Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393930 | ABN09020.1 | 87.889 | 578 | 44 | 6 | 20 | 585 | 1 | 564 | 0.0 | 1015 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393930 | sp|O23732|GSHB_BRAJU | 67.546 | 493 | 144 | 2 | 92 | 584 | 53 | 529 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393930 | A2Q600 | 87.889 | 578 | 44 | 6 | 20 | 585 | 1 | 564 | 0.0 | 1015 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037720 | Msa1393930 | 0.809041 | 2.301537e-50 | -8.615850e-47 |
| Msa0083240 | Msa1393930 | 0.813972 | 1.952674e-51 | -8.615850e-47 |
| Msa1393930 | Msa1412410 | 0.812381 | 4.362866e-51 | -8.615850e-47 |
| Msa1393930 | Msa1427860 | 0.812231 | 4.705586e-51 | -8.615850e-47 |
| Msa0609270 | Msa1393930 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa0652700 | Msa1393930 | 0.817800 | 2.732284e-52 | -8.615850e-47 |
| Msa0815650 | Msa1393930 | 0.820409 | 6.964924e-53 | -8.615850e-47 |
| Msa0129640 | Msa1393930 | 0.817574 | 3.072916e-52 | -8.615850e-47 |
| Msa0132430 | Msa1393930 | 0.800190 | 1.618779e-48 | -8.615850e-47 |
| Msa1265670 | Msa1393930 | -0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa1300730 | Msa1393930 | 0.814916 | 1.207196e-51 | -8.615850e-47 |
| Msa0455830 | Msa1393930 | 0.801749 | 7.774668e-49 | -8.615850e-47 |
| Msa0459630 | Msa1393930 | 0.802386 | 5.751329e-49 | -8.615850e-47 |
| Msa0480770 | Msa1393930 | 0.814701 | 1.347605e-51 | -8.615850e-47 |
| Msa1038940 | Msa1393930 | 0.933597 | 1.473159e-95 | -8.615850e-47 |
| Msa0267230 | Msa1393930 | 0.952345 | 2.961067e-110 | -8.615850e-47 |
| Msa1128720 | Msa1393930 | 0.976808 | 1.538563e-142 | -8.615850e-47 |
| Msa1165010 | Msa1393930 | 0.983437 | 9.690555e-158 | -8.615850e-47 |
| Msa1172720 | Msa1393930 | 0.824431 | 8.100095e-54 | -8.615850e-47 |
| Msa1214780 | Msa1393930 | 0.808662 | 2.773998e-50 | -8.615850e-47 |
| Msa0945230 | Msa1393930 | 0.812220 | 4.731757e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393930 | MtrunA17_Chr7g0273151 | 79.532 | 342 | 50 | 5 | 21 | 350 | 3 | 336 | 0.0 | 529 |
| Msa1393930 | MtrunA17_Chr7g0273161 | 96.414 | 251 | 9 | 0 | 335 | 585 | 2 | 252 | 3.70e-178 | 503 |
| Msa1393930 | MtrunA17_Chr7g0273131 | 63.958 | 283 | 93 | 4 | 69 | 348 | 45 | 321 | 5.71e-117 | 350 |
| Msa1393930 | MtrunA17_Chr7g0273141 | 79.213 | 178 | 37 | 0 | 368 | 545 | 5 | 182 | 1.94e-104 | 312 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393930 | AT5G27380.1 | 68.033 | 488 | 140 | 2 | 97 | 584 | 67 | 538 | 0.0 | 713 |
Find 136 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTGGTACTTATTTA+AGG | 0.124901 | tig0021765:+97586 | Msa1393930:CDS |
| CTTGTAGAATTTCTCCTTCT+TGG | 0.158760 | tig0021765:-95271 | None:intergenic |
