AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 77 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTTTAATGTAGATTTAA+TGG 0.172058 3_1:+76342869 Msa0376300:three_prime_UTR
TTACCAATTATTATTGTTAT+AGG 0.187069 3_1:+76342820 Msa0376300:three_prime_UTR
TAAATAGAAGTATTCATTAA+AGG 0.227847 3_1:+76343145 Msa0376300:three_prime_UTR
TCCTGGTTGGGGAGCTAAAA+TGG 0.228113 3_1:-76342997 Msa0376290:intron
TCCCATTAAATCTACATTAA+AGG 0.229384 3_1:-76342871 Msa0376290:intron
TCGTTGAAGTTCTTTGTATT+TGG 0.231113 3_1:-76341518 Msa0376290:intron
CTCCCCTCCCTTCTCCTCTA+AGG 0.239651 3_1:-76342958 Msa0376290:intron
ATTCTTCTTCTATTACTAAA+AGG 0.251581 3_1:+76342554 Msa0376300:three_prime_UTR
TATGCGGGAACTATAGTTAT+TGG 0.255362 3_1:+76341426 Msa0376300:CDS
TCATACTCTTCCTCTAGATC+TGG 0.301279 3_1:-76342443 Msa0376290:intron
TCTTCATAGGTGATACAAAA+AGG 0.311553 3_1:-76342591 Msa0376290:intron
AAACCTATAACAATAATAAT+TGG 0.316748 3_1:-76342823 Msa0376290:intron
CCAACCAGGAATAGATGATT+TGG 0.317358 3_1:+76343010 Msa0376300:three_prime_UTR
TTTAGTAATAGAAGAAGAAT+TGG 0.325226 3_1:-76342551 Msa0376290:intron
TCCTTTAATGTAGATTTAAT+GGG 0.326258 3_1:+76342870 Msa0376300:three_prime_UTR
ATGCGGGAACTATAGTTATT+GGG 0.353408 3_1:+76341427 Msa0376300:CDS
TTTGCATGTCAAGTTATGTT+TGG 0.355084 3_1:+76342906 Msa0376300:three_prime_UTR
AACAATAAACAATACCTTAG+AGG 0.359284 3_1:+76342944 Msa0376300:three_prime_UTR
ACAAATTGCTTCCTCTTCAT+AGG 0.360394 3_1:-76342604 Msa0376290:intron
AAATAGAAGTATTCATTAAA+GGG 0.361667 3_1:+76343146 Msa0376300:three_prime_UTR
CAAATCATCTATTCCTGGTT+GGG 0.364404 3_1:-76343009 Msa0376290:intron
CACCGCAATTCACAAAATAT+TGG 0.365865 3_1:-76342711 Msa0376290:intron
TAATCCAAATCATCTATTCC+TGG 0.379671 3_1:-76343014 Msa0376290:intron
ATGGGAAGCCTATACCTTAC+TGG 0.385559 3_1:+76341026 Msa0376300:CDS
GCTGTATAAGCTACATGGTC+TGG 0.393993 3_1:+76341048 Msa0376300:CDS
CAGCCCCTGGCGTTGTAAAT+CGG 0.404084 3_1:-76342504 Msa0376290:intron
TGCAGGAAGCAAAAGAGCTT+TGG 0.404374 3_1:+76342381 Msa0376300:intron
ATAATATTTATTATATTGTA+CGG 0.417893 3_1:+76343109 Msa0376300:three_prime_UTR
TTATACAGCCAGTAAGGTAT+AGG 0.426162 3_1:-76341034 Msa0376290:intron
CTGATATCCTCTAACAAAAC+AGG 0.433610 3_1:+76342764 Msa0376300:three_prime_UTR
CTACATTAAAGGACATTAGT+TGG 0.436257 3_1:-76342860 Msa0376290:intron
CTCGATCGATAAGGATGGGA+TGG 0.476872 3_1:+76341007 Msa0376300:exon
AGCAAAATATTCATCCCTGC+CGG 0.477027 3_1:+76342662 Msa0376300:three_prime_UTR
TTAGAAGATTTAGAGAGTTG+AGG 0.483679 3_1:+76343034 Msa0376300:three_prime_UTR
TAATATTTATTATATTGTAC+GGG 0.486647 3_1:+76343110 Msa0376300:three_prime_UTR
CAACGAAATTACGTCAATTG+AGG 0.486863 3_1:+76341535 Msa0376300:CDS
CTTCTTCTATTACTAAAAGG+AGG 0.491593 3_1:+76342557 Msa0376300:three_prime_UTR
GCAAAATATTCATCCCTGCC+GGG 0.492648 3_1:+76342663 Msa0376300:three_prime_UTR
GAGACAAGCGTGTTAGAAAC+GGG 0.493644 3_1:+76343168 Msa0376300:three_prime_UTR
CTGTATAAGCTACATGGTCT+GGG 0.495612 3_1:+76341049 Msa0376300:CDS
AATTTAAGTGCGAGATATGC+GGG 0.502127 3_1:+76341411 Msa0376300:CDS
AAACAATACCTTAGAGGAGA+AGG 0.503570 3_1:+76342950 Msa0376300:three_prime_UTR
TAAGCTACATGGTCTGGGTC+AGG 0.506287 3_1:+76341054 Msa0376300:CDS
CATACTCTTCCTCTAGATCT+GGG 0.507949 3_1:-76342442 Msa0376290:intron
GAAGAAGAACTCGATCGATA+AGG 0.509083 3_1:+76340998 Msa0376300:five_prime_UTR
CAACATGGGATGCGATGCCT+TGG 0.512114 3_1:+76341491 Msa0376300:CDS
CCAAATCATCTATTCCTGGT+TGG 0.515930 3_1:-76343010 Msa0376290:intron
GGAGACAAGCGTGTTAGAAA+CGG 0.517772 3_1:+76343167 Msa0376300:three_prime_UTR
TTCTTCTATTACTAAAAGGA+GGG 0.520180 3_1:+76342558 Msa0376300:three_prime_UTR
TGTAGCTTATACAGCCAGTA+AGG 0.523342 3_1:-76341040 Msa0376290:intron
ATATACCGATTTACAACGCC+AGG 0.529015 3_1:+76342499 Msa0376300:three_prime_UTR
ATCCCTGCCGGGGAGAAAAG+TGG 0.535612 3_1:+76342674 Msa0376300:three_prime_UTR
AAATCATCTATTCCTGGTTG+GGG 0.542939 3_1:-76343008 Msa0376290:intron
GAAGAGTATGAAGACAAAGA+AGG 0.547972 3_1:+76342455 Msa0376300:three_prime_UTR
AAGAACTCGATCGATAAGGA+TGG 0.550977 3_1:+76341002 Msa0376300:five_prime_UTR
AAAGAATGGCGTCATCAACA+TGG 0.552884 3_1:+76341476 Msa0376300:CDS
TACCTTAGAGGAGAAGGGAG+GGG 0.570577 3_1:+76342956 Msa0376300:three_prime_UTR
