AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1302550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302550 MtrunA17_Chr4g0075761 98.303 884 12 2 1 884 1 881 0.0 1805
Msa1302550 MtrunA17_Chr2g0289951 68.621 290 88 2 595 883 14 301 1.14e-134 404
Msa1302550 MtrunA17_Chr2g0289901 63.240 321 84 3 595 883 14 332 2.47e-132 399
Msa1302550 MtrunA17_Chr2g0289941 42.780 554 262 11 83 612 12 534 1.03e-129 400
Msa1302550 MtrunA17_Chr2g0289891 41.293 557 283 11 81 619 43 573 1.25e-116 367
Msa1302550 MtrunA17_Chr2g0289911 41.985 524 272 8 81 600 38 533 1.39e-113 358
Msa1302550 MtrunA17_Chr2g0289881 62.445 229 82 3 595 822 18 243 9.84e-87 276
Msa1302550 MtrunA17_Chr2g0289931 66.341 205 64 3 618 821 1 201 3.42e-84 268
Msa1302550 MtrunA17_Chr2g0289961 40.945 381 201 7 228 600 7 371 5.39e-77 255
Msa1302550 MtrunA17_Chr5g0427791 33.509 379 224 11 513 875 3281 3647 1.87e-52 200
Msa1302550 MtrunA17_Chr3g0132611 32.558 387 232 11 513 882 3287 3661 3.03e-51 196
Msa1302550 MtrunA17_Chr4g0052551 32.884 371 223 10 526 882 3379 3737 1.02e-49 191
Msa1302550 MtrunA17_Chr4g0052561 32.615 371 224 10 526 882 3400 3758 7.84e-49 189
Msa1302550 MtrunA17_Chr2g0293841 28.691 359 228 8 526 869 666 1011 3.14e-37 151
Msa1302550 MtrunA17_Chr2g0289871 73.171 82 22 0 802 883 1 82 1.99e-35 129
Msa1302550 MtrunA17_Chr2g0289921 69.512 82 25 0 802 883 1 82 3.18e-33 122
Msa1302550 MtrunA17_Chr7g0265431 25.000 384 260 7 513 878 771 1144 3.21e-32 135
Msa1302550 MtrunA17_Chr4g0037101 25.497 302 189 6 609 879 1581 1877 2.30e-16 84.3
Msa1302550 MtrunA17_Chr1g0181721 24.096 332 195 7 551 836 1179 1499 1.17e-14 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302550 AT4G12570.1 49.440 803 381 9 83 884 95 873 0.0 764
Msa1302550 AT1G55860.1 33.333 363 217 9 526 875 3323 3673 9.60e-50 192
Msa1302550 AT1G70320.1 33.333 363 217 9 526 875 3300 3650 2.90e-49 191
Msa1302550 AT3G17205.2 28.090 356 234 6 526 869 657 1002 2.66e-36 148
Msa1302550 AT3G17205.1 28.090 356 234 6 526 869 671 1016 2.67e-36 148
Msa1302550 AT3G17205.3 28.090 356 234 6 526 869 671 1016 2.67e-36 148
Msa1302550 AT3G53090.1 24.932 365 246 7 523 869 775 1129 1.00e-30 131
Msa1302550 AT3G53090.2 24.932 365 246 7 523 869 775 1129 1.00e-30 131
Msa1302550 AT5G02880.1 25.683 366 224 11 553 879 1142 1498 7.77e-18 89.7
Msa1302550 AT5G02880.2 25.575 348 211 11 553 861 1142 1480 1.02e-16 85.9
Msa1302550 AT4G38600.2 24.183 306 184 9 609 879 1498 1790 6.43e-13 73.6
Msa1302550 AT1G53930.1 37.634 93 55 2 64 156 69 158 4.07e-11 62.8

Find 193 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCATTTCGCAAAATTT+AGG 0.140874 8_3:+65127718 None:intergenic
TTGAAGGCAAATATCAATTT+TGG 0.147305 8_3:+65126110 None:intergenic
AGAAATCTTGTTCGATCTTT+TGG 0.167292 8_3:+65125574 None:intergenic
GCTTACTACTTATATTAATT+TGG 0.175687 8_3:-65126757 Msa1302550:CDS
CTTGTATGTTTCACCTTATA+CGG 0.191170 8_3:-65126643 Msa1302550:CDS
ACTGCGTGCTGGACTGTTTA+TGG 0.197538 8_3:-65125701 Msa1302550:CDS
ATCTTGGTCAAATGTTTATA+TGG 0.240608 8_3:-65121734 Msa1302550:three_prime_UTR
ATTGATTTCACTGTTTCTTC+TGG 0.253137 8_3:+65127035 None:intergenic
ATATTCAGATATCTTGGTTT+TGG 0.258128 8_3:-65123917 Msa1302550:CDS
TTGGATAAACATACCAGAAT+TGG 0.261658 8_3:+65125549 None:intergenic
TTTATGTCTTCTAAAGTAAT+AGG 0.263529 8_3:+65124350 None:intergenic
AAACAACTCTTCATTCTTCA+TGG 0.263574 8_3:-65127187 Msa1302550:CDS
TGATAGTTTGTTGAGGAATT+TGG 0.265690 8_3:-65126343 Msa1302550:CDS
CAAAGGGTTGGTGTTGGTTC+AGG 0.273096 8_3:-65126394 Msa1302550:CDS
GCAGAATCAGCATCAAGTTT+AGG 0.275846 8_3:+65126720 None:intergenic
TTCACCTTATACGGGGAATA+AGG 0.276380 8_3:-65126634 Msa1302550:CDS
TTCTCATTTCGCAAAATTTA+GGG 0.284524 8_3:+65127719 None:intergenic
ACAAGATTTCTCCCCAATTC+TGG 0.284588 8_3:-65125562 Msa1302550:intron
ATTAGAGAAGTGGAGGAATT+AGG 0.288826 8_3:-65124236 Msa1302550:CDS
GAACATATTGGCTCTAGTTT+TGG 0.291901 8_3:-65121940 Msa1302550:CDS
CCAGTTTCTTTCCAGATTGC+AGG 0.320682 8_3:+65121902 None:intergenic
TTGGCAAGTTGTTAATGATA+TGG 0.321662 8_3:-65126847 Msa1302550:CDS
AGTTGAAGGCTTTCGTGGTT+TGG 0.323282 8_3:-65122100 Msa1302550:CDS
AACTAGAGCCAATATGTTCT+TGG 0.327789 8_3:+65121944 None:intergenic
GTATGTTGATCTTCTTATAA+AGG 0.330723 8_3:-65124144 Msa1302550:CDS
GTTGAAGGCTTTCGTGGTTT+GGG 0.333475 8_3:-65122099 Msa1302550:CDS
TACTTATATTAATTTGGCTT+TGG 0.333864 8_3:-65126751 Msa1302550:CDS
TCAGCATCAAGTTTAGGTTT+AGG 0.350632 8_3:+65126726 None:intergenic
GTGAAATATTTACCAGTTGA+AGG 0.351097 8_3:-65122114 Msa1302550:CDS
TAGAAGCTGCAAGCAAATAT+TGG 0.351289 8_3:-65124306 Msa1302550:CDS
GCTGAGGGAGTGGTTTCTTT+TGG 0.351931 8_3:-65125644 Msa1302550:CDS
TGGATAAACATACCAGAATT+GGG 0.356070 8_3:+65125550 None:intergenic
ATGCCTCCTAGCTTCGAAAT+TGG 0.357538 8_3:+65125846 None:intergenic
TTCATTGATTCAGATGCATT+AGG 0.373706 8_3:-65124269 Msa1302550:CDS
CAAGCCTTATTCCCCGTATA+AGG 0.374779 8_3:+65126630 None:intergenic
ATTAATAATACAGGATTTGA+AGG 0.375239 8_3:-65121704 Msa1302550:three_prime_UTR
ACACAGATATTCAGATATCT+TGG 0.377507 8_3:-65123923 Msa1302550:CDS
AGTCCTCACAGGGACTAAAA+AGG 0.379202 8_3:+65126257 None:intergenic
TCTTGTTCTTGTCCTGCTGC+TGG 0.383862 8_3:+65126190 None:intergenic
TGCATTAGCTTTGATGCATA+AGG 0.385492 8_3:-65124426 Msa1302550:CDS
ATGCCATTTCCGTCGAAGAT+TGG 0.390215 8_3:-65123977 Msa1302550:CDS
TTAATAGATTTAACAGCGTC+AGG 0.391859 8_3:+65126786 None:intergenic
TGTAAATTGCTTAGTAGAGT+TGG 0.394201 8_3:-65126513 Msa1302550:CDS
CCTGCAATCTGGAAAGAAAC+TGG 0.394623 8_3:-65121902 Msa1302550:three_prime_UTR
AAGTTGTCAAAGTTCTGTTT+TGG 0.395384 8_3:-65121785 Msa1302550:three_prime_UTR
CAGTCCAGCACGCAGTGATT+CGG 0.396009 8_3:+65125708 None:intergenic
TTTAGCCATGATGATATTCC+CGG 0.399239 8_3:-65125824 Msa1302550:CDS
GTAAATTGCTTAGTAGAGTT+GGG 0.400275 8_3:-65126512 Msa1302550:CDS
TTTGCTTGCAGCTTCTATAT+AGG 0.404474 8_3:+65124312 None:intergenic
TTTCCAATCTTCGACGGAAA+TGG 0.407461 8_3:+65123974 None:intergenic
TTGTAGTTAATAGTAAGAAC+AGG 0.411643 8_3:-65124172 Msa1302550:CDS
TCGTAGTCTTCTTTCACCTC+CGG 0.415102 8_3:+65125805 None:intergenic
TAGAGTCTGAAGATCTTGAT+TGG 0.418715 8_3:-65124019 Msa1302550:CDS
TTCATTCGAATGATGTCAAA+AGG 0.419159 8_3:-65127083 Msa1302550:CDS
GACGCTAATCTTCACCTTGT+TGG 0.419467 8_3:-65126900 Msa1302550:CDS
ATTTACAAGTCCCATGAATC+TGG 0.421290 8_3:-65122063 Msa1302550:CDS
GACTGGAATCGAGCAGCAAC+AGG 0.428376 8_3:-65126238 Msa1302550:CDS
GGATAAAATATTAATAATAC+AGG 0.430551 8_3:-65121713 Msa1302550:three_prime_UTR
AGTCCAGCACGCAGTGATTC+GGG 0.431196 8_3:+65125709 None:intergenic
TGTAACATCCATAGCTGAGC+AGG 0.432078 8_3:-65124114 Msa1302550:CDS
ATTCGAATGAAGAAATGAAT+AGG 0.433080 8_3:+65127095 None:intergenic
GTCATTACCCAAGAACATAT+TGG 0.433530 8_3:-65121952 Msa1302550:CDS
TATTACTTTAGAAGACATAA+AGG 0.438867 8_3:-65124348 Msa1302550:CDS
ATAGCTGCTGGTTCGTCATC+GGG 0.438906 8_3:-65121653 Msa1302550:three_prime_UTR
