754 4_4:+6624256 None:intergenic
TTTATTAGGGAGGGAGAAGA+AGG 0.439099 4_4:+6626155 None:intergenic
CTGCTCATTAGGGGATGAAC+AGG 0.439766 4_4:+6627156 None:intergenic
GATGATGCTGTATCTGATAA+TGG 0.440461 4_4:+6625612 None:intergenic
TGTCACTTCTGAGGAAGAAA+TGG 0.440709 4_4:-6624026 Msa0666560:CDS
TTTAAAGGTTTGATGTGGCT+GGG 0.441241 4_4:-6628084 Msa0666560:intron
CTTGAGGAACGTATTGAGAA+TGG 0.441614 4_4:-6627436 Msa0666560:CDS
CCTGCTGCATTTACTCTCTC+TGG 0.442339 4_4:-6624403 Msa0666560:CDS
TTGAATGGACCTTCCGTTGA+AGG 0.444866 4_4:-6627370 Msa0666560:CDS
TGAGGTGGGAATGTCATCCT+TGG 0.444955 4_4:-6623756 Msa0666560:CDS
CTGTCCAGAATTAGCACATT+CGG 0.445271 4_4:+6624183 None:intergenic
CCTCCGATGCAATGGAGAAC+GGG 0.446281 4_4:-6624850 Msa0666560:CDS
TCAGACACTCCAGCCCTTTG+AGG 0.449021 4_4:-6623774 Msa0666560:CDS
CAGTCAGAATCTACCAGTTA+TGG 0.449657 4_4:-6625267 Msa0666560:CDS
TGAAACAGAACTGGCAATCA+AGG 0.450974 4_4:-6627008 Msa0666560:CDS
ACCAAGTTGGAATTGCAAAT+GGG 0.451179 4_4:+6625161 None:intergenic
TTCCCTGAGGACTTGTACTG+TGG 0.452427 4_4:+6627991 None:intergenic
TATTCTGTAAAAGATCATTC+CGG 0.452780 4_4:+6625244 None:intergenic
CTCCATTGCATCGGAGGTAG+GGG 0.453110 4_4:+6624856 None:intergenic
ACAAATGAACCTTAACAAAT+CGG 0.453238 4_4:-6625415 Msa0666560:CDS
TATTGCTTCTGAGGGAGAAA+TGG 0.453680 4_4:-6624242 Msa0666560:CDS
AGAAGGGGAACAGAGACAAT+TGG 0.454760 4_4:-6623843 Msa0666560:CDS
CCAGTTCTTGCTGATTTGAA+AGG 0.455918 4_4:+6625736 None:intergenic
ATGAAGATGATGAGGATAGT+TGG 0.458510 4_4:-6623132 Msa0666560:CDS
TTGAGACCTGAATTCAAGTC+TGG 0.458544 4_4:+6625990 None:intergenic
GAAGATTCAGCAGATAGTAT+AGG 0.464477 4_4:+6623980 None:intergenic
ACATTATGTATAGGCTGCTC+AGG 0.466835 4_4:+6624298 None:intergenic
GCAGCAACAGCATCAATTAG+AGG 0.467875 4_4:+6623653 None:intergenic
ATCAGGCTTACTTATCTAGA+AGG 0.471396 4_4:+6628194 None:intergenic
TGATAAGAATCTGAAGGAGC+CGG 0.478766 4_4:+6625711 None:intergenic
TTCCAAATCTGGAAGATCAC+AGG 0.479519 4_4:+6625389 None:intergenic
TGAGATGAGCAACAATCAAT+TGG 0.480611 4_4:-6625637 Msa0666560:CDS
GAAGAAGAGACTTCTGACTC+TGG 0.481673 4_4:-6626335 Msa0666560:CDS
TCATCTGATGTCGGTTTCAC+AGG 0.482436 4_4:+6627259 None:intergenic
GTGCATGGTGATGAAATAAC+TGG 0.483651 4_4:-6625963 Msa0666560:CDS
TCCACACTTTCCATGTTTGG+TGG 0.485642 4_4:+6623803 None:intergenic
AAGCCACAGTACAAGTCCTC+AGG 0.486595 4_4:-6627994 Msa0666560:CDS
CTTGGCAGTGGTAAATAAAA+GGG 0.487525 4_4:-6622582 Msa0666560:three_prime_UTR
AGTGAAGTTGTTGAGTCAAA+AGG 0.488961 4_4:-6625849 Msa0666560:CDS
GTCGCTGCAGGTAGCATCGC+TGG 0.488968 4_4:+6626248 None:intergenic
TGAATTAGCTTTCTCCAAGA+TGG 0.489115 4_4:+6623274 None:intergenic
GAAGGGGTTGGTGAGACAAA+TGG 0.490225 4_4:-6627109 Msa0666560:CDS
GAAGGGGAACAGAGACAATT+GGG 0.490740 4_4:-6623842 Msa0666560:CDS
ATACGATTACGAGGAGAAGA+TGG 0.490839 4_4:+6625891 None:intergenic
ACATTGAAAAGTCATCTCCT+AGG 0.491361 4_4:-6625362 Msa0666560:CDS
CTTCCGTTGAAGGAAATTCT+GGG 0.492648 4_4:-6627360 Msa0666560:CDS
AGATCGAATCCCATATTCTA+GGG 0.492931 4_4:-6630447 Msa0666560:five_prime_UTR
CTAGACACTACATTATGTAT+AGG 0.495125 4_4:+6624289 None:intergenic
GCTCATGTTGCCACCAAACA+TGG 0.495656 4_4:-6623813 Msa0666560:CDS
GTAAATGCAGCAGGTAGTAT+TGG 0.496289 4_4:+6624412 None:intergenic
TTCTTCGATGGATGGACAAA+GGG 0.497337 4_4:+6626013 None:intergenic
CTCCGACATTCTTCTGCCAT+GGG 0.497405 4_4:-6624643 Msa0666560:CDS
TCAGCGGGTGTAACAGATGA+AGG 0.498462 4_4:-6627058 Msa0666560:CDS
ATTCACAAACCCTAGAATAT+GGG 0.498980 4_4:+6630438 None:intergenic
GGTGTCTGATGAAACAGAAC+TGG 0.499603 4_4:-6627017 Msa0666560:CDS
TTATTGAAATAGGCTTTGGC+TGG 0.502355 4_4:-6623160 Msa0666560:intron
GCTCCGACATTCTTCTGCCA+TGG 0.502364 4_4:-6624644 Msa0666560:CDS
GATGACATTCCCACCTCAAA+GGG 0.502818 4_4:+6623761 None:intergenic
TTGATGCTAATTTGTATGCT+AGG 0.503010 4_4:+6622938 None:intergenic
GCGCTATCAACAGAAGGAAC+AGG 0.503134 4_4:+6625822 None:intergenic
CCTTTCAAATCAGCAAGAAC+TGG 0.505182 4_4:-6625736 Msa0666560:CDS
GTGAAGAAAGAGAGCCAAGA+GGG 0.505650 4_4:+6622983 None:intergenic
CCAGAATTTCCTTCAACGGA+AGG 0.505728 4_4:+6627361 None:intergenic
TGAGCAAGACATTGGAAACT+TGG 0.505916 4_4:-6622600 Msa0666560:three_prime_UTR
TAGCTACCATGGGCAGCGTT+AGG 0.506419 4_4:+6624509 None:intergenic
ACTGATGATGATTCATCTGC+AGG 0.506675 4_4:+6625012 None:intergenic
CAGGTAGTATTGGTGCATAT+GGG 0.506984 4_4:+6624422 None:intergenic
CTAGGTCGTGTAGCCACAGC+AGG 0.507666 4_4:+6623332 None:intergenic
AAGTCTGGTTCTTCGATGGA+TGG 0.510872 4_4:+6626005 None:intergenic
TTCTCCATTGCATCGGAGGT+AGG 0.512203 4_4:+6624854 None:intergenic
GTTGGACTTCTTCGCCAGCT+CGG 0.512246 4_4:-6630268 Msa0666560:CDS
ATTCTTTAAGTAATGTAGAA+GGG 0.512342 4_4:-6623859 Msa0666560:CDS
CAGTCACGTTATTGCTTCTG+AGG 0.512770 4_4:-6624251 Msa0666560:CDS
TACCATGGGCAGCGTTAGGA+AGG 0.513253 4_4:+6624513 None:intergenic
AGGTAGATGAAAGAGATTCA+TGG 0.514680 4_4:-6623483 Msa0666560:CDS
CATCAGAGTTTGAGAGTGAA+AGG 0.514737 4_4:-6623718 Msa0666560:CDS
AGCATAAGATTCCTCGTCCT+CGG 0.515945 4_4:-6623679 Msa0666560:CDS
CGAATGTGCTAATTCTGGAC+AGG 0.516698 4_4:-6624182 Msa0666560:CDS
CTCTCTTCCATGGTGGAACA+CGG 0.517546 4_4:-6630508 Msa0666560:five_prime_UTR
CTGTTCATCCCCTAATGAGC+AGG 0.517706 4_4:-6627155 Msa0666560:CDS
TTTAGGTTTATACTCATCAT+CGG 0.518573 4_4:+6626877 None:intergenic
TCCTTCAGATTCTTATCAGA+TGG 0.518790 4_4:-6625706 Msa0666560:CDS
TGGTTACATTGTTGCTTCTG+AGG 0.519243 4_4:-6624467 Msa0666560:CDS
TTATCTAGAAGGAACAGTCT+AGG 0.519804 4_4:+6628205 None:intergenic
TTCTTGAGTTTATTCTGGAT+AGG 0.520794 4_4:-6623104 Msa0666560:exon
TGTTGAAATGGTTCCACTTG+TGG 0.520810 4_4:+6624364 None:intergenic
TTTCCATGGGAGAGAGGTCG+GGG 0.521292 4_4:+6624914 None:intergenic
ACATTCCCACCTCAAAGGGC+TGG 0.521650 4_4:+6623765 None:intergenic
GACACTCCAGCCCTTTGAGG+TGG 0.522176 4_4:-6623771 Msa0666560:CDS
GCAGGTGGTATTGGAAGGAA+TGG 0.522304 4_4:+6624205 None:intergenic
GCTTATATGAGTGGTATACA+TGG 0.522969 4_4:+6622805 None:intergenic
GATTCAGCAGATAGTATAGG+AGG 0.522990 4_4:+6623983 None:intergenic
GAAAGCTAATTCAATTCGCC+AGG 0.523398 4_4:-6623264 Msa0666560:intron
CATTGCATCGGAGGTAGGGG+GGG 0.524243 4_4:+6624859 None:intergenic
CATCTATAAAGCCAGTCTGT+TGG 0.525250 4_4:+6625331 None:intergenic
GATGTCGGTTTCACAGGAAG+TGG 0.525430 4_4:+6627265 None:intergenic
TGCAAGAGGCCACAGTCTTA+CGG 0.525850 4_4:-6628581 Msa0666560:CDS
GCTACACGACCTAGGATTCA+AGG 0.526227 4_4:-6623323 Msa0666560:CDS
TCACTTTCCAACGGCATGAC+AGG 0.526730 4_4:+6624670 None:intergenic
AGTTTCAAAATACAGATAGT+AGG 0.528427 4_4:-6626391 Msa0666560:CDS
AGTTTCCATGGGAGAGAGGT+CGG 0.528491 4_4:+6624912 None:intergenic
GGTAGCATCGCTGGTTTGGT+AGG 0.529595 4_4:+6626257 None:intergenic
CCCGTTCTCCATTGCATCGG+AGG 0.529606 4_4:+6624850 None:intergenic
ATTCAAGTCTGGTTCTTCGA+TGG 0.530085 4_4:+6626001 None:intergenic
CCATTGCATCGGAGGTAGGG+GGG 0.532946 4_4:+6624858 None:intergenic
GACTCCGCTTTAAAGAATGA+TGG 0.533187 4_4:+6628031 None:intergenic
ACCATGAGAGGAAACTGAAA+AGG 0.533671 4_4:+6624595 None:intergenic
TTAAAGGTTTGATGTGGCTG+GGG 0.533712 4_4:-6628083 Msa0666560:intron
TCGTCGGACTGAGTCGCTGC+AGG 0.533786 4_4:+6626236 None:intergenic
TTGCCCGTTCTCCATTGCAT+CGG 0.534073 4_4:+6624847 None:intergenic
GCAGATAGTATAGGAGGGCA+TGG 0.534556 4_4:+6623989 None:intergenic
TATACATAATGTAGTGTCTA+GGG 0.535880 4_4:-6624287 Msa0666560:CDS
GGTTACATTGTTGCTTCTGA+GGG 0.536842 4_4:-6624466 Msa0666560:CDS
AAGAACGTCGATTACAAGCT+CGG 0.537766 4_4:-6626814 Msa0666560:CDS
CCAGAGAGAGTAAATGCAGC+AGG 0.538171 4_4:+6624403 None:intergenic
AAATCATGAGAATGAATATG+TGG 0.538298 4_4:+6626068 None:intergenic
GCTTAAGAGGGCTACTGAGC+GGG 0.538692 4_4:-6623527 Msa0666560:CDS
TCTTCTTGAAGCTGTTGCCA+TGG 0.540795 4_4:-6630299 Msa0666560:CDS
TCGGGGAGAAGAGACTTCAA+TGG 0.541077 4_4:+6624931 None:intergenic
TCTCCCCGACCTCTCTCCCA+TGG 0.541113 4_4:-6624917 Msa0666560:CDS
AAGAAGAGACTTCTGACTCT+GGG 0.541282 4_4:-6626334 Msa0666560:CDS
GACCGTGCTAGAGGGAAAGA+AGG 0.541579 4_4:-6625472 Msa0666560:CDS
GGAGCTTACTTTGAATGTGT+TGG 0.542790 4_4:+6627563 None:intergenic
CTAAAGAAAAGACAATTGAA+TGG 0.544306 4_4:-6627385 Msa0666560:CDS
CTTATATGAGTGGTATACAT+GGG 0.544917 4_4:+6622806 None:intergenic
CTCATGGTTAATGAAGCAAA+TGG 0.546460 4_4:-6624580 Msa0666560:CDS
TCTTTCTCTCTCTTCCATGG+TGG 0.546511 4_4:-6630515 Msa0666560:five_prime_UTR
CTATACATAATGTAGTGTCT+AGG 0.547332 4_4:-6624288 Msa0666560:CDS
TCCTGGCTGTTAATTTAGTG+TGG 0.547730 4_4:-6622472 Msa0666560:three_prime_UTR
ATTGTCAGAAATGGTTTCGT+CGG 0.548803 4_4:+6626220 None:intergenic
ATGTAAATCATGGAAGATCT+CGG 0.549345 4_4:+6628624 None:intergenic
GAACAAAACCTCGTTTCTAG+TGG 0.550072 4_4:-6628277 Msa0666560:CDS
TTGATGGATTGAATCTGGAC+AGG 0.551060 4_4:+6622837 None:intergenic
TTTGCTTCATTAACCATGAG+AGG 0.551276 4_4:+6624583 None:intergenic
TATTACGAACCGGAAATTGA+AGG 0.551551 4_4:-6626446 Msa0666560:CDS
ACGAAACGAGTACAGTTTAG+CGG 0.552347 4_4:-6630365 Msa0666560:CDS
TCCATTGCATCGGAGGTAGG+GGG 0.553191 4_4:+6624857 None:intergenic
GATAAGAATCTGAAGGAGCC+GGG 0.554732 4_4:+6625712 None:intergenic
TATACATTTGCTTATATGAG+TGG 0.554864 4_4:+6622796 None:intergenic
AACCAATTTCCAGAAGGGGT+TGG 0.555407 4_4:-6627121 Msa0666560:CDS
TGAACCACTGCAGCTTAAGA+GGG 0.556389 4_4:-6623539 Msa0666560:intron
GAACAAATCATACCTGAAGC+TGG 0.556480 4_4:+6625771 None:intergenic
CCATGGGCAGCGTTAGGAAG+GGG 0.556894 4_4:+6624515 None:intergenic
