AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 77 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTTTAATGTAGATTTAA+TGG 0.172058 3_1:+76348879 Msa0376310:three_prime_UTR
TTACCAATTATTATTGTTAT+AGG 0.187069 3_1:+76348830 Msa0376310:three_prime_UTR
TAAATAGAAGTATTCATTAA+AGG 0.227847 3_1:+76349155 Msa0376310:three_prime_UTR
TCCTGGTTGGGGAGCTAAAA+TGG 0.228113 3_1:-76349007 Msa0376290:intron
TCCCATTAAATCTACATTAA+AGG 0.229384 3_1:-76348881 Msa0376290:intron
TCGTTGAAGTTCTTTGTATT+TGG 0.231113 3_1:-76347528 Msa0376290:intron
CTCCCCTCCCTTCTCCTCTA+AGG 0.239651 3_1:-76348968 Msa0376290:intron
ATTCTTCTTCTATTACTAAA+AGG 0.251581 3_1:+76348564 Msa0376310:three_prime_UTR
TATGCGGGAACTATAGTTAT+TGG 0.255362 3_1:+76347436 Msa0376310:CDS
TCATACTCTTCCTCTAGATC+TGG 0.301279 3_1:-76348453 Msa0376290:intron
TCTTCATAGGTGATACAAAA+AGG 0.311553 3_1:-76348601 Msa0376290:intron
AAACCTATAACAATAATAAT+TGG 0.316748 3_1:-76348833 Msa0376290:intron
CCAACCAGGAATAGATGATT+TGG 0.317358 3_1:+76349020 Msa0376310:three_prime_UTR
TTTAGTAATAGAAGAAGAAT+TGG 0.325226 3_1:-76348561 Msa0376290:intron
TCCTTTAATGTAGATTTAAT+GGG 0.326258 3_1:+76348880 Msa0376310:three_prime_UTR
ATGCGGGAACTATAGTTATT+GGG 0.353408 3_1:+76347437 Msa0376310:CDS
TTTGCATGTCAAGTTATGTT+TGG 0.355084 3_1:+76348916 Msa0376310:three_prime_UTR
AACAATAAACAATACCTTAG+AGG 0.359284 3_1:+76348954 Msa0376310:three_prime_UTR
ACAAATTGCTTCCTCTTCAT+AGG 0.360394 3_1:-76348614 Msa0376290:intron
AAATAGAAGTATTCATTAAA+GGG 0.361667 3_1:+76349156 Msa0376310:three_prime_UTR
CAAATCATCTATTCCTGGTT+GGG 0.364404 3_1:-76349019 Msa0376290:intron
CACCGCAATTCACAAAATAT+TGG 0.365865 3_1:-76348721 Msa0376290:intron
TAATCCAAATCATCTATTCC+TGG 0.379671 3_1:-76349024 Msa0376290:intron
ATGGGAAGCCTATACCTTAC+TGG 0.385559 3_1:+76347036 Msa0376310:CDS
GCTGTATAAGCTACATGGTC+TGG 0.393993 3_1:+76347058 Msa0376310:CDS
CAGCCCCTGGCGTTGTAAAT+CGG 0.404084 3_1:-76348514 Msa0376290:intron
TGCAGGAAGCAAAAGAGCTT+TGG 0.404374 3_1:+76348391 Msa0376310:intron
ATAATATTTATTATATTGTA+CGG 0.417893 3_1:+76349119 Msa0376310:three_prime_UTR
TTATACAGCCAGTAAGGTAT+AGG 0.426162 3_1:-76347044 Msa0376290:intron
CTGATATCCTCTAACAAAAC+AGG 0.433610 3_1:+76348774 Msa0376310:three_prime_UTR
CTACATTAAAGGACATTAGT+TGG 0.436257 3_1:-76348870 Msa0376290:intron
CTCGATCGATAAGGATGGGA+TGG 0.476872 3_1:+76347017 Msa0376310:exon
AGCAAAATATTCATCCCTGC+CGG 0.477027 3_1:+76348672 Msa0376310:three_prime_UTR
TTAGAAGATTTAGAGAGTTG+AGG 0.483679 3_1:+76349044 Msa0376310:three_prime_UTR
TAATATTTATTATATTGTAC+GGG 0.486647 3_1:+76349120 Msa0376310:three_prime_UTR
CAACGAAATTACGTCAATTG+AGG 0.486863 3_1:+76347545 Msa0376310:CDS
CTTCTTCTATTACTAAAAGG+AGG 0.491593 3_1:+76348567 Msa0376310:three_prime_UTR
GCAAAATATTCATCCCTGCC+GGG 0.492648 3_1:+76348673 Msa0376310:three_prime_UTR
GAGACAAGCGTGTTAGAAAC+GGG 0.493644 3_1:+76349178 Msa0376310:three_prime_UTR
CTGTATAAGCTACATGGTCT+GGG 0.495612 3_1:+76347059 Msa0376310:CDS
AATTTAAGTGCGAGATATGC+GGG 0.502127 3_1:+76347421 Msa0376310:CDS
AAACAATACCTTAGAGGAGA+AGG 0.503570 3_1:+76348960 Msa0376310:three_prime_UTR
TAAGCTACATGGTCTGGGTC+AGG 0.506287 3_1:+76347064 Msa0376310:CDS
CATACTCTTCCTCTAGATCT+GGG 0.507949 3_1:-76348452 Msa0376290:intron
GAAGAAGAACTCGATCGATA+AGG 0.509083 3_1:+76347008 Msa0376310:five_prime_UTR
CAACATGGGATGCGATGCCT+TGG 0.512114 3_1:+76347501 Msa0376310:CDS
CCAAATCATCTATTCCTGGT+TGG 0.515930 3_1:-76349020 Msa0376290:intron
GGAGACAAGCGTGTTAGAAA+CGG 0.517772 3_1:+76349177 Msa0376310:three_prime_UTR
TTCTTCTATTACTAAAAGGA+GGG 0.520180 3_1:+76348568 Msa0376310:three_prime_UTR
TGTAGCTTATACAGCCAGTA+AGG 0.523342 3_1:-76347050 Msa0376290:intron
ATATACCGATTTACAACGCC+AGG 0.529015 3_1:+76348509 Msa0376310:three_prime_UTR
ATCCCTGCCGGGGAGAAAAG+TGG 0.535612 3_1:+76348684 Msa0376310:three_prime_UTR
AAATCATCTATTCCTGGTTG+GGG 0.542939 3_1:-76349018 Msa0376290:intron
GAAGAGTATGAAGACAAAGA+AGG 0.547972 3_1:+76348465 Msa0376310:three_prime_UTR
AAGAACTCGATCGATAAGGA+TGG 0.550977 3_1:+76347012 Msa0376310:five_prime_UTR
AAAGAATGGCGTCATCAACA+TGG 0.552884 3_1:+76347486 Msa0376310:CDS
TACCTTAGAGGAGAAGGGAG+GGG 0.570577 3_1:+76348966 Msa0376310:three_prime_UTR