TGCGGGAACTATAGTTATTG+GGG 0.570663 3_1:+76341428 Msa0376300:CDS
TCCCTGCCGGGGAGAAAAGT+GGG 0.573395 3_1:+76342675 Msa0376300:three_prime_UTR
CTTCTATTACTAAAAGGAGG+GGG 0.578888 3_1:+76342560 Msa0376300:three_prime_UTR
AGAACTCGATCGATAAGGAT+GGG 0.582074 3_1:+76341003 Msa0376300:five_prime_UTR
ATACCTTAGAGGAGAAGGGA+GGG 0.584826 3_1:+76342955 Msa0376300:three_prime_UTR
GAATTTAAGTGCGAGATATG+CGG 0.584834 3_1:+76341410 Msa0376300:CDS
CAAGTGGCGCCCAGATCTAG+AGG 0.587275 3_1:+76342433 Msa0376300:three_prime_UTR
TCTTCTATTACTAAAAGGAG+GGG 0.587856 3_1:+76342559 Msa0376300:three_prime_UTR
AACAATACCTTAGAGGAGAA+GGG 0.588049 3_1:+76342951 Msa0376300:three_prime_UTR
TCGATCGATAAGGATGGGAT+GGG 0.599470 3_1:+76341008 Msa0376300:exon
TACTGGCTGTATAAGCTACA+TGG 0.603636 3_1:+76341043 Msa0376300:CDS
TCTTTGTATTTGGTATACCA+AGG 0.611780 3_1:-76341508 Msa0376290:intron
AGAGACAAGGAGTGAACAAG+TGG 0.612327 3_1:+76342417 Msa0376300:exon
CAAAATATTCATCCCTGCCG+GGG 0.622348 3_1:+76342664 Msa0376300:three_prime_UTR
AAGAATGGCGTCATCAACAT+GGG 0.625608 3_1:+76341477 Msa0376300:CDS
AAGAAGATACAGCAGAGACA+AGG 0.630262 3_1:+76342404 Msa0376300:CDS
AATACCTTAGAGGAGAAGGG+AGG 0.676129 3_1:+76342954 Msa0376300:three_prime_UTR
TATACCGATTTACAACGCCA+GGG 0.704758 3_1:+76342500 Msa0376300:three_prime_UTR
GCGGGAACTATAGTTATTGG+GGG 0.717346 3_1:+76341429 Msa0376300:CDS
ATACCGATTTACAACGCCAG+GGG 0.730189 3_1:+76342501 Msa0376300:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTTATTATATTGTAC+GGG + chr3_1:76343110-76343129 Msa0376300:three_prime_UTR 10.0%
!! TAATATTTATTATATTGTAC+GGG + chr3_1:76343110-76343129 Msa0376300:three_prime_UTR 10.0%
!! AATAATATAATATGCATTTC+AGG + chr3_1:76341388-76341407 Msa0376300:intron 15.0%
!!! ATATTTTGCAAAATATTTTG+TGG + chr3_1:76342049-76342068 Msa0376300:intron 15.0%
!!! TATTTTGCAAAATATTTTGT+GGG + chr3_1:76342050-76342069 Msa0376300:intron 15.0%
!!! TTTTTTATTCTAATTTCATG+AGG - chr3_1:76342265-76342284 Msa0376290:intron 15.0%
!!! GACAAAAAAACTATTTTTAT+GGG + chr3_1:76342334-76342353 Msa0376300:intron 15.0%
!! TTACCAATTATTATTGTTAT+AGG + chr3_1:76342820-76342839 Msa0376300:three_prime_UTR 15.0%
!! AAACCTATAACAATAATAAT+TGG - chr3_1:76342826-76342845 Msa0376290:intron 15.0%
!!! ATTTTAATGAACATTTCTAT+TGG + chr3_1:76343062-76343081 Msa0376300:three_prime_UTR 15.0%
!!! TTTTAATGAACATTTCTATT+GGG + chr3_1:76343063-76343082 Msa0376300:three_prime_UTR 15.0%
!!! TAAATAGAAGTATTCATTAA+AGG + chr3_1:76343145-76343164 Msa0376300:three_prime_UTR 15.0%
!!! AAATAGAAGTATTCATTAAA+GGG + chr3_1:76343146-76343165 Msa0376300:three_prime_UTR 15.0%
!! AATAATATAATATGCATTTC+AGG + chr3_1:76341388-76341407 Msa0376300:intron 15.0%
!!! ATATTTTGCAAAATATTTTG+TGG + chr3_1:76342049-76342068 Msa0376300:intron 15.0%
!!! TATTTTGCAAAATATTTTGT+GGG + chr3_1:76342050-76342069 Msa0376300:intron 15.0%
!!! TTTTTTATTCTAATTTCATG+AGG - chr3_1:76342265-76342284 Msa0376290:intron 15.0%
!!! GACAAAAAAACTATTTTTAT+GGG + chr3_1:76342334-76342353 Msa0376300:intron 15.0%
!! TTACCAATTATTATTGTTAT+AGG + chr3_1:76342820-76342839 Msa0376300:three_prime_UTR 15.0%
!! AAACCTATAACAATAATAAT+TGG - chr3_1:76342826-76342845 Msa0376290:intron 15.0%
!!! ATTTTAATGAACATTTCTAT+TGG + chr3_1:76343062-76343081 Msa0376300:three_prime_UTR 15.0%
!!! TTTTAATGAACATTTCTATT+GGG + chr3_1:76343063-76343082 Msa0376300:three_prime_UTR 15.0%
!!! TAAATAGAAGTATTCATTAA+AGG + chr3_1:76343145-76343164 Msa0376300:three_prime_UTR 15.0%
!!! AAATAGAAGTATTCATTAAA+GGG + chr3_1:76343146-76343165 Msa0376300:three_prime_UTR 15.0%
!! AAAATTTATCTCTTTACTAG+AGG + chr3_1:76341202-76341221 Msa0376300:intron 20.0%
!!! ATTGACTTAATTAGAAAGTT+AGG + chr3_1:76341316-76341335 Msa0376300:intron 20.0%
!! TTGACTTAATTAGAAAGTTA+GGG + chr3_1:76341317-76341336 Msa0376300:intron 20.0%
!!! GTTTATTTTATGATTCCTTA+TGG + chr3_1:76341344-76341363 Msa0376300:intron 20.0%
!!! AAATTTTGAAACTCAATTTG+CGG + chr3_1:76341995-76342014 Msa0376300:intron 20.0%
!!! ATTTTGCAAAATATTTTGTG+GGG + chr3_1:76342051-76342070 Msa0376300:intron 20.0%
!! TAAATTAGTAGAAAGAGAAT+AGG - chr3_1:76342135-76342154 Msa0376290:intron 20.0%