| GTCTCAGAACTTGGGATATT+TGG | 0.168043 | tig0021765:+97573 | Msa1393930:CDS |
| GCTTGCTTCCATTTACTTTC+TGG | 0.184316 | tig0021765:-93909 | None:intergenic |
| ACACCTGCCATCACCATTAA+TGG | 0.245975 | tig0021765:+93336 | Msa1393930:CDS |
| GCTGCTGCTGCTTCTGCTTC+TGG | 0.247053 | tig0021765:+93162 | Msa1393930:CDS |
| TAGAGCACCTCTAACTTATC+TGG | 0.247256 | tig0021765:+97836 | Msa1393930:three_prime_UTR |
| AAGTTCCTGTTGAATCTTCT+TGG | 0.247926 | tig0021765:-96163 | None:intergenic |
| TAGCCAAGGCCTCGGCATTC+TGG | 0.248762 | tig0021765:-94835 | None:intergenic |
| CGTCATTTCCAGAAAGTAAA+TGG | 0.257725 | tig0021765:+93901 | Msa1393930:CDS |
| AAAACTGCAGCAGAAGTATT+TGG | 0.268628 | tig0021765:-97516 | None:intergenic |
| ATTCTGGCTGACAGCATTAT+TGG | 0.283845 | tig0021765:-94819 | None:intergenic |
| AGCTTATGATGCTCTTGTTT+GGG | 0.286202 | tig0021765:+93443 | Msa1393930:CDS |
| CTCTATTTGCAAAAGGGATT+TGG | 0.292630 | tig0021765:-94479 | None:intergenic |
| TATCATTATGATTGTGGTTC+AGG | 0.293008 | tig0021765:+94978 | Msa1393930:CDS |
| AGGAGAAGGAGGAATGTATT+TGG | 0.308769 | tig0021765:-93217 | None:intergenic |
| GACTTGAATTTGCAGGAATA+AGG | 0.309020 | tig0021765:+97695 | Msa1393930:intron |
| CAGTTGCAGTCATTTACTTC+AGG | 0.313042 | tig0021765:+95419 | Msa1393930:CDS |
| CTTTGCAGGACTGTGGAGTT+TGG | 0.317810 | tig0021765:+97229 | Msa1393930:CDS |
| GGCTTCATTACAAATAATTC+AGG | 0.320071 | tig0021765:-97287 | None:intergenic |
| ACAGGAGGCTCAAATGATAA+TGG | 0.320779 | tig0021765:-97885 | None:intergenic |
| CCCTTCAATATCGTATCATT+TGG | 0.320965 | tig0021765:+96134 | Msa1393930:CDS |
| CCATGGAAAATTGCTTGGTC+TGG | 0.322664 | tig0021765:+94778 | Msa1393930:CDS |
| TAGTACCTCCTCCTTCTCTC+TGG | 0.326878 | tig0021765:-97310 | None:intergenic |
| ACTATTTCATCTTCATTTGC+TGG | 0.337912 | tig0021765:+94508 | Msa1393930:CDS |
| TAGCTTATGATGCTCTTGTT+TGG | 0.342114 | tig0021765:+93442 | Msa1393930:CDS |
| AACTTAATAGGAAATAAGAT+TGG | 0.357115 | tig0021765:+94420 | Msa1393930:intron |
| TCTTTCCAATTACAGAAATC+AGG | 0.362565 | tig0021765:+93828 | Msa1393930:intron |
| CTTGTTTGGGCCTCTCTTCA+CGG | 0.363437 | tig0021765:+93456 | Msa1393930:CDS |
| AAAATGCGTGAATGCTTTGC+AGG | 0.374193 | tig0021765:+97215 | Msa1393930:CDS |
| GTTGACCGTGTTAGTTTAGA+TGG | 0.384757 | tig0021765:+93963 | Msa1393930:CDS |
| CTCTCTTCACGGTCTCCTCA+TGG | 0.391323 | tig0021765:+93467 | Msa1393930:CDS |
| ATGGAAGCAAGCTTCTGATT+TGG | 0.394917 | tig0021765:+93920 | Msa1393930:CDS |
| CAGCCAGAATGCCGAGGCCT+TGG | 0.406436 | tig0021765:+94832 | Msa1393930:CDS |
| GACCACGCCGTCTCAGAACT+TGG | 0.416285 | tig0021765:+97564 | Msa1393930:CDS |
| CGATACGATGTTGAAGCAAT+AGG | 0.419718 | tig0021765:+93135 | Msa1393930:CDS |