GAAGACGATCACCAGATTCA+TGG 0.439105 8_3:+65122052 None:intergenic
AACCACTCCCTCAGCACACC+GGG 0.439249 8_3:+65125652 None:intergenic
GCAGGCTGCGCGTGTGGCGT+TGG 0.439975 8_3:-65126541 Msa1302550:CDS
CAAGGTAACAAGAACGGAAA+TGG 0.443734 8_3:+65126662 None:intergenic
TGGTGAACATACCTGCAATC+TGG 0.443889 8_3:-65121913 Msa1302550:exon
AACTTTGAAAGAAGAACTGC+TGG 0.445274 8_3:+65124042 None:intergenic
AAGATTTCTAAGCTTTATGA+TGG 0.447881 8_3:-65125988 Msa1302550:CDS
AAGAATCTCAGCAAAACCTT+TGG 0.455740 8_3:+65124079 None:intergenic
ACTAGAGCCAATATGTTCTT+GGG 0.457550 8_3:+65121945 None:intergenic
CGTAGTCTTCTTTCACCTCC+GGG 0.458862 8_3:+65125806 None:intergenic
TGCTCGATTCCAGTCCTCAC+AGG 0.460556 8_3:+65126246 None:intergenic
AAAGCACACACTGAGTATAA+TGG 0.464625 8_3:-65123954 Msa1302550:CDS
TGCAGCTTTGTACAGACTAT+AGG 0.464817 8_3:-65121847 Msa1302550:three_prime_UTR
AAATGTGTTATGTATACATT+TGG 0.465155 8_3:-65121571 Msa1302550:three_prime_UTR
GTTGGTTCTAGCGGCGGCGA+TGG 0.466611 8_3:-65127146 Msa1302550:CDS
CCCATCTGTTGTCCTCTAGT+TGG 0.470193 8_3:-65121819 Msa1302550:three_prime_UTR
ACATTCTAGTTAATAGCTGC+TGG 0.473413 8_3:-65121665 Msa1302550:three_prime_UTR
TCATGGACCGGTGGTGGTGG+TGG 0.473509 8_3:-65127170 Msa1302550:CDS
TTGCAGCTTCTATATAGGTC+AGG 0.476529 8_3:+65124317 None:intergenic
GAGGAATTTGGATTTGAGCT+TGG 0.478934 8_3:-65126331 Msa1302550:CDS
GAGATTCACTGACAAGGAAA+TGG 0.479101 8_3:-65126076 Msa1302550:CDS
TTAAGACGAGCTTGCATGAC+AGG 0.479167 8_3:+65121976 None:intergenic
CATTCTTCATGGACCGGTGG+TGG 0.480500 8_3:-65127176 Msa1302550:CDS
CTACTTGTTTAAAGCTTCCA+AGG 0.482863 8_3:-65124498 Msa1302550:intron
TTGTATGTTTCACCTTATAC+GGG 0.484986 8_3:-65126642 Msa1302550:CDS
AAACCACGAAAGCCTTCAAC+TGG 0.486764 8_3:+65122102 None:intergenic
TCTTCATGGACCGGTGGTGG+TGG 0.495795 8_3:-65127173 Msa1302550:CDS
TTACCAGTTGAAGGCTTTCG+TGG 0.496517 8_3:-65122105 Msa1302550:CDS
TAAAAGCATGTATGAGATGA+AGG 0.496856 8_3:+65122030 None:intergenic
CCACTGGCCCCGGTGTGCTG+AGG 0.499404 8_3:-65125660 Msa1302550:CDS
ATTGTTTATGATCTTTGTCA+TGG 0.500871 8_3:-65126819 Msa1302550:CDS
GATCCCGAATCACTGCGTGC+TGG 0.506030 8_3:-65125712 Msa1302550:CDS
GCCCCGGTGTGCTGAGGGAG+TGG 0.508642 8_3:-65125654 Msa1302550:CDS
AATGAAGAAGCCACTGGCCC+CGG 0.512967 8_3:-65125670 Msa1302550:CDS
AATAGCTGCTGGTTCGTCAT+CGG 0.516229 8_3:-65121654 Msa1302550:three_prime_UTR
CAGCAGGACAAGAACAAGAA+TGG 0.516630 8_3:-65126186 Msa1302550:CDS
TGACAAGGAAATGGTGTTTG+AGG 0.517234 8_3:-65126067 Msa1302550:CDS
AATGACAGCTGAAGAAAAGA+AGG 0.520042 8_3:-65122160 Msa1302550:CDS
AAGTGGAGGAATTAGGACAG+AGG 0.520577 8_3:-65124229 Msa1302550:CDS
ATGTCACCAATTTCGAAGCT+AGG 0.522617 8_3:-65125852 Msa1302550:CDS
TCTAGCGGCGGCGATGGTGG+TGG 0.527208 8_3:-65127140 Msa1302550:CDS
ATGCAGATTATGTTGTACCT+TGG 0.529364 8_3:+65124481 None:intergenic
AAAGCGATCCAGCTGTGTCC+TGG 0.529729 8_3:-65124206 Msa1302550:CDS
ACTCTTCATTCTTCATGGAC+CGG 0.530727 8_3:-65127182 Msa1302550:CDS
TGTTATGTATACATTTGGTC+TGG 0.532851 8_3:-65121566 None:intergenic
CAGGTTTCACACTTTGCCAA+AGG 0.533753 8_3:-65124095 Msa1302550:CDS
CAATGGTAAACAGCTTCAGT+GGG 0.535417 8_3:-65126955 Msa1302550:CDS
TCAGCAAGTTCACGAACAAA+CGG 0.535503 8_3:+65126363 None:intergenic
GTGTGAAACCTGCTCAGCTA+TGG 0.536035 8_3:+65124106 None:intergenic
TGCATGAGATGCTCATTGAC+AGG 0.536076 8_3:-65125777 Msa1302550:CDS
TCCTTTGTTGAACAATGTTG+AGG 0.537083 8_3:-65126289 Msa1302550:CDS
CTTGAGTACTTCAGCTTCTG+TGG 0.540272 8_3:-65124458 Msa1302550:CDS
TCAATGGTAAACAGCTTCAG+TGG 0.541769 8_3:-65126956 Msa1302550:CDS
CTGCAAGCAAATATTGGACA+TGG 0.544945 8_3:-65124300 Msa1302550:CDS
CCTCAGCACACCGGGGCCAG+TGG 0.547426 8_3:+65125660 None:intergenic
ACAGGCATAGATGAATAAGC+TGG 0.547667 8_3:+65121994 None:intergenic
GGTTCTAGCGGCGGCGATGG+TGG 0.551455 8_3:-65127143 Msa1302550:CDS
GTCCAAGACGTTTCATACGC+AGG 0.552066 8_3:-65126559 Msa1302550:CDS
CGTATAAGGTGAAACATACA+AGG 0.552501 8_3:+65126644 None:intergenic
TGTTCTTGTCCTGCTGCTGG+TGG 0.552538 8_3:+65126193 None:intergenic
GAACGAATTGAAGAAATGAA+AGG 0.552557 8_3:-65127008 Msa1302550:CDS
ATCTTGATTGGATGCTGCGT+GGG 0.555503 8_3:-65124007 Msa1302550:CDS
CACCTCCGGGAATATCATCA+TGG 0.556440 8_3:+65125819 None:intergenic
TTAACAACTTGCCAAGCTTG+AGG 0.558690 8_3:+65126855 None:intergenic
TCATACGCAGGCTGCGCGTG+TGG 0.560611 8_3:-65126547 Msa1302550:CDS
TGTTCAACAAAGGATTAGCA+AGG 0.561790 8_3:+65126298 None:intergenic
AATTTCACTTGCGGCATCTG+AGG 0.561824 8_3:-65126427 Msa1302550:CDS
AGCTGCTGAAATTTCACTTG+CGG 0.565049 8_3:-65126436 Msa1302550:CDS
GTACAGAACATCCTCAAGCT+TGG 0.565129 8_3:-65126866 Msa1302550:CDS
TCCTCAACATTGTTCAACAA+AGG 0.565254 8_3:+65126288 None:intergenic
GGGACTTGTAAATGTGGAGA+CGG 0.565502 8_3:+65122073 None:intergenic
TGTTGCTTACCACCAGCAGC+AGG 0.565851 8_3:-65126202 Msa1302550:CDS
GGTGGTGGTGTTGGTTCTAG+CGG 0.566616 8_3:-65127155 Msa1302550:CDS
AACAAAGGATTAGCAAGGGA+AGG 0.567911 8_3:+65126303 None:intergenic
ACAAAGGATTAGCAAGGGAA+GGG 0.568402 8_3:+65126304 None:intergenic
GAATCACAAAGGGTTGGTGT+TGG 0.569578 8_3:-65126400 Msa1302550:CDS
TGATCAATTAACGGTGGTAG+TGG 0.575081 8_3:-65127431 Msa1302550:five_prime_UTR
GACGTTTATTAGAGAAGTGG+AGG 0.576387 8_3:-65124243 Msa1302550:CDS
TCCAACTAGAGGACAACAGA+TGG 0.577139 8_3:+65121818 None:intergenic
AAACCACTCCCTCAGCACAC+CGG 0.578474 8_3:+65125651 None:intergenic
CTGGTTCGTCATCGGGAGTG+TGG 0.578604 8_3:-65121646 Msa1302550:three_prime_UTR
GGATAAACATACCAGAATTG+GGG 0.580164 8_3:+65125551 None:intergenic
CTGAGGATGAGAATCACAAA+GGG 0.580618 8_3:-65126410 Msa1302550:CDS
AAGACGATCACCAGATTCAT+GGG 0.582622 8_3:+65122053 None:intergenic
TTGATGCATAAGGTGCAAGT+TGG 0.584006 8_3:-65124416 Msa1302550:CDS
TCAATTAACGGTGGTAGTGG+TGG 0.586127 8_3:-65127428 Msa1302550:five_prime_UTR
ACTGACGTTTATTAGAGAAG+TGG 0.586551 8_3:-65124246 Msa1302550:CDS
CATCGTTAAATATGCAAAGA+GGG 0.587269 8_3:-65125908 Msa1302550:CDS
GTGTGCTTTCCAATCTTCGA+CGG 0.588467 8_3:+65123968 None:intergenic
CAAAGGATTAGCAAGGGAAG+GGG 0.590290 8_3:+65126305 None:intergenic
CTTCATTCTTCATGGACCGG+TGG 0.590546 8_3:-65127179 Msa1302550:CDS
GCTCGATTCCAGTCCTCACA+GGG 0.595969 8_3:+65126247 None:intergenic
TCTTGTACTCAAGAATCCAC+TGG 0.597314 8_3:+65125875 None:intergenic
CAGGCATAGATGAATAAGCT+GGG 0.601849 8_3:+65121995 None:intergenic
CCAACTAGAGGACAACAGAT+GGG 0.604467 8_3:+65121819 None:intergenic
GAACAAACACTCGCGGAGTG+TGG 0.604696 8_3:-65126933 Msa1302550:CDS
GGATGAGAATCACAAAGGGT+TGG 0.611943 8_3:-65126406 Msa1302550:CDS
TCATCGTTAAATATGCAAAG+AGG 0.615436 8_3:-65125909 Msa1302550:CDS
GGACTTGTAAATGTGGAGAC+GGG 0.615613 8_3:+65122074 None:intergenic
GTTCAACAAAGGATTAGCAA+GGG 0.616019 8_3:+65126299 None:intergenic
AACATACAAGGTAACAAGAA+CGG 0.618396 8_3:+65126656 None:intergenic
GTGGTAGTGGTGGAAGTAGA+CGG 0.618424 8_3:-65127418 Msa1302550:five_prime_UTR
TTCTCAAAGTATCCAACTAG+AGG 0.620356 8_3:+65121807 None:intergenic
AAAAGGTTAGGGCTTTCGAT+CGG 0.620493 8_3:+65127332 None:intergenic