ATTAGAGGATTCCGAGGACG+AGG 0.557449 4_4:+6623668 None:intergenic
GATATAAACCAATTTCCAGA+AGG 0.557787 4_4:-6627127 Msa0666560:CDS
TTTCCCAGAATTTCCTTCAA+CGG 0.557887 4_4:+6627357 None:intergenic
ATTACATCAGCTGCTTCTTG+AGG 0.558419 4_4:-6627452 Msa0666560:CDS
GGATGACATTCCCACCTCAA+AGG 0.558533 4_4:+6623760 None:intergenic
AAATCAGCAAGAACTGGTCC+CGG 0.558956 4_4:-6625730 Msa0666560:CDS
ATACAAATTAGCATCAATGC+AGG 0.559304 4_4:-6622932 Msa0666560:three_prime_UTR
GTGAAAGAACAAATCTCAGC+GGG 0.560036 4_4:-6627073 Msa0666560:CDS
CTATGCGAATCTATGGAAGC+AGG 0.560154 4_4:+6624817 None:intergenic
AAGTCCAACAAGACCAGCCA+TGG 0.561533 4_4:+6630282 None:intergenic
TGACAAATGCCTATTTCTGC+CGG 0.561593 4_4:-6622551 Msa0666560:three_prime_UTR
CTAATATGTAATGCATGCAC+CGG 0.563220 4_4:+6622532 None:intergenic
TGATTTACATGAAGAAGTAA+TGG 0.563761 4_4:-6628611 Msa0666560:CDS
GGCTCGTGTTAAACAGCTTG+AGG 0.564635 4_4:-6628560 Msa0666560:CDS
ACCTCCGATGCAATGGAGAA+CGG 0.565442 4_4:-6624851 Msa0666560:CDS
TTCTTTAAGTAATGTAGAAG+GGG 0.568766 4_4:-6623858 Msa0666560:CDS
GACAATGATACAGACAGAGC+AGG 0.569803 4_4:-6626203 Msa0666560:CDS
AAGAGACTTCAATGGATCCA+TGG 0.570562 4_4:+6624939 None:intergenic
GGTTTCCAATTCTGACTCCA+TGG 0.570988 4_4:+6626898 None:intergenic
ATATAAACCAATTTCCAGAA+GGG 0.571404 4_4:-6627126 Msa0666560:CDS
TATAAACCAATTTCCAGAAG+GGG 0.571714 4_4:-6627125 Msa0666560:CDS
ACTCAGCAAGGTCACCGAGC+TGG 0.572333 4_4:+6630254 None:intergenic
TCAGATGGAATCCAATGAAG+TGG 0.572514 4_4:-6625691 Msa0666560:CDS
CATTGAAAAGTCATCTCCTA+GGG 0.573244 4_4:-6625361 Msa0666560:CDS
CACTTCGCGTGAGACAGATA+AGG 0.573653 4_4:-6622889 Msa0666560:three_prime_UTR
CCATCTTTAAAGGTTTGATG+TGG 0.574026 4_4:-6628089 Msa0666560:intron
TGATCCATCATTCTTTAAAG+CGG 0.574119 4_4:-6628035 Msa0666560:CDS
ATAATGTAGTGTCTAGGGAC+GGG 0.574333 4_4:-6624282 Msa0666560:CDS
GTCTCAGTCAGTAACTGACT+TGG 0.574746 4_4:+6623908 None:intergenic
TGATTCCACACCTCCACAAG+TGG 0.575689 4_4:-6624377 Msa0666560:CDS
AGCAGTGGTGATCAAGATGA+AGG 0.577120 4_4:-6625933 Msa0666560:CDS
CCAAGTTGGAATTGCAAATG+GGG 0.577985 4_4:+6625162 None:intergenic
CACGGTGGAGCAAAAGTCAC+AGG 0.580363 4_4:-6630490 Msa0666560:five_prime_UTR
GAATCTTCGACCGTGCTAGA+GGG 0.580705 4_4:-6625480 Msa0666560:CDS
AAGATATTGAAGTGAAAGCT+CGG 0.583028 4_4:-6626715 Msa0666560:CDS
ATCAAATTCCTGCTCATTAG+GGG 0.583112 4_4:+6627147 None:intergenic
AAAGTCTCTCCATCAGAAGC+CGG 0.583277 4_4:+6624715 None:intergenic
ACCACACTAAATTAACAGCC+AGG 0.586797 4_4:+6622471 None:intergenic
TTCCAACTTGGTGAAAAGGA+TGG 0.587525 4_4:-6625150 Msa0666560:CDS
CAGATGATGCTGGTGAGGCA+GGG 0.588486 4_4:-6627243 Msa0666560:CDS
ACCATGGGCAGCGTTAGGAA+GGG 0.589194 4_4:+6624514 None:intergenic
TGGTTCCACTTGTGGAGGTG+TGG 0.590288 4_4:+6624372 None:intergenic
TGCATGCTCGTAGCTACCAT+GGG 0.590454 4_4:+6624499 None:intergenic
GTCATGTATGAGCAAGACAT+TGG 0.590924 4_4:-6622608 Msa0666560:three_prime_UTR
TTGACTCAATCTCCTAGTCA+AGG 0.592117 4_4:-6624136 Msa0666560:CDS
GTATGATTTGTTCTACGTCA+AGG 0.592949 4_4:-6625761 Msa0666560:CDS
ATTCGGCAGGTGGTATTGGA+AGG 0.593482 4_4:+6624200 None:intergenic
CATGGATGCTTTAACTACCA+TGG 0.594133 4_4:-6626915 Msa0666560:CDS
TTTGTAAGATTACTCACTGG+AGG 0.594595 4_4:+6625576 None:intergenic
ATGCATGCTCGTAGCTACCA+TGG 0.594647 4_4:+6624498 None:intergenic
TTTCAACTTGAAGCCTGCTG+TGG 0.594994 4_4:-6623345 Msa0666560:CDS
CCAGAATTAGCACATTCGGC+AGG 0.595027 4_4:+6624187 None:intergenic
GACAATAATAGCTCATTCAG+AGG 0.595152 4_4:-6626653 Msa0666560:CDS
TCAGTATAATTACCTCGTGA+TGG 0.595417 4_4:-6624557 Msa0666560:CDS
AGAATCTTCGACCGTGCTAG+AGG 0.595706 4_4:-6625481 Msa0666560:CDS
AGTGAATTCACCTCTGAGAA+CGG 0.597580 4_4:+6622908 None:intergenic
TATGCCTCAAATAGAACCAA+AGG 0.600484 4_4:-6623503 Msa0666560:CDS
CAACTCTACACAGTATGCCA+TGG 0.600815 4_4:-6624956 Msa0666560:CDS
CCCCTTCCTAACGCTGCCCA+TGG 0.600921 4_4:-6624515 Msa0666560:CDS
TGCTCCACCGTGTTCCACCA+TGG 0.601552 4_4:+6630501 None:intergenic
CAGAATCTACCAGTTATGGC+CGG 0.601657 4_4:-6625263 Msa0666560:CDS
GTTCTTCGATGGATGGACAA+AGG 0.601931 4_4:+6626012 None:intergenic
TTTCAGTTTCCATGGGAGAG+AGG 0.602625 4_4:+6624908 None:intergenic
TATGAATCCATTATTAATCG+AGG 0.604129 4_4:+6628247 None:intergenic
CAGTGACATTGTCACTTCTG+AGG 0.604737 4_4:-6624035 Msa0666560:CDS
AAATTCTGGGAAAAGTTACA+TGG 0.605784 4_4:-6627347 Msa0666560:CDS
CACCCATGGCAGAAGAATGT+CGG 0.606181 4_4:+6624641 None:intergenic
TTTAGCTTAACTAGGCGCGC+AGG 0.606391 4_4:+6627403 None:intergenic
TAAAGAAAACTAACTCAGCA+AGG 0.608219 4_4:+6630242 None:intergenic
CAGGTGGTATTGGAAGGAAT+GGG 0.608608 4_4:+6624206 None:intergenic
CATAATGTAGTGTCTAGGGA+CGG 0.609849 4_4:-6624283 Msa0666560:CDS
TCCAAATCTGGAAGATCACA+GGG 0.610276 4_4:+6625390 None:intergenic
GACCTTCTTTCCCTCTAGCA+CGG 0.611971 4_4:+6625470 None:intergenic
GAATTAGCACATTCGGCAGG+TGG 0.612170 4_4:+6624190 None:intergenic
AGGGCGAAAATCCAACAGAC+TGG 0.612688 4_4:-6625342 Msa0666560:CDS
ATATATGAATTGAAGCAAGA+AGG 0.613376 4_4:-6625069 Msa0666560:CDS
TAATGTGTATAAATGAACAA+AGG 0.613389 4_4:+6622646 None:intergenic
TGCTGCTCACGACAAAAGCA+TGG 0.614109 4_4:-6623636 Msa0666560:intron
CTGCTGTGGCTACACGACCT+AGG 0.614997 4_4:-6623331 Msa0666560:CDS
AGCCACAGTACAAGTCCTCA+GGG 0.615676 4_4:-6627993 Msa0666560:CDS
ACACTCCAGCCCTTTGAGGT+GGG 0.616704 4_4:-6623770 Msa0666560:CDS
ATTATTGTCTGATGTCGAAG+AGG 0.618019 4_4:+6626667 None:intergenic
ATCTAGAAGGAACAGTCTAG+GGG 0.618027 4_4:+6628207 None:intergenic
AGTCACGTTATTGCTTCTGA+GGG 0.618329 4_4:-6624250 Msa0666560:CDS
GTCTCTGTCATTCCTTGACT+AGG 0.619373 4_4:+6624124 None:intergenic
TCACCAGCATCATCTGATGT+CGG 0.623702 4_4:+6627250 None:intergenic
GACATCAGATGATGCTGGTG+AGG 0.624850 4_4:-6627248 Msa0666560:CDS
CAGATAGTATAGGAGGGCAT+GGG 0.627900 4_4:+6623990 None:intergenic
CTGATGATGATTCATCTGCA+GGG 0.629051 4_4:+6625013 None:intergenic
GCCACCAAACATGGAAAGTG+TGG 0.629932 4_4:-6623804 Msa0666560:CDS
TCCATCTGATAAGAATCTGA+AGG 0.631109 4_4:+6625705 None:intergenic
AAACCGACATCAGATGATGC+TGG 0.636645 4_4:-6627253 Msa0666560:CDS
AGACATTGGAAACTTGGCAG+TGG 0.639524 4_4:-6622594 Msa0666560:three_prime_UTR
TCAGGTCTCAATGTGGTGCA+TGG 0.640634 4_4:-6625978 Msa0666560:CDS
TAGTGAGGTTGACAACTACA+TGG 0.640958 4_4:-6626933 Msa0666560:CDS
ATAACTGGATCCAGAAGCAG+TGG 0.644843 4_4:-6625948 Msa0666560:CDS
GATAGCGCTGAAAATGATGC+GGG 0.646143 4_4:-6625807 Msa0666560:CDS
ATTCAGCAGATAGTATAGGA+GGG 0.646396 4_4:+6623984 None:intergenic
TTATATGAGTGGTATACATG+GGG 0.647569 4_4:+6622807 None:intergenic
AAAGGAGCACGGATAAGGGA+CGG 0.647848 4_4:-6627605 Msa0666560:CDS
AAATCCAAATGAGATAGAGA+TGG 0.649703 4_4:-6625526 Msa0666560:CDS
TCCAGCAGAAGAAAGGAGCA+CGG 0.650742 4_4:-6627616 Msa0666560:intron
TTTGGTTTCTGTCCATCACG+AGG 0.650797 4_4:+6624545 None:intergenic
ACTATTTACATCTGACGTAG+AGG 0.652809 4_4:+6626568 None:intergenic
GACTCAAACTGGTTATAAGG+TGG 0.653073 4_4:+6625201 None:intergenic
TGGAAGTGATGAAGATGATG+AGG 0.655281 4_4:-6623140 Msa0666560:CDS
TGAAATGGTTCCACTTGTGG+AGG 0.655302 4_4:+6624367 None:intergenic
GCTAGAGGGAAAGAAGGTCG+TGG 0.655954 4_4:-6625466 Msa0666560:CDS
GAAGAAAGAGAGCCAAGAGG+GGG 0.656441 4_4:+6622985 None:intergenic
GTTAGAACAGATACGAACAA+AGG 0.657583 4_4:-6623461 Msa0666560:intron
ACGAGCATGCATCCACCACA+TGG 0.659166 4_4:-6624487 Msa0666560:CDS
CAGCGGGTGTAACAGATGAA+GGG 0.660869 4_4:-6627057 Msa0666560:CDS
GTAATGGCTACTGCTGCAAG+AGG 0.663476 4_4:-6628595 Msa0666560:CDS
GCTGTTGTCGTCAGATGTTG+AGG 0.665096 4_4:+6626763 None:intergenic
AGCTTAAGAGGGCTACTGAG+CGG 0.665256 4_4:-6623528 Msa0666560:CDS
CAATGCAGGTCCGTTCTCAG+AGG 0.672554 4_4:-6622918 Msa0666560:three_prime_UTR
CAGATGAACTACAATATGTG+AGG 0.672720 4_4:+6622712 None:intergenic
GCAATAACGTGACTGTCTGG+AGG 0.673367 4_4:+6624259 None:intergenic
GACAAATGGAGATCTTGTGA+TGG 0.674535 4_4:-6627095 Msa0666560:CDS
CGGAGCATATCACTTTCCAA+CGG 0.674955 4_4:+6624661 None:intergenic
TGTTTGAGCAGATGGATCCA+AGG 0.675542 4_4:+6623739 None:intergenic
TGAAGAAAGAGAGCCAAGAG+GGG 0.679431 4_4:+6622984 None:intergenic
AGGAGATGAAGATGAGCACG+TGG 0.679768 4_4:-6626633 Msa0666560:CDS
GCATCAATTAGAGGATTCCG+AGG 0.679955 4_4:+6623662 None:intergenic
AGAGTTTCCGCTCAAATACG+AGG 0.681707 4_4:-6625127 Msa0666560:CDS
ATAACATTACTCATAGACTG+TGG 0.683364 4_4:+6624079 None:intergenic
GCAACAATGTAACCATGTGG+TGG 0.685678 4_4:+6624475 None:intergenic
GTAAGTTTCCACTAGAAACG+AGG 0.688545 4_4:+6628269 None:intergenic
GATTCATATGAAGAATGCCG+TGG 0.689104 4_4:-6628232 Msa0666560:CDS
TGGATGCCCAGAAACACCCA+TGG 0.692311 4_4:+6624627 None:intergenic
GGTGATCAAGATGAAGGTGA+TGG 0.694299 4_4:-6625927 Msa0666560:CDS
ATCTCCAAGCCAGATGACCG+TGG 0.695279 4_4:+6624979 None:intergenic
TCTAGAAGGAACAGTCTAGG+GGG 0.695299 4_4:+6628208 None:intergenic
TTTATCTTCATACGATTACG+AGG 0.697125 4_4:+6625882 None:intergenic
GATCATCTTTATCAGCAGCA+CGG 0.697681 4_4:+6630329 None:intergenic
AAAAGATGATACTTGCCCAG+TGG 0.700020 4_4:-6626135 Msa0666560:CDS
TCTTCCATGGTGGAACACGG+TGG 0.700757 4_4:-6630505 Msa0666560:five_prime_UTR
TAACACGAGCCGTAAGACTG+TGG 0.700769 4_4:+6628572 None:intergenic
CTAGAAGGAACAGTCTAGGG+GGG 0.701141 4_4:+6628209 None:intergenic
TGATAGCGCTGAAAATGATG+CGG 0.703110 4_4:-6625808 Msa0666560:CDS
CATCAGTTCATTCTTCACCA+CGG 0.704024 4_4:-6624996 Msa0666560:CDS
CTGAGATTGAGATTTCTCAG+AGG 0.711125 4_4:+6625095 None:intergenic
TATATGAGTGGTATACATGG+GGG 0.712576 4_4:+6622808 None:intergenic