!!! GGACAAAAAAACTATTTTTA+TGG + chr3_1:76342333-76342352 Msa0376300:intron 20.0%
!! TTTAGTAATAGAAGAAGAAT+TGG - chr3_1:76342554-76342573 Msa0376290:intron 20.0%
!! ATTCTTCTTCTATTACTAAA+AGG + chr3_1:76342554-76342573 Msa0376300:three_prime_UTR 20.0%
!! TCCTTTAATGTAGATTTAAT+GGG + chr3_1:76342870-76342889 Msa0376300:three_prime_UTR 20.0%
!! AAAATTTATCTCTTTACTAG+AGG + chr3_1:76341202-76341221 Msa0376300:intron 20.0%
!!! ATTGACTTAATTAGAAAGTT+AGG + chr3_1:76341316-76341335 Msa0376300:intron 20.0%
!! TTGACTTAATTAGAAAGTTA+GGG + chr3_1:76341317-76341336 Msa0376300:intron 20.0%
!!! GTTTATTTTATGATTCCTTA+TGG + chr3_1:76341344-76341363 Msa0376300:intron 20.0%
!!! AAATTTTGAAACTCAATTTG+CGG + chr3_1:76341995-76342014 Msa0376300:intron 20.0%
!!! ATTTTGCAAAATATTTTGTG+GGG + chr3_1:76342051-76342070 Msa0376300:intron 20.0%
!! TAAATTAGTAGAAAGAGAAT+AGG - chr3_1:76342135-76342154 Msa0376290:intron 20.0%
!!! GGACAAAAAAACTATTTTTA+TGG + chr3_1:76342333-76342352 Msa0376300:intron 20.0%
!! TTTAGTAATAGAAGAAGAAT+TGG - chr3_1:76342554-76342573 Msa0376290:intron 20.0%
!! ATTCTTCTTCTATTACTAAA+AGG + chr3_1:76342554-76342573 Msa0376300:three_prime_UTR 20.0%
!! TCCTTTAATGTAGATTTAAT+GGG + chr3_1:76342870-76342889 Msa0376300:three_prime_UTR 20.0%
! TGACTTAATTAGAAAGTTAG+GGG + chr3_1:76341318-76341337 Msa0376300:intron 25.0%
!!! TTGAACGACATTTTAAAGAA+TGG + chr3_1:76341462-76341481 Msa0376300:CDS 25.0%
! TGATGTCAAATTATTTCAGT+TGG - chr3_1:76341602-76341621 Msa0376290:intron 25.0%
! TGGATGCTATATTTGATTAA+CGG - chr3_1:76341625-76341644 Msa0376290:intron 25.0%
! TAATCAAATATAGCATCCAT+TGG + chr3_1:76341626-76341645 Msa0376300:intron 25.0%
! AATCAAATATAGCATCCATT+GGG + chr3_1:76341627-76341646 Msa0376300:intron 25.0%
!!! TACAAGAAAGTTTTAATGCT+AGG - chr3_1:76341667-76341686 Msa0376290:intron 25.0%
!!! TAACTAGTTTTTTCTTAGCA+GGG - chr3_1:76341805-76341824 Msa0376290:intron 25.0%
!!! ATAACTAGTTTTTTCTTAGC+AGG - chr3_1:76341806-76341825 Msa0376290:intron 25.0%
! TAGTTATCTACTTGTAATCA+CGG + chr3_1:76341819-76341838 Msa0376300:intron 25.0%
! CCATAGTAAAGTATATGATA+GGG - chr3_1:76341873-76341892 Msa0376290:intron 25.0%
!! TTTTGCAAAATATTTTGTGG+GGG + chr3_1:76342052-76342071 Msa0376300:intron 25.0%
! TTTCTACTAATTTATTCCTG+AGG + chr3_1:76342141-76342160 Msa0376300:intron 25.0%
! TTGTCCAAAACTATTTGTAA+AGG - chr3_1:76342319-76342338 Msa0376290:intron 25.0%
! TTCTTCTATTACTAAAAGGA+GGG + chr3_1:76342558-76342577 Msa0376300:three_prime_UTR 25.0%
! GTCCTTTAATGTAGATTTAA+TGG + chr3_1:76342869-76342888 Msa0376300:three_prime_UTR 25.0%
! TCCCATTAAATCTACATTAA+AGG - chr3_1:76342874-76342893 Msa0376290:intron 25.0%
! AACAATAAACAATACCTTAG+AGG + chr3_1:76342944-76342963 Msa0376300:three_prime_UTR 25.0%
! TGACTTAATTAGAAAGTTAG+GGG + chr3_1:76341318-76341337 Msa0376300:intron 25.0%
!!! TTGAACGACATTTTAAAGAA+TGG + chr3_1:76341462-76341481 Msa0376300:CDS 25.0%
! TGATGTCAAATTATTTCAGT+TGG - chr3_1:76341602-76341621 Msa0376290:intron 25.0%
! TGGATGCTATATTTGATTAA+CGG - chr3_1:76341625-76341644 Msa0376290:intron 25.0%
! TAATCAAATATAGCATCCAT+TGG + chr3_1:76341626-76341645 Msa0376300:intron 25.0%
! AATCAAATATAGCATCCATT+GGG + chr3_1:76341627-76341646 Msa0376300:intron 25.0%
!!! TACAAGAAAGTTTTAATGCT+AGG - chr3_1:76341667-76341686 Msa0376290:intron 25.0%
!!! TAACTAGTTTTTTCTTAGCA+GGG - chr3_1:76341805-76341824 Msa0376290:intron 25.0%
!!! ATAACTAGTTTTTTCTTAGC+AGG - chr3_1:76341806-76341825 Msa0376290:intron 25.0%
! TAGTTATCTACTTGTAATCA+CGG + chr3_1:76341819-76341838 Msa0376300:intron 25.0%
! CCATAGTAAAGTATATGATA+GGG - chr3_1:76341873-76341892 Msa0376290:intron 25.0%
!! TTTTGCAAAATATTTTGTGG+GGG + chr3_1:76342052-76342071 Msa0376300:intron 25.0%
! TTTCTACTAATTTATTCCTG+AGG + chr3_1:76342141-76342160 Msa0376300:intron 25.0%
! TTGTCCAAAACTATTTGTAA+AGG - chr3_1:76342319-76342338 Msa0376290:intron 25.0%
! TTCTTCTATTACTAAAAGGA+GGG + chr3_1:76342558-76342577 Msa0376300:three_prime_UTR 25.0%
! GTCCTTTAATGTAGATTTAA+TGG + chr3_1:76342869-76342888 Msa0376300:three_prime_UTR 25.0%
! TCCCATTAAATCTACATTAA+AGG - chr3_1:76342874-76342893 Msa0376290:intron 25.0%
! AACAATAAACAATACCTTAG+AGG + chr3_1:76342944-76342963 Msa0376300:three_prime_UTR 25.0%