| CAGAAATCAGGAATGGTTCC+TGG | 0.422349 | tig0021765:+93840 | Msa1393930:intron |
| TTTGTTGAGCTGTAGCATCT+TGG | 0.432576 | tig0021765:-94237 | None:intergenic |
| TGTTGAGCTCTATTTGCAAA+AGG | 0.432901 | tig0021765:-94486 | None:intergenic |
| CTCATAAAATTGCAGAAAAC+GGG | 0.433571 | tig0021765:+97450 | Msa1393930:CDS |
| CAGGAGGCTCAAATGATAAT+GGG | 0.436248 | tig0021765:-97884 | None:intergenic |
| CCTCATAAAATTGCAGAAAA+CGG | 0.438181 | tig0021765:+97449 | Msa1393930:CDS |
| TCAACAAGTTCATTGAATAT+AGG | 0.442386 | tig0021765:-93945 | None:intergenic |
| AGTACCTCCTCCTTCTCTCT+GGG | 0.443480 | tig0021765:-97309 | None:intergenic |
| ACTTAATAGGAAATAAGATT+GGG | 0.446606 | tig0021765:+94421 | Msa1393930:intron |
| TACTTTCTGGAAATGACGTT+GGG | 0.448557 | tig0021765:-93896 | None:intergenic |
| AATATACCCAGATAAGTTAG+AGG | 0.449017 | tig0021765:-97843 | None:intergenic |
| TACAAGGTAAAGATAGAAGA+AGG | 0.451074 | tig0021765:-93257 | None:intergenic |
| TCAATATCGTATCATTTGGT+TGG | 0.454140 | tig0021765:+96138 | Msa1393930:CDS |
| GCTTGGTCTGGATTCAGAAA+AGG | 0.454195 | tig0021765:+94790 | Msa1393930:CDS |
| TGATGATGATGAGACATTAG+AGG | 0.456067 | tig0021765:-93300 | None:intergenic |
| TCTTGCCATGGAAAATTGCT+TGG | 0.461118 | tig0021765:+94773 | Msa1393930:CDS |
| GACGAAGGTGGGGTTGCAGC+TGG | 0.464192 | tig0021765:+97777 | Msa1393930:CDS |
| TGGACAAAGGTATTATTGTC+TGG | 0.469663 | tig0021765:-93197 | None:intergenic |
| GATTCTGAAGGATAATCAAC+TGG | 0.471685 | tig0021765:-95454 | None:intergenic |
| GTTGAGCTCTATTTGCAAAA+GGG | 0.477698 | tig0021765:-94485 | None:intergenic |
| GACGTTGGGAATAATGCAAA+CGG | 0.479910 | tig0021765:-93882 | None:intergenic |
| AGAGGCAGACAAATATAAAC+AGG | 0.483894 | tig0021765:-97903 | None:intergenic |
| AGTTTATAACTACGGTGATA+AGG | 0.484715 | tig0021765:-95060 | None:intergenic |
| ACGTTGGGAATAATGCAAAC+GGG | 0.485054 | tig0021765:-93881 | None:intergenic |
| GAATTTGCAGGAATAAGGAT+AGG | 0.485387 | tig0021765:+97700 | Msa1393930:intron |
| GAAGGAGAAATTCTACAAGA+TGG | 0.488802 | tig0021765:+95275 | Msa1393930:CDS |
| CATGGGAGATAAATCTTACC+AGG | 0.493452 | tig0021765:+93485 | Msa1393930:CDS |
| CTCTTGTCACTCAACTTCAT+AGG | 0.498422 | tig0021765:+94539 | Msa1393930:CDS |
| AGTTGCAGTCATTTACTTCA+GGG | 0.502680 | tig0021765:+95420 | Msa1393930:CDS |
| CCGAGGCCTTGGCTAAAGCT+TGG | 0.504909 | tig0021765:+94843 | Msa1393930:CDS |
| AGGTACATACTTTCTTGCCA+TGG | 0.512977 | tig0021765:+94761 | Msa1393930:intron |
| GCAGTCATTTACTTCAGGGC+TGG | 0.514362 | tig0021765:+95424 | Msa1393930:CDS |
| AGTATTGATCAACAACTTCT+CGG | 0.516257 | tig0021765:+93414 | Msa1393930:CDS |
| TCTCTTCACGGTCTCCTCAT+GGG | 0.517899 | tig0021765:+93468 | Msa1393930:CDS |