GTGACAATGTCACTGTGTGG+AGG 0.714678 4_4:+6624043 None:intergenic
CTTGAATTCAGGTCTCAATG+TGG 0.716716 4_4:-6625985 Msa0666560:CDS
TTCTGATGACGTGACTAGTG+AGG 0.725229 4_4:-6626948 Msa0666560:CDS
TGTGAAGAAAGAGAGCCAAG+AGG 0.729266 4_4:+6622982 None:intergenic
GAAGCAACAATGTAACCATG+TGG 0.737049 4_4:+6624472 None:intergenic
GAAGTGACAATGTCACTGTG+TGG 0.742225 4_4:+6624040 None:intergenic
GGTGAAAGAACAAATCTCAG+CGG 0.742554 4_4:-6627074 Msa0666560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATCCAATTATAAAA+TGG + chr4_4:6623709-6623728 None:intergenic 10.0%
!! ATAATATTAATTACACTACT+TGG - chr4_4:6623721-6623740 Msa0666560:CDS 15.0%
!! TATAGATATGATTATATAGA+TGG - chr4_4:6624219-6624238 Msa0666560:CDS 15.0%
!! TTAGAAGTTGTAAATAAAAT+GGG + chr4_4:6626542-6626561 None:intergenic 15.0%
!! TTTAGAAGTTGTAAATAAAA+TGG + chr4_4:6626543-6626562 None:intergenic 15.0%
!!! TTGTATTCAAAATTACTTTT+CGG - chr4_4:6629630-6629649 Msa0666560:intron 15.0%
!! TCATTTATACACATTATTTA+TGG - chr4_4:6630370-6630389 Msa0666560:CDS 15.0%
!! CATTTATACACATTATTTAT+GGG - chr4_4:6630371-6630390 Msa0666560:CDS 15.0%
!!! AAAGGATAATAGAATTTTTG+AGG - chr4_4:6622888-6622907 Msa0666560:three_prime_UTR 20.0%
!! GAATATAAATATGGTGAATT+TGG - chr4_4:6622988-6623007 Msa0666560:three_prime_UTR 20.0%
!!! TTGAATTTTGTTTGTTTTGA+AGG - chr4_4:6623100-6623119 Msa0666560:three_prime_UTR 20.0%
!!! CTCATTTTCTTCATTTAATT+TGG + chr4_4:6623134-6623153 None:intergenic 20.0%
!! AATTAAATGAAGAAAATGAG+TGG - chr4_4:6623134-6623153 Msa0666560:CDS 20.0%
!! TTGTTAAATAGCAGTTATAA+CGG - chr4_4:6623257-6623276 Msa0666560:intron 20.0%
!!! CGACAATATTTTGTATTATT+TGG + chr4_4:6623484-6623503 None:intergenic 20.0%
!! TACAAAATATTGTCGAATTA+CGG - chr4_4:6623489-6623508 Msa0666560:CDS 20.0%
!! CAAATTAAAAAGTAAACTGT+TGG - chr4_4:6623611-6623630 Msa0666560:intron 20.0%
!! ATTTAAAAAGACAAAACTCA+GGG + chr4_4:6624031-6624050 None:intergenic 20.0%
!! AATTTAAAAAGACAAAACTC+AGG + chr4_4:6624032-6624051 None:intergenic 20.0%
!! AGATTAAGAAAAAGAAAAGT+GGG + chr4_4:6624298-6624317 None:intergenic 20.0%
!! AAGATTAAGAAAAAGAAAAG+TGG + chr4_4:6624299-6624318 None:intergenic 20.0%
!! TAGGAAACTATATCAATAAA+TGG + chr4_4:6625085-6625104 None:intergenic 20.0%
!! AATTTGAAAACAGCTTAAAT+AGG - chr4_4:6626033-6626052 Msa0666560:CDS 20.0%
!! TTCTTCTGATAAAATTTCAT+TGG - chr4_4:6626898-6626917 Msa0666560:CDS 20.0%
!! ACATTACTTAAAGAATGATT+AGG + chr4_4:6629146-6629165 None:intergenic 20.0%
!! ATTCTTTAAGTAATGTAGAA+GGG - chr4_4:6629150-6629169 Msa0666560:intron 20.0%
!! AAAATAAAGTAAACACAGAA+AGG + chr4_4:6629776-6629795 None:intergenic 20.0%
!! ACATATTTAAGCATAAAAAC+TGG - chr4_4:6630047-6630066 Msa0666560:intron 20.0%
!! AAAGTACATAATTTCAAAAC+TGG + chr4_4:6630259-6630278 None:intergenic 20.0%
!! TAATGTGTATAAATGAACAA+AGG + chr4_4:6630366-6630385 None:intergenic 20.0%
!!! ATTTTTTTTATAATCAGTCC+TGG - chr4_4:6630520-6630539 Msa0666560:five_prime_UTR 20.0%
! AGTTGAATTAGTGATGAATT+TGG - chr4_4:6622864-6622883 Msa0666560:three_prime_UTR 25.0%
! ATTAGTGATGAATTTGGAAA+AGG - chr4_4:6622870-6622889 Msa0666560:three_prime_UTR 25.0%
!!! AGAATTTTTGAGGTATTTGA+TGG - chr4_4:6622898-6622917 Msa0666560:three_prime_UTR 25.0%
! TGTTTGGTTGAATTATGAAT+TGG - chr4_4:6622963-6622982 Msa0666560:three_prime_UTR 25.0%
! GAATTGGAGGAATATAAATA+TGG - chr4_4:6622979-6622998 Msa0666560:three_prime_UTR 25.0%
! TATAAATATGGTGAATTTGG+TGG - chr4_4:6622991-6623010 Msa0666560:three_prime_UTR 25.0%
!! AGTACTTGCTGAAATAAATA+AGG - chr4_4:6623663-6623682 Msa0666560:CDS 25.0%
! GGCTATTAAGTATTAATCTT+AGG - chr4_4:6623777-6623796 Msa0666560:CDS 25.0%
! TCATTAGATTAAGCCATAAA+GGG + chr4_4:6623842-6623861 None:intergenic 25.0%
! TTCATTAGATTAAGCCATAA+AGG + chr4_4:6623843-6623862 None:intergenic 25.0%
!! TAGAAACTTTTATCGTCATT+AGG - chr4_4:6624051-6624070 Msa0666560:CDS 25.0%
! AAGTTTAATCTATGTGAGTA+GGG - chr4_4:6624116-6624135 Msa0666560:CDS 25.0%
! TTATTACAATGTCCAAAGAA+TGG + chr4_4:6624250-6624269 None:intergenic 25.0%
! AAAATGAGAAGATAAATGCA+GGG + chr4_4:6624351-6624370 None:intergenic 25.0%
!!! TTTATCTTCTCATTTTGGTT+AGG - chr4_4:6624355-6624374 Msa0666560:CDS 25.0%
! TTACTTCTTCATGTAAATCA+TGG + chr4_4:6624398-6624417 None:intergenic 25.0%
! TGATTTACATGAAGAAGTAA+TGG - chr4_4:6624398-6624417 Msa0666560:CDS 25.0%
!!! CATTCGTCATTTTTTACTAA+TGG - chr4_4:6624516-6624535 Msa0666560:CDS 25.0%
! AGATTTATGCTGTATGTTAT+TGG - chr4_4:6624557-6624576 Msa0666560:CDS 25.0%
! AAACTTACCTCGATTAATAA+TGG - chr4_4:6624755-6624774 Msa0666560:CDS 25.0%
! TATGAATCCATTATTAATCG+AGG + chr4_4:6624765-6624784 None:intergenic 25.0%
! TTATTGATATAGTTTCCTAC+TGG - chr4_4:6625086-6625105 Msa0666560:CDS 25.0%
! ATTGTTTACAGAAGAGATTA+CGG + chr4_4:6625313-6625332 None:intergenic 25.0%
! CTAAAGAAAAGACAATTGAA+TGG - chr4_4:6625624-6625643 Msa0666560:CDS 25.0%
!! ATCATTTTATAATCAGGTGA+GGG + chr4_4:6625705-6625724 None:intergenic 25.0%
!! AATCATTTTATAATCAGGTG+AGG + chr4_4:6625706-6625725 None:intergenic 25.0%
!! TCGCAAATCATTTTATAATC+AGG + chr4_4:6625711-6625730 None:intergenic 25.0%
! ATATAAACCAATTTCCAGAA+GGG - chr4_4:6625883-6625902 Msa0666560:CDS 25.0%
!! TTTAGGTTTATACTCATCAT+CGG + chr4_4:6626135-6626154 None:intergenic 25.0%
!!! TTTTTCAAGACGCTTTTTTT+AGG + chr4_4:6626152-6626171 None:intergenic 25.0%
! GAAGTAAGATTTATCTTTCT+TGG + chr4_4:6626471-6626490 None:intergenic 25.0%
! AACTTCTAAATATTACGAAC+CGG - chr4_4:6626553-6626572 Msa0666560:CDS 25.0%
!!! TTTTGAAACTCAGCAATTTT+GGG + chr4_4:6626608-6626627 None:intergenic 25.0%
!!! ATTTTGAAACTCAGCAATTT+TGG + chr4_4:6626609-6626628 None:intergenic 25.0%
! AGTTTCAAAATACAGATAGT+AGG - chr4_4:6626618-6626637 Msa0666560:CDS 25.0%
!! GCAAGTATCATCTTTTATTA+GGG + chr4_4:6626870-6626889 None:intergenic 25.0%
! TAAAATTTCATTGGACAACT+TGG - chr4_4:6626907-6626926 Msa0666560:CDS 25.0%
! AAATCATGAGAATGAATATG+TGG + chr4_4:6626944-6626963 None:intergenic 25.0%
!!! GATTTGTTACAAGTTTCTAA+TGG - chr4_4:6626959-6626978 Msa0666560:CDS 25.0%
! ACAAATGAACCTTAACAAAT+CGG - chr4_4:6627594-6627613 Msa0666560:CDS 25.0%
!!! TCAATGTTATTTTCCAAATC+TGG + chr4_4:6627634-6627653 None:intergenic 25.0%
! TATTCTGTAAAAGATCATTC+CGG + chr4_4:6627768-6627787 None:intergenic 25.0%
! ATATATGAATTGAAGCAAGA+AGG - chr4_4:6627940-6627959 Msa0666560:intron 25.0%
! TATACATAATGTAGTGTCTA+GGG - chr4_4:6628722-6628741 Msa0666560:intron 25.0%
!! GATTGAGTCAAATTTTCTAT+AGG + chr4_4:6628864-6628883 None:intergenic 25.0%
!!! GAAAGAGTTATTTTTTCTTG+TGG + chr4_4:6629080-6629099 None:intergenic 25.0%
! CATTCTTTAAGTAATGTAGA+AGG - chr4_4:6629149-6629168 Msa0666560:intron 25.0%
! TTCTTTAAGTAATGTAGAAG+GGG - chr4_4:6629151-6629170 Msa0666560:intron 25.0%
!! TTTTCCCTTATTGTTTTCAA+AGG - chr4_4:6629603-6629622 Msa0666560:intron 25.0%
!! GATTCCTTTGAAAACAATAA+GGG + chr4_4:6629610-6629629 None:intergenic 25.0%
!! AGATTCCTTTGAAAACAATA+AGG + chr4_4:6629611-6629630 None:intergenic 25.0%
! CTAACCTTGATTATTGAAAT+AGG - chr4_4:6629839-6629858 Msa0666560:intron 25.0%
! AAAGCCTATTTCAATAATCA+AGG + chr4_4:6629846-6629865 None:intergenic 25.0%
! TTGATTATTGAAATAGGCTT+TGG - chr4_4:6629845-6629864 Msa0666560:intron 25.0%
!!! TGGTGAATATTTTGATATTC+TGG - chr4_4:6629937-6629956 Msa0666560:intron 25.0%
! TATACATTTGCTTATATGAG+TGG + chr4_4:6630216-6630235 None:intergenic 25.0%
ATTCACAAACCCTAGAATAT+GGG + chr4_4:6622574-6622593 None:intergenic 30.0%
AATTCACAAACCCTAGAATA+TGG + chr4_4:6622575-6622594 None:intergenic 30.0%
TGAATTGCTGAATTCGTTAT+TGG - chr4_4:6622589-6622608 Msa0666560:three_prime_UTR 30.0%
CGTATAAGATACTTCGATAT+CGG + chr4_4:6622627-6622646 None:intergenic 30.0%
TAAAGAAAACTAACTCAGCA+AGG + chr4_4:6622770-6622789 None:intergenic 30.0%
!!! ATTTTTGAGGTATTTGATGG+AGG - chr4_4:6622901-6622920 Msa0666560:three_prime_UTR 30.0%
!!! TTTTTGAGGTATTTGATGGA+GGG - chr4_4:6622902-6622921 Msa0666560:three_prime_UTR 30.0%
TGCTTGATTTAGTAACTGTT+TGG - chr4_4:6622947-6622966 Msa0666560:three_prime_UTR 30.0%
TTGGTTGAATTATGAATTGG+AGG - chr4_4:6622966-6622985 Msa0666560:three_prime_UTR 30.0%
! TTTTAGTGCATAGATTGGAT+TGG - chr4_4:6623157-6623176 Msa0666560:intron 30.0%
CTTTAAATGTTGAGACAACA+AGG - chr4_4:6623364-6623383 Msa0666560:intron 30.0%
ATAATTGCGATATAGTCTAG+TGG - chr4_4:6623426-6623445 Msa0666560:intron 30.0%
! CAGTTTGTTCAAATTTCACT+AGG + chr4_4:6623540-6623559 None:intergenic 30.0%
! CAATTAGTGATTGATAACAC+TGG - chr4_4:6623570-6623589 Msa0666560:intron 30.0%
! TCAGTGGACCATTTTATAAT+TGG - chr4_4:6623698-6623717 Msa0666560:CDS 30.0%
! GGTCAGTGTAATTTTTGTAT+TGG - chr4_4:6623742-6623761 Msa0666560:CDS 30.0%
TTGTATTGGAATGTGTATTG+AGG - chr4_4:6623756-6623775 Msa0666560:CDS 30.0%
!! ACCAAGAAGTTAGTTCTAAT+TGG - chr4_4:6623949-6623968 Msa0666560:CDS 30.0%
AATGTAAGGAAAGAACTTCA+GGG + chr4_4:6623983-6624002 None:intergenic 30.0%
AAATGTAAGGAAAGAACTTC+AGG + chr4_4:6623984-6624003 None:intergenic 30.0%
!! TTGTTGGCTCTAAAAATGTA+AGG + chr4_4:6623997-6624016 None:intergenic 30.0%
CTTCAAATACTGAAACTTCT+TGG + chr4_4:6624099-6624118 None:intergenic 30.0%
GAAGTTTAATCTATGTGAGT+AGG - chr4_4:6624115-6624134 Msa0666560:CDS 30.0%
TTACCACTACAATACATCAT+TGG + chr4_4:6624143-6624162 None:intergenic 30.0%
TAGATGGAAAAACCATTCTT+TGG - chr4_4:6624235-6624254 Msa0666560:CDS 30.0%