! TTTTGCTGGATATATCTCAA+GGG + chr3_1:76341124-76341143 Msa0376300:intron 30.0%
! ATTTTGTAAGTCACCACTTT+GGG - chr3_1:76341187-76341206 Msa0376290:intron 30.0%
! AATTTTGTAAGTCACCACTT+TGG - chr3_1:76341188-76341207 Msa0376290:intron 30.0%
TCAAAATAATGAGAGCCATA+AGG - chr3_1:76341362-76341381 Msa0376290:intron 30.0%
TCTTTGTATTTGGTATACCA+AGG - chr3_1:76341511-76341530 Msa0376290:intron 30.0%
TCGTTGAAGTTCTTTGTATT+TGG - chr3_1:76341521-76341540 Msa0376290:intron 30.0%
ATCAAATATAGCATCCATTG+GGG + chr3_1:76341628-76341647 Msa0376300:intron 30.0%
ATGAAGTATATTTGACTGCA+TGG + chr3_1:76341724-76341743 Msa0376300:intron 30.0%
CCCTATCATATACTTTACTA+TGG + chr3_1:76341870-76341889 Msa0376300:intron 30.0%
GCCATAGTAAAGTATATGAT+AGG - chr3_1:76341874-76341893 Msa0376290:intron 30.0%
! ACTCTGAATATCTTTTCTGT+TGG + chr3_1:76342024-76342043 Msa0376300:intron 30.0%
CAAAACTATTTGTAAAGGAC+TGG - chr3_1:76342314-76342333 Msa0376290:intron 30.0%
! CAGTCCTTTACAAATAGTTT+TGG + chr3_1:76342312-76342331 Msa0376300:intron 30.0%
ACAGAGAATAGTAGCATTTA+AGG - chr3_1:76342361-76342380 Msa0376290:intron 30.0%
CTTCTTCTATTACTAAAAGG+AGG + chr3_1:76342557-76342576 Msa0376300:three_prime_UTR 30.0%
TCTTCTATTACTAAAAGGAG+GGG + chr3_1:76342559-76342578 Msa0376300:three_prime_UTR 30.0%
TCTTCATAGGTGATACAAAA+AGG - chr3_1:76342594-76342613 Msa0376290:intron 30.0%
! TTTTTGTATCACCTATGAAG+AGG + chr3_1:76342593-76342612 Msa0376300:three_prime_UTR 30.0%
!! AAGAGGAAGCAATTTGTTTT+CGG + chr3_1:76342610-76342629 Msa0376300:three_prime_UTR 30.0%
! AGCCAATATTTTGTGAATTG+CGG + chr3_1:76342709-76342728 Msa0376300:three_prime_UTR 30.0%
CTACATTAAAGGACATTAGT+TGG - chr3_1:76342863-76342882 Msa0376290:intron 30.0%
TTTGCATGTCAAGTTATGTT+TGG + chr3_1:76342906-76342925 Msa0376300:three_prime_UTR 30.0%
TAATCCAAATCATCTATTCC+TGG - chr3_1:76343017-76343036 Msa0376290:intron 30.0%
TTAGAAGATTTAGAGAGTTG+AGG + chr3_1:76343034-76343053 Msa0376300:three_prime_UTR 30.0%
! TTTTGCTGGATATATCTCAA+GGG + chr3_1:76341124-76341143 Msa0376300:intron 30.0%
! ATTTTGTAAGTCACCACTTT+GGG - chr3_1:76341187-76341206 Msa0376290:intron 30.0%
! AATTTTGTAAGTCACCACTT+TGG - chr3_1:76341188-76341207 Msa0376290:intron 30.0%
TCAAAATAATGAGAGCCATA+AGG - chr3_1:76341362-76341381 Msa0376290:intron 30.0%
TCTTTGTATTTGGTATACCA+AGG - chr3_1:76341511-76341530 Msa0376290:intron 30.0%
TCGTTGAAGTTCTTTGTATT+TGG - chr3_1:76341521-76341540 Msa0376290:intron 30.0%
ATCAAATATAGCATCCATTG+GGG + chr3_1:76341628-76341647 Msa0376300:intron 30.0%
ATGAAGTATATTTGACTGCA+TGG + chr3_1:76341724-76341743 Msa0376300:intron 30.0%
CCCTATCATATACTTTACTA+TGG + chr3_1:76341870-76341889 Msa0376300:intron 30.0%
GCCATAGTAAAGTATATGAT+AGG - chr3_1:76341874-76341893 Msa0376290:intron 30.0%
! ACTCTGAATATCTTTTCTGT+TGG + chr3_1:76342024-76342043 Msa0376300:intron 30.0%
CAAAACTATTTGTAAAGGAC+TGG - chr3_1:76342314-76342333 Msa0376290:intron 30.0%
! CAGTCCTTTACAAATAGTTT+TGG + chr3_1:76342312-76342331 Msa0376300:intron 30.0%
ACAGAGAATAGTAGCATTTA+AGG - chr3_1:76342361-76342380 Msa0376290:intron 30.0%
CTTCTTCTATTACTAAAAGG+AGG + chr3_1:76342557-76342576 Msa0376300:three_prime_UTR 30.0%
TCTTCTATTACTAAAAGGAG+GGG + chr3_1:76342559-76342578 Msa0376300:three_prime_UTR 30.0%
TCTTCATAGGTGATACAAAA+AGG - chr3_1:76342594-76342613 Msa0376290:intron 30.0%
! TTTTTGTATCACCTATGAAG+AGG + chr3_1:76342593-76342612 Msa0376300:three_prime_UTR 30.0%
!! AAGAGGAAGCAATTTGTTTT+CGG + chr3_1:76342610-76342629 Msa0376300:three_prime_UTR 30.0%
! AGCCAATATTTTGTGAATTG+CGG + chr3_1:76342709-76342728 Msa0376300:three_prime_UTR 30.0%
CTACATTAAAGGACATTAGT+TGG - chr3_1:76342863-76342882 Msa0376290:intron 30.0%
TTTGCATGTCAAGTTATGTT+TGG + chr3_1:76342906-76342925 Msa0376300:three_prime_UTR 30.0%
TAATCCAAATCATCTATTCC+TGG - chr3_1:76343017-76343036 Msa0376290:intron 30.0%
TTAGAAGATTTAGAGAGTTG+AGG + chr3_1:76343034-76343053 Msa0376300:three_prime_UTR 30.0%
TTATACAGCCAGTAAGGTAT+AGG - chr3_1:76341037-76341056 Msa0376290:intron 35.0%
! CTTTTGCTGGATATATCTCA+AGG + chr3_1:76341123-76341142 Msa0376300:intron 35.0%
GAATTTAAGTGCGAGATATG+CGG + chr3_1:76341410-76341429 Msa0376300:CDS 35.0%