TGCGGGAACTATAGTTATTG+GGG 0.570663 3_1:+76347438 Msa0376310:CDS
TCCCTGCCGGGGAGAAAAGT+GGG 0.573395 3_1:+76348685 Msa0376310:three_prime_UTR
CTTCTATTACTAAAAGGAGG+GGG 0.578888 3_1:+76348570 Msa0376310:three_prime_UTR
AGAACTCGATCGATAAGGAT+GGG 0.582074 3_1:+76347013 Msa0376310:five_prime_UTR
ATACCTTAGAGGAGAAGGGA+GGG 0.584826 3_1:+76348965 Msa0376310:three_prime_UTR
GAATTTAAGTGCGAGATATG+CGG 0.584834 3_1:+76347420 Msa0376310:CDS
CAAGTGGCGCCCAGATCTAG+AGG 0.587275 3_1:+76348443 Msa0376310:three_prime_UTR
TCTTCTATTACTAAAAGGAG+GGG 0.587856 3_1:+76348569 Msa0376310:three_prime_UTR
AACAATACCTTAGAGGAGAA+GGG 0.588049 3_1:+76348961 Msa0376310:three_prime_UTR
TCGATCGATAAGGATGGGAT+GGG 0.599470 3_1:+76347018 Msa0376310:exon
TACTGGCTGTATAAGCTACA+TGG 0.603636 3_1:+76347053 Msa0376310:CDS
TCTTTGTATTTGGTATACCA+AGG 0.611780 3_1:-76347518 Msa0376290:intron
AGAGACAAGGAGTGAACAAG+TGG 0.612327 3_1:+76348427 Msa0376310:exon
CAAAATATTCATCCCTGCCG+GGG 0.622348 3_1:+76348674 Msa0376310:three_prime_UTR
AAGAATGGCGTCATCAACAT+GGG 0.625608 3_1:+76347487 Msa0376310:CDS
AAGAAGATACAGCAGAGACA+AGG 0.630262 3_1:+76348414 Msa0376310:CDS
AATACCTTAGAGGAGAAGGG+AGG 0.676129 3_1:+76348964 Msa0376310:three_prime_UTR
TATACCGATTTACAACGCCA+GGG 0.704758 3_1:+76348510 Msa0376310:three_prime_UTR
GCGGGAACTATAGTTATTGG+GGG 0.717346 3_1:+76347439 Msa0376310:CDS
ATACCGATTTACAACGCCAG+GGG 0.730189 3_1:+76348511 Msa0376310:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTTATTATATTGTAC+GGG + chr3_1:76349120-76349139 Msa0376310:three_prime_UTR 10.0%
!! TAATATTTATTATATTGTAC+GGG + chr3_1:76349120-76349139 Msa0376310:three_prime_UTR 10.0%
!! AATAATATAATATGCATTTC+AGG + chr3_1:76347398-76347417 Msa0376310:intron 15.0%
!!! ATATTTTGCAAAATATTTTG+TGG + chr3_1:76348059-76348078 Msa0376310:intron 15.0%
!!! TATTTTGCAAAATATTTTGT+GGG + chr3_1:76348060-76348079 Msa0376310:intron 15.0%
!!! TTTTTTATTCTAATTTCATG+AGG - chr3_1:76348275-76348294 Msa0376290:intron 15.0%
!!! GACAAAAAAACTATTTTTAT+GGG + chr3_1:76348344-76348363 Msa0376310:intron 15.0%
!! TTACCAATTATTATTGTTAT+AGG + chr3_1:76348830-76348849 Msa0376310:three_prime_UTR 15.0%
!! AAACCTATAACAATAATAAT+TGG - chr3_1:76348836-76348855 Msa0376290:intron 15.0%
!!! ATTTTAATGAACATTTCTAT+TGG + chr3_1:76349072-76349091 Msa0376310:three_prime_UTR 15.0%
!!! TTTTAATGAACATTTCTATT+GGG + chr3_1:76349073-76349092 Msa0376310:three_prime_UTR 15.0%
!!! TAAATAGAAGTATTCATTAA+AGG + chr3_1:76349155-76349174 Msa0376310:three_prime_UTR 15.0%
!!! AAATAGAAGTATTCATTAAA+GGG + chr3_1:76349156-76349175 Msa0376310:three_prime_UTR 15.0%
!! AATAATATAATATGCATTTC+AGG + chr3_1:76347398-76347417 Msa0376310:intron 15.0%
!!! ATATTTTGCAAAATATTTTG+TGG + chr3_1:76348059-76348078 Msa0376310:intron 15.0%
!!! TATTTTGCAAAATATTTTGT+GGG + chr3_1:76348060-76348079 Msa0376310:intron 15.0%
!!! TTTTTTATTCTAATTTCATG+AGG - chr3_1:76348275-76348294 Msa0376290:intron 15.0%
!!! GACAAAAAAACTATTTTTAT+GGG + chr3_1:76348344-76348363 Msa0376310:intron 15.0%
!! TTACCAATTATTATTGTTAT+AGG + chr3_1:76348830-76348849 Msa0376310:three_prime_UTR 15.0%
!! AAACCTATAACAATAATAAT+TGG - chr3_1:76348836-76348855 Msa0376290:intron 15.0%
!!! ATTTTAATGAACATTTCTAT+TGG + chr3_1:76349072-76349091 Msa0376310:three_prime_UTR 15.0%
!!! TTTTAATGAACATTTCTATT+GGG + chr3_1:76349073-76349092 Msa0376310:three_prime_UTR 15.0%
!!! TAAATAGAAGTATTCATTAA+AGG + chr3_1:76349155-76349174 Msa0376310:three_prime_UTR 15.0%
!!! AAATAGAAGTATTCATTAAA+GGG + chr3_1:76349156-76349175 Msa0376310:three_prime_UTR 15.0%
!! AAAATTTATCTCTTTACTAG+AGG + chr3_1:76347212-76347231 Msa0376310:intron 20.0%
!!! ATTGACTTAATTAGAAAGTT+AGG + chr3_1:76347326-76347345 Msa0376310:intron 20.0%
!! TTGACTTAATTAGAAAGTTA+GGG + chr3_1:76347327-76347346 Msa0376310:intron 20.0%
!!! GTTTATTTTATGATTCCTTA+TGG + chr3_1:76347354-76347373 Msa0376310:intron 20.0%
!!! AAATTTTGAAACTCAATTTG+CGG + chr3_1:76348005-76348024 Msa0376310:intron 20.0%
!!! ATTTTGCAAAATATTTTGTG+GGG + chr3_1:76348061-76348080 Msa0376310:intron 20.0%
!! TAAATTAGTAGAAAGAGAAT+AGG - chr3_1:76348145-76348164 Msa0376290:intron 20.0%