CAAAATGAGAAGATAAATGC+AGG + chr4_4:6624352-6624371 None:intergenic 30.0%
! CTGCATTTATCTTCTCATTT+TGG - chr4_4:6624350-6624369 Msa0666560:CDS 30.0%
ATGTAAATCATGGAAGATCT+CGG + chr4_4:6624388-6624407 None:intergenic 30.0%
ATGATGAGTTTGAGAGAAAA+AGG + chr4_4:6624499-6624518 None:intergenic 30.0%
!!! TCGTCATTTTTTACTAATGG+AGG - chr4_4:6624519-6624538 Msa0666560:CDS 30.0%
!! AAAGGGTATTCAAATCATGA+TGG + chr4_4:6624589-6624608 None:intergenic 30.0%
ATACCCTTTATCGTGTAAAA+TGG - chr4_4:6624600-6624619 Msa0666560:CDS 30.0%
! ACACCATTTTACACGATAAA+GGG + chr4_4:6624606-6624625 None:intergenic 30.0%
! TACACCATTTTACACGATAA+AGG + chr4_4:6624607-6624626 None:intergenic 30.0%
! CGTGTAAAATGGTGTAATTT+TGG - chr4_4:6624611-6624630 Msa0666560:CDS 30.0%
ATTCTTTCTTAATGCAATGC+AGG - chr4_4:6624681-6624700 Msa0666560:CDS 30.0%
TTCTTTCTTAATGCAATGCA+GGG - chr4_4:6624682-6624701 Msa0666560:CDS 30.0%
CCATATAAATCTGATGAATC+AGG + chr4_4:6624835-6624854 None:intergenic 30.0%
CCTGATTCATCAGATTTATA+TGG - chr4_4:6624832-6624851 Msa0666560:CDS 30.0%
TAAAGATGGCAAAAGCAAAA+AGG + chr4_4:6624909-6624928 None:intergenic 30.0%
!! TTTGCTTTTGCCATCTTTAA+AGG - chr4_4:6624910-6624929 Msa0666560:CDS 30.0%
! TGATCCATCATTCTTTAAAG+CGG - chr4_4:6624974-6624993 Msa0666560:CDS 30.0%
AAAAAGAATTCGCAAAGTCA+AGG - chr4_4:6625040-6625059 Msa0666560:CDS 30.0%
! AGCTTTATGTTGTGTGTTAT+TGG - chr4_4:6625138-6625157 Msa0666560:CDS 30.0%
TTGTTTACAGAAGAGATTAC+GGG + chr4_4:6625312-6625331 None:intergenic 30.0%
!! TTTTATTTCCAGCAGAAGAA+AGG - chr4_4:6625386-6625405 Msa0666560:CDS 30.0%
! TGCATTGATATTCAACTAGT+TGG - chr4_4:6625485-6625504 Msa0666560:CDS 30.0%
! GCATTGATATTCAACTAGTT+GGG - chr4_4:6625486-6625505 Msa0666560:CDS 30.0%
AACACCAGTCAACAATTTAA+AGG + chr4_4:6625513-6625532 None:intergenic 30.0%
!! GTCTTTTCTTTAGCTTAACT+AGG + chr4_4:6625617-6625636 None:intergenic 30.0%
! AAATTCTGGGAAAAGTTACA+TGG - chr4_4:6625662-6625681 Msa0666560:CDS 30.0%
TATCAAATTCCTGCTCATTA+GGG + chr4_4:6625866-6625885 None:intergenic 30.0%
ATATCAAATTCCTGCTCATT+AGG + chr4_4:6625867-6625886 None:intergenic 30.0%
GATATAAACCAATTTCCAGA+AGG - chr4_4:6625882-6625901 Msa0666560:CDS 30.0%
TATAAACCAATTTCCAGAAG+GGG - chr4_4:6625884-6625903 Msa0666560:CDS 30.0%
AAGCGTCTTGAAAAATCAAA+AGG - chr4_4:6626157-6626176 Msa0666560:CDS 30.0%
TTGTAATCGACGTTCTTTAT+TGG + chr4_4:6626192-6626211 None:intergenic 30.0%
! CATTTCTCTCTTGTTTGAAT+GGG + chr4_4:6626271-6626290 None:intergenic 30.0%
! TCATTTCTCTCTTGTTTGAA+TGG + chr4_4:6626272-6626291 None:intergenic 30.0%
AAGATATTGAAGTGAAAGCT+CGG - chr4_4:6626294-6626313 Msa0666560:CDS 30.0%
! GTATCATCTTTTATTAGGGA+GGG + chr4_4:6626866-6626885 None:intergenic 30.0%
! AGTATCATCTTTTATTAGGG+AGG + chr4_4:6626867-6626886 None:intergenic 30.0%
! GGCAAGTATCATCTTTTATT+AGG + chr4_4:6626871-6626890 None:intergenic 30.0%
! TTTTATCAGAAGAATCCACT+GGG + chr4_4:6626892-6626911 None:intergenic 30.0%
! ATTTTATCAGAAGAATCCAC+TGG + chr4_4:6626893-6626912 None:intergenic 30.0%
TTTATCTTCATACGATTACG+AGG + chr4_4:6627130-6627149 None:intergenic 30.0%
CGTAATCGTATGAAGATAAA+TGG - chr4_4:6627130-6627149 Msa0666560:CDS 30.0%
! GATTTTGTAAGATTACTCAC+TGG + chr4_4:6627439-6627458 None:intergenic 30.0%
AAATCCAAATGAGATAGAGA+TGG - chr4_4:6627483-6627502 Msa0666560:intron 30.0%
TACATCTGCAGAAACAATTT+CGG + chr4_4:6627575-6627594 None:intergenic 30.0%
CTTTATAGATGATGCGAAAA+TGG - chr4_4:6627690-6627709 Msa0666560:intron 30.0%
AATAAGTTTCAGACTCAAAC+TGG + chr4_4:6627822-6627841 None:intergenic 30.0%
!! AGTTTGTTTTCAGTTTCCAT+GGG + chr4_4:6628111-6628130 None:intergenic 30.0%
!! AAGTTTGTTTTCAGTTTCCA+TGG + chr4_4:6628112-6628131 None:intergenic 30.0%
AACTGAAAAGGTAAAGCAAT+TGG + chr4_4:6628405-6628424 None:intergenic 30.0%
CTAGACACTACATTATGTAT+AGG + chr4_4:6628723-6628742 None:intergenic 30.0%
CTATACATAATGTAGTGTCT+AGG - chr4_4:6628721-6628740 Msa0666560:intron 30.0%
! CAAATTTTCTATAGGAGTGA+CGG + chr4_4:6628856-6628875 None:intergenic 30.0%
ATAACATTACTCATAGACTG+TGG + chr4_4:6628933-6628952 None:intergenic 30.0%
!!! TATTTTTTCTTGTGGAGAGA+TGG + chr4_4:6629072-6629091 None:intergenic 30.0%
!! GCAAGCTTCATATTTGTTTT+TGG + chr4_4:6629713-6629732 None:intergenic 30.0%
! TTAGTTGACTCAGAAGAAAA+AGG + chr4_4:6629823-6629842 None:intergenic 30.0%
AGTGATTCTTGAGTTTATTC+TGG - chr4_4:6629900-6629919 Msa0666560:intron 30.0%
TTCTTGAGTTTATTCTGGAT+AGG - chr4_4:6629905-6629924 Msa0666560:intron 30.0%
TCTTGAGTTTATTCTGGATA+GGG - chr4_4:6629906-6629925 Msa0666560:intron 30.0%
!!! TTCTGGTTTTGTCTTTGAAT+CGG - chr4_4:6629954-6629973 Msa0666560:intron 30.0%
TAACAACTAGAATGACTTCA+TGG + chr4_4:6629987-6630006 None:intergenic 30.0%
! TTGATGCTAATTTGTATGCT+AGG + chr4_4:6630074-6630093 None:intergenic 30.0%
ATACAAATTAGCATCAATGC+AGG - chr4_4:6630077-6630096 Msa0666560:intron 30.0%
!! ATTTGTTGATGGATTGAATC+TGG + chr4_4:6630180-6630199 None:intergenic 30.0%
TTATATGAGTGGTATACATG+GGG + chr4_4:6630205-6630224 None:intergenic 30.0%
CTTATATGAGTGGTATACAT+GGG + chr4_4:6630206-6630225 None:intergenic 30.0%
! CACTAATGATTTTGCTACAT+TGG + chr4_4:6630326-6630345 None:intergenic 30.0%
! TTTTCTTTCTCTCTCTTCCA+TGG - chr4_4:6622491-6622510 Msa0666560:three_prime_UTR 35.0%
AAGATCGAATCCCATATTCT+AGG - chr4_4:6622561-6622580 Msa0666560:three_prime_UTR 35.0%
AGATCGAATCCCATATTCTA+GGG - chr4_4:6622562-6622581 Msa0666560:three_prime_UTR 35.0%
!!! AGTGGTTTTAGTGCATAGAT+TGG - chr4_4:6623152-6623171 Msa0666560:intron 35.0%
GAGATAACAAAGTTCCTGAT+AGG - chr4_4:6623222-6623241 Msa0666560:intron 35.0%
ACAAAGTTCCTGATAGGTTT+AGG - chr4_4:6623228-6623247 Msa0666560:intron 35.0%
AACACTAACCTAAACCTATC+AGG + chr4_4:6623239-6623258 None:intergenic 35.0%
TTAGTCTGGATTTGATTGAC+TGG - chr4_4:6623329-6623348 Msa0666560:CDS 35.0%
!! GTGATTGATAACACTGGTTT+AGG - chr4_4:6623576-6623595 Msa0666560:intron 35.0%
! GGCAAGATACATGCATTTTT+CGG + chr4_4:6623887-6623906 None:intergenic 35.0%
GAAAAATGCATGTATCTTGC+CGG - chr4_4:6623886-6623905 Msa0666560:CDS 35.0%
GCCAATTAGAACTAACTTCT+TGG + chr4_4:6623953-6623972 None:intergenic 35.0%
ATGTAAGGAAAGAACTTCAG+GGG + chr4_4:6623982-6624001 None:intergenic 35.0%
TGATGTATTGTAGTGGTAAC+TGG - chr4_4:6624144-6624163 Msa0666560:CDS 35.0%
! GATGGTTAGAGTATTTACGA+GGG - chr4_4:6624192-6624211 Msa0666560:CDS 35.0%
TGAAGTTCCTTCACTTGAAA+AGG - chr4_4:6624473-6624492 Msa0666560:CDS 35.0%
!!! AAAAAGGCCTTTTCAAGTGA+AGG + chr4_4:6624483-6624502 None:intergenic 35.0%
AAAGTCACCATTACACCTAA+CGG + chr4_4:6624649-6624668 None:intergenic 35.0%
TATCTAGAAGGAACAGTCTA+GGG + chr4_4:6624806-6624825 None:intergenic 35.0%
TTATCTAGAAGGAACAGTCT+AGG + chr4_4:6624807-6624826 None:intergenic 35.0%
ATCAGGCTTACTTATCTAGA+AGG + chr4_4:6624818-6624837 None:intergenic 35.0%
! CCACATCAAACCTTTAAAGA+TGG + chr4_4:6624923-6624942 None:intergenic 35.0%
! CCATCTTTAAAGGTTTGATG+TGG - chr4_4:6624920-6624939 Msa0666560:CDS 35.0%
TTTAAAGGTTTGATGTGGCT+GGG - chr4_4:6624925-6624944 Msa0666560:CDS 35.0%
TAGGATCACACATTTACAAC+AGG + chr4_4:6625115-6625134 None:intergenic 35.0%
CACACAACATAAAGCTCATT+AGG + chr4_4:6625134-6625153 None:intergenic 35.0%
! TTATGTTGTGTGTTATTGGC+TGG - chr4_4:6625142-6625161 Msa0666560:CDS 35.0%
! TATGTTGTGTGTTATTGGCT+GGG - chr4_4:6625143-6625162 Msa0666560:CDS 35.0%
!!! TGCTTTTTCTTGTTCATTCC+AGG - chr4_4:6625275-6625294 Msa0666560:CDS 35.0%
!! GCTTTTTCTTGTTCATTCCA+GGG - chr4_4:6625276-6625295 Msa0666560:CDS 35.0%
TGTTTACAGAAGAGATTACG+GGG + chr4_4:6625311-6625330 None:intergenic 35.0%
! AAGCTCCAATCATTTTGTTG+TGG - chr4_4:6625462-6625481 Msa0666560:CDS 35.0%
ATGCACCACAACAAAATGAT+TGG + chr4_4:6625470-6625489 None:intergenic 35.0%
TTTCCCAGAATTTCCTTCAA+CGG + chr4_4:6625655-6625674 None:intergenic 35.0%
ATCAAATTCCTGCTCATTAG+GGG + chr4_4:6625865-6625884 None:intergenic 35.0%
! AGGGTCTTTTAATGATGTCA+AGG - chr4_4:6625971-6625990 Msa0666560:CDS 35.0%
TTATCAGATTCTCACTCAAC+TGG - chr4_4:6626317-6626336 Msa0666560:CDS 35.0%
ATTATTGTCTGATGTCGAAG+AGG + chr4_4:6626345-6626364 None:intergenic 35.0%
GACAATAATAGCTCATTCAG+AGG - chr4_4:6626356-6626375 Msa0666560:CDS 35.0%
ACTATTTACATCTGACGTAG+AGG + chr4_4:6626444-6626463 None:intergenic 35.0%
TATTACGAACCGGAAATTGA+AGG - chr4_4:6626563-6626582 Msa0666560:CDS 35.0%
! TGACTCTGGGAAAACATATT+CGG - chr4_4:6626688-6626707 Msa0666560:CDS 35.0%
ATTGTCAGAAATGGTTTCGT+CGG + chr4_4:6626792-6626811 None:intergenic 35.0%
GTCTGTATCATTGTCAGAAA+TGG + chr4_4:6626801-6626820 None:intergenic 35.0%
AGTGAAGTTGTTGAGTCAAA+AGG - chr4_4:6627160-6627179 Msa0666560:CDS 35.0%
!! GTATGATTTGTTCTACGTCA+AGG - chr4_4:6627248-6627267 Msa0666560:CDS 35.0%
TCCTTCAGATTCTTATCAGA+TGG - chr4_4:6627303-6627322 Msa0666560:CDS 35.0%
TCCATCTGATAAGAATCTGA+AGG + chr4_4:6627307-6627326 None:intergenic 35.0%
TTGAGTCAATTCCACTTCAT+TGG + chr4_4:6627332-6627351 None:intergenic 35.0%
!! GGAATTGACTCAAGTTTTCA+TGG - chr4_4:6627339-6627358 Msa0666560:CDS 35.0%
TGAGATGAGCAACAATCAAT+TGG - chr4_4:6627372-6627391 Msa0666560:CDS 35.0%
GATGATGCTGTATCTGATAA+TGG + chr4_4:6627400-6627419 None:intergenic 35.0%
TTTGTAAGATTACTCACTGG+AGG + chr4_4:6627436-6627455 None:intergenic 35.0%
ACTTCCATCTCTATCTCATT+TGG + chr4_4:6627490-6627509 None:intergenic 35.0%
GATAGAGATGGAAGTCTATA+AGG - chr4_4:6627495-6627514 Msa0666560:intron 35.0%