| TTCATCGCCATTAATGGTGA+TGG | 0.520509 | tig0021765:-93343 | None:intergenic |
| CCAATTACAGAAATCAGGAA+TGG | 0.520677 | tig0021765:+93833 | Msa1393930:intron |
| TATTTATGGTGAAGCAGTGC+GGG | 0.520781 | tig0021765:+97422 | Msa1393930:CDS |
| CAGGGCTATCATTATGATTG+TGG | 0.521933 | tig0021765:+94972 | Msa1393930:intron |
| ACCAAATGATACGATATTGA+AGG | 0.522355 | tig0021765:-96135 | None:intergenic |
| TATCATCATCTGACGAAGGT+GGG | 0.522364 | tig0021765:+97766 | Msa1393930:CDS |
| TGGCTGACAGCATTATTGGC+AGG | 0.526065 | tig0021765:-94815 | None:intergenic |
| TGGCACCAAGAAGATTCAAC+AGG | 0.526530 | tig0021765:+96158 | Msa1393930:CDS |
| AATTTGCAGGAATAAGGATA+GGG | 0.531981 | tig0021765:+97701 | Msa1393930:intron |
| ATCAGGAATGGTTCCTGGTG+TGG | 0.532782 | tig0021765:+93845 | Msa1393930:CDS |
| CAACAGGAACTTGCAAAGCC+AGG | 0.536479 | tig0021765:+96174 | Msa1393930:CDS |
| TGATAATCATCAGCGAATAG+AGG | 0.539988 | tig0021765:-93390 | None:intergenic |
| CCAAGCTTTAGCCAAGGCCT+CGG | 0.543942 | tig0021765:-94843 | None:intergenic |
| TCCTTAGCTTTGAACACGCA+TGG | 0.547326 | tig0021765:+95212 | Msa1393930:CDS |
| ATATGCAGGAATGGAGAGCT+AGG | 0.552197 | tig0021765:+96079 | Msa1393930:intron |
| CAAAGCCAGGTGTTCTTGAG+AGG | 0.552723 | tig0021765:+96187 | Msa1393930:CDS |
| TCAGGAATGGTTCCTGGTGT+GGG | 0.557885 | tig0021765:+93846 | Msa1393930:CDS |
| GTAATGAAGCCCCAGAGAGA+AGG | 0.558389 | tig0021765:+97299 | Msa1393930:CDS |
| ATGAAGCCCCAGAGAGAAGG+AGG | 0.563223 | tig0021765:+97302 | Msa1393930:CDS |
| ACCATGCGTGTTCAAAGCTA+AGG | 0.563501 | tig0021765:-95213 | None:intergenic |
| TTACTTTCTGGAAATGACGT+TGG | 0.567133 | tig0021765:-93897 | None:intergenic |
| TTCTTCAAGAATCTCTCTCA+AGG | 0.567231 | tig0021765:+93991 | Msa1393930:CDS |
| ATGGAGAGCTAGGCTACTGA+TGG | 0.569626 | tig0021765:+96089 | Msa1393930:CDS |
| TCATCAGCGAATAGAGGAGG+AGG | 0.570573 | tig0021765:-93384 | None:intergenic |
| GAACAGCAGAAAGAAAATGC+TGG | 0.573205 | tig0021765:-95023 | None:intergenic |
| TCAGCGAATAGAGGAGGAGG+AGG | 0.573514 | tig0021765:-93381 | None:intergenic |
| ATCATCATCTGACGAAGGTG+GGG | 0.576564 | tig0021765:+97767 | Msa1393930:CDS |
| TGGCCACTTACTGATTCTGA+AGG | 0.580546 | tig0021765:-95466 | None:intergenic |
| AGAGCACCTCTAACTTATCT+GGG | 0.583038 | tig0021765:+97837 | Msa1393930:three_prime_UTR |
| TCAATCCAGAACTAAGCAAG+TGG | 0.583274 | tig0021765:+94181 | Msa1393930:intron |
| CCAAATGATACGATATTGAA+GGG | 0.583942 | tig0021765:-96134 | None:intergenic |
| GGAGGAATGTATTTGGACAA+AGG | 0.587129 | tig0021765:-93210 | None:intergenic |
| TCGCCATTAATGGTGATGGC+AGG | 0.589219 | tig0021765:-93339 | None:intergenic |
| ATGAATATCTAAAAGTCTAG+AGG | 0.596316 | tig0021765:-94213 | None:intergenic |