!!! GGACAAAAAAACTATTTTTA+TGG + chr3_1:76348343-76348362 Msa0376310:intron 20.0%
!! TTTAGTAATAGAAGAAGAAT+TGG - chr3_1:76348564-76348583 Msa0376290:intron 20.0%
!! ATTCTTCTTCTATTACTAAA+AGG + chr3_1:76348564-76348583 Msa0376310:three_prime_UTR 20.0%
!! TCCTTTAATGTAGATTTAAT+GGG + chr3_1:76348880-76348899 Msa0376310:three_prime_UTR 20.0%
!! AAAATTTATCTCTTTACTAG+AGG + chr3_1:76347212-76347231 Msa0376310:intron 20.0%
!!! ATTGACTTAATTAGAAAGTT+AGG + chr3_1:76347326-76347345 Msa0376310:intron 20.0%
!! TTGACTTAATTAGAAAGTTA+GGG + chr3_1:76347327-76347346 Msa0376310:intron 20.0%
!!! GTTTATTTTATGATTCCTTA+TGG + chr3_1:76347354-76347373 Msa0376310:intron 20.0%
!!! AAATTTTGAAACTCAATTTG+CGG + chr3_1:76348005-76348024 Msa0376310:intron 20.0%
!!! ATTTTGCAAAATATTTTGTG+GGG + chr3_1:76348061-76348080 Msa0376310:intron 20.0%
!! TAAATTAGTAGAAAGAGAAT+AGG - chr3_1:76348145-76348164 Msa0376290:intron 20.0%
!!! GGACAAAAAAACTATTTTTA+TGG + chr3_1:76348343-76348362 Msa0376310:intron 20.0%
!! TTTAGTAATAGAAGAAGAAT+TGG - chr3_1:76348564-76348583 Msa0376290:intron 20.0%
!! ATTCTTCTTCTATTACTAAA+AGG + chr3_1:76348564-76348583 Msa0376310:three_prime_UTR 20.0%
!! TCCTTTAATGTAGATTTAAT+GGG + chr3_1:76348880-76348899 Msa0376310:three_prime_UTR 20.0%
! TGACTTAATTAGAAAGTTAG+GGG + chr3_1:76347328-76347347 Msa0376310:intron 25.0%
!!! TTGAACGACATTTTAAAGAA+TGG + chr3_1:76347472-76347491 Msa0376310:CDS 25.0%
! TGATGTCAAATTATTTCAGT+TGG - chr3_1:76347612-76347631 Msa0376290:intron 25.0%
! TGGATGCTATATTTGATTAA+CGG - chr3_1:76347635-76347654 Msa0376290:intron 25.0%
! TAATCAAATATAGCATCCAT+TGG + chr3_1:76347636-76347655 Msa0376310:intron 25.0%
! AATCAAATATAGCATCCATT+GGG + chr3_1:76347637-76347656 Msa0376310:intron 25.0%
!!! TACAAGAAAGTTTTAATGCT+AGG - chr3_1:76347677-76347696 Msa0376290:intron 25.0%
!!! TAACTAGTTTTTTCTTAGCA+GGG - chr3_1:76347815-76347834 Msa0376290:intron 25.0%
!!! ATAACTAGTTTTTTCTTAGC+AGG - chr3_1:76347816-76347835 Msa0376290:intron 25.0%
! TAGTTATCTACTTGTAATCA+CGG + chr3_1:76347829-76347848 Msa0376310:intron 25.0%
! CCATAGTAAAGTATATGATA+GGG - chr3_1:76347883-76347902 Msa0376290:intron 25.0%
!! TTTTGCAAAATATTTTGTGG+GGG + chr3_1:76348062-76348081 Msa0376310:intron 25.0%
! TTTCTACTAATTTATTCCTG+AGG + chr3_1:76348151-76348170 Msa0376310:intron 25.0%
! TTGTCCAAAACTATTTGTAA+AGG - chr3_1:76348329-76348348 Msa0376290:intron 25.0%
! TTCTTCTATTACTAAAAGGA+GGG + chr3_1:76348568-76348587 Msa0376310:three_prime_UTR 25.0%
! GTCCTTTAATGTAGATTTAA+TGG + chr3_1:76348879-76348898 Msa0376310:three_prime_UTR 25.0%
! TCCCATTAAATCTACATTAA+AGG - chr3_1:76348884-76348903 Msa0376290:intron 25.0%
! AACAATAAACAATACCTTAG+AGG + chr3_1:76348954-76348973 Msa0376310:three_prime_UTR 25.0%
! TGACTTAATTAGAAAGTTAG+GGG + chr3_1:76347328-76347347 Msa0376310:intron 25.0%
!!! TTGAACGACATTTTAAAGAA+TGG + chr3_1:76347472-76347491 Msa0376310:CDS 25.0%
! TGATGTCAAATTATTTCAGT+TGG - chr3_1:76347612-76347631 Msa0376290:intron 25.0%
! TGGATGCTATATTTGATTAA+CGG - chr3_1:76347635-76347654 Msa0376290:intron 25.0%
! TAATCAAATATAGCATCCAT+TGG + chr3_1:76347636-76347655 Msa0376310:intron 25.0%
! AATCAAATATAGCATCCATT+GGG + chr3_1:76347637-76347656 Msa0376310:intron 25.0%
!!! TACAAGAAAGTTTTAATGCT+AGG - chr3_1:76347677-76347696 Msa0376290:intron 25.0%
!!! TAACTAGTTTTTTCTTAGCA+GGG - chr3_1:76347815-76347834 Msa0376290:intron 25.0%
!!! ATAACTAGTTTTTTCTTAGC+AGG - chr3_1:76347816-76347835 Msa0376290:intron 25.0%
! TAGTTATCTACTTGTAATCA+CGG + chr3_1:76347829-76347848 Msa0376310:intron 25.0%
! CCATAGTAAAGTATATGATA+GGG - chr3_1:76347883-76347902 Msa0376290:intron 25.0%
!! TTTTGCAAAATATTTTGTGG+GGG + chr3_1:76348062-76348081 Msa0376310:intron 25.0%
! TTTCTACTAATTTATTCCTG+AGG + chr3_1:76348151-76348170 Msa0376310:intron 25.0%
! TTGTCCAAAACTATTTGTAA+AGG - chr3_1:76348329-76348348 Msa0376290:intron 25.0%
! TTCTTCTATTACTAAAAGGA+GGG + chr3_1:76348568-76348587 Msa0376310:three_prime_UTR 25.0%
! GTCCTTTAATGTAGATTTAA+TGG + chr3_1:76348879-76348898 Msa0376310:three_prime_UTR 25.0%
! TCCCATTAAATCTACATTAA+AGG - chr3_1:76348884-76348903 Msa0376290:intron 25.0%
! AACAATAAACAATACCTTAG+AGG + chr3_1:76348954-76348973 Msa0376310:three_prime_UTR 25.0%