ACATCTGCAGAAACAATTTC+GGG + chr4_4:6627574-6627593 None:intergenic 35.0%
ACATTGAAAAGTCATCTCCT+AGG - chr4_4:6627647-6627666 Msa0666560:intron 35.0%
CATTGAAAAGTCATCTCCTA+GGG - chr4_4:6627648-6627667 Msa0666560:intron 35.0%
! AAAATGGTGCCTGAATTTTC+TGG - chr4_4:6627706-6627725 Msa0666560:intron 35.0%
! AAATGGTGCCTGAATTTTCT+GGG - chr4_4:6627707-6627726 Msa0666560:intron 35.0%
! AATTTTCTGGGTTTGACACT+CGG - chr4_4:6627719-6627738 Msa0666560:intron 35.0%
TCAGACTCAAACTGGTTATA+AGG + chr4_4:6627814-6627833 None:intergenic 35.0%
! ACCAAGTTGGAATTGCAAAT+GGG + chr4_4:6627851-6627870 None:intergenic 35.0%
! AAGTTTTCCTCGTATTTGAG+CGG + chr4_4:6627892-6627911 None:intergenic 35.0%
ATCATCTCTATGCGAATCTA+TGG + chr4_4:6628202-6628221 None:intergenic 35.0%
CCAAATTGAGACTTCTTATC+AGG + chr4_4:6628270-6628289 None:intergenic 35.0%
CCTGATAAGAAGTCTCAATT+TGG - chr4_4:6628267-6628286 Msa0666560:CDS 35.0%
TTTGCTTCATTAACCATGAG+AGG + chr4_4:6628429-6628448 None:intergenic 35.0%
CTCATGGTTAATGAAGCAAA+TGG - chr4_4:6628429-6628448 Msa0666560:intron 35.0%
TCAGTATAATTACCTCGTGA+TGG - chr4_4:6628452-6628471 Msa0666560:intron 35.0%
!! GATTGAGTTGGATGTTGAAA+TGG + chr4_4:6628660-6628679 None:intergenic 35.0%
ATTCAGCAGATAGTATAGGA+GGG + chr4_4:6629028-6629047 None:intergenic 35.0%
GAAGATTCAGCAGATAGTAT+AGG + chr4_4:6629032-6629051 None:intergenic 35.0%
TATGCCTCAAATAGAACCAA+AGG - chr4_4:6629506-6629525 Msa0666560:intron 35.0%
!! TCTACCTTTGGTTCTATTTG+AGG + chr4_4:6629513-6629532 None:intergenic 35.0%
GAATCTCTTTCATCTACCTT+TGG + chr4_4:6629525-6629544 None:intergenic 35.0%
AGGTAGATGAAAGAGATTCA+TGG - chr4_4:6629526-6629545 Msa0666560:intron 35.0%
GTTAGAACAGATACGAACAA+AGG - chr4_4:6629548-6629567 Msa0666560:intron 35.0%
!! TGAATTAGCTTTCTCCAAGA+TGG + chr4_4:6629738-6629757 None:intergenic 35.0%
GACTCAGAAGAAAAAGGATA+TGG + chr4_4:6629817-6629836 None:intergenic 35.0%
! TTATTGAAATAGGCTTTGGC+TGG - chr4_4:6629849-6629868 Msa0666560:intron 35.0%
ATGAAGATGATGAGGATAGT+TGG - chr4_4:6629877-6629896 Msa0666560:intron 35.0%
!!! TCTGGTTTTGTCTTTGAATC+GGG - chr4_4:6629955-6629974 Msa0666560:intron 35.0%
TATATGAGTGGTATACATGG+GGG + chr4_4:6630204-6630223 None:intergenic 35.0%
GCTTATATGAGTGGTATACA+TGG + chr4_4:6630207-6630226 None:intergenic 35.0%
CAGATGAACTACAATATGTG+AGG + chr4_4:6630300-6630319 None:intergenic 35.0%
ACTTGGCAGTGGTAAATAAA+AGG - chr4_4:6630426-6630445 Msa0666560:five_prime_UTR 35.0%
CTTGGCAGTGGTAAATAAAA+GGG - chr4_4:6630427-6630446 Msa0666560:five_prime_UTR 35.0%
CTAATATGTAATGCATGCAC+CGG + chr4_4:6630480-6630499 None:intergenic 35.0%
ACGAAACGAGTACAGTTTAG+CGG - chr4_4:6622644-6622663 Msa0666560:three_prime_UTR 40.0%
GATCATCTTTATCAGCAGCA+CGG + chr4_4:6622683-6622702 None:intergenic 40.0%
!! GTGCATAGATTGGATTGGTT+TGG - chr4_4:6623162-6623181 Msa0666560:intron 40.0%
!! AGATTGGATTGGTTTGGACA+TGG - chr4_4:6623168-6623187 Msa0666560:intron 40.0%
ATAACGGCGTTATAGTGAAG+TGG - chr4_4:6623273-6623292 Msa0666560:CDS 40.0%
GTGCACAGATTGTATTAGTC+TGG - chr4_4:6623315-6623334 Msa0666560:CDS 40.0%
AGACAACAAGGTTCCTGATA+GGG - chr4_4:6623376-6623395 Msa0666560:intron 40.0%
AAGGAGATGATGCAATTCAG+TGG - chr4_4:6623682-6623701 Msa0666560:CDS 40.0%
TGCCACAAATATCACAACTC+CGG + chr4_4:6623908-6623927 None:intergenic 40.0%
AAAAGACAAAACTCAGGGAC+AGG + chr4_4:6624026-6624045 None:intergenic 40.0%
GGACCAATGATGTATTGTAG+TGG - chr4_4:6624137-6624156 Msa0666560:CDS 40.0%
TGTAGTGGTAACTGGATACT+TGG - chr4_4:6624152-6624171 Msa0666560:CDS 40.0%
AACTGGATACTTGGAATTCC+AGG - chr4_4:6624161-6624180 Msa0666560:CDS 40.0%
ACTGGATACTTGGAATTCCA+GGG - chr4_4:6624162-6624181 Msa0666560:CDS 40.0%
! GGATGGTTAGAGTATTTACG+AGG - chr4_4:6624191-6624210 Msa0666560:CDS 40.0%
!! TGGTTTAAGTTGTAGCCGTT+AGG - chr4_4:6624631-6624650 Msa0666560:CDS 40.0%
AATGCAATGCAGGGATTGAT+TGG - chr4_4:6624691-6624710 Msa0666560:CDS 40.0%
! GAACAAAACCTCGTTTCTAG+TGG - chr4_4:6624732-6624751 Msa0666560:CDS 40.0%
GTAAGTTTCCACTAGAAACG+AGG + chr4_4:6624743-6624762 None:intergenic 40.0%
GATTCATATGAAGAATGCCG+TGG - chr4_4:6624777-6624796 Msa0666560:CDS 40.0%
ATCTAGAAGGAACAGTCTAG+GGG + chr4_4:6624805-6624824 None:intergenic 40.0%
! CTTTAAAGGTTTGATGTGGC+TGG - chr4_4:6624924-6624943 Msa0666560:CDS 40.0%
TTAAAGGTTTGATGTGGCTG+GGG - chr4_4:6624926-6624945 Msa0666560:CDS 40.0%
!! GACTCCGCTTTAAAGAATGA+TGG + chr4_4:6624981-6625000 None:intergenic 40.0%
!!! TGCGAATTCTTTTTTCCCTG+AGG + chr4_4:6625034-6625053 None:intergenic 40.0%
ATTTACAACAGGTCTCCAGT+AGG + chr4_4:6625104-6625123 None:intergenic 40.0%
GTTTACAGAAGAGATTACGG+GGG + chr4_4:6625310-6625329 None:intergenic 40.0%
! GAATGTGTTGGTACAGCATT+TGG + chr4_4:6625437-6625456 None:intergenic 40.0%
GGAGCTTACTTTGAATGTGT+TGG + chr4_4:6625449-6625468 None:intergenic 40.0%
GGGTCCTTTAAATTGTTGAC+TGG - chr4_4:6625506-6625525 Msa0666560:CDS 40.0%
ATTACATCAGCTGCTTCTTG+AGG - chr4_4:6625557-6625576 Msa0666560:CDS 40.0%
CTTGAGGAACGTATTGAGAA+TGG - chr4_4:6625573-6625592 Msa0666560:CDS 40.0%
CTTCCGTTGAAGGAAATTCT+GGG - chr4_4:6625649-6625668 Msa0666560:CDS 40.0%
! AGTCCTTTGAAAAAGTCGAC+TGG - chr4_4:6625816-6625835 Msa0666560:CDS 40.0%
!!! CTTCCAGTCGACTTTTTCAA+AGG + chr4_4:6625822-6625841 None:intergenic 40.0%
GACAAATGGAGATCTTGTGA+TGG - chr4_4:6625914-6625933 Msa0666560:CDS 40.0%
GGTGAAAGAACAAATCTCAG+CGG - chr4_4:6625935-6625954 Msa0666560:CDS 40.0%
GTGAAAGAACAAATCTCAGC+GGG - chr4_4:6625936-6625955 Msa0666560:CDS 40.0%
TGAAACAGAACTGGCAATCA+AGG - chr4_4:6626001-6626020 Msa0666560:CDS 40.0%
TAGTGAGGTTGACAACTACA+TGG - chr4_4:6626076-6626095 Msa0666560:CDS 40.0%
CATGGATGCTTTAACTACCA+TGG - chr4_4:6626094-6626113 Msa0666560:CDS 40.0%
AACTACCATGGAGTCAGAAT+TGG - chr4_4:6626106-6626125 Msa0666560:CDS 40.0%
! AAGAACGTCGATTACAAGCT+CGG - chr4_4:6626195-6626214 Msa0666560:CDS 40.0%
AAGAAGAGACTTCTGACTCT+GGG - chr4_4:6626675-6626694 Msa0666560:CDS 40.0%
!! TATTCGGATCTGTTGACTTC+AGG - chr4_4:6626704-6626723 Msa0666560:CDS 40.0%
TTTATTAGGGAGGGAGAAGA+AGG + chr4_4:6626857-6626876 None:intergenic 40.0%
AAAAGATGATACTTGCCCAG+TGG - chr4_4:6626874-6626893 Msa0666560:CDS 40.0%
! GATGGACAAAGGGAATCTTT+TGG + chr4_4:6626989-6627008 None:intergenic 40.0%
TTCTTCGATGGATGGACAAA+GGG + chr4_4:6626999-6627018 None:intergenic 40.0%
!! ATTCAAGTCTGGTTCTTCGA+TGG + chr4_4:6627011-6627030 None:intergenic 40.0%
GAAGAACCAGACTTGAATTC+AGG - chr4_4:6627013-6627032 Msa0666560:CDS 40.0%
TTGAGACCTGAATTCAAGTC+TGG + chr4_4:6627022-6627041 None:intergenic 40.0%
CTTGAATTCAGGTCTCAATG+TGG - chr4_4:6627024-6627043 Msa0666560:CDS 40.0%
! GTGCATGGTGATGAAATAAC+TGG - chr4_4:6627046-6627065 Msa0666560:CDS 40.0%
ATACGATTACGAGGAGAAGA+TGG + chr4_4:6627121-6627140 None:intergenic 40.0%
! TTTTCAGCGCTATCAACAGA+AGG + chr4_4:6627196-6627215 None:intergenic 40.0%
! TGATAGCGCTGAAAATGATG+CGG - chr4_4:6627201-6627220 Msa0666560:CDS 40.0%
GAACAAATCATACCTGAAGC+TGG + chr4_4:6627241-6627260 None:intergenic 40.0%
!! CCAGTTCTTGCTGATTTGAA+AGG + chr4_4:6627276-6627295 None:intergenic 40.0%
CCTTTCAAATCAGCAAGAAC+TGG - chr4_4:6627273-6627292 Msa0666560:CDS 40.0%
TGATAAGAATCTGAAGGAGC+CGG + chr4_4:6627301-6627320 None:intergenic 40.0%
TCAGATGGAATCCAATGAAG+TGG - chr4_4:6627318-6627337 Msa0666560:CDS 40.0%
TCCAAATCTGGAAGATCACA+GGG + chr4_4:6627622-6627641 None:intergenic 40.0%
TTCCAAATCTGGAAGATCAC+AGG + chr4_4:6627623-6627642 None:intergenic 40.0%
CATCTATAAAGCCAGTCTGT+TGG + chr4_4:6627681-6627700 None:intergenic 40.0%
GTGTCAAACCCAGAAAATTC+AGG + chr4_4:6627718-6627737 None:intergenic 40.0%
CAGTCAGAATCTACCAGTTA+TGG - chr4_4:6627742-6627761 Msa0666560:intron 40.0%
GACTCAAACTGGTTATAAGG+TGG + chr4_4:6627811-6627830 None:intergenic 40.0%
! CCAAGTTGGAATTGCAAATG+GGG + chr4_4:6627850-6627869 None:intergenic 40.0%
! CACCAAGTTGGAATTGCAAA+TGG + chr4_4:6627852-6627871 None:intergenic 40.0%
! GCAATTCCAACTTGGTGAAA+AGG - chr4_4:6627855-6627874 Msa0666560:intron 40.0%
! TTCCAACTTGGTGAAAAGGA+TGG - chr4_4:6627859-6627878 Msa0666560:intron 40.0%
CTGAGATTGAGATTTCTCAG+AGG + chr4_4:6627917-6627936 None:intergenic 40.0%
! CTGATGATGATTCATCTGCA+GGG + chr4_4:6627999-6628018 None:intergenic 40.0%
! ACTGATGATGATTCATCTGC+AGG + chr4_4:6628000-6628019 None:intergenic 40.0%
CATCAGTTCATTCTTCACCA+CGG - chr4_4:6628013-6628032 Msa0666560:CDS 40.0%
AAGAGACTTCAATGGATCCA+TGG + chr4_4:6628073-6628092 None:intergenic 40.0%
GACTTCTTATCAGGCATGAT+TGG + chr4_4:6628261-6628280 None:intergenic 40.0%
!! GAAGTCTCAATTTGGTTTGC+CGG - chr4_4:6628275-6628294 Msa0666560:CDS 40.0%
! ACCTTTTCAGTTTCCTCTCA+TGG - chr4_4:6628413-6628432 Msa0666560:intron 40.0%
ACCATGAGAGGAAACTGAAA+AGG + chr4_4:6628417-6628436 None:intergenic 40.0%
!! TTAGGAAGGGGTTCTGAATT+TGG + chr4_4:6628485-6628504 None:intergenic 40.0%
GAAGCAACAATGTAACCATG+TGG + chr4_4:6628540-6628559 None:intergenic 40.0%
! TGGTTACATTGTTGCTTCTG+AGG - chr4_4:6628542-6628561 Msa0666560:CDS 40.0%
! GGTTACATTGTTGCTTCTGA+GGG - chr4_4:6628543-6628562 Msa0666560:CDS 40.0%
!! CAGGTAGTATTGGTGCATAT+GGG + chr4_4:6628590-6628609 None:intergenic 40.0%
GTAAATGCAGCAGGTAGTAT+TGG + chr4_4:6628600-6628619 None:intergenic 40.0%
TGTTGAAATGGTTCCACTTG+TGG + chr4_4:6628648-6628667 None:intergenic 40.0%
GTCTCTGTCTTTGATTGAGT+TGG + chr4_4:6628672-6628691 None:intergenic 40.0%