| TACAATTGTTCGCAAAACGA+TGG | 0.597280 | tig0021765:+95238 | Msa1393930:CDS |
| GTCGTCGAGAAATTTATACA+AGG | 0.599831 | tig0021765:-93273 | None:intergenic |
| CGATGTTGAAGCAATAGGCA+TGG | 0.604299 | tig0021765:+93140 | Msa1393930:CDS |
| ATATCATCATCTGACGAAGG+TGG | 0.604927 | tig0021765:+97765 | Msa1393930:CDS |
| TGTAACTATACAACACACCA+TGG | 0.605619 | tig0021765:-97973 | None:intergenic |
| GCATGCATCAATCCCACACC+AGG | 0.606616 | tig0021765:-93858 | None:intergenic |
| AGATACCTCTCAAGAACACC+TGG | 0.608405 | tig0021765:-96192 | None:intergenic |
| ATGGCAGAAGTTGACCAAGA+AGG | 0.613185 | tig0021765:+95257 | Msa1393930:CDS |
| ACCACGCCGTCTCAGAACTT+GGG | 0.613931 | tig0021765:+97565 | Msa1393930:CDS |
| CATGAGGAGACCGTGAAGAG+AGG | 0.614477 | tig0021765:-93466 | None:intergenic |
| AAGCCCCAGAGAGAAGGAGG+AGG | 0.623964 | tig0021765:+97305 | Msa1393930:CDS |
| AAATATCCCAAGTTCTGAGA+CGG | 0.625935 | tig0021765:-97571 | None:intergenic |
| ACTGTGGAGTTTGGATGACT+CGG | 0.630953 | tig0021765:+97238 | Msa1393930:CDS |
| GGAGTGAGTATAATAACCCC+AGG | 0.633676 | tig0021765:+94864 | Msa1393930:CDS |
| CTCACTCCAAGCTTTAGCCA+AGG | 0.636780 | tig0021765:-94849 | None:intergenic |
| TGCTGTCAGCCAGAATGCCG+AGG | 0.640820 | tig0021765:+94826 | Msa1393930:CDS |
| GCGTAATGGTTGTTGGCACA+AGG | 0.648992 | tig0021765:+97542 | Msa1393930:CDS |
| CAGCTTACATACTTATGCAG+AGG | 0.649813 | tig0021765:+97487 | Msa1393930:CDS |
| CGTTGGGAATAATGCAAACG+GGG | 0.650289 | tig0021765:-93880 | None:intergenic |
| GTACCTCCTCCTTCTCTCTG+GGG | 0.656439 | tig0021765:-97308 | None:intergenic |
| TCCCAAGTTCTGAGACGGCG+TGG | 0.660655 | tig0021765:-97566 | None:intergenic |
| AAAATATCATCATCTGACGA+AGG | 0.662845 | tig0021765:+97762 | Msa1393930:CDS |
| GGCAGACAAATATAAACAGG+AGG | 0.666515 | tig0021765:-97900 | None:intergenic |
| TAATCATCAGCGAATAGAGG+AGG | 0.667692 | tig0021765:-93387 | None:intergenic |
| GTTGTCGTGAATAATCAAAG+TGG | 0.670695 | tig0021765:+97723 | Msa1393930:CDS |
| GTAACTATACAACACACCAT+GGG | 0.672655 | tig0021765:-97972 | None:intergenic |
| GAGGTGCTCTACATCAAGTG+AGG | 0.688457 | tig0021765:-97824 | None:intergenic |
| ATATTTATGGTGAAGCAGTG+CGG | 0.689917 | tig0021765:+97421 | Msa1393930:CDS |
| ATTCACCATCTAAACTAACA+CGG | 0.698126 | tig0021765:-93968 | None:intergenic |
| GGTAAGATTTATCTCCCATG+AGG | 0.699020 | tig0021765:-93482 | None:intergenic |
| GTGAATGCTTTGCAGGACTG+TGG | 0.717162 | tig0021765:+97222 | Msa1393930:CDS |
| ATAACGTAAAATAAACAACG+TGG | 0.837611 | tig0021765:-97949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTTTTTTTTATAAAG+TGG | + | tig0021765:94350-94369 | Msa1393930:intron | 10.0% |
| !!! | TTTATATTTTAAACATATTC+TGG | + | tig0021765:95175-95194 | Msa1393930:intron | 10.0% |