ATTCATGGGACTTGTAAATG+TGG 0.624672 8_3:+65122067 None:intergenic
ATGAAACGTCTTGGACAATG+AGG 0.626594 8_3:+65126566 None:intergenic
GCGATCCAGCTGTGTCCTGG+TGG 0.633678 8_3:-65124203 Msa1302550:CDS
GAAGTAGACGGCACCGACGA+CGG 0.634475 8_3:-65127406 Msa1302550:five_prime_UTR
AACTTGCTGATAGTTTGTTG+AGG 0.634625 8_3:-65126350 Msa1302550:CDS
AAGAATCCACTGGTGTTCGT+CGG 0.639588 8_3:+65125885 None:intergenic
AGAGGGCCGACGAACACCAG+TGG 0.642356 8_3:-65125891 Msa1302550:CDS
TCACCAATTTCGAAGCTAGG+AGG 0.648868 8_3:-65125849 Msa1302550:CDS
GGTGGTGTTGGTTCTAGCGG+CGG 0.650792 8_3:-65127152 Msa1302550:CDS
GGTAACAAGAACGGAAATGG+CGG 0.652521 8_3:+65126665 None:intergenic
TCTGAGGATGAGAATCACAA+AGG 0.662376 8_3:-65126411 Msa1302550:CDS
GGACAAGAGATTCACTGACA+AGG 0.665008 8_3:-65126082 Msa1302550:CDS
GATCTTGATTGGATGCTGCG+TGG 0.672731 8_3:-65124008 Msa1302550:CDS
TGTATGTTTCACCTTATACG+GGG 0.672887 8_3:-65126641 Msa1302550:CDS
GAAAGATAGAGAGAGCACGC+AGG 0.676105 8_3:+65126030 None:intergenic
TTGTGATGATCAATTAACGG+TGG 0.688137 8_3:-65127437 Msa1302550:five_prime_UTR
GGTGGTAAGCAACACAACCA+CGG 0.692350 8_3:+65126211 None:intergenic
ACTGATTGTACAACAGACGA+AGG 0.701150 8_3:+65126139 None:intergenic
ACCACTCCCTCAGCACACCG+GGG 0.705242 8_3:+65125653 None:intergenic
TACTACGCATTCGACCAACA+AGG 0.708760 8_3:+65126886 None:intergenic
AGCCATGATGATATTCCCGG+AGG 0.709855 8_3:-65125821 Msa1302550:CDS
TGTAGTTAATAGTAAGAACA+GGG 0.714402 8_3:-65124171 Msa1302550:CDS
GAGCAGCAACAGGCTCTCCG+TGG 0.719942 8_3:-65126228 Msa1302550:CDS
TCAGTGGGAACAAACACTCG+CGG 0.732147 8_3:-65126940 Msa1302550:CDS
GGAGGTGAAAGAAGACTACG+AGG 0.770938 8_3:-65125803 Msa1302550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTACAATGATTTTTATT+AGG - chr8_3:65123893-65123912 Msa1302550:intron 10.0%
!! TTAATTTATTTGTAAGAAAG+GGG + chr8_3:65125750-65125769 None:intergenic 15.0%
!! GTTAATTTATTTGTAAGAAA+GGG + chr8_3:65125751-65125770 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAGGAGT+GGG + chr8_3:65126209-65126228 None:intergenic 15.0%
!! TAAAAAAAAAAAAAAAGGAG+TGG + chr8_3:65126210-65126229 None:intergenic 15.0%
!! GGATAAAATATTAATAATAC+AGG - chr8_3:65127594-65127613 Msa1302550:five_prime_UTR 15.0%
!!! TTTTTGTGATGATCAATTAA+CGG - chr8_3:65121867-65121886 Msa1302550:three_prime_UTR 20.0%
!! GCTTACTACTTATATTAATT+TGG - chr8_3:65122550-65122569 Msa1302550:intron 20.0%
!!! TACTTATATTAATTTGGCTT+TGG - chr8_3:65122556-65122575 Msa1302550:intron 20.0%
!!! TGTATTAAGCATTTTTTGAA+TGG - chr8_3:65122710-65122729 Msa1302550:intron 20.0%
!! TGAATATTGAGTAATAGATA+AGG + chr8_3:65124430-65124449 None:intergenic 20.0%
!!! ACGTAATGTGAATTTTAAAT+AGG + chr8_3:65124494-65124513 None:intergenic 20.0%
!!! TTTATGTCTTCTAAAGTAAT+AGG + chr8_3:65124960-65124979 None:intergenic 20.0%
!!! TATTACTTTAGAAGACATAA+AGG - chr8_3:65124959-65124978 Msa1302550:intron 20.0%
!!! TATTTTACCACAACTATATA+GGG - chr8_3:65125575-65125594 Msa1302550:CDS 20.0%
!! TAATTTATTTGTAAGAAAGG+GGG + chr8_3:65125749-65125768 None:intergenic 20.0%
!! GGTTAATTTATTTGTAAGAA+AGG + chr8_3:65125752-65125771 None:intergenic 20.0%
!! AATTATATTCAGTCATTGAA+GGG + chr8_3:65126258-65126277 None:intergenic 20.0%
!! TAATTATATTCAGTCATTGA+AGG + chr8_3:65126259-65126278 None:intergenic 20.0%
!! TCAATGACTGAATATAATTA+TGG - chr8_3:65126259-65126278 Msa1302550:CDS 20.0%
!!! AATTTCAGTCGATATTTTAT+GGG + chr8_3:65126395-65126414 None:intergenic 20.0%
!! GATAAATTAAATATAGCTTG+AGG + chr8_3:65126966-65126985 None:intergenic 20.0%
!!! AAGCTATATTTAATTTATCC+AGG - chr8_3:65126967-65126986 Msa1302550:CDS 20.0%
!! ATTAATAATACAGGATTTGA+AGG - chr8_3:65127603-65127622 Msa1302550:five_prime_UTR 20.0%
!! AAATGTGTTATGTATACATT+TGG - chr8_3:65127736-65127755 Msa1302550:five_prime_UTR 20.0%
! TTCTCATTTCGCAAAATTTA+GGG + chr8_3:65121591-65121610 None:intergenic 25.0%
! ATTCTCATTTCGCAAAATTT+AGG + chr8_3:65121592-65121611 None:intergenic 25.0%
! ATCTGAAAGAAAAATAGAAG+AGG - chr8_3:65121610-65121629 Msa1302550:three_prime_UTR 25.0%
! ATTCGAATGAAGAAATGAAT+AGG + chr8_3:65122215-65122234 None:intergenic 25.0%
! ATTGTTTATGATCTTTGTCA+TGG - chr8_3:65122488-65122507 Msa1302550:intron 25.0%
!!! TACTAGTTTGGGTTTTTTTT+TGG - chr8_3:65122847-65122866 Msa1302550:intron 25.0%
!! TTGAAGGCAAATATCAATTT+TGG + chr8_3:65123200-65123219 None:intergenic 25.0%
! TGATATTTGCCTTCAAAAAA+TGG - chr8_3:65123204-65123223 Msa1302550:intron 25.0%
!! TCTCTATCTTTCAATTTTGA+AGG - chr8_3:65123288-65123307 Msa1302550:intron 25.0%
!! AAGATTTCTAAGCTTTATGA+TGG - chr8_3:65123319-65123338 Msa1302550:intron 25.0%
!! AATCTTTTGAATACATTGCA+CGG - chr8_3:65123569-65123588 Msa1302550:intron 25.0%
! ATATGTTGAACAAGTATTTG+AGG - chr8_3:65123924-65123943 Msa1302550:CDS 25.0%
! CTAAACATTTCTTTATGCAA+AGG + chr8_3:65123957-65123976 None:intergenic 25.0%
!!! AGTATAGAGGTTTTATATCA+TGG + chr8_3:65124267-65124286 None:intergenic 25.0%
!! TTATCTGATTCAACCATTTT+TGG - chr8_3:65124335-65124354 Msa1302550:CDS 25.0%
!!! TATCTGATTCAACCATTTTT+GGG - chr8_3:65124336-65124355 Msa1302550:CDS 25.0%
! TTATCACATGGAAATACAAT+AGG - chr8_3:65124459-65124478 Msa1302550:CDS 25.0%
!!! AACTTTGAAATCATGTTTAG+TGG + chr8_3:65124544-65124563 None:intergenic 25.0%
!!! TTCAAAGTTGTTGTTTTTAG+TGG - chr8_3:65124555-65124574 Msa1302550:intron 25.0%
! AATCAAGAAAATTTCAACAC+AGG + chr8_3:65124604-65124623 None:intergenic 25.0%
! TTTCTTGATTTCTTCTACAT+TGG - chr8_3:65124614-65124633 Msa1302550:intron 25.0%
! TTGTAGTTAATAGTAAGAAC+AGG - chr8_3:65125135-65125154 Msa1302550:intron 25.0%
! TGTAGTTAATAGTAAGAACA+GGG - chr8_3:65125136-65125155 Msa1302550:intron 25.0%
! GTATGTTGATCTTCTTATAA+AGG - chr8_3:65125163-65125182 Msa1302550:intron 25.0%
!! ATATTCAGATATCTTGGTTT+TGG - chr8_3:65125390-65125409 Msa1302550:intron 25.0%
!!! TATTCAGATATCTTGGTTTT+GGG - chr8_3:65125391-65125410 Msa1302550:intron 25.0%
!! GTATTTTACCACAACTATAT+AGG - chr8_3:65125574-65125593 Msa1302550:CDS 25.0%
! AACAAGAGTTGTTAATAAGA+GGG + chr8_3:65125695-65125714 None:intergenic 25.0%
! TTTCAGTTGCAAGTAAAATT+GGG + chr8_3:65125940-65125959 None:intergenic 25.0%
! ATTATATTCAGTCATTGAAG+GGG + chr8_3:65126257-65126276 None:intergenic 25.0%
! ATGACTGAATATAATTATGG+TGG - chr8_3:65126262-65126281 Msa1302550:CDS 25.0%
! TGACTGAATATAATTATGGT+GGG - chr8_3:65126263-65126282 Msa1302550:CDS 25.0%
!! GAATTTCAGTCGATATTTTA+TGG + chr8_3:65126396-65126415 None:intergenic 25.0%
! GAAAAAAAGTAAGAAGAATG+AGG + chr8_3:65126565-65126584 None:intergenic 25.0%
!! GGATGTAATTTTATTGATCT+TGG - chr8_3:65127557-65127576 Msa1302550:five_prime_UTR 25.0%
! ATCTTGGTCAAATGTTTATA+TGG - chr8_3:65127573-65127592 Msa1302550:five_prime_UTR 25.0%
GAAAGAAAAATAGAAGAGGA+CGG - chr8_3:65121614-65121633 Msa1302550:three_prime_UTR 30.0%
!!! TTTTTGTTTGGGTTGGTTTT+TGG + chr8_3:65121643-65121662 None:intergenic 30.0%
!!! TTTTTTTGTGTGCTTTGTGA+TGG + chr8_3:65121695-65121714 None:intergenic 30.0%