! TTTTGCTGGATATATCTCAA+GGG + chr3_1:76347134-76347153 Msa0376310:intron 30.0%
! ATTTTGTAAGTCACCACTTT+GGG - chr3_1:76347197-76347216 Msa0376290:intron 30.0%
! AATTTTGTAAGTCACCACTT+TGG - chr3_1:76347198-76347217 Msa0376290:intron 30.0%
TCAAAATAATGAGAGCCATA+AGG - chr3_1:76347372-76347391 Msa0376290:intron 30.0%
TCTTTGTATTTGGTATACCA+AGG - chr3_1:76347521-76347540 Msa0376290:intron 30.0%
TCGTTGAAGTTCTTTGTATT+TGG - chr3_1:76347531-76347550 Msa0376290:intron 30.0%
ATCAAATATAGCATCCATTG+GGG + chr3_1:76347638-76347657 Msa0376310:intron 30.0%
ATGAAGTATATTTGACTGCA+TGG + chr3_1:76347734-76347753 Msa0376310:intron 30.0%
CCCTATCATATACTTTACTA+TGG + chr3_1:76347880-76347899 Msa0376310:intron 30.0%
GCCATAGTAAAGTATATGAT+AGG - chr3_1:76347884-76347903 Msa0376290:intron 30.0%
! ACTCTGAATATCTTTTCTGT+TGG + chr3_1:76348034-76348053 Msa0376310:intron 30.0%
CAAAACTATTTGTAAAGGAC+TGG - chr3_1:76348324-76348343 Msa0376290:intron 30.0%
! CAGTCCTTTACAAATAGTTT+TGG + chr3_1:76348322-76348341 Msa0376310:intron 30.0%
ACAGAGAATAGTAGCATTTA+AGG - chr3_1:76348371-76348390 Msa0376290:intron 30.0%
CTTCTTCTATTACTAAAAGG+AGG + chr3_1:76348567-76348586 Msa0376310:three_prime_UTR 30.0%
TCTTCTATTACTAAAAGGAG+GGG + chr3_1:76348569-76348588 Msa0376310:three_prime_UTR 30.0%
TCTTCATAGGTGATACAAAA+AGG - chr3_1:76348604-76348623 Msa0376290:intron 30.0%
! TTTTTGTATCACCTATGAAG+AGG + chr3_1:76348603-76348622 Msa0376310:three_prime_UTR 30.0%
!! AAGAGGAAGCAATTTGTTTT+CGG + chr3_1:76348620-76348639 Msa0376310:three_prime_UTR 30.0%
! AGCCAATATTTTGTGAATTG+CGG + chr3_1:76348719-76348738 Msa0376310:three_prime_UTR 30.0%
CTACATTAAAGGACATTAGT+TGG - chr3_1:76348873-76348892 Msa0376290:intron 30.0%
TTTGCATGTCAAGTTATGTT+TGG + chr3_1:76348916-76348935 Msa0376310:three_prime_UTR 30.0%
TAATCCAAATCATCTATTCC+TGG - chr3_1:76349027-76349046 Msa0376290:intron 30.0%
TTAGAAGATTTAGAGAGTTG+AGG + chr3_1:76349044-76349063 Msa0376310:three_prime_UTR 30.0%
! TTTTGCTGGATATATCTCAA+GGG + chr3_1:76347134-76347153 Msa0376310:intron 30.0%
! ATTTTGTAAGTCACCACTTT+GGG - chr3_1:76347197-76347216 Msa0376290:intron 30.0%
! AATTTTGTAAGTCACCACTT+TGG - chr3_1:76347198-76347217 Msa0376290:intron 30.0%
TCAAAATAATGAGAGCCATA+AGG - chr3_1:76347372-76347391 Msa0376290:intron 30.0%
TCTTTGTATTTGGTATACCA+AGG - chr3_1:76347521-76347540 Msa0376290:intron 30.0%
TCGTTGAAGTTCTTTGTATT+TGG - chr3_1:76347531-76347550 Msa0376290:intron 30.0%
ATCAAATATAGCATCCATTG+GGG + chr3_1:76347638-76347657 Msa0376310:intron 30.0%
ATGAAGTATATTTGACTGCA+TGG + chr3_1:76347734-76347753 Msa0376310:intron 30.0%
CCCTATCATATACTTTACTA+TGG + chr3_1:76347880-76347899 Msa0376310:intron 30.0%
GCCATAGTAAAGTATATGAT+AGG - chr3_1:76347884-76347903 Msa0376290:intron 30.0%
! ACTCTGAATATCTTTTCTGT+TGG + chr3_1:76348034-76348053 Msa0376310:intron 30.0%
CAAAACTATTTGTAAAGGAC+TGG - chr3_1:76348324-76348343 Msa0376290:intron 30.0%
! CAGTCCTTTACAAATAGTTT+TGG + chr3_1:76348322-76348341 Msa0376310:intron 30.0%
ACAGAGAATAGTAGCATTTA+AGG - chr3_1:76348371-76348390 Msa0376290:intron 30.0%
CTTCTTCTATTACTAAAAGG+AGG + chr3_1:76348567-76348586 Msa0376310:three_prime_UTR 30.0%
TCTTCTATTACTAAAAGGAG+GGG + chr3_1:76348569-76348588 Msa0376310:three_prime_UTR 30.0%
TCTTCATAGGTGATACAAAA+AGG - chr3_1:76348604-76348623 Msa0376290:intron 30.0%
! TTTTTGTATCACCTATGAAG+AGG + chr3_1:76348603-76348622 Msa0376310:three_prime_UTR 30.0%
!! AAGAGGAAGCAATTTGTTTT+CGG + chr3_1:76348620-76348639 Msa0376310:three_prime_UTR 30.0%
! AGCCAATATTTTGTGAATTG+CGG + chr3_1:76348719-76348738 Msa0376310:three_prime_UTR 30.0%
CTACATTAAAGGACATTAGT+TGG - chr3_1:76348873-76348892 Msa0376290:intron 30.0%
TTTGCATGTCAAGTTATGTT+TGG + chr3_1:76348916-76348935 Msa0376310:three_prime_UTR 30.0%
TAATCCAAATCATCTATTCC+TGG - chr3_1:76349027-76349046 Msa0376290:intron 30.0%
TTAGAAGATTTAGAGAGTTG+AGG + chr3_1:76349044-76349063 Msa0376310:three_prime_UTR 30.0%
TTATACAGCCAGTAAGGTAT+AGG - chr3_1:76347047-76347066 Msa0376290:intron 35.0%
! CTTTTGCTGGATATATCTCA+AGG + chr3_1:76347133-76347152 Msa0376310:intron 35.0%
GAATTTAAGTGCGAGATATG+CGG + chr3_1:76347420-76347439 Msa0376310:CDS 35.0%