AATTTAAGTGCGAGATATGC+GGG + chr3_1:76341411-76341430 Msa0376300:CDS 35.0%
TATGCGGGAACTATAGTTAT+TGG + chr3_1:76341426-76341445 Msa0376300:CDS 35.0%
ATGCGGGAACTATAGTTATT+GGG + chr3_1:76341427-76341446 Msa0376300:CDS 35.0%
CAACGAAATTACGTCAATTG+AGG + chr3_1:76341535-76341554 Msa0376300:CDS 35.0%
GTGATAAAGTTATACCCCAA+TGG - chr3_1:76341645-76341664 Msa0376290:intron 35.0%
TATATTTGACTGCATGGTCT+TGG + chr3_1:76341730-76341749 Msa0376300:intron 35.0%
ATATGTCGTACGACTGTTAA+TGG + chr3_1:76342101-76342120 Msa0376300:intron 35.0%
TTCCTGAGGATTTCATATCT+TGG + chr3_1:76342155-76342174 Msa0376300:intron 35.0%
GCGAATAGATATTGTCACTA+GGG - chr3_1:76342190-76342209 Msa0376290:intron 35.0%
AGCGAATAGATATTGTCACT+AGG - chr3_1:76342191-76342210 Msa0376290:intron 35.0%
TAGTGACAATATCTATTCGC+TGG + chr3_1:76342190-76342209 Msa0376300:intron 35.0%
! GAAGAGTATGAAGACAAAGA+AGG + chr3_1:76342455-76342474 Msa0376300:three_prime_UTR 35.0%
CTTCTATTACTAAAAGGAGG+GGG + chr3_1:76342560-76342579 Msa0376300:three_prime_UTR 35.0%
ACAAATTGCTTCCTCTTCAT+AGG - chr3_1:76342607-76342626 Msa0376290:intron 35.0%
CACCGCAATTCACAAAATAT+TGG - chr3_1:76342714-76342733 Msa0376290:intron 35.0%
CTGATATCCTCTAACAAAAC+AGG + chr3_1:76342764-76342783 Msa0376300:three_prime_UTR 35.0%
!! TTCTTCTCCTGTTTTGTTAG+AGG - chr3_1:76342774-76342793 Msa0376290:intron 35.0%
AAACAATACCTTAGAGGAGA+AGG + chr3_1:76342950-76342969 Msa0376300:three_prime_UTR 35.0%
AACAATACCTTAGAGGAGAA+GGG + chr3_1:76342951-76342970 Msa0376300:three_prime_UTR 35.0%
AAATCATCTATTCCTGGTTG+GGG - chr3_1:76343011-76343030 Msa0376290:intron 35.0%
CAAATCATCTATTCCTGGTT+GGG - chr3_1:76343012-76343031 Msa0376290:intron 35.0%
TTATACAGCCAGTAAGGTAT+AGG - chr3_1:76341037-76341056 Msa0376290:intron 35.0%
! CTTTTGCTGGATATATCTCA+AGG + chr3_1:76341123-76341142 Msa0376300:intron 35.0%
GAATTTAAGTGCGAGATATG+CGG + chr3_1:76341410-76341429 Msa0376300:CDS 35.0%
AATTTAAGTGCGAGATATGC+GGG + chr3_1:76341411-76341430 Msa0376300:CDS 35.0%
TATGCGGGAACTATAGTTAT+TGG + chr3_1:76341426-76341445 Msa0376300:CDS 35.0%
ATGCGGGAACTATAGTTATT+GGG + chr3_1:76341427-76341446 Msa0376300:CDS 35.0%
CAACGAAATTACGTCAATTG+AGG + chr3_1:76341535-76341554 Msa0376300:CDS 35.0%
GTGATAAAGTTATACCCCAA+TGG - chr3_1:76341645-76341664 Msa0376290:intron 35.0%
TATATTTGACTGCATGGTCT+TGG + chr3_1:76341730-76341749 Msa0376300:intron 35.0%
ATATGTCGTACGACTGTTAA+TGG + chr3_1:76342101-76342120 Msa0376300:intron 35.0%
TTCCTGAGGATTTCATATCT+TGG + chr3_1:76342155-76342174 Msa0376300:intron 35.0%
GCGAATAGATATTGTCACTA+GGG - chr3_1:76342190-76342209 Msa0376290:intron 35.0%
AGCGAATAGATATTGTCACT+AGG - chr3_1:76342191-76342210 Msa0376290:intron 35.0%
TAGTGACAATATCTATTCGC+TGG + chr3_1:76342190-76342209 Msa0376300:intron 35.0%
! GAAGAGTATGAAGACAAAGA+AGG + chr3_1:76342455-76342474 Msa0376300:three_prime_UTR 35.0%
CTTCTATTACTAAAAGGAGG+GGG + chr3_1:76342560-76342579 Msa0376300:three_prime_UTR 35.0%
ACAAATTGCTTCCTCTTCAT+AGG - chr3_1:76342607-76342626 Msa0376290:intron 35.0%
CACCGCAATTCACAAAATAT+TGG - chr3_1:76342714-76342733 Msa0376290:intron 35.0%
CTGATATCCTCTAACAAAAC+AGG + chr3_1:76342764-76342783 Msa0376300:three_prime_UTR 35.0%
!! TTCTTCTCCTGTTTTGTTAG+AGG - chr3_1:76342774-76342793 Msa0376290:intron 35.0%
AAACAATACCTTAGAGGAGA+AGG + chr3_1:76342950-76342969 Msa0376300:three_prime_UTR 35.0%
AACAATACCTTAGAGGAGAA+GGG + chr3_1:76342951-76342970 Msa0376300:three_prime_UTR 35.0%
AAATCATCTATTCCTGGTTG+GGG - chr3_1:76343011-76343030 Msa0376290:intron 35.0%
CAAATCATCTATTCCTGGTT+GGG - chr3_1:76343012-76343031 Msa0376290:intron 35.0%
GAAGAAGAACTCGATCGATA+AGG + chr3_1:76340998-76341017 Msa0376300:five_prime_UTR 40.0%
AAGAACTCGATCGATAAGGA+TGG + chr3_1:76341002-76341021 Msa0376300:five_prime_UTR 40.0%
AGAACTCGATCGATAAGGAT+GGG + chr3_1:76341003-76341022 Msa0376300:five_prime_UTR 40.0%
TGTAGCTTATACAGCCAGTA+AGG - chr3_1:76341043-76341062 Msa0376290:intron 40.0%
! TACTGGCTGTATAAGCTACA+TGG + chr3_1:76341043-76341062 Msa0376300:CDS 40.0%
CTGTATAAGCTACATGGTCT+GGG + chr3_1:76341049-76341068 Msa0376300:CDS 40.0%
!! TGAACTGTCGTTTCTTTTGC+TGG + chr3_1:76341110-76341129 Msa0376300:intron 40.0%