| !!! | AAATACAAATCAATATATTT+TGG | - | tig0021765:97098-97117 | None:intergenic | 10.0% |
| !! | TGTAATCATTTAGAAATATA+AGG | - | tig0021765:94950-94969 | None:intergenic | 15.0% |
| !! | TCAACAAATAATATAACTTA+TGG | - | tig0021765:95803-95822 | None:intergenic | 15.0% |
| !!! | AAGTTATATTATTTGTTGAT+TGG | + | tig0021765:95804-95823 | Msa1393930:intron | 15.0% |
| !! | GTTTAAATATTTATCTTATC+CGG | + | tig0021765:96830-96849 | Msa1393930:intron | 15.0% |
| !! | AAATGAAAATAAGAAGAAGA+AGG | - | tig0021765:93520-93539 | None:intergenic | 20.0% |
| !! | ATAGTAATTTACAAAATCAC+TGG | + | tig0021765:93646-93665 | Msa1393930:intron | 20.0% |
| !! | ATTTGAGCTGTAAATAAATT+AGG | + | tig0021765:93762-93781 | Msa1393930:intron | 20.0% |
| !! | TTTAAAAATATGAACAAGCA+AGG | + | tig0021765:93785-93804 | Msa1393930:intron | 20.0% |
| !!! | TTTTTTATAAAGTGGATCAA+AGG | + | tig0021765:94358-94377 | Msa1393930:intron | 20.0% |
| !!! | TGATATATTACTTTTACTGT+TGG | + | tig0021765:94388-94407 | Msa1393930:intron | 20.0% |
| !! | AACTTAATAGGAAATAAGAT+TGG | + | tig0021765:94420-94439 | Msa1393930:intron | 20.0% |
| !! | ACTTAATAGGAAATAAGATT+GGG | + | tig0021765:94421-94440 | Msa1393930:intron | 20.0% |
| !! | ATTTCTAAATGATTACATAC+AGG | + | tig0021765:94953-94972 | Msa1393930:intron | 20.0% |
| !! | TTTCTAAATGATTACATACA+GGG | + | tig0021765:94954-94973 | Msa1393930:intron | 20.0% |
| !! | CTATTGTAAGTTTATAACTA+CGG | - | tig0021765:95071-95090 | None:intergenic | 20.0% |
| !! | AAAGTGTAGTTTATCATATA+AGG | + | tig0021765:95141-95160 | Msa1393930:intron | 20.0% |
| !!! | CAATTTTTTTACTGTAGTAA+TGG | + | tig0021765:95391-95410 | Msa1393930:intron | 20.0% |
| !!! | TATATTATTTGTTGATTGGT+CGG | + | tig0021765:95808-95827 | Msa1393930:intron | 20.0% |
| !! | TAATCTAACGGTAAAAAAAA+AGG | - | tig0021765:95884-95903 | None:intergenic | 20.0% |
| !! | GTTTGAAAAAAGTAATCTAA+CGG | - | tig0021765:95896-95915 | None:intergenic | 20.0% |
| !! | CATGATTAATCAAATAAGTA+AGG | - | tig0021765:96384-96403 | None:intergenic | 20.0% |
| !! | CTTACTTATTTGATTAATCA+TGG | + | tig0021765:96382-96401 | Msa1393930:intron | 20.0% |
| !! | TATTTGATTAATCATGGATA+TGG | + | tig0021765:96388-96407 | Msa1393930:intron | 20.0% |
| !! | AACAAGATATGAAAAAGATA+TGG | - | tig0021765:96480-96499 | None:intergenic | 20.0% |
| !!! | AATTTTGGAAGAAAAATTGA+AGG | - | tig0021765:96874-96893 | None:intergenic | 20.0% |
| !! | GAAAAAAAAGCAAAATAAGA+AGG | + | tig0021765:96908-96927 | Msa1393930:intron | 20.0% |
| !!! | GAAGGAAAAAAAAATCATTT+TGG | + | tig0021765:96926-96945 | Msa1393930:intron | 20.0% |
| !!! | AAAAAATCATTTTGGATGAT+CGG | + | tig0021765:96934-96953 | Msa1393930:intron | 20.0% |