AATTTAAGTGCGAGATATGC+GGG + chr3_1:76347421-76347440 Msa0376310:CDS 35.0%
TATGCGGGAACTATAGTTAT+TGG + chr3_1:76347436-76347455 Msa0376310:CDS 35.0%
ATGCGGGAACTATAGTTATT+GGG + chr3_1:76347437-76347456 Msa0376310:CDS 35.0%
CAACGAAATTACGTCAATTG+AGG + chr3_1:76347545-76347564 Msa0376310:CDS 35.0%
GTGATAAAGTTATACCCCAA+TGG - chr3_1:76347655-76347674 Msa0376290:intron 35.0%
TATATTTGACTGCATGGTCT+TGG + chr3_1:76347740-76347759 Msa0376310:intron 35.0%
ATATGTCGTACGACTGTTAA+TGG + chr3_1:76348111-76348130 Msa0376310:intron 35.0%
TTCCTGAGGATTTCATATCT+TGG + chr3_1:76348165-76348184 Msa0376310:intron 35.0%
GCGAATAGATATTGTCACTA+GGG - chr3_1:76348200-76348219 Msa0376290:intron 35.0%
AGCGAATAGATATTGTCACT+AGG - chr3_1:76348201-76348220 Msa0376290:intron 35.0%
TAGTGACAATATCTATTCGC+TGG + chr3_1:76348200-76348219 Msa0376310:intron 35.0%
! GAAGAGTATGAAGACAAAGA+AGG + chr3_1:76348465-76348484 Msa0376310:three_prime_UTR 35.0%
CTTCTATTACTAAAAGGAGG+GGG + chr3_1:76348570-76348589 Msa0376310:three_prime_UTR 35.0%
ACAAATTGCTTCCTCTTCAT+AGG - chr3_1:76348617-76348636 Msa0376290:intron 35.0%
CACCGCAATTCACAAAATAT+TGG - chr3_1:76348724-76348743 Msa0376290:intron 35.0%
CTGATATCCTCTAACAAAAC+AGG + chr3_1:76348774-76348793 Msa0376310:three_prime_UTR 35.0%
!! TTCTTCTCCTGTTTTGTTAG+AGG - chr3_1:76348784-76348803 Msa0376290:intron 35.0%
AAACAATACCTTAGAGGAGA+AGG + chr3_1:76348960-76348979 Msa0376310:three_prime_UTR 35.0%
AACAATACCTTAGAGGAGAA+GGG + chr3_1:76348961-76348980 Msa0376310:three_prime_UTR 35.0%
AAATCATCTATTCCTGGTTG+GGG - chr3_1:76349021-76349040 Msa0376290:intron 35.0%
CAAATCATCTATTCCTGGTT+GGG - chr3_1:76349022-76349041 Msa0376290:intron 35.0%
TTATACAGCCAGTAAGGTAT+AGG - chr3_1:76347047-76347066 Msa0376290:intron 35.0%
! CTTTTGCTGGATATATCTCA+AGG + chr3_1:76347133-76347152 Msa0376310:intron 35.0%
GAATTTAAGTGCGAGATATG+CGG + chr3_1:76347420-76347439 Msa0376310:CDS 35.0%
AATTTAAGTGCGAGATATGC+GGG + chr3_1:76347421-76347440 Msa0376310:CDS 35.0%
TATGCGGGAACTATAGTTAT+TGG + chr3_1:76347436-76347455 Msa0376310:CDS 35.0%
ATGCGGGAACTATAGTTATT+GGG + chr3_1:76347437-76347456 Msa0376310:CDS 35.0%
CAACGAAATTACGTCAATTG+AGG + chr3_1:76347545-76347564 Msa0376310:CDS 35.0%
GTGATAAAGTTATACCCCAA+TGG - chr3_1:76347655-76347674 Msa0376290:intron 35.0%
TATATTTGACTGCATGGTCT+TGG + chr3_1:76347740-76347759 Msa0376310:intron 35.0%
ATATGTCGTACGACTGTTAA+TGG + chr3_1:76348111-76348130 Msa0376310:intron 35.0%
TTCCTGAGGATTTCATATCT+TGG + chr3_1:76348165-76348184 Msa0376310:intron 35.0%
GCGAATAGATATTGTCACTA+GGG - chr3_1:76348200-76348219 Msa0376290:intron 35.0%
AGCGAATAGATATTGTCACT+AGG - chr3_1:76348201-76348220 Msa0376290:intron 35.0%
TAGTGACAATATCTATTCGC+TGG + chr3_1:76348200-76348219 Msa0376310:intron 35.0%
! GAAGAGTATGAAGACAAAGA+AGG + chr3_1:76348465-76348484 Msa0376310:three_prime_UTR 35.0%
CTTCTATTACTAAAAGGAGG+GGG + chr3_1:76348570-76348589 Msa0376310:three_prime_UTR 35.0%
ACAAATTGCTTCCTCTTCAT+AGG - chr3_1:76348617-76348636 Msa0376290:intron 35.0%
CACCGCAATTCACAAAATAT+TGG - chr3_1:76348724-76348743 Msa0376290:intron 35.0%
CTGATATCCTCTAACAAAAC+AGG + chr3_1:76348774-76348793 Msa0376310:three_prime_UTR 35.0%
!! TTCTTCTCCTGTTTTGTTAG+AGG - chr3_1:76348784-76348803 Msa0376290:intron 35.0%
AAACAATACCTTAGAGGAGA+AGG + chr3_1:76348960-76348979 Msa0376310:three_prime_UTR 35.0%
AACAATACCTTAGAGGAGAA+GGG + chr3_1:76348961-76348980 Msa0376310:three_prime_UTR 35.0%
AAATCATCTATTCCTGGTTG+GGG - chr3_1:76349021-76349040 Msa0376290:intron 35.0%
CAAATCATCTATTCCTGGTT+GGG - chr3_1:76349022-76349041 Msa0376290:intron 35.0%
GAAGAAGAACTCGATCGATA+AGG + chr3_1:76347008-76347027 Msa0376310:five_prime_UTR 40.0%
AAGAACTCGATCGATAAGGA+TGG + chr3_1:76347012-76347031 Msa0376310:five_prime_UTR 40.0%
AGAACTCGATCGATAAGGAT+GGG + chr3_1:76347013-76347032 Msa0376310:five_prime_UTR 40.0%
TGTAGCTTATACAGCCAGTA+AGG - chr3_1:76347053-76347072 Msa0376290:intron 40.0%
! TACTGGCTGTATAAGCTACA+TGG + chr3_1:76347053-76347072 Msa0376310:CDS 40.0%
CTGTATAAGCTACATGGTCT+GGG + chr3_1:76347059-76347078 Msa0376310:CDS 40.0%
!! TGAACTGTCGTTTCTTTTGC+TGG + chr3_1:76347120-76347139 Msa0376310:intron 40.0%