GAGGAGCAGATAAAAGCAAA+AGG + chr3_1:76341221-76341240 Msa0376300:intron 40.0%
TGCGGGAACTATAGTTATTG+GGG + chr3_1:76341428-76341447 Msa0376300:CDS 40.0%
AAAGAATGGCGTCATCAACA+TGG + chr3_1:76341476-76341495 Msa0376300:CDS 40.0%
AAGAATGGCGTCATCAACAT+GGG + chr3_1:76341477-76341496 Msa0376300:CDS 40.0%
!!! GTTTTTTCTTAGCAGGGAAG+AGG - chr3_1:76341799-76341818 Msa0376290:intron 40.0%
! TGCAAAATATTTTGTGGGGG+TGG + chr3_1:76342055-76342074 Msa0376300:intron 40.0%
! GCAAAATATTTTGTGGGGGT+GGG + chr3_1:76342056-76342075 Msa0376300:intron 40.0%
! CAAAATATTTTGTGGGGGTG+GGG + chr3_1:76342057-76342076 Msa0376300:intron 40.0%
GACCAAGATATGAAATCCTC+AGG - chr3_1:76342160-76342179 Msa0376290:intron 40.0%
ATGCTACTATTCTCTGTTGC+AGG + chr3_1:76342364-76342383 Msa0376300:intron 40.0%
AAGAAGATACAGCAGAGACA+AGG + chr3_1:76342404-76342423 Msa0376300:CDS 40.0%
CATACTCTTCCTCTAGATCT+GGG - chr3_1:76342445-76342464 Msa0376290:intron 40.0%
TCATACTCTTCCTCTAGATC+TGG - chr3_1:76342446-76342465 Msa0376290:intron 40.0%
!! ATATACCGATTTACAACGCC+AGG + chr3_1:76342499-76342518 Msa0376300:three_prime_UTR 40.0%
!! TATACCGATTTACAACGCCA+GGG + chr3_1:76342500-76342519 Msa0376300:three_prime_UTR 40.0%
! TTTCTTTTCATATCAGCCCC+TGG - chr3_1:76342520-76342539 Msa0376290:intron 40.0%
TATTACTAAAAGGAGGGGGA+GGG + chr3_1:76342564-76342583 Msa0376300:three_prime_UTR 40.0%
!! GAAGCAATTTGTTTTCGGCA+GGG + chr3_1:76342615-76342634 Msa0376300:three_prime_UTR 40.0%
! TTGTTTTCGGCAGGGTTTTT+AGG + chr3_1:76342623-76342642 Msa0376300:three_prime_UTR 40.0%
! TGTTTTCGGCAGGGTTTTTA+GGG + chr3_1:76342624-76342643 Msa0376300:three_prime_UTR 40.0%
AGCAAAATATTCATCCCTGC+CGG + chr3_1:76342662-76342681 Msa0376300:three_prime_UTR 40.0%
CCAAATCATCTATTCCTGGT+TGG - chr3_1:76343013-76343032 Msa0376290:intron 40.0%
CCAACCAGGAATAGATGATT+TGG + chr3_1:76343010-76343029 Msa0376300:three_prime_UTR 40.0%
GAAGAAGAACTCGATCGATA+AGG + chr3_1:76340998-76341017 Msa0376300:five_prime_UTR 40.0%
AAGAACTCGATCGATAAGGA+TGG + chr3_1:76341002-76341021 Msa0376300:five_prime_UTR 40.0%
AGAACTCGATCGATAAGGAT+GGG + chr3_1:76341003-76341022 Msa0376300:five_prime_UTR 40.0%
TGTAGCTTATACAGCCAGTA+AGG - chr3_1:76341043-76341062 Msa0376290:intron 40.0%
! TACTGGCTGTATAAGCTACA+TGG + chr3_1:76341043-76341062 Msa0376300:CDS 40.0%
CTGTATAAGCTACATGGTCT+GGG + chr3_1:76341049-76341068 Msa0376300:CDS 40.0%
!! TGAACTGTCGTTTCTTTTGC+TGG + chr3_1:76341110-76341129 Msa0376300:intron 40.0%
GAGGAGCAGATAAAAGCAAA+AGG + chr3_1:76341221-76341240 Msa0376300:intron 40.0%
TGCGGGAACTATAGTTATTG+GGG + chr3_1:76341428-76341447 Msa0376300:CDS 40.0%
AAAGAATGGCGTCATCAACA+TGG + chr3_1:76341476-76341495 Msa0376300:CDS 40.0%
AAGAATGGCGTCATCAACAT+GGG + chr3_1:76341477-76341496 Msa0376300:CDS 40.0%
!!! GTTTTTTCTTAGCAGGGAAG+AGG - chr3_1:76341799-76341818 Msa0376290:intron 40.0%
! TGCAAAATATTTTGTGGGGG+TGG + chr3_1:76342055-76342074 Msa0376300:intron 40.0%
! GCAAAATATTTTGTGGGGGT+GGG + chr3_1:76342056-76342075 Msa0376300:intron 40.0%
! CAAAATATTTTGTGGGGGTG+GGG + chr3_1:76342057-76342076 Msa0376300:intron 40.0%
GACCAAGATATGAAATCCTC+AGG - chr3_1:76342160-76342179 Msa0376290:intron 40.0%
ATGCTACTATTCTCTGTTGC+AGG + chr3_1:76342364-76342383 Msa0376300:intron 40.0%
AAGAAGATACAGCAGAGACA+AGG + chr3_1:76342404-76342423 Msa0376300:CDS 40.0%
CATACTCTTCCTCTAGATCT+GGG - chr3_1:76342445-76342464 Msa0376290:intron 40.0%
TCATACTCTTCCTCTAGATC+TGG - chr3_1:76342446-76342465 Msa0376290:intron 40.0%
!! ATATACCGATTTACAACGCC+AGG + chr3_1:76342499-76342518 Msa0376300:three_prime_UTR 40.0%
!! TATACCGATTTACAACGCCA+GGG + chr3_1:76342500-76342519 Msa0376300:three_prime_UTR 40.0%
! TTTCTTTTCATATCAGCCCC+TGG - chr3_1:76342520-76342539 Msa0376290:intron 40.0%
TATTACTAAAAGGAGGGGGA+GGG + chr3_1:76342564-76342583 Msa0376300:three_prime_UTR 40.0%
!! GAAGCAATTTGTTTTCGGCA+GGG + chr3_1:76342615-76342634 Msa0376300:three_prime_UTR 40.0%
! TTGTTTTCGGCAGGGTTTTT+AGG + chr3_1:76342623-76342642 Msa0376300:three_prime_UTR 40.0%
! TGTTTTCGGCAGGGTTTTTA+GGG + chr3_1:76342624-76342643 Msa0376300:three_prime_UTR 40.0%