!!! ATCGGAGTCATTTTTTTAGA+CGG + chr8_3:65121960-65121979 None:intergenic 30.0%
! GTTGTTGTTGAAAAAGGTTA+GGG + chr8_3:65121989-65122008 None:intergenic 30.0%
! TGTTGTTGTTGAAAAAGGTT+AGG + chr8_3:65121990-65122009 None:intergenic 30.0%
! GTTGTTGTTGTTGTTGAAAA+AGG + chr8_3:65121995-65122014 None:intergenic 30.0%
!!! AGAATGAAGAGTTGTTTTTG+TGG + chr8_3:65122117-65122136 None:intergenic 30.0%
AAACAACTCTTCATTCTTCA+TGG - chr8_3:65122120-65122139 Msa1302550:CDS 30.0%
TTCATTCGAATGATGTCAAA+AGG - chr8_3:65122224-65122243 Msa1302550:intron 30.0%
! ATTGATTTCACTGTTTCTTC+TGG + chr8_3:65122275-65122294 None:intergenic 30.0%
GAACGAATTGAAGAAATGAA+AGG - chr8_3:65122299-65122318 Msa1302550:intron 30.0%
TTGGCAAGTTGTTAATGATA+TGG - chr8_3:65122460-65122479 Msa1302550:intron 30.0%
TTAATAGATTTAACAGCGTC+AGG + chr8_3:65122524-65122543 None:intergenic 30.0%
AACATACAAGGTAACAAGAA+CGG + chr8_3:65122654-65122673 None:intergenic 30.0%
CTTGTATGTTTCACCTTATA+CGG - chr8_3:65122664-65122683 Msa1302550:intron 30.0%
TTGTATGTTTCACCTTATAC+GGG - chr8_3:65122665-65122684 Msa1302550:intron 30.0%
TGTAAATTGCTTAGTAGAGT+TGG - chr8_3:65122794-65122813 Msa1302550:intron 30.0%
GTAAATTGCTTAGTAGAGTT+GGG - chr8_3:65122795-65122814 Msa1302550:intron 30.0%
GTACGACAAAAAAGATACAA+AGG + chr8_3:65122830-65122849 None:intergenic 30.0%
!!! TCTTTTTTGTCGTACTAGTT+TGG - chr8_3:65122835-65122854 Msa1302550:intron 30.0%
!!! CTTTTTTGTCGTACTAGTTT+GGG - chr8_3:65122836-65122855 Msa1302550:intron 30.0%
!! TGATAGTTTGTTGAGGAATT+TGG - chr8_3:65122964-65122983 Msa1302550:intron 30.0%
!!! ATCTCTTGTCCATTTTTTGA+AGG + chr8_3:65123216-65123235 None:intergenic 30.0%
TCATCGTTAAATATGCAAAG+AGG - chr8_3:65123398-65123417 Msa1302550:intron 30.0%
CATCGTTAAATATGCAAAGA+GGG - chr8_3:65123399-65123418 Msa1302550:intron 30.0%
! ATCTTTTGAATACATTGCAC+GGG - chr8_3:65123570-65123589 Msa1302550:intron 30.0%
! GAAATCTTGTTCGATCTTTT+GGG + chr8_3:65123735-65123754 None:intergenic 30.0%
! AGAAATCTTGTTCGATCTTT+TGG + chr8_3:65123736-65123755 None:intergenic 30.0%
TGGATAAACATACCAGAATT+GGG + chr8_3:65123760-65123779 None:intergenic 30.0%
TTGGATAAACATACCAGAAT+TGG + chr8_3:65123761-65123780 None:intergenic 30.0%
! GAGAAGTAAGTTCAGAATTT+TGG + chr8_3:65123780-65123799 None:intergenic 30.0%
TTGAAAATACTCCTAACACA+TGG + chr8_3:65123819-65123838 None:intergenic 30.0%
!! TAGCTTGCATTTTTCTGATT+TGG - chr8_3:65123866-65123885 Msa1302550:intron 30.0%
! TCTCTCACTATTGTTTCTTA+GGG + chr8_3:65123990-65124009 None:intergenic 30.0%
! TTCTCTCACTATTGTTTCTT+AGG + chr8_3:65123991-65124010 None:intergenic 30.0%
TTTGTAAGGTTAATGAAGTG+AGG + chr8_3:65124045-65124064 None:intergenic 30.0%
TGCAATAGTTTAGTGAAAAC+CGG - chr8_3:65124104-65124123 Msa1302550:CDS 30.0%
AAACTTTCGTACAAGTATAG+AGG + chr8_3:65124280-65124299 None:intergenic 30.0%
!! ATCTGATTCAACCATTTTTG+GGG - chr8_3:65124337-65124356 Msa1302550:CDS 30.0%
!!! AGTTGTTGTTTTTAGTGGAT+AGG - chr8_3:65124560-65124579 Msa1302550:intron 30.0%
TTAACAATTACGACTGAAAC+AGG + chr8_3:65124647-65124666 None:intergenic 30.0%
GAAAAAAGACAAGTTACACT+GGG + chr8_3:65124685-65124704 None:intergenic 30.0%
AGAAAAAAGACAAGTTACAC+TGG + chr8_3:65124686-65124705 None:intergenic 30.0%
GACAAAGGATAAGTTAAACT+GGG + chr8_3:65124790-65124809 None:intergenic 30.0%
AGACAAAGGATAAGTTAAAC+TGG + chr8_3:65124791-65124810 None:intergenic 30.0%
!! AGCTTTAAACAAGTAGACAA+AGG + chr8_3:65124805-65124824 None:intergenic 30.0%
!! TTCATTGATTCAGATGCATT+AGG - chr8_3:65125038-65125057 Msa1302550:intron 30.0%
ACACAGATATTCAGATATCT+TGG - chr8_3:65125384-65125403 Msa1302550:intron 30.0%
TGACTAGTGACAAGTATATA+GGG - chr8_3:65125497-65125516 Msa1302550:intron 30.0%
! AGATTTTCCCTATATAGTTG+TGG + chr8_3:65125585-65125604 None:intergenic 30.0%
GAACAAGAGTTGTTAATAAG+AGG + chr8_3:65125696-65125715 None:intergenic 30.0%
TATTAACAACTCTTGTTCAC+AGG - chr8_3:65125698-65125717 Msa1302550:CDS 30.0%
TGAAGGGATTTAACAAATCA+GGG - chr8_3:65125866-65125885 Msa1302550:CDS 30.0%
TAAACAAATGCCAAGTCATT+TGG + chr8_3:65125908-65125927 None:intergenic 30.0%
CTTTCAGTTGCAAGTAAAAT+TGG + chr8_3:65125941-65125960 None:intergenic 30.0%
! TTTTCATTGGACAATGTGTA+AGG + chr8_3:65126103-65126122 None:intergenic 30.0%
! TGGTGATACATCATTTTCAT+TGG + chr8_3:65126116-65126135 None:intergenic 30.0%
!! ATATACACCACTTTTCACTA+CGG - chr8_3:65126183-65126202 Msa1302550:CDS 30.0%
GTCATTGGAAGAAAAAAAAC+GGG + chr8_3:65126432-65126451 None:intergenic 30.0%
GGTCATTGGAAGAAAAAAAA+CGG + chr8_3:65126433-65126452 None:intergenic 30.0%
!!! ACAATGGTTTTTGCCATTTT+TGG - chr8_3:65126461-65126480 Msa1302550:CDS 30.0%
AATCAACACCAAACCAAAAA+TGG + chr8_3:65126477-65126496 None:intergenic 30.0%
! TTTAGAAGGAAGTACACAAA+TGG + chr8_3:65126671-65126690 None:intergenic 30.0%
ATTTGTGTACTTCCTTCTAA+AGG - chr8_3:65126670-65126689 Msa1302550:CDS 30.0%
!! TCAATATCTTAGTCTTGTAG+AGG + chr8_3:65126741-65126760 None:intergenic 30.0%
ATGGTATCAGAAATGAAGAA+GGG + chr8_3:65126800-65126819 None:intergenic 30.0%
CTTTCAGTTTAAACACATGA+TGG + chr8_3:65126819-65126838 None:intergenic 30.0%
ATTGCAGAACAAAATATCTG+AGG + chr8_3:65127020-65127039 None:intergenic 30.0%
ACAGTCTGTTTGAAAAAACT+TGG - chr8_3:65127110-65127129 Msa1302550:CDS 30.0%
! AGAAGGTTCTTCTTTTCTTT+TGG - chr8_3:65127164-65127183 Msa1302550:CDS 30.0%
GTGAAATATTTACCAGTTGA+AGG - chr8_3:65127193-65127212 Msa1302550:CDS 30.0%
! TAAAAGCATGTATGAGATGA+AGG + chr8_3:65127280-65127299 None:intergenic 30.0%
! CATCTCATACATGCTTTTAT+CGG - chr8_3:65127281-65127300 Msa1302550:CDS 30.0%
! AAGTTGTCAAAGTTCTGTTT+TGG - chr8_3:65127522-65127541 Msa1302550:five_prime_UTR 30.0%
TTGTGATGATCAATTAACGG+TGG - chr8_3:65121870-65121889 Msa1302550:three_prime_UTR 35.0%
! GTCTTCGTCTAATTTTCGTT+TGG + chr8_3:65122036-65122055 None:intergenic 35.0%
! GAATTCCTCTTTTTGAACAG+AGG - chr8_3:65122321-65122340 Msa1302550:intron 35.0%
ATCAACCTCTGTTCAAAAAG+AGG + chr8_3:65122329-65122348 None:intergenic 35.0%
!! GAACAGAGGTTGATTTTCAA+TGG - chr8_3:65122335-65122354 Msa1302550:intron 35.0%
! TCAGCATCAAGTTTAGGTTT+AGG + chr8_3:65122584-65122603 None:intergenic 35.0%
CGTATAAGGTGAAACATACA+AGG + chr8_3:65122666-65122685 None:intergenic 35.0%
TGTATGTTTCACCTTATACG+GGG - chr8_3:65122666-65122685 Msa1302550:intron 35.0%
!! AACTTGCTGATAGTTTGTTG+AGG - chr8_3:65122957-65122976 Msa1302550:intron 35.0%
! GTTCAACAAAGGATTAGCAA+GGG + chr8_3:65123011-65123030 None:intergenic 35.0%
! TGTTCAACAAAGGATTAGCA+AGG + chr8_3:65123012-65123031 None:intergenic 35.0%
TCCTTTGTTGAACAATGTTG+AGG - chr8_3:65123018-65123037 Msa1302550:intron 35.0%
TCCTCAACATTGTTCAACAA+AGG + chr8_3:65123022-65123041 None:intergenic 35.0%
TTTAGCCATGATGATATTCC+CGG - chr8_3:65123483-65123502 Msa1302550:intron 35.0%
TTCAAAAATGAAGAAGCCAC+TGG - chr8_3:65123631-65123650 Msa1302550:intron 35.0%
GGATAAACATACCAGAATTG+GGG + chr8_3:65123759-65123778 None:intergenic 35.0%