GAGGAGCAGATAAAAGCAAA+AGG + chr3_1:76347231-76347250 Msa0376310:intron 40.0%
TGCGGGAACTATAGTTATTG+GGG + chr3_1:76347438-76347457 Msa0376310:CDS 40.0%
AAAGAATGGCGTCATCAACA+TGG + chr3_1:76347486-76347505 Msa0376310:CDS 40.0%
AAGAATGGCGTCATCAACAT+GGG + chr3_1:76347487-76347506 Msa0376310:CDS 40.0%
!!! GTTTTTTCTTAGCAGGGAAG+AGG - chr3_1:76347809-76347828 Msa0376290:intron 40.0%
! TGCAAAATATTTTGTGGGGG+TGG + chr3_1:76348065-76348084 Msa0376310:intron 40.0%
! GCAAAATATTTTGTGGGGGT+GGG + chr3_1:76348066-76348085 Msa0376310:intron 40.0%
! CAAAATATTTTGTGGGGGTG+GGG + chr3_1:76348067-76348086 Msa0376310:intron 40.0%
GACCAAGATATGAAATCCTC+AGG - chr3_1:76348170-76348189 Msa0376290:intron 40.0%
ATGCTACTATTCTCTGTTGC+AGG + chr3_1:76348374-76348393 Msa0376310:intron 40.0%
AAGAAGATACAGCAGAGACA+AGG + chr3_1:76348414-76348433 Msa0376310:CDS 40.0%
CATACTCTTCCTCTAGATCT+GGG - chr3_1:76348455-76348474 Msa0376290:intron 40.0%
TCATACTCTTCCTCTAGATC+TGG - chr3_1:76348456-76348475 Msa0376290:intron 40.0%
!! ATATACCGATTTACAACGCC+AGG + chr3_1:76348509-76348528 Msa0376310:three_prime_UTR 40.0%
!! TATACCGATTTACAACGCCA+GGG + chr3_1:76348510-76348529 Msa0376310:three_prime_UTR 40.0%
! TTTCTTTTCATATCAGCCCC+TGG - chr3_1:76348530-76348549 Msa0376290:intron 40.0%
TATTACTAAAAGGAGGGGGA+GGG + chr3_1:76348574-76348593 Msa0376310:three_prime_UTR 40.0%
!! GAAGCAATTTGTTTTCGGCA+GGG + chr3_1:76348625-76348644 Msa0376310:three_prime_UTR 40.0%
! TTGTTTTCGGCAGGGTTTTT+AGG + chr3_1:76348633-76348652 Msa0376310:three_prime_UTR 40.0%
! TGTTTTCGGCAGGGTTTTTA+GGG + chr3_1:76348634-76348653 Msa0376310:three_prime_UTR 40.0%
AGCAAAATATTCATCCCTGC+CGG + chr3_1:76348672-76348691 Msa0376310:three_prime_UTR 40.0%
CCAAATCATCTATTCCTGGT+TGG - chr3_1:76349023-76349042 Msa0376290:intron 40.0%
CCAACCAGGAATAGATGATT+TGG + chr3_1:76349020-76349039 Msa0376310:three_prime_UTR 40.0%
GAAGAAGAACTCGATCGATA+AGG + chr3_1:76347008-76347027 Msa0376310:five_prime_UTR 40.0%
AAGAACTCGATCGATAAGGA+TGG + chr3_1:76347012-76347031 Msa0376310:five_prime_UTR 40.0%
AGAACTCGATCGATAAGGAT+GGG + chr3_1:76347013-76347032 Msa0376310:five_prime_UTR 40.0%
TGTAGCTTATACAGCCAGTA+AGG - chr3_1:76347053-76347072 Msa0376290:intron 40.0%
! TACTGGCTGTATAAGCTACA+TGG + chr3_1:76347053-76347072 Msa0376310:CDS 40.0%
CTGTATAAGCTACATGGTCT+GGG + chr3_1:76347059-76347078 Msa0376310:CDS 40.0%
!! TGAACTGTCGTTTCTTTTGC+TGG + chr3_1:76347120-76347139 Msa0376310:intron 40.0%
GAGGAGCAGATAAAAGCAAA+AGG + chr3_1:76347231-76347250 Msa0376310:intron 40.0%
TGCGGGAACTATAGTTATTG+GGG + chr3_1:76347438-76347457 Msa0376310:CDS 40.0%
AAAGAATGGCGTCATCAACA+TGG + chr3_1:76347486-76347505 Msa0376310:CDS 40.0%
AAGAATGGCGTCATCAACAT+GGG + chr3_1:76347487-76347506 Msa0376310:CDS 40.0%
!!! GTTTTTTCTTAGCAGGGAAG+AGG - chr3_1:76347809-76347828 Msa0376290:intron 40.0%
! TGCAAAATATTTTGTGGGGG+TGG + chr3_1:76348065-76348084 Msa0376310:intron 40.0%
! GCAAAATATTTTGTGGGGGT+GGG + chr3_1:76348066-76348085 Msa0376310:intron 40.0%
! CAAAATATTTTGTGGGGGTG+GGG + chr3_1:76348067-76348086 Msa0376310:intron 40.0%
GACCAAGATATGAAATCCTC+AGG - chr3_1:76348170-76348189 Msa0376290:intron 40.0%
ATGCTACTATTCTCTGTTGC+AGG + chr3_1:76348374-76348393 Msa0376310:intron 40.0%
AAGAAGATACAGCAGAGACA+AGG + chr3_1:76348414-76348433 Msa0376310:CDS 40.0%
CATACTCTTCCTCTAGATCT+GGG - chr3_1:76348455-76348474 Msa0376290:intron 40.0%
TCATACTCTTCCTCTAGATC+TGG - chr3_1:76348456-76348475 Msa0376290:intron 40.0%
!! ATATACCGATTTACAACGCC+AGG + chr3_1:76348509-76348528 Msa0376310:three_prime_UTR 40.0%
!! TATACCGATTTACAACGCCA+GGG + chr3_1:76348510-76348529 Msa0376310:three_prime_UTR 40.0%
! TTTCTTTTCATATCAGCCCC+TGG - chr3_1:76348530-76348549 Msa0376290:intron 40.0%
TATTACTAAAAGGAGGGGGA+GGG + chr3_1:76348574-76348593 Msa0376310:three_prime_UTR 40.0%
!! GAAGCAATTTGTTTTCGGCA+GGG + chr3_1:76348625-76348644 Msa0376310:three_prime_UTR 40.0%
! TTGTTTTCGGCAGGGTTTTT+AGG + chr3_1:76348633-76348652 Msa0376310:three_prime_UTR 40.0%
! TGTTTTCGGCAGGGTTTTTA+GGG + chr3_1:76348634-76348653 Msa0376310:three_prime_UTR 40.0%