ACATTATGTATAGGCTGCTC+AGG + chr4_4:6628714-6628733 None:intergenic 40.0%
CATAATGTAGTGTCTAGGGA+CGG - chr4_4:6628726-6628745 Msa0666560:intron 40.0%
ATAATGTAGTGTCTAGGGAC+GGG - chr4_4:6628727-6628746 Msa0666560:intron 40.0%
AGTCACGTTATTGCTTCTGA+GGG - chr4_4:6628759-6628778 Msa0666560:intron 40.0%
! TATTGCTTCTGAGGGAGAAA+TGG - chr4_4:6628767-6628786 Msa0666560:intron 40.0%
CTGTCCAGAATTAGCACATT+CGG + chr4_4:6628829-6628848 None:intergenic 40.0%
TTGACTCAATCTCCTAGTCA+AGG - chr4_4:6628873-6628892 Msa0666560:intron 40.0%
! TGTCACTTCTGAGGAAGAAA+TGG - chr4_4:6628983-6629002 Msa0666560:intron 40.0%
GATTCAGCAGATAGTATAGG+AGG + chr4_4:6629029-6629048 None:intergenic 40.0%
AACTCTGATGTTTGAGCAGA+TGG + chr4_4:6629281-6629300 None:intergenic 40.0%
CATCAGAGTTTGAGAGTGAA+AGG - chr4_4:6629291-6629310 Msa0666560:intron 40.0%
!! GCTTCAAGTTGAAAGACTGA+GGG + chr4_4:6629658-6629677 None:intergenic 40.0%
!! GTTTTTGGACCTTGAATCCT+AGG + chr4_4:6629698-6629717 None:intergenic 40.0%
GAAAGCTAATTCAATTCGCC+AGG - chr4_4:6629745-6629764 Msa0666560:intron 40.0%
TGGAAGTGATGAAGATGATG+AGG - chr4_4:6629869-6629888 Msa0666560:intron 40.0%
! AGTGAATTCACCTCTGAGAA+CGG + chr4_4:6630104-6630123 None:intergenic 40.0%
!! TTGATGGATTGAATCTGGAC+AGG + chr4_4:6630175-6630194 None:intergenic 40.0%
!! TACATGGGGGTATTTGTTGA+TGG + chr4_4:6630191-6630210 None:intergenic 40.0%
GTCATGTATGAGCAAGACAT+TGG - chr4_4:6630401-6630420 Msa0666560:exon 40.0%
TGAGCAAGACATTGGAAACT+TGG - chr4_4:6630409-6630428 Msa0666560:exon 40.0%
!! TGACAAATGCCTATTTCTGC+CGG - chr4_4:6630458-6630477 Msa0666560:five_prime_UTR 40.0%
TCCTGGCTGTTAATTTAGTG+TGG - chr4_4:6630537-6630556 Msa0666560:five_prime_UTR 40.0%
ACCACACTAAATTAACAGCC+AGG + chr4_4:6630541-6630560 None:intergenic 40.0%
TCTTTCTCTCTCTTCCATGG+TGG - chr4_4:6622494-6622513 Msa0666560:three_prime_UTR 45.0%
ACAGCTTCAAGAAGAGCTTC+AGG + chr4_4:6622705-6622724 None:intergenic 45.0%
TCTTCTTGAAGCTGTTGCCA+TGG - chr4_4:6622710-6622729 Msa0666560:three_prime_UTR 45.0%
GAGACAACAAGGTTCCTGAT+AGG - chr4_4:6623375-6623394 Msa0666560:intron 45.0%
ACAAGGTTCCTGATAGGGTT+AGG - chr4_4:6623381-6623400 Msa0666560:intron 45.0%
! AGGCCAGTGTTGCTAAATAG+CGG - chr4_4:6623401-6623420 Msa0666560:intron 45.0%
TAGCCGCTATTTAGCAACAC+TGG + chr4_4:6623407-6623426 None:intergenic 45.0%
TGCCGGAGTTGTGATATTTG+TGG - chr4_4:6623903-6623922 Msa0666560:CDS 45.0%
CAGGGACAGGTGAAAATTGT+TGG + chr4_4:6624013-6624032 None:intergenic 45.0%
!! AGGTGCTGTTAAGTACTGCT+AGG - chr4_4:6624071-6624090 Msa0666560:CDS 45.0%
ATACTTGGAATTCCAGGGTG+AGG - chr4_4:6624167-6624186 Msa0666560:CDS 45.0%
TACTTGGAATTCCAGGGTGA+GGG - chr4_4:6624168-6624187 Msa0666560:CDS 45.0%
GTTGTAGCCGTTAGGTGTAA+TGG - chr4_4:6624639-6624658 Msa0666560:CDS 45.0%
TCTAGAAGGAACAGTCTAGG+GGG + chr4_4:6624804-6624823 None:intergenic 45.0%
TTGTCTGCTTGTAGCACGTA+TGG + chr4_4:6625244-6625263 None:intergenic 45.0%
GCTACAAGCAGACAAGTGTT+TGG - chr4_4:6625249-6625268 Msa0666560:CDS 45.0%
! AGAAGAAAGGAGCACGGATA+AGG - chr4_4:6625399-6625418 Msa0666560:CDS 45.0%
! GAAGAAAGGAGCACGGATAA+GGG - chr4_4:6625400-6625419 Msa0666560:CDS 45.0%
GCAGCTGATGTAATCTGCAA+TGG + chr4_4:6625551-6625570 None:intergenic 45.0%
TTGAATGGACCTTCCGTTGA+AGG - chr4_4:6625639-6625658 Msa0666560:CDS 45.0%
CCAGAATTTCCTTCAACGGA+AGG + chr4_4:6625651-6625670 None:intergenic 45.0%
CCTTCCGTTGAAGGAAATTC+TGG - chr4_4:6625648-6625667 Msa0666560:CDS 45.0%
!! TCATCTGATGTCGGTTTCAC+AGG + chr4_4:6625753-6625772 None:intergenic 45.0%
AAACCGACATCAGATGATGC+TGG - chr4_4:6625756-6625775 Msa0666560:CDS 45.0%
TCACCAGCATCATCTGATGT+CGG + chr4_4:6625762-6625781 None:intergenic 45.0%
AACCAATTTCCAGAAGGGGT+TGG - chr4_4:6625888-6625907 Msa0666560:CDS 45.0%
GGTGTCTGATGAAACAGAAC+TGG - chr4_4:6625992-6626011 Msa0666560:CDS 45.0%
! TTCTGATGACGTGACTAGTG+AGG - chr4_4:6626061-6626080 Msa0666560:CDS 45.0%
GGTTTCCAATTCTGACTCCA+TGG + chr4_4:6626114-6626133 None:intergenic 45.0%
ATCTGACGTAGAGGAGTTTC+TGG + chr4_4:6626435-6626454 None:intergenic 45.0%
GATGGCGTACCTTCAATTTC+CGG + chr4_4:6626575-6626594 None:intergenic 45.0%
!! ATTTTGGGAAGCTGGTTGGA+TGG + chr4_4:6626593-6626612 None:intergenic 45.0%
!! AGCAATTTTGGGAAGCTGGT+TGG + chr4_4:6626597-6626616 None:intergenic 45.0%
!! ACTCAGCAATTTTGGGAAGC+TGG + chr4_4:6626601-6626620 None:intergenic 45.0%
GAAGAAGAGACTTCTGACTC+TGG - chr4_4:6626674-6626693 Msa0666560:CDS 45.0%
GACAATGATACAGACAGAGC+AGG - chr4_4:6626806-6626825 Msa0666560:CDS 45.0%
GTTCTTCGATGGATGGACAA+AGG + chr4_4:6627000-6627019 None:intergenic 45.0%
!! AAGTCTGGTTCTTCGATGGA+TGG + chr4_4:6627007-6627026 None:intergenic 45.0%
ATAACTGGATCCAGAAGCAG+TGG - chr4_4:6627061-6627080 Msa0666560:CDS 45.0%
ATCTTGATCACCACTGCTTC+TGG + chr4_4:6627074-6627093 None:intergenic 45.0%
AGCAGTGGTGATCAAGATGA+AGG - chr4_4:6627076-6627095 Msa0666560:CDS 45.0%
GGTGATCAAGATGAAGGTGA+TGG - chr4_4:6627082-6627101 Msa0666560:CDS 45.0%
! GATAGCGCTGAAAATGATGC+GGG - chr4_4:6627202-6627221 Msa0666560:CDS 45.0%
ATCAATGCTTGTCCAGCTTC+AGG - chr4_4:6627226-6627245 Msa0666560:CDS 45.0%
AAATCAGCAAGAACTGGTCC+CGG - chr4_4:6627279-6627298 Msa0666560:CDS 45.0%
GATAAGAATCTGAAGGAGCC+GGG + chr4_4:6627300-6627319 None:intergenic 45.0%
CAGAATCTACCAGTTATGGC+CGG - chr4_4:6627746-6627765 Msa0666560:intron 45.0%
AAGATCATTCCGGCCATAAC+TGG + chr4_4:6627758-6627777 None:intergenic 45.0%
CCCCATTTGCAATTCCAACT+TGG - chr4_4:6627847-6627866 Msa0666560:intron 45.0%
! CTCCATCCTTTTCACCAAGT+TGG + chr4_4:6627864-6627883 None:intergenic 45.0%
AGAGTTTCCGCTCAAATACG+AGG - chr4_4:6627882-6627901 Msa0666560:intron 45.0%
CAACTCTACACAGTATGCCA+TGG - chr4_4:6628053-6628072 Msa0666560:CDS 45.0%
TTTCAGTTTCCATGGGAGAG+AGG + chr4_4:6628104-6628123 None:intergenic 45.0%
CTATGCGAATCTATGGAAGC+AGG + chr4_4:6628195-6628214 None:intergenic 45.0%
! GCATGATTGGCTGCATTGAT+TGG + chr4_4:6628248-6628267 None:intergenic 45.0%
AAAGTCTCTCCATCAGAAGC+CGG + chr4_4:6628297-6628316 None:intergenic 45.0%
AACGGCATGACAGGTGAAAA+TGG + chr4_4:6628333-6628352 None:intergenic 45.0%
! ATTTTCACCTGTCATGCCGT+TGG - chr4_4:6628332-6628351 Msa0666560:intron 45.0%
CGGAGCATATCACTTTCCAA+CGG + chr4_4:6628351-6628370 None:intergenic 45.0%
! TTTGGTTTCTGTCCATCACG+AGG + chr4_4:6628467-6628486 None:intergenic 45.0%
GCAACAATGTAACCATGTGG+TGG + chr4_4:6628537-6628556 None:intergenic 45.0%
! TGTTGCTTCTGAGGGAGAAA+TGG - chr4_4:6628551-6628570 Msa0666560:CDS 45.0%
!! GCAGGTAGTATTGGTGCATA+TGG + chr4_4:6628591-6628610 None:intergenic 45.0%
TGAAATGGTTCCACTTGTGG+AGG + chr4_4:6628645-6628664 None:intergenic 45.0%
GAAGCAATAACGTGACTGTC+TGG + chr4_4:6628756-6628775 None:intergenic 45.0%
CAGTCACGTTATTGCTTCTG+AGG - chr4_4:6628758-6628777 Msa0666560:intron 45.0%
! CAGGTGGTATTGGAAGGAAT+GGG + chr4_4:6628806-6628825 None:intergenic 45.0%
CGAATGTGCTAATTCTGGAC+AGG - chr4_4:6628827-6628846 Msa0666560:intron 45.0%
GTCTCTGTCATTCCTTGACT+AGG + chr4_4:6628888-6628907 None:intergenic 45.0%
GAAGTGACAATGTCACTGTG+TGG + chr4_4:6628972-6628991 None:intergenic 45.0%
! CAGTGACATTGTCACTTCTG+AGG - chr4_4:6628974-6628993 Msa0666560:intron 45.0%
! CAGATAGTATAGGAGGGCAT+GGG + chr4_4:6629022-6629041 None:intergenic 45.0%
GTCTCAGTCAGTAACTGACT+TGG + chr4_4:6629104-6629123 None:intergenic 45.0%
AGAAGGGGAACAGAGACAAT+TGG - chr4_4:6629166-6629185 Msa0666560:intron 45.0%
GAAGGGGAACAGAGACAATT+GGG - chr4_4:6629167-6629186 Msa0666560:intron 45.0%
TCCACACTTTCCATGTTTGG+TGG + chr4_4:6629209-6629228 None:intergenic 45.0%
AGCTCCACACTTTCCATGTT+TGG + chr4_4:6629212-6629231 None:intergenic 45.0%
GATGACATTCCCACCTCAAA+GGG + chr4_4:6629251-6629270 None:intergenic 45.0%
TGTTTGAGCAGATGGATCCA+AGG + chr4_4:6629273-6629292 None:intergenic 45.0%
AGCATAAGATTCCTCGTCCT+CGG - chr4_4:6629330-6629349 Msa0666560:intron 45.0%
GCATCAATTAGAGGATTCCG+AGG + chr4_4:6629350-6629369 None:intergenic 45.0%
GCAGCAACAGCATCAATTAG+AGG + chr4_4:6629359-6629378 None:intergenic 45.0%
CTTAAGCTGCAGTGGTTCAA+AGG + chr4_4:6629469-6629488 None:intergenic 45.0%
TTGAACCACTGCAGCTTAAG+AGG - chr4_4:6629469-6629488 Msa0666560:intron 45.0%
TGAACCACTGCAGCTTAAGA+GGG - chr4_4:6629470-6629489 Msa0666560:intron 45.0%
!! GGCTTCAAGTTGAAAGACTG+AGG + chr4_4:6629659-6629678 None:intergenic 45.0%
TTTCAACTTGAAGCCTGCTG+TGG - chr4_4:6629664-6629683 Msa0666560:intron 45.0%
!! TATGAAGCTTGCTGCCATCT+TGG - chr4_4:6629721-6629740 Msa0666560:intron 45.0%
AAACACAGAAAGGAGAGACC+TGG + chr4_4:6629766-6629785 None:intergenic 45.0%
TTCTGGATAGGGTTCTCAAC+TGG - chr4_4:6629917-6629936 Msa0666560:intron 45.0%
TGAAGAAAGAGAGCCAAGAG+GGG + chr4_4:6630028-6630047 None:intergenic 45.0%
GTGAAGAAAGAGAGCCAAGA+GGG + chr4_4:6630029-6630048 None:intergenic 45.0%
TGTGAAGAAAGAGAGCCAAG+AGG + chr4_4:6630030-6630049 None:intergenic 45.0%
AGACATTGGAAACTTGGCAG+TGG - chr4_4:6630415-6630434 Msa0666560:five_prime_UTR 45.0%
!!! AAAATTAATATTTTTTTTGA+TGG + chr4_4:6623050-6623069 None:intergenic 5.0%
! CTCTCTTCCATGGTGGAACA+CGG - chr4_4:6622501-6622520 Msa0666560:three_prime_UTR 50.0%
AAGTCCAACAAGACCAGCCA+TGG + chr4_4:6622730-6622749 None:intergenic 50.0%
! AACACTGGCCTAACCCTATC+AGG + chr4_4:6623392-6623411 None:intergenic 50.0%
TCAGCTGAGCTAGCCCTTTA+TGG - chr4_4:6623826-6623845 Msa0666560:CDS 50.0%
ACTTGGAATTCCAGGGTGAG+GGG - chr4_4:6624169-6624188 Msa0666560:CDS 50.0%