AGCAAAATATTCATCCCTGC+CGG + chr3_1:76342662-76342681 Msa0376300:three_prime_UTR 40.0%
CCAAATCATCTATTCCTGGT+TGG - chr3_1:76343013-76343032 Msa0376290:intron 40.0%
CCAACCAGGAATAGATGATT+TGG + chr3_1:76343010-76343029 Msa0376300:three_prime_UTR 40.0%
TCGATCGATAAGGATGGGAT+GGG + chr3_1:76341008-76341027 Msa0376300:exon 45.0%
ATGGGAAGCCTATACCTTAC+TGG + chr3_1:76341026-76341045 Msa0376300:CDS 45.0%
GCTGTATAAGCTACATGGTC+TGG + chr3_1:76341048-76341067 Msa0376300:CDS 45.0%
GCTGGATATATCTCAAGGGT+TGG + chr3_1:76341128-76341147 Msa0376300:intron 45.0%
TATTGTCCGCCTTTGCTTGT+TGG + chr3_1:76341271-76341290 Msa0376300:intron 45.0%
ATACTGCCAACAAGCAAAGG+CGG - chr3_1:76341280-76341299 Msa0376290:intron 45.0%
GCAATACTGCCAACAAGCAA+AGG - chr3_1:76341283-76341302 Msa0376290:intron 45.0%
GCGGGAACTATAGTTATTGG+GGG + chr3_1:76341429-76341448 Msa0376300:CDS 45.0%
GTCTATCAGTGATGTGTGTG+CGG + chr3_1:76341752-76341771 Msa0376300:intron 45.0%
ACAAACTAAACGCGCACTTG+CGG - chr3_1:76341896-76341915 Msa0376290:intron 45.0%
TGCAGGAAGCAAAAGAGCTT+TGG + chr3_1:76342381-76342400 Msa0376300:intron 45.0%
AGAGACAAGGAGTGAACAAG+TGG + chr3_1:76342417-76342436 Msa0376300:exon 45.0%
!! ATACCGATTTACAACGCCAG+GGG + chr3_1:76342501-76342520 Msa0376300:three_prime_UTR 45.0%
CTATTACTAAAAGGAGGGGG+AGG + chr3_1:76342563-76342582 Msa0376300:three_prime_UTR 45.0%
ATTACTAAAAGGAGGGGGAG+GGG + chr3_1:76342565-76342584 Msa0376300:three_prime_UTR 45.0%
!! GGAAGCAATTTGTTTTCGGC+AGG + chr3_1:76342614-76342633 Msa0376300:three_prime_UTR 45.0%
!! GTTTTCGGCAGGGTTTTTAG+GGG + chr3_1:76342625-76342644 Msa0376300:three_prime_UTR 45.0%
GCAAAATATTCATCCCTGCC+GGG + chr3_1:76342663-76342682 Msa0376300:three_prime_UTR 45.0%
CAAAATATTCATCCCTGCCG+GGG + chr3_1:76342664-76342683 Msa0376300:three_prime_UTR 45.0%
AATACCTTAGAGGAGAAGGG+AGG + chr3_1:76342954-76342973 Msa0376300:three_prime_UTR 45.0%
ATACCTTAGAGGAGAAGGGA+GGG + chr3_1:76342955-76342974 Msa0376300:three_prime_UTR 45.0%
GGAGACAAGCGTGTTAGAAA+CGG + chr3_1:76343167-76343186 Msa0376300:three_prime_UTR 45.0%
TCGATCGATAAGGATGGGAT+GGG + chr3_1:76341008-76341027 Msa0376300:exon 45.0%
ATGGGAAGCCTATACCTTAC+TGG + chr3_1:76341026-76341045 Msa0376300:CDS 45.0%
GCTGTATAAGCTACATGGTC+TGG + chr3_1:76341048-76341067 Msa0376300:CDS 45.0%
GCTGGATATATCTCAAGGGT+TGG + chr3_1:76341128-76341147 Msa0376300:intron 45.0%
TATTGTCCGCCTTTGCTTGT+TGG + chr3_1:76341271-76341290 Msa0376300:intron 45.0%
ATACTGCCAACAAGCAAAGG+CGG - chr3_1:76341280-76341299 Msa0376290:intron 45.0%
GCAATACTGCCAACAAGCAA+AGG - chr3_1:76341283-76341302 Msa0376290:intron 45.0%
GCGGGAACTATAGTTATTGG+GGG + chr3_1:76341429-76341448 Msa0376300:CDS 45.0%
GTCTATCAGTGATGTGTGTG+CGG + chr3_1:76341752-76341771 Msa0376300:intron 45.0%
ACAAACTAAACGCGCACTTG+CGG - chr3_1:76341896-76341915 Msa0376290:intron 45.0%
TGCAGGAAGCAAAAGAGCTT+TGG + chr3_1:76342381-76342400 Msa0376300:intron 45.0%
AGAGACAAGGAGTGAACAAG+TGG + chr3_1:76342417-76342436 Msa0376300:exon 45.0%
!! ATACCGATTTACAACGCCAG+GGG + chr3_1:76342501-76342520 Msa0376300:three_prime_UTR 45.0%
CTATTACTAAAAGGAGGGGG+AGG + chr3_1:76342563-76342582 Msa0376300:three_prime_UTR 45.0%
ATTACTAAAAGGAGGGGGAG+GGG + chr3_1:76342565-76342584 Msa0376300:three_prime_UTR 45.0%
!! GGAAGCAATTTGTTTTCGGC+AGG + chr3_1:76342614-76342633 Msa0376300:three_prime_UTR 45.0%
!! GTTTTCGGCAGGGTTTTTAG+GGG + chr3_1:76342625-76342644 Msa0376300:three_prime_UTR 45.0%
GCAAAATATTCATCCCTGCC+GGG + chr3_1:76342663-76342682 Msa0376300:three_prime_UTR 45.0%
CAAAATATTCATCCCTGCCG+GGG + chr3_1:76342664-76342683 Msa0376300:three_prime_UTR 45.0%
AATACCTTAGAGGAGAAGGG+AGG + chr3_1:76342954-76342973 Msa0376300:three_prime_UTR 45.0%
ATACCTTAGAGGAGAAGGGA+GGG + chr3_1:76342955-76342974 Msa0376300:three_prime_UTR 45.0%
!! ATAATATTTATTATATTGTA+CGG + chr3_1:76343109-76343128 Msa0376300:three_prime_UTR 5.0%
!! ATAATATTTATTATATTGTA+CGG + chr3_1:76343109-76343128 Msa0376300:three_prime_UTR 5.0%
CTCGATCGATAAGGATGGGA+TGG + chr3_1:76341007-76341026 Msa0376300:exon 50.0%
TAAGCTACATGGTCTGGGTC+AGG + chr3_1:76341054-76341073 Msa0376300:CDS 50.0%
GAGTCTTGACAGTCCCAAAG+TGG + chr3_1:76341171-76341190 Msa0376300:intron 50.0%