AGCAAAATATTCATCCCTGC+CGG + chr3_1:76348672-76348691 Msa0376310:three_prime_UTR 40.0%
CCAAATCATCTATTCCTGGT+TGG - chr3_1:76349023-76349042 Msa0376290:intron 40.0%
CCAACCAGGAATAGATGATT+TGG + chr3_1:76349020-76349039 Msa0376310:three_prime_UTR 40.0%
TCGATCGATAAGGATGGGAT+GGG + chr3_1:76347018-76347037 Msa0376310:exon 45.0%
ATGGGAAGCCTATACCTTAC+TGG + chr3_1:76347036-76347055 Msa0376310:CDS 45.0%
GCTGTATAAGCTACATGGTC+TGG + chr3_1:76347058-76347077 Msa0376310:CDS 45.0%
GCTGGATATATCTCAAGGGT+TGG + chr3_1:76347138-76347157 Msa0376310:intron 45.0%
TATTGTCCGCCTTTGCTTGT+TGG + chr3_1:76347281-76347300 Msa0376310:intron 45.0%
ATACTGCCAACAAGCAAAGG+CGG - chr3_1:76347290-76347309 Msa0376290:intron 45.0%
GCAATACTGCCAACAAGCAA+AGG - chr3_1:76347293-76347312 Msa0376290:intron 45.0%
GCGGGAACTATAGTTATTGG+GGG + chr3_1:76347439-76347458 Msa0376310:CDS 45.0%
GTCTATCAGTGATGTGTGTG+CGG + chr3_1:76347762-76347781 Msa0376310:intron 45.0%
ACAAACTAAACGCGCACTTG+CGG - chr3_1:76347906-76347925 Msa0376290:intron 45.0%
TGCAGGAAGCAAAAGAGCTT+TGG + chr3_1:76348391-76348410 Msa0376310:intron 45.0%
AGAGACAAGGAGTGAACAAG+TGG + chr3_1:76348427-76348446 Msa0376310:exon 45.0%
!! ATACCGATTTACAACGCCAG+GGG + chr3_1:76348511-76348530 Msa0376310:three_prime_UTR 45.0%
CTATTACTAAAAGGAGGGGG+AGG + chr3_1:76348573-76348592 Msa0376310:three_prime_UTR 45.0%
ATTACTAAAAGGAGGGGGAG+GGG + chr3_1:76348575-76348594 Msa0376310:three_prime_UTR 45.0%
!! GGAAGCAATTTGTTTTCGGC+AGG + chr3_1:76348624-76348643 Msa0376310:three_prime_UTR 45.0%
!! GTTTTCGGCAGGGTTTTTAG+GGG + chr3_1:76348635-76348654 Msa0376310:three_prime_UTR 45.0%
GCAAAATATTCATCCCTGCC+GGG + chr3_1:76348673-76348692 Msa0376310:three_prime_UTR 45.0%
CAAAATATTCATCCCTGCCG+GGG + chr3_1:76348674-76348693 Msa0376310:three_prime_UTR 45.0%
AATACCTTAGAGGAGAAGGG+AGG + chr3_1:76348964-76348983 Msa0376310:three_prime_UTR 45.0%
ATACCTTAGAGGAGAAGGGA+GGG + chr3_1:76348965-76348984 Msa0376310:three_prime_UTR 45.0%
GGAGACAAGCGTGTTAGAAA+CGG + chr3_1:76349177-76349196 Msa0376310:three_prime_UTR 45.0%
TCGATCGATAAGGATGGGAT+GGG + chr3_1:76347018-76347037 Msa0376310:exon 45.0%
ATGGGAAGCCTATACCTTAC+TGG + chr3_1:76347036-76347055 Msa0376310:CDS 45.0%
GCTGTATAAGCTACATGGTC+TGG + chr3_1:76347058-76347077 Msa0376310:CDS 45.0%
GCTGGATATATCTCAAGGGT+TGG + chr3_1:76347138-76347157 Msa0376310:intron 45.0%
TATTGTCCGCCTTTGCTTGT+TGG + chr3_1:76347281-76347300 Msa0376310:intron 45.0%
ATACTGCCAACAAGCAAAGG+CGG - chr3_1:76347290-76347309 Msa0376290:intron 45.0%
GCAATACTGCCAACAAGCAA+AGG - chr3_1:76347293-76347312 Msa0376290:intron 45.0%
GCGGGAACTATAGTTATTGG+GGG + chr3_1:76347439-76347458 Msa0376310:CDS 45.0%
GTCTATCAGTGATGTGTGTG+CGG + chr3_1:76347762-76347781 Msa0376310:intron 45.0%
ACAAACTAAACGCGCACTTG+CGG - chr3_1:76347906-76347925 Msa0376290:intron 45.0%
TGCAGGAAGCAAAAGAGCTT+TGG + chr3_1:76348391-76348410 Msa0376310:intron 45.0%
AGAGACAAGGAGTGAACAAG+TGG + chr3_1:76348427-76348446 Msa0376310:exon 45.0%
!! ATACCGATTTACAACGCCAG+GGG + chr3_1:76348511-76348530 Msa0376310:three_prime_UTR 45.0%
CTATTACTAAAAGGAGGGGG+AGG + chr3_1:76348573-76348592 Msa0376310:three_prime_UTR 45.0%
ATTACTAAAAGGAGGGGGAG+GGG + chr3_1:76348575-76348594 Msa0376310:three_prime_UTR 45.0%
!! GGAAGCAATTTGTTTTCGGC+AGG + chr3_1:76348624-76348643 Msa0376310:three_prime_UTR 45.0%
!! GTTTTCGGCAGGGTTTTTAG+GGG + chr3_1:76348635-76348654 Msa0376310:three_prime_UTR 45.0%
GCAAAATATTCATCCCTGCC+GGG + chr3_1:76348673-76348692 Msa0376310:three_prime_UTR 45.0%
CAAAATATTCATCCCTGCCG+GGG + chr3_1:76348674-76348693 Msa0376310:three_prime_UTR 45.0%
AATACCTTAGAGGAGAAGGG+AGG + chr3_1:76348964-76348983 Msa0376310:three_prime_UTR 45.0%
ATACCTTAGAGGAGAAGGGA+GGG + chr3_1:76348965-76348984 Msa0376310:three_prime_UTR 45.0%
!! ATAATATTTATTATATTGTA+CGG + chr3_1:76349119-76349138 Msa0376310:three_prime_UTR 5.0%
!! ATAATATTTATTATATTGTA+CGG + chr3_1:76349119-76349138 Msa0376310:three_prime_UTR 5.0%
CTCGATCGATAAGGATGGGA+TGG + chr3_1:76347017-76347036 Msa0376310:exon 50.0%
TAAGCTACATGGTCTGGGTC+AGG + chr3_1:76347064-76347083 Msa0376310:CDS 50.0%
GAGTCTTGACAGTCCCAAAG+TGG + chr3_1:76347181-76347200 Msa0376310:intron 50.0%