GTAATGGCTACTGCTGCAAG+AGG - chr4_4:6624414-6624433 Msa0666560:CDS 50.0%
TGCAAGAGGCCACAGTCTTA+CGG - chr4_4:6624428-6624447 Msa0666560:CDS 50.0%
TAACACGAGCCGTAAGACTG+TGG + chr4_4:6624440-6624459 None:intergenic 50.0%
GGCTCGTGTTAAACAGCTTG+AGG - chr4_4:6624449-6624468 Msa0666560:CDS 50.0%
CTAGAAGGAACAGTCTAGGG+GGG + chr4_4:6624803-6624822 None:intergenic 50.0%
AAGCCACAGTACAAGTCCTC+AGG - chr4_4:6625015-6625034 Msa0666560:CDS 50.0%
AGCCACAGTACAAGTCCTCA+GGG - chr4_4:6625016-6625035 Msa0666560:CDS 50.0%
TTCCCTGAGGACTTGTACTG+TGG + chr4_4:6625021-6625040 None:intergenic 50.0%
TCCAGCAGAAGAAAGGAGCA+CGG - chr4_4:6625393-6625412 Msa0666560:CDS 50.0%
! AAAGGAGCACGGATAAGGGA+CGG - chr4_4:6625404-6625423 Msa0666560:CDS 50.0%
! TTTAGCTTAACTAGGCGCGC+AGG + chr4_4:6625609-6625628 None:intergenic 50.0%
!! GATGTCGGTTTCACAGGAAG+TGG + chr4_4:6625747-6625766 None:intergenic 50.0%
GACATCAGATGATGCTGGTG+AGG - chr4_4:6625761-6625780 Msa0666560:CDS 50.0%
CTGCTCATTAGGGGATGAAC+AGG + chr4_4:6625856-6625875 None:intergenic 50.0%
CTGTTCATCCCCTAATGAGC+AGG - chr4_4:6625854-6625873 Msa0666560:CDS 50.0%
! CACCAACCCCTTCTGGAAAT+TGG + chr4_4:6625893-6625912 None:intergenic 50.0%
TTTGTCTCACCAACCCCTTC+TGG + chr4_4:6625900-6625919 None:intergenic 50.0%
!! GAAGGGGTTGGTGAGACAAA+TGG - chr4_4:6625900-6625919 Msa0666560:CDS 50.0%
TCAGCGGGTGTAACAGATGA+AGG - chr4_4:6625951-6625970 Msa0666560:CDS 50.0%
CAGCGGGTGTAACAGATGAA+GGG - chr4_4:6625952-6625971 Msa0666560:CDS 50.0%
GCTGTTGTCGTCAGATGTTG+AGG + chr4_4:6626249-6626268 None:intergenic 50.0%
AGGAGATGAAGATGAGCACG+TGG - chr4_4:6626376-6626395 Msa0666560:CDS 50.0%
TAGGGAGGGAGAAGAAGGTT+TGG + chr4_4:6626852-6626871 None:intergenic 50.0%
TCAGGTCTCAATGTGGTGCA+TGG - chr4_4:6627031-6627050 Msa0666560:CDS 50.0%
GCGCTATCAACAGAAGGAAC+AGG + chr4_4:6627190-6627209 None:intergenic 50.0%
AGAATCTTCGACCGTGCTAG+AGG - chr4_4:6627528-6627547 Msa0666560:intron 50.0%
GAATCTTCGACCGTGCTAGA+GGG - chr4_4:6627529-6627548 Msa0666560:intron 50.0%
GACCTTCTTTCCCTCTAGCA+CGG + chr4_4:6627542-6627561 None:intergenic 50.0%
!! CACAGGGCACCGATTTGTTA+AGG + chr4_4:6627606-6627625 None:intergenic 50.0%
GCCCTGTGATCTTCCAGATT+TGG - chr4_4:6627618-6627637 Msa0666560:intron 50.0%
! GTCTGTTGGATTTTCGCCCT+AGG + chr4_4:6627667-6627686 None:intergenic 50.0%
AGGGCGAAAATCCAACAGAC+TGG - chr4_4:6627667-6627686 Msa0666560:intron 50.0%
CATTCTTCACCACGGTCATC+TGG - chr4_4:6628021-6628040 Msa0666560:CDS 50.0%
TCGGGGAGAAGAGACTTCAA+TGG + chr4_4:6628081-6628100 None:intergenic 50.0%
AGTTTCCATGGGAGAGAGGT+CGG + chr4_4:6628100-6628119 None:intergenic 50.0%
TCTCCATTGCATCGGAGGTA+GGG + chr4_4:6628157-6628176 None:intergenic 50.0%
TTCTCCATTGCATCGGAGGT+AGG + chr4_4:6628158-6628177 None:intergenic 50.0%
ACCTCCGATGCAATGGAGAA+CGG - chr4_4:6628158-6628177 Msa0666560:intron 50.0%
TTGCCCGTTCTCCATTGCAT+CGG + chr4_4:6628165-6628184 None:intergenic 50.0%
!! TTTGGTTTGCCGGCTTCTGA+TGG - chr4_4:6628285-6628304 Msa0666560:CDS 50.0%
TCACTTTCCAACGGCATGAC+AGG + chr4_4:6628342-6628361 None:intergenic 50.0%
CTCCGACATTCTTCTGCCAT+GGG - chr4_4:6628366-6628385 Msa0666560:intron 50.0%
CACCCATGGCAGAAGAATGT+CGG + chr4_4:6628371-6628390 None:intergenic 50.0%
TCTTCTGCCATGGGTGTTTC+TGG - chr4_4:6628375-6628394 Msa0666560:intron 50.0%
CTTCTGCCATGGGTGTTTCT+GGG - chr4_4:6628376-6628395 Msa0666560:intron 50.0%
TGCATGCTCGTAGCTACCAT+GGG + chr4_4:6628513-6628532 None:intergenic 50.0%
ATGCATGCTCGTAGCTACCA+TGG + chr4_4:6628514-6628533 None:intergenic 50.0%
CCAGAGAGAGTAAATGCAGC+AGG + chr4_4:6628609-6628628 None:intergenic 50.0%
CCTGCTGCATTTACTCTCTC+TGG - chr4_4:6628606-6628625 Msa0666560:CDS 50.0%
TGATTCCACACCTCCACAAG+TGG - chr4_4:6628632-6628651 Msa0666560:CDS 50.0%
GCAATAACGTGACTGTCTGG+AGG + chr4_4:6628753-6628772 None:intergenic 50.0%
! GCAGGTGGTATTGGAAGGAA+TGG + chr4_4:6628807-6628826 None:intergenic 50.0%
! ATTCGGCAGGTGGTATTGGA+AGG + chr4_4:6628812-6628831 None:intergenic 50.0%
GAATTAGCACATTCGGCAGG+TGG + chr4_4:6628822-6628841 None:intergenic 50.0%
CCAGAATTAGCACATTCGGC+AGG + chr4_4:6628825-6628844 None:intergenic 50.0%
CCTGCCGAATGTGCTAATTC+TGG - chr4_4:6628822-6628841 Msa0666560:intron 50.0%
GTGACAATGTCACTGTGTGG+AGG + chr4_4:6628969-6628988 None:intergenic 50.0%
GCAGATAGTATAGGAGGGCA+TGG + chr4_4:6629023-6629042 None:intergenic 50.0%
GCTCATGTTGCCACCAAACA+TGG - chr4_4:6629196-6629215 Msa0666560:intron 50.0%
GCCACCAAACATGGAAAGTG+TGG - chr4_4:6629205-6629224 Msa0666560:intron 50.0%
GGATGACATTCCCACCTCAA+AGG + chr4_4:6629252-6629271 None:intergenic 50.0%
TGAGGTGGGAATGTCATCCT+TGG - chr4_4:6629253-6629272 Msa0666560:intron 50.0%
ATTAGAGGATTCCGAGGACG+AGG + chr4_4:6629344-6629363 None:intergenic 50.0%
TGCTGCTCACGACAAAAGCA+TGG - chr4_4:6629373-6629392 Msa0666560:intron 50.0%
AGCTTAAGAGGGCTACTGAG+CGG - chr4_4:6629481-6629500 Msa0666560:intron 50.0%
GCTACACGACCTAGGATTCA+AGG - chr4_4:6629686-6629705 Msa0666560:intron 50.0%
GAAGAAAGAGAGCCAAGAGG+GGG + chr4_4:6630027-6630046 None:intergenic 50.0%
CACTTCGCGTGAGACAGATA+AGG - chr4_4:6630120-6630139 Msa0666560:intron 50.0%
! ATGCATGCACCGGCAGAAAT+AGG + chr4_4:6630470-6630489 None:intergenic 50.0%
! TCTTCCATGGTGGAACACGG+TGG - chr4_4:6622504-6622523 Msa0666560:three_prime_UTR 55.0%
CACGGTGGAGCAAAAGTCAC+AGG - chr4_4:6622519-6622538 Msa0666560:three_prime_UTR 55.0%
TCAGCAGCACGGTACAGTTC+AGG + chr4_4:6622672-6622691 None:intergenic 55.0%
CTTGAAGCTGTTGCCATGGC+TGG - chr4_4:6622714-6622733 Msa0666560:three_prime_UTR 55.0%
!! GTTGCCATGGCTGGTCTTGT+TGG - chr4_4:6622723-6622742 Msa0666560:three_prime_UTR 55.0%
GTTGGACTTCTTCGCCAGCT+CGG - chr4_4:6622741-6622760 Msa0666560:three_prime_UTR 55.0%
GCTAGCTCAGCTGATTGTCG+CGG + chr4_4:6623820-6623839 None:intergenic 55.0%
CTTGGAATTCCAGGGTGAGG+GGG - chr4_4:6624170-6624189 Msa0666560:CDS 55.0%
!! TTACGGGGGTATTGCATCCC+TGG + chr4_4:6625296-6625315 None:intergenic 55.0%
TCCGTGCTCCTTTCTTCTGC+TGG + chr4_4:6625397-6625416 None:intergenic 55.0%
TCAGATGATGCTGGTGAGGC+AGG - chr4_4:6625765-6625784 Msa0666560:CDS 55.0%
CAGATGATGCTGGTGAGGCA+GGG - chr4_4:6625766-6625785 Msa0666560:CDS 55.0%
!! GGTAGCATCGCTGGTTTGGT+AGG + chr4_4:6626755-6626774 None:intergenic 55.0%
! TGCAGGTAGCATCGCTGGTT+TGG + chr4_4:6626759-6626778 None:intergenic 55.0%
GACCGTGCTAGAGGGAAAGA+AGG - chr4_4:6627537-6627556 Msa0666560:intron 55.0%
GCTAGAGGGAAAGAAGGTCG+TGG - chr4_4:6627543-6627562 Msa0666560:intron 55.0%
TTCACCACGGTCATCTGGCT+TGG - chr4_4:6628026-6628045 Msa0666560:CDS 55.0%
ATCTCCAAGCCAGATGACCG+TGG + chr4_4:6628033-6628052 None:intergenic 55.0%
TTTCCATGGGAGAGAGGTCG+GGG + chr4_4:6628098-6628117 None:intergenic 55.0%
GTTTCCATGGGAGAGAGGTC+GGG + chr4_4:6628099-6628118 None:intergenic 55.0%
TCCATTGCATCGGAGGTAGG+GGG + chr4_4:6628155-6628174 None:intergenic 55.0%
CTCCATTGCATCGGAGGTAG+GGG + chr4_4:6628156-6628175 None:intergenic 55.0%
CCTCCGATGCAATGGAGAAC+GGG - chr4_4:6628159-6628178 Msa0666560:intron 55.0%
GCTCCGACATTCTTCTGCCA+TGG - chr4_4:6628365-6628384 Msa0666560:intron 55.0%
TGGATGCCCAGAAACACCCA+TGG + chr4_4:6628385-6628404 None:intergenic 55.0%
ACCATGGGCAGCGTTAGGAA+GGG + chr4_4:6628498-6628517 None:intergenic 55.0%
TACCATGGGCAGCGTTAGGA+AGG + chr4_4:6628499-6628518 None:intergenic 55.0%
TAGCTACCATGGGCAGCGTT+AGG + chr4_4:6628503-6628522 None:intergenic 55.0%
ACGAGCATGCATCCACCACA+TGG - chr4_4:6628522-6628541 Msa0666560:CDS 55.0%
TGGTTCCACTTGTGGAGGTG+TGG + chr4_4:6628640-6628659 None:intergenic 55.0%
GCACATTCGGCAGGTGGTAT+TGG + chr4_4:6628816-6628835 None:intergenic 55.0%
TCAGACACTCCAGCCCTTTG+AGG - chr4_4:6629235-6629254 Msa0666560:intron 55.0%
!! ACACTCCAGCCCTTTGAGGT+GGG - chr4_4:6629239-6629258 Msa0666560:intron 55.0%
ACATTCCCACCTCAAAGGGC+TGG + chr4_4:6629247-6629266 None:intergenic 55.0%
GCTGCAGTGGTTCAAAGGCA+AGG + chr4_4:6629464-6629483 None:intergenic 55.0%
GTAGCCCTCTTAAGCTGCAG+TGG + chr4_4:6629477-6629496 None:intergenic 55.0%
GCTTAAGAGGGCTACTGAGC+GGG - chr4_4:6629482-6629501 Msa0666560:intron 55.0%
CTCCAAAGAGATCCCCCTCT+TGG - chr4_4:6630012-6630031 Msa0666560:intron 55.0%
AGCCAAGAGGGGGATCTCTT+TGG + chr4_4:6630017-6630036 None:intergenic 55.0%
CAATGCAGGTCCGTTCTCAG+AGG - chr4_4:6630091-6630110 Msa0666560:intron 55.0%
TGCTCCACCGTGTTCCACCA+TGG + chr4_4:6622511-6622530 None:intergenic 60.0%
ACTCAGCAAGGTCACCGAGC+TGG + chr4_4:6622758-6622777 None:intergenic 60.0%
GAATTCCAGGGTGAGGGGGA+TGG - chr4_4:6624174-6624193 Msa0666560:CDS 60.0%
TCTAACCATCCCCCTCACCC+TGG + chr4_4:6624182-6624201 None:intergenic 60.0%
AGGTTTGATGTGGCTGGGGC+TGG - chr4_4:6624930-6624949 Msa0666560:CDS 60.0%
GGTTTGATGTGGCTGGGGCT+GGG - chr4_4:6624931-6624950 Msa0666560:CDS 60.0%
GTTTGATGTGGCTGGGGCTG+GGG - chr4_4:6624932-6624951 Msa0666560:CDS 60.0%
CATTGCATCGGAGGTAGGGG+GGG + chr4_4:6628153-6628172 None:intergenic 60.0%
CCATTGCATCGGAGGTAGGG+GGG + chr4_4:6628154-6628173 None:intergenic 60.0%
CCCGTTCTCCATTGCATCGG+AGG + chr4_4:6628162-6628181 None:intergenic 60.0%
CCATGGGCAGCGTTAGGAAG+GGG + chr4_4:6628497-6628516 None:intergenic 60.0%
! GACACTCCAGCCCTTTGAGG+TGG - chr4_4:6629238-6629257 Msa0666560:intron 60.0%
CTAGGTCGTGTAGCCACAGC+AGG + chr4_4:6629680-6629699 None:intergenic 60.0%
CTGCTGTGGCTACACGACCT+AGG - chr4_4:6629678-6629697 Msa0666560:intron 60.0%