! CTCTCACTATTGTTTCTTAG+GGG + chr8_3:65123989-65124008 None:intergenic 35.0%
GCAATAGTTTAGTGAAAACC+GGG - chr8_3:65124105-65124124 Msa1302550:CDS 35.0%
TGATAGACAAACAAACAACC+CGG + chr8_3:65124126-65124145 None:intergenic 35.0%
CTCCAATTTGATGAAATCCT+TGG - chr8_3:65124178-65124197 Msa1302550:CDS 35.0%
CTCCAAGGATTTCATCAAAT+TGG + chr8_3:65124183-65124202 None:intergenic 35.0%
CAATTTGATGAAATCCTTGG+AGG - chr8_3:65124181-65124200 Msa1302550:CDS 35.0%
TTCATTGATATAGTCCTCCA+AGG + chr8_3:65124198-65124217 None:intergenic 35.0%
TGGAGGACTATATCAATGAA+AGG - chr8_3:65124198-65124217 Msa1302550:CDS 35.0%
TGAAAGGCAAACATCTCATA+TGG - chr8_3:65124214-65124233 Msa1302550:CDS 35.0%
!! TATCATGGAAGCATTTGTGA+TGG + chr8_3:65124252-65124271 None:intergenic 35.0%
GGAAATGTGGAAGGAAATAT+TGG + chr8_3:65124374-65124393 None:intergenic 35.0%
ATTCTTCAAGAAGCAACAGA+AGG + chr8_3:65124395-65124414 None:intergenic 35.0%
CTTCTTGAAGAATGATGCAT+TGG - chr8_3:65124402-65124421 Msa1302550:CDS 35.0%
TCACGTAGTCATTTATCACA+TGG - chr8_3:65124447-65124466 Msa1302550:CDS 35.0%
! CTACTTGTTTAAAGCTTCCA+AGG - chr8_3:65124704-65124723 Msa1302550:intron 35.0%
! CTACTTGTTTAAAGCTTCCA+AGG - chr8_3:65124704-65124723 Msa1302550:intron 35.0%
ATGCAGATTATGTTGTACCT+TGG + chr8_3:65124829-65124848 None:intergenic 35.0%
!! TGCATTAGCTTTGATGCATA+AGG - chr8_3:65124881-65124900 Msa1302550:intron 35.0%
TTTGCTTGCAGCTTCTATAT+AGG + chr8_3:65124998-65125017 None:intergenic 35.0%
TAGAAGCTGCAAGCAAATAT+TGG - chr8_3:65125001-65125020 Msa1302550:intron 35.0%
ACTGACGTTTATTAGAGAAG+TGG - chr8_3:65125061-65125080 Msa1302550:intron 35.0%
ATTAGAGAAGTGGAGGAATT+AGG - chr8_3:65125071-65125090 Msa1302550:intron 35.0%
!!! ACTACAATGTTTTTTCCACC+AGG + chr8_3:65125122-65125141 None:intergenic 35.0%
AAGAATCTCAGCAAAACCTT+TGG + chr8_3:65125231-65125250 None:intergenic 35.0%
! AACTTTGAAAGAAGAACTGC+TGG + chr8_3:65125268-65125287 None:intergenic 35.0%
TAGAGTCTGAAGATCTTGAT+TGG - chr8_3:65125288-65125307 Msa1302550:intron 35.0%
AAAGCACACACTGAGTATAA+TGG - chr8_3:65125353-65125372 Msa1302550:intron 35.0%
GTGACTAGTGACAAGTATAT+AGG - chr8_3:65125496-65125515 Msa1302550:intron 35.0%
AGAGTTGTTAATAAGAGGGA+GGG + chr8_3:65125691-65125710 None:intergenic 35.0%
AAGAGTTGTTAATAAGAGGG+AGG + chr8_3:65125692-65125711 None:intergenic 35.0%
TTATTTGTAAGAAAGGGGGA+CGG + chr8_3:65125745-65125764 None:intergenic 35.0%
!!! GTTAGAGTCGGTTAGTTTTT+AGG + chr8_3:65125779-65125798 None:intergenic 35.0%
TTAGCAGAAAGAGTTAGAGT+CGG + chr8_3:65125791-65125810 None:intergenic 35.0%
AAGACAAGGTGAAACTTTAG+AGG + chr8_3:65125841-65125860 None:intergenic 35.0%
TCACCTTGTCTTTAATGTGA+AGG - chr8_3:65125849-65125868 Msa1302550:CDS 35.0%
CACCTTGTCTTTAATGTGAA+GGG - chr8_3:65125850-65125869 Msa1302550:CDS 35.0%
ATCCCTTCACATTAAAGACA+AGG + chr8_3:65125855-65125874 None:intergenic 35.0%
GTGAAGGGATTTAACAAATC+AGG - chr8_3:65125865-65125884 Msa1302550:CDS 35.0%
GATTTAACAAATCAGGGACA+GGG - chr8_3:65125872-65125891 Msa1302550:CDS 35.0%
!!! CTCCAAGAGTCATTTTTTCT+GGG - chr8_3:65125967-65125986 Msa1302550:CDS 35.0%
AACCCAGAAAAAATGACTCT+TGG + chr8_3:65125972-65125991 None:intergenic 35.0%
TTCTTCTCTCATCTATGGTT+GGG + chr8_3:65126068-65126087 None:intergenic 35.0%
TTTCTTCTCTCATCTATGGT+TGG + chr8_3:65126069-65126088 None:intergenic 35.0%
!!! GGTTTTTGCCATTTTTGGTT+TGG - chr8_3:65126466-65126485 Msa1302550:CDS 35.0%
CTTTGTCTCATCCTAAACTT+TGG - chr8_3:65126508-65126527 Msa1302550:CDS 35.0%
TTCTGTGTACATTTCTGTCT+TGG - chr8_3:65126582-65126601 Msa1302550:CDS 35.0%
GGAATATCTGGATCAAATCA+TGG - chr8_3:65126639-65126658 Msa1302550:CDS 35.0%
TTTGGTGAAACCACTATTTG+AGG - chr8_3:65126709-65126728 Msa1302550:CDS 35.0%
TTGGTGAAACCACTATTTGA+GGG - chr8_3:65126710-65126729 Msa1302550:CDS 35.0%
!! ATATCTTAGTCTTGTAGAGG+AGG + chr8_3:65126738-65126757 None:intergenic 35.0%
AGCGATATAAGGTCATTTGA+AGG + chr8_3:65126768-65126787 None:intergenic 35.0%
GATGGTATCAGAAATGAAGA+AGG + chr8_3:65126801-65126820 None:intergenic 35.0%
TATCCAGGATCTCTTAATCT+AGG - chr8_3:65126982-65127001 Msa1302550:CDS 35.0%
TGAAAAAACTTGGCAGATAG+TGG - chr8_3:65127120-65127139 Msa1302550:CDS 35.0%
GAAAAAACTTGGCAGATAGT+GGG - chr8_3:65127121-65127140 Msa1302550:CDS 35.0%
AAAAAACTTGGCAGATAGTG+GGG - chr8_3:65127122-65127141 Msa1302550:CDS 35.0%
AATGACAGCTGAAGAAAAGA+AGG - chr8_3:65127147-65127166 Msa1302550:CDS 35.0%
ATTCATGGGACTTGTAAATG+TGG + chr8_3:65127243-65127262 None:intergenic 35.0%
ATTTACAAGTCCCATGAATC+TGG - chr8_3:65127244-65127263 Msa1302550:CDS 35.0%
GTCATTACCCAAGAACATAT+TGG - chr8_3:65127355-65127374 Msa1302550:exon 35.0%
ACTAGAGCCAATATGTTCTT+GGG + chr8_3:65127365-65127384 None:intergenic 35.0%
AACTAGAGCCAATATGTTCT+TGG + chr8_3:65127366-65127385 None:intergenic 35.0%
!!! GAACATATTGGCTCTAGTTT+TGG - chr8_3:65127367-65127386 Msa1302550:five_prime_UTR 35.0%
! TTCTCAAAGTATCCAACTAG+AGG + chr8_3:65127503-65127522 None:intergenic 35.0%
!!! TCTGTTTTGGAAAGTAGTCA+AGG - chr8_3:65127535-65127554 Msa1302550:five_prime_UTR 35.0%
!!! CTGTTTTGGAAAGTAGTCAA+GGG - chr8_3:65127536-65127555 Msa1302550:five_prime_UTR 35.0%
! ACATTCTAGTTAATAGCTGC+TGG - chr8_3:65127642-65127661 Msa1302550:five_prime_UTR 35.0%
!! GTGTCTGTGGGTTTTTGTTT+GGG + chr8_3:65121654-65121673 None:intergenic 40.0%
! TGTGTCTGTGGGTTTTTGTT+TGG + chr8_3:65121655-65121674 None:intergenic 40.0%
!!! TGATGGAACTGAGCGTTTTT+TGG + chr8_3:65121678-65121697 None:intergenic 40.0%
TGATCAATTAACGGTGGTAG+TGG - chr8_3:65121876-65121895 Msa1302550:three_prime_UTR 40.0%
AAAAGGTTAGGGCTTTCGAT+CGG + chr8_3:65121978-65121997 None:intergenic 40.0%
ACTCTTCATTCTTCATGGAC+CGG - chr8_3:65122125-65122144 Msa1302550:CDS 40.0%
TCAATGGTAAACAGCTTCAG+TGG - chr8_3:65122351-65122370 Msa1302550:intron 40.0%
CAATGGTAAACAGCTTCAGT+GGG - chr8_3:65122352-65122371 Msa1302550:intron 40.0%
TTAACAACTTGCCAAGCTTG+AGG + chr8_3:65122455-65122474 None:intergenic 40.0%
GCAGAATCAGCATCAAGTTT+AGG + chr8_3:65122590-65122609 None:intergenic 40.0%
CAAGGTAACAAGAACGGAAA+TGG + chr8_3:65122648-65122667 None:intergenic 40.0%
TTCACCTTATACGGGGAATA+AGG - chr8_3:65122673-65122692 Msa1302550:intron 40.0%
ATGAAACGTCTTGGACAATG+AGG + chr8_3:65122744-65122763 None:intergenic 40.0%
AGCTGCTGAAATTTCACTTG+CGG - chr8_3:65122871-65122890 Msa1302550:intron 40.0%
TCTGAGGATGAGAATCACAA+AGG - chr8_3:65122896-65122915 Msa1302550:intron 40.0%
CTGAGGATGAGAATCACAAA+GGG - chr8_3:65122897-65122916 Msa1302550:intron 40.0%
TCAGCAAGTTCACGAACAAA+CGG + chr8_3:65122947-65122966 None:intergenic 40.0%
GAGGAATTTGGATTTGAGCT+TGG - chr8_3:65122976-65122995 Msa1302550:intron 40.0%
! ACAAAGGATTAGCAAGGGAA+GGG + chr8_3:65123006-65123025 None:intergenic 40.0%
! AACAAAGGATTAGCAAGGGA+AGG + chr8_3:65123007-65123026 None:intergenic 40.0%
ACTGATTGTACAACAGACGA+AGG + chr8_3:65123171-65123190 None:intergenic 40.0%
GAGATTCACTGACAAGGAAA+TGG - chr8_3:65123231-65123250 Msa1302550:intron 40.0%