! CTGCGCTTGCAAAGTGCTTA+TGG + chr3_1:76347982-76348001 Msa0376310:intron 50.0%
!! TCTGTTCCCACTTTTCTCCC+CGG - chr3_1:76348694-76348713 Msa0376290:intron 50.0%
TACCTTAGAGGAGAAGGGAG+GGG + chr3_1:76348966-76348985 Msa0376310:three_prime_UTR 50.0%
!!! TCCATTTTAGCTCCCCAACC+AGG + chr3_1:76349006-76349025 Msa0376310:three_prime_UTR 50.0%
TCCTGGTTGGGGAGCTAAAA+TGG - chr3_1:76349010-76349029 Msa0376290:intron 50.0%
CTCGATCGATAAGGATGGGA+TGG + chr3_1:76347017-76347036 Msa0376310:exon 50.0%
TAAGCTACATGGTCTGGGTC+AGG + chr3_1:76347064-76347083 Msa0376310:CDS 50.0%
GAGTCTTGACAGTCCCAAAG+TGG + chr3_1:76347181-76347200 Msa0376310:intron 50.0%
! CTGCGCTTGCAAAGTGCTTA+TGG + chr3_1:76347982-76348001 Msa0376310:intron 50.0%
!! TCTGTTCCCACTTTTCTCCC+CGG - chr3_1:76348694-76348713 Msa0376290:intron 50.0%
TACCTTAGAGGAGAAGGGAG+GGG + chr3_1:76348966-76348985 Msa0376310:three_prime_UTR 50.0%
!!! TCCATTTTAGCTCCCCAACC+AGG + chr3_1:76349006-76349025 Msa0376310:three_prime_UTR 50.0%
TCCTGGTTGGGGAGCTAAAA+TGG - chr3_1:76349010-76349029 Msa0376290:intron 50.0%
CAACATGGGATGCGATGCCT+TGG + chr3_1:76347501-76347520 Msa0376310:CDS 55.0%
GGACTGGAGAGAAACAGCAC+TGG - chr3_1:76348308-76348327 Msa0376290:intron 55.0%
CAGCCCCTGGCGTTGTAAAT+CGG - chr3_1:76348517-76348536 Msa0376290:intron 55.0%
!! CGGCAGGGTTTTTAGGGGAA+TGG + chr3_1:76348640-76348659 Msa0376310:three_prime_UTR 55.0%
CAACATGGGATGCGATGCCT+TGG + chr3_1:76347501-76347520 Msa0376310:CDS 55.0%
GGACTGGAGAGAAACAGCAC+TGG - chr3_1:76348308-76348327 Msa0376290:intron 55.0%
CAGCCCCTGGCGTTGTAAAT+CGG - chr3_1:76348517-76348536 Msa0376290:intron 55.0%
!! CGGCAGGGTTTTTAGGGGAA+TGG + chr3_1:76348640-76348659 Msa0376310:three_prime_UTR 55.0%
CAAGTGGCGCCCAGATCTAG+AGG + chr3_1:76348443-76348462 Msa0376310:three_prime_UTR 60.0%
ATCCCTGCCGGGGAGAAAAG+TGG + chr3_1:76348684-76348703 Msa0376310:three_prime_UTR 60.0%
TCCCTGCCGGGGAGAAAAGT+GGG + chr3_1:76348685-76348704 Msa0376310:three_prime_UTR 60.0%
!! TCCCACTTTTCTCCCCGGCA+GGG - chr3_1:76348689-76348708 Msa0376290:intron 60.0%
!! TTCCCACTTTTCTCCCCGGC+AGG - chr3_1:76348690-76348709 Msa0376290:intron 60.0%
CTCCCCTCCCTTCTCCTCTA+AGG - chr3_1:76348971-76348990 Msa0376290:intron 60.0%
CAAGTGGCGCCCAGATCTAG+AGG + chr3_1:76348443-76348462 Msa0376310:three_prime_UTR 60.0%
ATCCCTGCCGGGGAGAAAAG+TGG + chr3_1:76348684-76348703 Msa0376310:three_prime_UTR 60.0%
TCCCTGCCGGGGAGAAAAGT+GGG + chr3_1:76348685-76348704 Msa0376310:three_prime_UTR 60.0%
!! TCCCACTTTTCTCCCCGGCA+GGG - chr3_1:76348689-76348708 Msa0376290:intron 60.0%
!! TTCCCACTTTTCTCCCCGGC+AGG - chr3_1:76348690-76348709 Msa0376290:intron 60.0%
CTCCCCTCCCTTCTCCTCTA+AGG - chr3_1:76348971-76348990 Msa0376290:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76346945 76349198 76346945 ID=Msa0376310;Name=Msa0376310
chr3_1 mRNA 76346945 76349198 76346945 ID=Msa0376310-mRNA-1;Parent=Msa0376310;Name=Msa0376310-mRNA-1;_AED=0.39;_eAED=0.39;_QI=91|1|1|1|1|1|3|757|80
chr3_1 exon 76346945 76347085 76346945 ID=Msa0376310-mRNA-1:exon:18101;Parent=Msa0376310-mRNA-1
chr3_1 exon 76347420 76347566 76347420 ID=Msa0376310-mRNA-1:exon:18102;Parent=Msa0376310-mRNA-1
chr3_1 exon 76348396 76349198 76348396 ID=Msa0376310-mRNA-1:exon:18103;Parent=Msa0376310-mRNA-1
chr3_1 five_prime_UTR 76346945 76347035 76346945 ID=Msa0376310-mRNA-1:five_prime_utr;Parent=Msa0376310-mRNA-1
chr3_1 CDS 76347036 76347085 76347036 ID=Msa0376310-mRNA-1:cds;Parent=Msa0376310-mRNA-1
chr3_1 CDS 76347420 76347566 76347420 ID=Msa0376310-mRNA-1:cds;Parent=Msa0376310-mRNA-1
chr3_1 CDS 76348396 76348441 76348396 ID=Msa0376310-mRNA-1:cds;Parent=Msa0376310-mRNA-1
chr3_1 three_prime_UTR 76348442 76349198 76348442 ID=Msa0376310-mRNA-1:three_prime_utr;Parent=Msa0376310-mRNA-1
Gene Sequence

>Msa0376310

ATGGGAAGCCTATACCTTACTGGCTGTATAAGCTACATGGTCTGGGTCAGGAATTTAAGTGCGAGATATGCGGGAACTATAGTTATTGGGGGCGTCGTGCTTTTGAACGACATTTTAAAGAATGGCGTCATCAACATGGGATGCGATGCCTTGGTATACCAAATACAAAGAACTTCAACGAAATTACGTCAATTGAGGAAGCAAAAGAGCTTTGGAAGAAGATACAGCAGAGACAAGGAGTGA

Protein sequence

>Msa0376310

MGSLYLTGCISYMVWVRNLSARYAGTIVIGGVVLLNDILKNGVINMGCDALVYQIQRTSTKLRQLRKQKSFGRRYSRDKE*