GGAACAGTCTAGGGGGGCCA+CGG + chr4_4:6624797-6624816 None:intergenic 65.0%
GTCGCTGCAGGTAGCATCGC+TGG + chr4_4:6626764-6626783 None:intergenic 65.0%
TCGTCGGACTGAGTCGCTGC+AGG + chr4_4:6626776-6626795 None:intergenic 65.0%
TCTCCCCGACCTCTCTCCCA+TGG - chr4_4:6628092-6628111 Msa0666560:intron 65.0%
! ATCGGAGGTAGGGGGGGCAT+AGG + chr4_4:6628147-6628166 None:intergenic 65.0%
CCCCCCTACCTCCGATGCAA+TGG - chr4_4:6628151-6628170 Msa0666560:intron 65.0%
CCCCTTCCTAACGCTGCCCA+TGG - chr4_4:6628494-6628513 Msa0666560:CDS 65.0%
! GGAGGTAGGGGGGGCATAGG+TGG + chr4_4:6628144-6628163 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 6622463 6630568 6622463 ID=Msa0666560;Name=Msa0666560
chr4_4 mRNA 6622463 6630568 6622463 ID=Msa0666560-mRNA-1;Parent=Msa0666560;Name=Msa0666560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=158|1|0.88|1|1|1|9|657|1571
chr4_4 exon 6622463 6623170 6622463 ID=Msa0666560-mRNA-1:exon:2165;Parent=Msa0666560-mRNA-1
chr4_4 exon 6623265 6623369 6623265 ID=Msa0666560-mRNA-1:exon:2164;Parent=Msa0666560-mRNA-1
chr4_4 exon 6623462 6623548 6623462 ID=Msa0666560-mRNA-1:exon:2163;Parent=Msa0666560-mRNA-1
chr4_4 exon 6623637 6627474 6623637 ID=Msa0666560-mRNA-1:exon:2162;Parent=Msa0666560-mRNA-1
chr4_4 exon 6627572 6627633 6627572 ID=Msa0666560-mRNA-1:exon:2161;Parent=Msa0666560-mRNA-1
chr4_4 exon 6627970 6628099 6627970 ID=Msa0666560-mRNA-1:exon:2160;Parent=Msa0666560-mRNA-1
chr4_4 exon 6628205 6628328 6628205 ID=Msa0666560-mRNA-1:exon:2159;Parent=Msa0666560-mRNA-1
chr4_4 exon 6628491 6628654 6628491 ID=Msa0666560-mRNA-1:exon:2158;Parent=Msa0666560-mRNA-1
chr4_4 exon 6630256 6630568 6630256 ID=Msa0666560-mRNA-1:exon:2157;Parent=Msa0666560-mRNA-1
chr4_4 five_prime_UTR 6630411 6630568 6630411 ID=Msa0666560-mRNA-1:five_prime_utr;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6630256 6630410 6630256 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6628491 6628654 6628491 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6628205 6628328 6628205 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6627970 6628099 6627970 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6627572 6627633 6627572 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6623637 6627474 6623637 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6623462 6623548 6623462 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6623265 6623369 6623265 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 CDS 6623120 6623170 6623120 ID=Msa0666560-mRNA-1:cds;Parent=Msa0666560-mRNA-1
chr4_4 three_prime_UTR 6622463 6623119 6622463 ID=Msa0666560-mRNA-1:three_prime_utr;Parent=Msa0666560-mRNA-1
Gene Sequence

>Msa0666560

ATGCCGATATCGAAGTATCTTATACGAAACGAGTACAGTTTAGCGGATCCTGAACTGTACCGTGCTGCTGATAAAGATGATCCTGAAGCTCTTCTTGAAGCTGTTGCCATGGCTGGTCTTGTTGGACTTCTTCGCCAGCTCGGTGACCTTGCTGAGTTTGCTGCCGAGATCTTCCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGCCACAGTCTTACGGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTTGAAAAGGCCTTTTTCTCTCAAACTCATCATTCGTCATTTTTTACTAATGGAGGGATTGATTGGCATCGCAATATTCAGTCTGAACAAAACCTCGTTTCTAGTGGAAACTTACCTCGATTAATAATGGATTCATATGAAGAATGCCGTGGCCCCCCTAGACTGTTCCTTCTAGATAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAGCGTTATACTGATCCATCATTCTTTAAAGCGGAGTCAGCTTCATCTGTTAAAGCCACAGTACAAGTCCTCAGGGAAAAAAGAATTCGCAAAGTCAAGCAGAAGAAAGGAGCACGGATAAGGGACGGTGAAGCTCCAAATGCTGTACCAACACATTCAAAATTACATCAGCTGCTTCTTGAGGAACGTATTGAGAATGGTTATAGTAATCCTGCGCGCCTAGTTAAGCTAAAGAAAAGACAATTGAATGGACCTTCCGTTGAAGGAAATTCTGGGAAAAGTTACATGGAGAAATTTCTAGAAACTCCCTCACCTGATTATAAAATGATTTGCGAAACTTCAATCTTTCCACTTCCTGTGAAACCGACATCAGATGATGCTGGTGAGGCAGGGATTAAAATTCTTGAAATCAGTAGCTTTAGTCCTTTGAAAAAGTCGACTGGAAGAAATGAAAGCACCTGTTCATCCCCTAATGAGCAGGAATTTGATATAAACCAATTTCCAGAAGGGGTTGGTGAGACAAATGGAGATCTTGTGATGGTGAAAGAACAAATCTCAGCGGGTGTAACAGATGAAGGGTCTTTTAATGATGTCAAGGTGTCTGATGAAACAGAACTGGCAATCAAGGAACAAAAGAAATTTGAAAACAGCTTAAATAGGTATCATTCTGATGACGTGACTAGTGAGGTTGACAACTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACCGATGATGAGTATAAACCTAAAAAAAGCGTCTTGAAAAATCAAAAGGTAACAGATGCCAATAAAGAACGTCGATTACAAGCTCGGTTTTCAGATTCTCACTCATTTGCAGACTCCTCAACATCTGACGACAACAGCCCATTCAAACAAGAGAGAAATGAGAAAGATATTGAAGTGAAAGCTCGGTTATCAGATTCTCACTCAACTGGAACCTCTTCGACATCAGACAATAATAGCTCATTCAGAGGAGATGAAGATGAGCACGTGGAACTGCGAACTCACTTTTCAGATTCTCAATCTACCAGAAACTCCTCTACGTCAGATGTAAATAGTTCTTCCAAGAAAGATAAATCTTACTTCTCTCATTCTGATTCATTGAGCACTGTTGTTGAAAATATACAATCAGAACCCATTTTATTTACAACTTCTAAATATTACGAACCGGAAATTGAAGGTACGCCATCCAACCAGCTTCCCAAAATTGCTGAGTTTCAAAATACAGATAGTAGGAAGTTTGTCATGCATGATGATGTACGTGTTCATGAAGAAGAGACTTCTGACTCTGGGAAAACATATTCGGATCTGTTGACTTCAGGAAAGTTGTCGTGTTCTGATTTTGAACCTACCAAACCAGCGATGCTACCTGCAGCGACTCAGTCCGACGAAACCATTTCTGACAATGATACAGACAGAGCAGGTTTCGTTGAATTTGTTGCTTCCAAACCTTCTTCTCCCTCCCTAATAAAAGATGATACTTGCCCAGTGGATTCTTCTGATAAAATTTCATTGGACAACTTGGTTGATGATGATCCACATATTCATTCTCATGATTTGTTACAAGTTTCTAATGGTTCACCAAAAGATTCCCTTTGTCCATCCATCGAAGAACCAGACTTGAATTCAGGTCTCAATGTGGTGCATGGTGATGAAATAACTGGATCCAGAAGCAGTGGTGATCAAGATGAAGGTGATGGTCATTTTAAAAATCCATCTTCTCCTCGTAATCGTATGAAGATAAATGGTGATATCAGTGAAGTTGTTGAGTCAAAAGGTCAACCTGTTCCTTCTGTTGATAGCGCTGAAAATGATGCGGGTATCAATGCTTGTCCAGCTTCAGGTATGATTTGTTCTACGTCAAGGAGCCTTTCAAATCAGCAAGAACTGGTCCCGGCTCCTTCAGATTCTTATCAGATGGAATCCAATGAAGTGGAATTGACTCAAGTTTTCATGGACTCAAATACTGAGATGAGCAACAATCAATTGGTACCATTATCAGATACAGCATCATCTGATATCATACATCCTCCAGTGAGTAATCTTACAAAATCAGAAGAATCTCTTTCTGCTTTTGCAAATCCAAATGAGATAGAGATGGAAGTCTATAAGGCAGTTGCTAGAGAATCTTCGACCGTGCTAGAGGGAAAGAAGGTCGTGGTTCATCCCGAAATTGTTTCTGCAGATGTACAAATGAACCTTAACAAATCGGTGCCCTGTGATCTTCCAGATTTGGAAAATAACATTGAAAAGTCATCTCCTAGGGCGAAAATCCAACAGACTGGCTTTATAGATGATGCGAAAATGGTGCCTGAATTTTCTGGGTTTGACACTCGGCAGTCAGAATCTACCAGTTATGGCCGGAATGATCTTTTACAGAATAACAGAAATAGTTTTTCATCACCACCTTATAACCAGTTTGAGTCTGAAACTTATTTAGAGCCCCATTTGCAATTCCAACTTGGTGAAAAGGATGGAGAGTTTCCGCTCAAATACGAGGAAAACTTTGCCTCTGAGAAATCTCAATCTCAGCAGATATATGAATTGAAGCAAGAAGGCACTCATGCTCTTTCTGAATCTGTTTCAGAAATCCCTGCAGATGAATCATCATCAGTTCATTCTTCACCACGGTCATCTGGCTTGGAGATCAACTCTACACAGTATGCCATGGATCCATTGAAGTCTCTTCTCCCCGACCTCTCTCCCATGGAAACTGAAAACAAACTTGATGAGATGCCACCTATGCCCCCCCTACCTCCGATGCAATGGAGAACGGGCAAAGTTCAACCTGCTTCCATAGATTCGCATAGAGATGATTTAGAAGTGCATCAAGCTTCAGTCCAATCAATGCAGCCAATCATGCCTGATAAGAAGTCTCAATTTGGTTTGCCGGCTTCTGATGGAGAGACTTTATTTTATCAGAATCCATTTTCACCTGTCATGCCGTTGGAAAGTGATATGCTCCGACATTCTTCTGCCATGGGTGTTTCTGGGCATCCAATTGCTTTACCTTTTCAGTTTCCTCTCATGGTTAATGAAGCAAATGGTCAGTATAATTACCTCGTGATGGACAGAAACCAAATTCAGAACCCCTTCCTAACGCTGCCCATGGTAGCTACGAGCATGCATCCACCACATGGTTACATTGTTGCTTCTGAGGGAGAAATGGTACAGACTTCAAACCCATATGCACCAATACTACCTGCTGCATTTACTCTCTCTGGAGATGATTCCACACCTCCACAAGTGGAACCATTTCAACATCCAACTCAATCAAAGACAGAGACTAGTGCAGATGATAAAACACCTGAGCAGCCTATACATAATGTAGTGTCTAGGGACGGGCCTCCAGACAGTCACGTTATTGCTTCTGAGGGAGAAATGGTACATAATTCAAGCCCATTCCTTCCAATACCACCTGCCGAATGTGCTAATTCTGGACAGGATTCCGTCACTCCTATAGAAAATTTGACTCAATCTCCTAGTCAAGGAATGACAGAGACTAGTTCAGATGATACAACACTTCCACAGTCTATGAGTAATGTTATATCTATTGACAAGCCTCCACACAGTGACATTGTCACTTCTGAGGAAGAAATGGTACAAAGTTCTAACCCATGCCCTCCTATACTATCTGCTGAATCTTCTGTTTCTGAACATGATTCCATCTCTCCACAAGAAAAAATAACTCTTTCTCCAAGTCAGTTACTGACTGAGACTAGTTCTGAAGTCAAAACACCTAATCATTCTTTAAGTAATGTAGAAGGGGAACAGAGACAATTGGGTATTTCGCTCATGTTGCCACCAAACATGGAAAGTGTGGAGCTCAATCAGACACTCCAGCCCTTTGAGGTGGGAATGTCATCCTTGGATCCATCTGCTCAAACATCAGAGTTTGAGAGTGAAAGGATAAATGTAAAGTCAAAGCATAAGATTCCTCGTCCTCGGAATCCTCTAATTGATGCTGTTGCTGCTCACGACAAAAGCATGCTTAAGAGGGCTACTGAGCGGGTTATGCCTCAAATAGAACCAAAGGTAGATGAAAGAGATTCATGGTTAGAACAGATACGAACAAAGTCTTTCAACTTGAAGCCTGCTGTGGCTACACGACCTAGGATTCAAGGTCCAAAAACAAATATGAAGCTTGCTGCCATCTTGGAGAAAGCTAATTCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGATGAGGATAGTTGGAGTGATTCTTGA
Protein sequence

>Msa0666560

MPISKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHRNIQSEQNLVSSGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKAESASSVKATVQVLREKRIRKVKQKKGARIRDGEAPNAVPTHSKLHQLLLEERIENGYSNPARLVKLKKRQLNGPSVEGNSGKSYMEKFLETPSPDYKMICETSIFPLPVKPTSDDAGEAGIKILEISSFSPLKKSTGRNESTCSSPNEQEFDINQFPEGVGETNGDLVMVKEQISAGVTDEGSFNDVKVSDETELAIKEQKKFENSLNRYHSDDVTSEVDNYMDALTTMESELETDDEYKPKKSVLKNQKVTDANKERRLQARFSDSHSFADSSTSDDNSPFKQERNEKDIEVKARLSDSHSTGTSSTSDNNSSFRGDEDEHVELRTHFSDSQSTRNSSTSDVNSSSKKDKSYFSHSDSLSTVVENIQSEPILFTTSKYYEPEIEGTPSNQLPKIAEFQNTDSRKFVMHDDVRVHEEETSDSGKTYSDLLTSGKLSCSDFEPTKPAMLPAATQSDETISDNDTDRAGFVEFVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQVSNGSPKDSLCPSIEEPDLNSGLNVVHGDEITGSRSSGDQDEGDGHFKNPSSPRNRMKINGDISEVVESKGQPVPSVDSAENDAGINACPASGMICSTSRSLSNQQELVPAPSDSYQMESNEVELTQVFMDSNTEMSNNQLVPLSDTASSDIIHPPVSNLTKSEESLSAFANPNEIEMEVYKAVARESSTVLEGKKVVVHPEIVSADVQMNLNKSVPCDLPDLENNIEKSSPRAKIQQTGFIDDAKMVPEFSGFDTRQSESTSYGRNDLLQNNRNSFSSPPYNQFESETYLEPHLQFQLGEKDGEFPLKYEENFASEKSQSQQIYELKQEGTHALSESVSEIPADESSSVHSSPRSSGLEINSTQYAMDPLKSLLPDLSPMETENKLDEMPPMPPLPPMQWRTGKVQPASIDSHRDDLEVHQASVQSMQPIMPDKKSQFGLPASDGETLFYQNPFSPVMPLESDMLRHSSAMGVSGHPIALPFQFPLMVNEANGQYNYLVMDRNQIQNPFLTLPMVATSMHPPHGYIVASEGEMVQTSNPYAPILPAAFTLSGDDSTPPQVEPFQHPTQSKTETSADDKTPEQPIHNVVSRDGPPDSHVIASEGEMVHNSSPFLPIPPAECANSGQDSVTPIENLTQSPSQGMTETSSDDTTLPQSMSNVISIDKPPHSDIVTSEEEMVQSSNPCPPILSAESSVSEHDSISPQEKITLSPSQLLTETSSEVKTPNHSLSNVEGEQRQLGISLMLPPNMESVELNQTLQPFEVGMSSLDPSAQTSEFESERINVKSKHKIPRPRNPLIDAVAAHDKSMLKRATERVMPQIEPKVDERDSWLEQIRTKSFNLKPAVATRPRIQGPKTNMKLAAILEKANSIRQALAGSDEDDEDSWSDS*