TGACAAGGAAATGGTGTTTG+AGG - chr8_3:65123240-65123259 Msa1302550:intron 40.0%
TCTTGTACTCAAGAATCCAC+TGG + chr8_3:65123435-65123454 None:intergenic 40.0%
ATGTCACCAATTTCGAAGCT+AGG - chr8_3:65123455-65123474 Msa1302550:intron 40.0%
!!! GTGGTTTCTTTTGGTTTGTC+AGG - chr8_3:65123672-65123691 Msa1302550:intron 40.0%
! TTGTCAGGCACTTTTCAATC+AGG - chr8_3:65123687-65123706 Msa1302550:intron 40.0%
ACAAGATTTCTCCCCAATTC+TGG - chr8_3:65123745-65123764 Msa1302550:intron 40.0%
TAACACATGGCAAACAGCAA+AGG + chr8_3:65123806-65123825 None:intergenic 40.0%
!! TTTGCTGTTTGCCATGTGTT+AGG - chr8_3:65123805-65123824 Msa1302550:intron 40.0%
CTCTTCAGCTGCAATTTGTA+AGG + chr8_3:65124059-65124078 None:intergenic 40.0%
AACATCTCATATGGCAAAGC+AGG - chr8_3:65124223-65124242 Msa1302550:CDS 40.0%
!!! ACCATTTTTGGGGCTGTTTT+AGG - chr8_3:65124347-65124366 Msa1302550:CDS 40.0%
!!! CCATTTTTGGGGCTGTTTTA+GGG - chr8_3:65124348-65124367 Msa1302550:CDS 40.0%
AGAAGCAACAGAAGGAAATG+TGG + chr8_3:65124387-65124406 None:intergenic 40.0%
! ATAGGATTGCTTGTTGCTTG+AGG - chr8_3:65124578-65124597 Msa1302550:intron 40.0%
CCACAATGTATGATGTACCT+TGG + chr8_3:65124724-65124743 None:intergenic 40.0%
CCAAGGTACATCATACATTG+TGG - chr8_3:65124721-65124740 Msa1302550:intron 40.0%
TTGATGCATAAGGTGCAAGT+TGG - chr8_3:65124891-65124910 Msa1302550:intron 40.0%
! TCGCGTGTTTTTCTTGCAAT+TGG - chr8_3:65124926-65124945 Msa1302550:intron 40.0%
! GTGTTTTTCTTGCAATTGGC+TGG - chr8_3:65124930-65124949 Msa1302550:intron 40.0%
TTGCAGCTTCTATATAGGTC+AGG + chr8_3:65124993-65125012 None:intergenic 40.0%
CTGCAAGCAAATATTGGACA+TGG - chr8_3:65125007-65125026 Msa1302550:intron 40.0%
GACGTTTATTAGAGAAGTGG+AGG - chr8_3:65125064-65125083 Msa1302550:intron 40.0%
TTTCCAATCTTCGACGGAAA+TGG + chr8_3:65125336-65125355 None:intergenic 40.0%
!!! TCAGATATCTTGGTTTTGGG+AGG - chr8_3:65125394-65125413 Msa1302550:intron 40.0%
GTGAGTGAATTGAGACCTAA+GGG + chr8_3:65125654-65125673 None:intergenic 40.0%
TGTGAGTGAATTGAGACCTA+AGG + chr8_3:65125655-65125674 None:intergenic 40.0%
!!! GTCGGTTAGTTTTTAGGAGT+TGG + chr8_3:65125773-65125792 None:intergenic 40.0%
!! CTTTAGAGGCGAGTATTGAT+AGG + chr8_3:65125827-65125846 None:intergenic 40.0%
GGATTTAACAAATCAGGGAC+AGG - chr8_3:65125871-65125890 Msa1302550:CDS 40.0%
AAAAAATGACTCTTGGAGGC+AGG + chr8_3:65125965-65125984 None:intergenic 40.0%
CCAGAAAAAATGACTCTTGG+AGG + chr8_3:65125969-65125988 None:intergenic 40.0%
!!! CCTCCAAGAGTCATTTTTTC+TGG - chr8_3:65125966-65125985 Msa1302550:CDS 40.0%
AACAACACTACAGGAACTTC+TGG + chr8_3:65126000-65126019 None:intergenic 40.0%
AGAAGTTCCTGTAGTGTTGT+TGG - chr8_3:65125999-65126018 Msa1302550:CDS 40.0%
! TTCCTGTAGTGTTGTTGGTT+TGG - chr8_3:65126004-65126023 Msa1302550:CDS 40.0%
TCTTCTCTCATCTATGGTTG+GGG + chr8_3:65126067-65126086 None:intergenic 40.0%
GGGATTTCTTCTCTCATCTA+TGG + chr8_3:65126073-65126092 None:intergenic 40.0%
TAGATGAGAGAAGAAATCCC+TGG - chr8_3:65126073-65126092 Msa1302550:CDS 40.0%
ACAATGTGTAAGGTCATCCA+GGG + chr8_3:65126093-65126112 None:intergenic 40.0%
AATATTAAGCATCACCCAGC+AGG + chr8_3:65126151-65126170 None:intergenic 40.0%
TTTCTTCCAATGACCAACAC+AGG - chr8_3:65126438-65126457 Msa1302550:CDS 40.0%
CAAAAACCATTGTCCTGTGT+TGG + chr8_3:65126454-65126473 None:intergenic 40.0%
AAGAAGAATGAGGAGAGCTA+GGG + chr8_3:65126555-65126574 None:intergenic 40.0%
TAAGAAGAATGAGGAGAGCT+AGG + chr8_3:65126556-65126575 None:intergenic 40.0%
ATATTCCTGTCAAGAAGCCA+AGG + chr8_3:65126626-65126645 None:intergenic 40.0%
TCACCAAAAAGACGTCATGA+AGG + chr8_3:65126697-65126716 None:intergenic 40.0%
GAAATGAAGAAGGGTTGAGT+GGG + chr8_3:65126791-65126810 None:intergenic 40.0%
AGAAATGAAGAAGGGTTGAG+TGG + chr8_3:65126792-65126811 None:intergenic 40.0%
CAACCTAGATTAAGAGATCC+TGG + chr8_3:65126988-65127007 None:intergenic 40.0%
AAGACGATCACCAGATTCAT+GGG + chr8_3:65127257-65127276 None:intergenic 40.0%
CAGGCATAGATGAATAAGCT+GGG + chr8_3:65127315-65127334 None:intergenic 40.0%
ACAGGCATAGATGAATAAGC+TGG + chr8_3:65127316-65127335 None:intergenic 40.0%
!!! TTGGCTCTAGTTTTGGTACT+TGG - chr8_3:65127374-65127393 Msa1302550:five_prime_UTR 40.0%
! TGCAGCTTTGTACAGACTAT+AGG - chr8_3:65127460-65127479 Msa1302550:five_prime_UTR 40.0%
!! CTGTGGGTTTTTGTTTGGGT+TGG + chr8_3:65121650-65121669 None:intergenic 45.0%
!!! GCGTTTTTTGGTGTGTCTGT+GGG + chr8_3:65121666-65121685 None:intergenic 45.0%
!!! AGCGTTTTTTGGTGTGTCTG+TGG + chr8_3:65121667-65121686 None:intergenic 45.0%
!! TCAATTAACGGTGGTAGTGG+TGG - chr8_3:65121879-65121898 Msa1302550:three_prime_UTR 45.0%
GACGCTAATCTTCACCTTGT+TGG - chr8_3:65122407-65122426 Msa1302550:intron 45.0%
TACTACGCATTCGACCAACA+AGG + chr8_3:65122424-65122443 None:intergenic 45.0%
GTACAGAACATCCTCAAGCT+TGG - chr8_3:65122441-65122460 Msa1302550:intron 45.0%
GGTAACAAGAACGGAAATGG+CGG + chr8_3:65122645-65122664 None:intergenic 45.0%
!! CAAGCCTTATTCCCCGTATA+AGG + chr8_3:65122680-65122699 None:intergenic 45.0%
AATTTCACTTGCGGCATCTG+AGG - chr8_3:65122880-65122899 Msa1302550:intron 45.0%
GGATGAGAATCACAAAGGGT+TGG - chr8_3:65122901-65122920 Msa1302550:intron 45.0%
!! GAATCACAAAGGGTTGGTGT+TGG - chr8_3:65122907-65122926 Msa1302550:intron 45.0%
! CAAAGGATTAGCAAGGGAAG+GGG + chr8_3:65123005-65123024 None:intergenic 45.0%
!! AAGCCTTTTTAGTCCCTGTG+AGG - chr8_3:65123047-65123066 Msa1302550:intron 45.0%
AGTCCTCACAGGGACTAAAA+AGG + chr8_3:65123053-65123072 None:intergenic 45.0%
!! TTTTTAGTCCCTGTGAGGAC+TGG - chr8_3:65123052-65123071 Msa1302550:intron 45.0%
CAGCAGGACAAGAACAAGAA+TGG - chr8_3:65123121-65123140 Msa1302550:intron 45.0%
GGACAAGAGATTCACTGACA+AGG - chr8_3:65123225-65123244 Msa1302550:intron 45.0%
AAGAATCCACTGGTGTTCGT+CGG + chr8_3:65123425-65123444 None:intergenic 45.0%
TCACCAATTTCGAAGCTAGG+AGG - chr8_3:65123458-65123477 Msa1302550:intron 45.0%
ATGCCTCCTAGCTTCGAAAT+TGG + chr8_3:65123464-65123483 None:intergenic 45.0%
TCGTAGTCTTCTTTCACCTC+CGG + chr8_3:65123505-65123524 None:intergenic 45.0%
TGCATGAGATGCTCATTGAC+AGG - chr8_3:65123530-65123549 Msa1302550:intron 45.0%
! TCTTGTTCGATCTTTTGGGC+AGG + chr8_3:65123731-65123750 None:intergenic 45.0%
CAAATTGCAGCTGAAGAGTG+AGG - chr8_3:65124061-65124080 Msa1302550:CDS 45.0%
GCTGAAGAGTGAGGATTTAG+TGG - chr8_3:65124070-65124089 Msa1302550:CDS 45.0%
CCCTAAAACAGCCCCAAAAA+TGG + chr8_3:65124351-65124370 None:intergenic 45.0%
GCAACAGAAGGAAATGTGGA+AGG + chr8_3:65124383-65124402 None:intergenic 45.0%
! TTAGTGGCAAAAAGCGCATG+TGG + chr8_3:65124528-65124547 None:intergenic 45.0%
CTTGAGTACTTCAGCTTCTG+TGG - chr8_3:65124849-65124868 Msa1302550:intron 45.0%
AAGTGGAGGAATTAGGACAG+AGG - chr8_3:65125078-65125097 Msa1302550:intron 45.0%
TGTAACATCCATAGCTGAGC+AGG - chr8_3:65125193-65125212 Msa1302550:intron 45.0%
CAGGTTTCACACTTTGCCAA+AGG - chr8_3:65125212-65125231 Msa1302550:intron 45.0%
ATCTTGATTGGATGCTGCGT+GGG - chr8_3:65125300-65125319 Msa1302550:intron 45.0%