! CTGCGCTTGCAAAGTGCTTA+TGG + chr3_1:76341972-76341991 Msa0376300:intron 50.0%
!! TCTGTTCCCACTTTTCTCCC+CGG - chr3_1:76342684-76342703 Msa0376290:intron 50.0%
TACCTTAGAGGAGAAGGGAG+GGG + chr3_1:76342956-76342975 Msa0376300:three_prime_UTR 50.0%
!!! TCCATTTTAGCTCCCCAACC+AGG + chr3_1:76342996-76343015 Msa0376300:three_prime_UTR 50.0%
TCCTGGTTGGGGAGCTAAAA+TGG - chr3_1:76343000-76343019 Msa0376290:intron 50.0%
CTCGATCGATAAGGATGGGA+TGG + chr3_1:76341007-76341026 Msa0376300:exon 50.0%
TAAGCTACATGGTCTGGGTC+AGG + chr3_1:76341054-76341073 Msa0376300:CDS 50.0%
GAGTCTTGACAGTCCCAAAG+TGG + chr3_1:76341171-76341190 Msa0376300:intron 50.0%
! CTGCGCTTGCAAAGTGCTTA+TGG + chr3_1:76341972-76341991 Msa0376300:intron 50.0%
!! TCTGTTCCCACTTTTCTCCC+CGG - chr3_1:76342684-76342703 Msa0376290:intron 50.0%
TACCTTAGAGGAGAAGGGAG+GGG + chr3_1:76342956-76342975 Msa0376300:three_prime_UTR 50.0%
!!! TCCATTTTAGCTCCCCAACC+AGG + chr3_1:76342996-76343015 Msa0376300:three_prime_UTR 50.0%
TCCTGGTTGGGGAGCTAAAA+TGG - chr3_1:76343000-76343019 Msa0376290:intron 50.0%
CAACATGGGATGCGATGCCT+TGG + chr3_1:76341491-76341510 Msa0376300:CDS 55.0%
GGACTGGAGAGAAACAGCAC+TGG - chr3_1:76342298-76342317 Msa0376290:intron 55.0%
CAGCCCCTGGCGTTGTAAAT+CGG - chr3_1:76342507-76342526 Msa0376290:intron 55.0%
!! CGGCAGGGTTTTTAGGGGAA+TGG + chr3_1:76342630-76342649 Msa0376300:three_prime_UTR 55.0%
CAACATGGGATGCGATGCCT+TGG + chr3_1:76341491-76341510 Msa0376300:CDS 55.0%
GGACTGGAGAGAAACAGCAC+TGG - chr3_1:76342298-76342317 Msa0376290:intron 55.0%
CAGCCCCTGGCGTTGTAAAT+CGG - chr3_1:76342507-76342526 Msa0376290:intron 55.0%
!! CGGCAGGGTTTTTAGGGGAA+TGG + chr3_1:76342630-76342649 Msa0376300:three_prime_UTR 55.0%
CAAGTGGCGCCCAGATCTAG+AGG + chr3_1:76342433-76342452 Msa0376300:three_prime_UTR 60.0%
ATCCCTGCCGGGGAGAAAAG+TGG + chr3_1:76342674-76342693 Msa0376300:three_prime_UTR 60.0%
TCCCTGCCGGGGAGAAAAGT+GGG + chr3_1:76342675-76342694 Msa0376300:three_prime_UTR 60.0%
!! TCCCACTTTTCTCCCCGGCA+GGG - chr3_1:76342679-76342698 Msa0376290:intron 60.0%
!! TTCCCACTTTTCTCCCCGGC+AGG - chr3_1:76342680-76342699 Msa0376290:intron 60.0%
CTCCCCTCCCTTCTCCTCTA+AGG - chr3_1:76342961-76342980 Msa0376290:intron 60.0%
CAAGTGGCGCCCAGATCTAG+AGG + chr3_1:76342433-76342452 Msa0376300:three_prime_UTR 60.0%
ATCCCTGCCGGGGAGAAAAG+TGG + chr3_1:76342674-76342693 Msa0376300:three_prime_UTR 60.0%
TCCCTGCCGGGGAGAAAAGT+GGG + chr3_1:76342675-76342694 Msa0376300:three_prime_UTR 60.0%
!! TCCCACTTTTCTCCCCGGCA+GGG - chr3_1:76342679-76342698 Msa0376290:intron 60.0%
!! TTCCCACTTTTCTCCCCGGC+AGG - chr3_1:76342680-76342699 Msa0376290:intron 60.0%
CTCCCCTCCCTTCTCCTCTA+AGG - chr3_1:76342961-76342980 Msa0376290:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76340935 76343188 76340935 ID=Msa0376300;Name=Msa0376300
chr3_1 mRNA 76340935 76343188 76340935 ID=Msa0376300-mRNA-1;Parent=Msa0376300;Name=Msa0376300-mRNA-1;_AED=0.39;_eAED=0.39;_QI=91|1|1|1|1|1|3|757|80
chr3_1 exon 76340935 76341075 76340935 ID=Msa0376300-mRNA-1:exon:18098;Parent=Msa0376300-mRNA-1
chr3_1 exon 76341410 76341556 76341410 ID=Msa0376300-mRNA-1:exon:18099;Parent=Msa0376300-mRNA-1
chr3_1 exon 76342386 76343188 76342386 ID=Msa0376300-mRNA-1:exon:18100;Parent=Msa0376300-mRNA-1
chr3_1 five_prime_UTR 76340935 76341025 76340935 ID=Msa0376300-mRNA-1:five_prime_utr;Parent=Msa0376300-mRNA-1
chr3_1 CDS 76341026 76341075 76341026 ID=Msa0376300-mRNA-1:cds;Parent=Msa0376300-mRNA-1
chr3_1 CDS 76341410 76341556 76341410 ID=Msa0376300-mRNA-1:cds;Parent=Msa0376300-mRNA-1
chr3_1 CDS 76342386 76342431 76342386 ID=Msa0376300-mRNA-1:cds;Parent=Msa0376300-mRNA-1
chr3_1 three_prime_UTR 76342432 76343188 76342432 ID=Msa0376300-mRNA-1:three_prime_utr;Parent=Msa0376300-mRNA-1
Gene Sequence

>Msa0376300

ATGGGAAGCCTATACCTTACTGGCTGTATAAGCTACATGGTCTGGGTCAGGAATTTAAGTGCGAGATATGCGGGAACTATAGTTATTGGGGGCGTCGTGCTTTTGAACGACATTTTAAAGAATGGCGTCATCAACATGGGATGCGATGCCTTGGTATACCAAATACAAAGAACTTCAACGAAATTACGTCAATTGAGGAAGCAAAAGAGCTTTGGAAGAAGATACAGCAGAGACAAGGAGTGA

Protein sequence

>Msa0376300

MGSLYLTGCISYMVWVRNLSARYAGTIVIGGVVLLNDILKNGVINMGCDALVYQIQRTSTKLRQLRKQKSFGRRYSRDKE*