! ATGCCATTTCCGTCGAAGAT+TGG - chr8_3:65125330-65125349 Msa1302550:intron 45.0%
GTGTGCTTTCCAATCTTCGA+CGG + chr8_3:65125342-65125361 None:intergenic 45.0%
CTTAGAGACTCTGATGCAGT+GGG + chr8_3:65125533-65125552 None:intergenic 45.0%
TCTTAGAGACTCTGATGCAG+TGG + chr8_3:65125534-65125553 None:intergenic 45.0%
TGAATTGAGACCTAAGGGCA+AGG + chr8_3:65125649-65125668 None:intergenic 45.0%
AGAAAGGGGGACGGAATAAT+TGG + chr8_3:65125736-65125755 None:intergenic 45.0%
!! GGCGAGTATTGATAGGTGAT+CGG + chr8_3:65125820-65125839 None:intergenic 45.0%
TAACAAATCAGGGACAGGGA+CGG - chr8_3:65125876-65125895 Msa1302550:CDS 45.0%
!! TGTAGTGTTGTTGGTTTGGC+CGG - chr8_3:65126008-65126027 Msa1302550:CDS 45.0%
GACAATGTGTAAGGTCATCC+AGG + chr8_3:65126094-65126113 None:intergenic 45.0%
! TATGGGTTGCATTGCACTGA+GGG + chr8_3:65126378-65126397 None:intergenic 45.0%
! TTATGGGTTGCATTGCACTG+AGG + chr8_3:65126379-65126398 None:intergenic 45.0%
! CATTGTCCTGTGTTGGTCAT+TGG + chr8_3:65126447-65126466 None:intergenic 45.0%
CAATGACCAACACAGGACAA+TGG - chr8_3:65126445-65126464 Msa1302550:CDS 45.0%
TGGACGGAGAACCAAAGTTT+AGG + chr8_3:65126522-65126541 None:intergenic 45.0%
! TCTCATCTTGAGTACTGCCT+TGG - chr8_3:65126606-65126625 Msa1302550:CDS 45.0%
GGCTTCTTGACAGGAATATC+TGG - chr8_3:65126627-65126646 Msa1302550:CDS 45.0%
CGTCATGAAGGACCTTTAGA+AGG + chr8_3:65126685-65126704 None:intergenic 45.0%
! GGTCCTTCATGACGTCTTTT+TGG - chr8_3:65126691-65126710 Msa1302550:CDS 45.0%
TTACCAGTTGAAGGCTTTCG+TGG - chr8_3:65127202-65127221 Msa1302550:CDS 45.0%
AAACCACGAAAGCCTTCAAC+TGG + chr8_3:65127208-65127227 None:intergenic 45.0%
AGTTGAAGGCTTTCGTGGTT+TGG - chr8_3:65127207-65127226 Msa1302550:CDS 45.0%
GTTGAAGGCTTTCGTGGTTT+GGG - chr8_3:65127208-65127227 Msa1302550:CDS 45.0%
GGACTTGTAAATGTGGAGAC+GGG + chr8_3:65127236-65127255 None:intergenic 45.0%
GGGACTTGTAAATGTGGAGA+CGG + chr8_3:65127237-65127256 None:intergenic 45.0%
GAAGACGATCACCAGATTCA+TGG + chr8_3:65127258-65127277 None:intergenic 45.0%
TTAAGACGAGCTTGCATGAC+AGG + chr8_3:65127334-65127353 None:intergenic 45.0%
TGGTGAACATACCTGCAATC+TGG - chr8_3:65127394-65127413 Msa1302550:five_prime_UTR 45.0%
CCAGTTTCTTTCCAGATTGC+AGG + chr8_3:65127408-65127427 None:intergenic 45.0%
CCTGCAATCTGGAAAGAAAC+TGG - chr8_3:65127405-65127424 Msa1302550:five_prime_UTR 45.0%
CCAACTAGAGGACAACAGAT+GGG + chr8_3:65127491-65127510 None:intergenic 45.0%
TCCAACTAGAGGACAACAGA+TGG + chr8_3:65127492-65127511 None:intergenic 45.0%
!! AATAGCTGCTGGTTCGTCAT+CGG - chr8_3:65127653-65127672 Msa1302550:five_prime_UTR 45.0%
!! GATAATAAAAAAAAAAAAAA+AGG + chr8_3:65126215-65126234 None:intergenic 5.0%
!! GTGGTAGTGGTGGAAGTAGA+CGG - chr8_3:65121889-65121908 Msa1302550:three_prime_UTR 50.0%
CTTCATTCTTCATGGACCGG+TGG - chr8_3:65122128-65122147 Msa1302550:CDS 50.0%
TCAGTGGGAACAAACACTCG+CGG - chr8_3:65122367-65122386 Msa1302550:intron 50.0%
GTCCAAGACGTTTCATACGC+AGG - chr8_3:65122748-65122767 Msa1302550:intron 50.0%
AGCCTGCGTATGAAACGTCT+TGG + chr8_3:65122753-65122772 None:intergenic 50.0%
!! CAAAGGGTTGGTGTTGGTTC+AGG - chr8_3:65122913-65122932 Msa1302550:intron 50.0%
GGTGGTAAGCAACACAACCA+CGG + chr8_3:65123099-65123118 None:intergenic 50.0%
TCTTGTTCTTGTCCTGCTGC+TGG + chr8_3:65123120-65123139 None:intergenic 50.0%
! GAAAGATAGAGAGAGCACGC+AGG + chr8_3:65123280-65123299 None:intergenic 50.0%
AGCCATGATGATATTCCCGG+AGG - chr8_3:65123486-65123505 Msa1302550:intron 50.0%
CACCTCCGGGAATATCATCA+TGG + chr8_3:65123491-65123510 None:intergenic 50.0%
CGTAGTCTTCTTTCACCTCC+GGG + chr8_3:65123504-65123523 None:intergenic 50.0%
GGAGGTGAAAGAAGACTACG+AGG - chr8_3:65123504-65123523 Msa1302550:intron 50.0%
ACTGCGTGCTGGACTGTTTA+TGG - chr8_3:65123606-65123625 Msa1302550:intron 50.0%
! GCTGAGGGAGTGGTTTCTTT+TGG - chr8_3:65123663-65123682 Msa1302550:intron 50.0%
! TGGCAAAAAGCGCATGTGGT+TGG + chr8_3:65124524-65124543 None:intergenic 50.0%
! TTTTTCCACCAGGACACAGC+TGG + chr8_3:65125112-65125131 None:intergenic 50.0%
GTGTGAAACCTGCTCAGCTA+TGG + chr8_3:65125204-65125223 None:intergenic 50.0%
GATCTTGATTGGATGCTGCG+TGG - chr8_3:65125299-65125318 Msa1302550:intron 50.0%
GTTCTGCAGAGCTGTCACAA+AGG + chr8_3:65125608-65125627 None:intergenic 50.0%
TCTGTAACCACCTTGCCCTT+AGG - chr8_3:65125636-65125655 Msa1302550:CDS 50.0%
ATTGAGACCTAAGGGCAAGG+TGG + chr8_3:65125646-65125665 None:intergenic 50.0%
AACAAATCAGGGACAGGGAC+GGG - chr8_3:65125877-65125896 Msa1302550:CDS 50.0%
ACGGGAACAGCCAAATGACT+TGG - chr8_3:65125895-65125914 Msa1302550:CDS 50.0%
GGCCAAACCAACAACACTAC+AGG + chr8_3:65126009-65126028 None:intergenic 50.0%
AGAAGAGAGGGCTTGAAAGC+AGG + chr8_3:65126038-65126057 None:intergenic 50.0%
TTGGGGACACACAGAAGAGA+GGG + chr8_3:65126050-65126069 None:intergenic 50.0%
CATATGCAGTGTGACCTGCT+GGG - chr8_3:65126134-65126153 Msa1302550:CDS 50.0%
GAGCAACATCCATGGATGAG+AGG + chr8_3:65126327-65126346 None:intergenic 50.0%
AGATGCACGAGCAACATCCA+TGG + chr8_3:65126335-65126354 None:intergenic 50.0%
TGGATGTTGCTCGTGCATCT+CGG - chr8_3:65126335-65126354 Msa1302550:CDS 50.0%
CTAGGGATCTTGGAACTGGA+CGG + chr8_3:65126538-65126557 None:intergenic 50.0%
AGAGCTAGGGATCTTGGAAC+TGG + chr8_3:65126542-65126561 None:intergenic 50.0%
ATGAGGAGAGCTAGGGATCT+TGG + chr8_3:65126548-65126567 None:intergenic 50.0%
TACTGCCTTGGCTTCTTGAC+AGG - chr8_3:65126618-65126637 Msa1302550:CDS 50.0%
GAGGAGGTTCCCTCAAATAG+TGG + chr8_3:65126722-65126741 None:intergenic 50.0%
GGTTGAGTGGGAGCGATATA+AGG + chr8_3:65126779-65126798 None:intergenic 50.0%
CCCATCTGTTGTCCTCTAGT+TGG - chr8_3:65127488-65127507 Msa1302550:five_prime_UTR 50.0%
!! ATAGCTGCTGGTTCGTCATC+GGG - chr8_3:65127654-65127673 Msa1302550:five_prime_UTR 50.0%
!!! GTTGTCGTTTTCGCCGTCGT+CGG + chr8_3:65121917-65121936 None:intergenic 55.0%
CATTCTTCATGGACCGGTGG+TGG - chr8_3:65122131-65122150 Msa1302550:CDS 55.0%
!! GGTGGTGGTGTTGGTTCTAG+CGG - chr8_3:65122152-65122171 Msa1302550:CDS 55.0%
GAACAAACACTCGCGGAGTG+TGG - chr8_3:65122374-65122393 Msa1302550:intron 55.0%
GCTCGATTCCAGTCCTCACA+GGG + chr8_3:65123063-65123082 None:intergenic 55.0%
TGCTCGATTCCAGTCCTCAC+AGG + chr8_3:65123064-65123083 None:intergenic 55.0%
GACTGGAATCGAGCAGCAAC+AGG - chr8_3:65123069-65123088 Msa1302550:intron 55.0%
! TGTTGCTTACCACCAGCAGC+AGG - chr8_3:65123105-65123124 Msa1302550:intron 55.0%
TGTTCTTGTCCTGCTGCTGG+TGG + chr8_3:65123117-65123136 None:intergenic 55.0%
AGTCCAGCACGCAGTGATTC+GGG + chr8_3:65123601-65123620 None:intergenic 55.0%
CAGTCCAGCACGCAGTGATT+CGG + chr8_3:65123602-65123621 None:intergenic 55.0%
AATGAAGAAGCCACTGGCCC+CGG - chr8_3:65123637-65123656 Msa1302550:intron 55.0%
AAACCACTCCCTCAGCACAC+CGG + chr8_3:65123659-65123678 None:intergenic 55.0%
AAAGCGATCCAGCTGTGTCC+TGG - chr8_3:65125101-65125120 Msa1302550:intron 55.0%
GGGCTTGAAAGCAGGCAATC+CGG + chr8_3:65126030-65126049 None:intergenic 55.0%
GTTGGGGACACACAGAAGAG+AGG + chr8_3:65126051-65126070 None:intergenic 55.0%
CCAGCAGGTCACACTGCATA+TGG + chr8_3:65126136-65126155 None:intergenic 55.0%
CCATATGCAGTGTGACCTGC+TGG - chr8_3:65126133-65126152 Msa1302550:CDS 55.0%
GAGTGGGCCGTAGTGAAAAG+TGG + chr8_3:65126193-65126212 None:intergenic 55.0%
GTGCGACATCCTCTCATCCA+TGG - chr8_3:65126315-65126334 Msa1302550:CDS 55.0%
GGTTGCATTGCACTGAGGGT+TGG + chr8_3:65126374-65126393 None:intergenic 55.0%
!! GAAGTAGACGGCACCGACGA+CGG - chr8_3:65121901-65121920 Msa1302550:three_prime_UTR 60.0%
! TCTTCATGGACCGGTGGTGG+TGG - chr8_3:65122134-65122153 Msa1302550:CDS 60.0%
ACCAACACCACCACCACCAC+CGG + chr8_3:65122147-65122166 None:intergenic 60.0%
!! GGTGGTGTTGGTTCTAGCGG+CGG - chr8_3:65122155-65122174 Msa1302550:CDS 60.0%
GATCCCGAATCACTGCGTGC+TGG - chr8_3:65123595-65123614 Msa1302550:intron 60.0%
AACCACTCCCTCAGCACACC+GGG + chr8_3:65123658-65123677 None:intergenic 60.0%
! CTGGTTCGTCATCGGGAGTG+TGG - chr8_3:65127661-65127680 Msa1302550:five_prime_UTR 60.0%
!! TCATGGACCGGTGGTGGTGG+TGG - chr8_3:65122137-65122156 Msa1302550:CDS 65.0%
!! ACCGGTGGTGGTGGTGGTGT+TGG - chr8_3:65122143-65122162 Msa1302550:CDS 65.0%
!! GTTGGTTCTAGCGGCGGCGA+TGG - chr8_3:65122161-65122180 Msa1302550:CDS 65.0%
TCATACGCAGGCTGCGCGTG+TGG - chr8_3:65122760-65122779 Msa1302550:intron 65.0%
GAGCAGCAACAGGCTCTCCG+TGG - chr8_3:65123079-65123098 Msa1302550:intron 65.0%
AGAGGGCCGACGAACACCAG+TGG - chr8_3:65123416-65123435 Msa1302550:intron 65.0%
ACCACTCCCTCAGCACACCG+GGG + chr8_3:65123657-65123676 None:intergenic 65.0%
GCGATCCAGCTGTGTCCTGG+TGG - chr8_3:65125104-65125123 Msa1302550:intron 65.0%
! GGTTCTAGCGGCGGCGATGG+TGG - chr8_3:65122164-65122183 Msa1302550:CDS 70.0%
! TCTAGCGGCGGCGATGGTGG+TGG - chr8_3:65122167-65122186 Msa1302550:CDS 70.0%
CACTGGCCCCGGTGTGCTGA+GGG - chr8_3:65123648-65123667 Msa1302550:intron 70.0%
GCAGGCTGCGCGTGTGGCGT+TGG - chr8_3:65122766-65122785 Msa1302550:intron 75.0%
CCTCAGCACACCGGGGCCAG+TGG + chr8_3:65123650-65123669 None:intergenic 75.0%
CCACTGGCCCCGGTGTGCTG+AGG - chr8_3:65123647-65123666 Msa1302550:intron 75.0%
GCCCCGGTGTGCTGAGGGAG+TGG - chr8_3:65123653-65123672 Msa1302550:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 65121569 65127760 65121569 ID=Msa1302550;Name=Msa1302550
chr8_3 mRNA 65121569 65127760 65121569 ID=Msa1302550-mRNA-1;Parent=Msa1302550;Name=Msa1302550-mRNA-1;_AED=0.02;_eAED=0.02;_QI=400|1|1|1|1|1|3|361|884
chr8_3 exon 65121569 65122193 65121569 ID=Msa1302550-mRNA-1:exon:19747;Parent=Msa1302550-mRNA-1
chr8_3 exon 65123914 65124506 65123914 ID=Msa1302550-mRNA-1:exon:19746;Parent=Msa1302550-mRNA-1
chr8_3 exon 65125563 65127760 65125563 ID=Msa1302550-mRNA-1:exon:19745;Parent=Msa1302550-mRNA-1
chr8_3 five_prime_UTR 65127361 65127760 65127361 ID=Msa1302550-mRNA-1:five_prime_utr;Parent=Msa1302550-mRNA-1
chr8_3 CDS 65125563 65127360 65125563 ID=Msa1302550-mRNA-1:cds;Parent=Msa1302550-mRNA-1
chr8_3 CDS 65123914 65124506 65123914 ID=Msa1302550-mRNA-1:cds;Parent=Msa1302550-mRNA-1
chr8_3 CDS 65121930 65122193 65121930 ID=Msa1302550-mRNA-1:cds;Parent=Msa1302550-mRNA-1
chr8_3 three_prime_UTR 65121569 65121929 65121569 ID=Msa1302550-mRNA-1:three_prime_utr;Parent=Msa1302550-mRNA-1
Gene Sequence

>Msa1302550

ATGACTCCGATCGAAAGCCCTAACCTTTTTCAACAACAACAACAACAACAAAATCGTTCTTCGTCCAAACGAAAATTAGACGAAGACGACGAAAACAACGCGTTAGATGATGACTTAGTCTATGTTAGAATGAGAAAAGACGAAACCACAAAAACAACTCTTCATTCTTCATGGACCGGTGGTGGTGGTGGTGTTGGTTCTAGCGGCGGCGATGGTGGTGGTGTTTTCTCTAAGAAAAAATCACCTATTCATTTCTTCATTCGAATGATGTCAAAAGGATACAACGTTGTTATACACGCTTATCCAGAAGAAACAGTGAAATCAATTCACGAACGAATTGAAGAAATGAAAGGAATTCCTCTTTTTGAACAGAGGTTGATTTTCAATGGTAAACAGCTTCAGTGGGAACAAACACTCGCGGAGTGTGGAATTCAAAACGACGCTAATCTTCACCTTGTTGGTCGAATGCGTAGTACAGAACATCCTCAAGCTTGGCAAGTTGTTAATGATATGGTTTCTATTGTTTATGATCTTTGTCATGGTGTTAATCTTCCTGACGCTGTTAAATCTATTAAGAGTTTGCTTACTACTTATATTAATTTGGCTTTGGCACCTAAACCTAAACTTGATGCTGATTCTGCTACTAGTTATTTTCAGATTTTCATGAATTCTTCCGCCATTTCCGTTCTTGTTACCTTGTATGTTTCACCTTATACGGGGAATAAGGCTTGTTCTGATACTTGTATTAAGCATTTTTTGAATGGTTGTAAAACCTCATTGTCCAAGACGTTTCATACGCAGGCTGCGCGTGTGGCGTTGGAGTTTTGTAAATTGCTTAGTAGAGTTGGGACTAATGATCCTTTGTATCTTTTTTGTCGTACTAGTTTGGGTTTTTTTTTGGAAGCTGCTGAAATTTCACTTGCGGCATCTGAGGATGAGAATCACAAAGGGTTGGTGTTGGTTCAGGATTTGTTTCCGTTTGTTCGTGAACTTGCTGATAGTTTGTTGAGGAATTTGGATTTGAGCTTGGAATCCCCTTCCCTTGCTAATCCTTTGTTGAACAATGTTGAGGATTTTCAAGCCTTTTTAGTCCCTGTGAGGACTGGAATCGAGCAGCAACAGGCTCTCCGTGGTTGTGTTGCTTACCACCAGCAGCAGGACAAGAACAAGAATGGATTAGTTGCTGAAGAGATTGAATACCTTCGTCTGTTGTACAATCAGTTGTTGTCCAAAATTGATATTTGCCTTCAAAAAATGGACAAGAGATTCACTGACAAGGAAATGGTGTTTGAGGAAAATTATTTTTATCCTGCGTGCTCTCTCTATCTTTCAATTTTGAAGGAATTGCATAAGATTTCTAAGCTTTATGATGGTGCTACAGAAGAGCTCTGTCATATTTTGATGTGTCGAAAGAGTGTGATGTGTCTGATCATCGTTAAATATGCAAAGAGGGCCGACGAACACCAGTGGATTCTTGAGTACAAGAATGTCACCAATTTCGAAGCTAGGAGGCATTTAGCCATGATGATATTCCCGGAGGTGAAAGAAGACTACGAGGAGTTGCATGAGATGCTCATTGACAGGTCTCAGCTGTTAACTGAATCTTTTGAATACATTGCACGGGCTGATCCCGAATCACTGCGTGCTGGACTGTTTATGGAATTCAAAAATGAAGAAGCCACTGGCCCCGGTGTGCTGAGGGAGTGGTTTCTTTTGGTTTGTCAGGCACTTTTCAATCAGGAACATGCTCTTTTTGTTGCCTGCCCAAAAGATCGAACAAGATTTCTCCCCAATTCTGCTTCCAAGGTACAACATAATCTGCATCTTGAGTACTTCAGCTTCTGTGGTCGAGTTATTGCATTAGCTTTGATGCATAAGGTGCAAGTTGGTATTGTTTTTGATCGCGTGTTTTTCTTGCAATTGGCTGGAAAGCCTATTACTTTAGAAGACATAAAGGATGCAGATCCTGACCTATATAGAAGCTGCAAGCAAATATTGGACATGGATTCTGATTTCATTGATTCAGATGCATTAGGACTGACGTTTATTAGAGAAGTGGAGGAATTAGGACAGAGGAAAGCGATCCAGCTGTGTCCTGGTGGAAAAAACATTGTAGTTAATAGTAAGAACAGGGTGAAGTATGTTGATCTTCTTATAAAGGATCGTTTTGTAACATCCATAGCTGAGCAGGTTTCACACTTTGCCAAAGGTTTTGCTGAGATTCTTTCAAGTTCAAAGCTCCAGCAGTTCTTCTTTCAAAGTTTAGAGTCTGAAGATCTTGATTGGATGCTGCGTGGGAGTGAAGATGCCATTTCCGTCGAAGATTGGAAAGCACACACTGAGTATAATGGCTATACAGACACAGATATTCAGATATCTTGGTTTTGGGAGATAGTGGGGAGAATGACAGCTGAAGAAAAGAAGGTTCTTCTTTTCTTTTGGACGTCTGTGAAATATTTACCAGTTGAAGGCTTTCGTGGTTTGGGTTCCCGTCTCCACATTTACAAGTCCCATGAATCTGGTGATCGTCTTCCTTCATCTCATACATGCTTTTATCGGCTGTGTTTCCCAGCTTATTCATCTATGCCTGTCATGCAAGCTCGTCTTAAAGTCATTACCCAAGAACATATTGGCTCTAGTTTTGGTACTTGGTGA
Protein sequence

>Msa1302550

MTPIESPNLFQQQQQQQNRSSSKRKLDEDDENNALDDDLVYVRMRKDETTKTTLHSSWTGGGGGVGSSGGDGGGVFSKKKSPIHFFIRMMSKGYNVVIHAYPEETVKSIHERIEEMKGIPLFEQRLIFNGKQLQWEQTLAECGIQNDANLHLVGRMRSTEHPQAWQVVNDMVSIVYDLCHGVNLPDAVKSIKSLLTTYINLALAPKPKLDADSATSYFQIFMNSSAISVLVTLYVSPYTGNKACSDTCIKHFLNGCKTSLSKTFHTQAARVALEFCKLLSRVGTNDPLYLFCRTSLGFFLEAAEISLAASEDENHKGLVLVQDLFPFVRELADSLLRNLDLSLESPSLANPLLNNVEDFQAFLVPVRTGIEQQQALRGCVAYHQQQDKNKNGLVAEEIEYLRLLYNQLLSKIDICLQKMDKRFTDKEMVFEENYFYPACSLYLSILKELHKISKLYDGATEELCHILMCRKSVMCLIIVKYAKRADEHQWILEYKNVTNFEARRHLAMMIFPEVKEDYEELHEMLIDRSQLLTESFEYIARADPESLRAGLFMEFKNEEATGPGVLREWFLLVCQALFNQEHALFVACPKDRTRFLPNSASKVQHNLHLEYFSFCGRVIALALMHKVQVGIVFDRVFFLQLAGKPITLEDIKDADPDLYRSCKQILDMDSDFIDSDALGLTFIREVEELGQRKAIQLCPGGKNIVVNSKNRVKYVDLLIKDRFVTSIAEQVSHFAKGFAEILSSSKLQQFFFQSLESEDLDWMLRGSEDAISVEDWKAHTEYNGYTDTDIQISWFWEIVGRMTAEEKKVLLFFWTSVKYLPVEGFRGLGSRLHIYKSHESGDRLPSSHTCFYRLCFPAYSSMPVMQARLKVITQEHIGSSFGTW*