| !!! | AATATAATTTTCAACAGAGT+TGG | - | tig0021765:97371-97390 | None:intergenic | 20.0% |
| !!! | ATGATCTGTAATTATTTTTC+AGG | + | tig0021765:97393-97412 | Msa1393930:intron | 20.0% |
| !!! | TTTTCAGGAAACAATATTTA+TGG | + | tig0021765:97408-97427 | Msa1393930:intron | 20.0% |
| ! | GCTTAGTAAAAATGAGTTTA+TGG | - | tig0021765:93581-93600 | None:intergenic | 25.0% |
| ! | AAACTCATTGTAAAACCAAA+CGG | - | tig0021765:93617-93636 | None:intergenic | 25.0% |
| ! | TCAACAAGTTCATTGAATAT+AGG | - | tig0021765:93948-93967 | None:intergenic | 25.0% |
| ! | TATTCTTATTCATTGTCAAG+TGG | + | tig0021765:94048-94067 | Msa1393930:intron | 25.0% |
| ! | ATTCTTATTCATTGTCAAGT+GGG | + | tig0021765:94049-94068 | Msa1393930:intron | 25.0% |
| ! | TGACAATTAAAAGCTGAAAA+TGG | - | tig0021765:94136-94155 | None:intergenic | 25.0% |
| ! | ATGAATATCTAAAAGTCTAG+AGG | - | tig0021765:94216-94235 | None:intergenic | 25.0% |
| !! | TGGCATCAATTTAACTTAAT+AGG | + | tig0021765:94408-94427 | Msa1393930:intron | 25.0% |
| ! | GAAGTGAAACAAATATCTAA+AGG | - | tig0021765:94623-94642 | None:intergenic | 25.0% |
| !! | GAAAAAGGATATTTGTTTCT+CGG | - | tig0021765:94896-94915 | None:intergenic | 25.0% |
| ! | AGAATAAAGTGAACTGAAAA+AGG | - | tig0021765:94911-94930 | None:intergenic | 25.0% |
| !! | CTTTATTCTACTGCTAATTT+TGG | + | tig0021765:94922-94941 | Msa1393930:intron | 25.0% |
| ! | ACAAGCAAGAAAAAATAAAC+TGG | - | tig0021765:95489-95508 | None:intergenic | 25.0% |
| ! | AACTCATTATCTGAAAGATT+AGG | + | tig0021765:95562-95581 | Msa1393930:intron | 25.0% |
| ! | ATTATCTGAAAGATTAGGAA+AGG | + | tig0021765:95567-95586 | Msa1393930:intron | 25.0% |
| ! | AAACCAACAGAACAAAAATA+AGG | - | tig0021765:95679-95698 | None:intergenic | 25.0% |
| ! | GGAAGTTATTTATCTTCAAA+AGG | - | tig0021765:95754-95773 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTTCCAGTT+TGG | + | tig0021765:95758-95777 | Msa1393930:intron | 25.0% |
| ! | AACAATAACTGAAAAAAGCA+AGG | - | tig0021765:96242-96261 | None:intergenic | 25.0% |
| ! | TTAATCAAATAAGTAAGGCA+TGG | - | tig0021765:96379-96398 | None:intergenic | 25.0% |
| !! | AAATTGAAGGTACAAGAAAA+GGG | - | tig0021765:96861-96880 | None:intergenic | 25.0% |
| !! | AAAATTGAAGGTACAAGAAA+AGG | - | tig0021765:96862-96881 | None:intergenic | 25.0% |
| ! | ATACTTCCTATTATGGTTAT+AGG | + | tig0021765:96990-97009 | Msa1393930:intron | 25.0% |
| ! | GTAATTCCTATAACCATAAT+AGG | - | tig0021765:96999-97018 | None:intergenic | 25.0% |
| ! | GGATATTTGGTACTTATTTA+AGG | + | tig0021765:97586-97605 | Msa1393930:CDS | 25.0% |
| ! | TCTGCAAAAAATTGAAAGAA+GGG | + | tig0021765:97923-97942 | Msa1393930:three_prime_UTR | 25.0% |
| ! | ATAACGTAAAATAAACAACG+TGG | - | tig0021765:97952-97971 | None:intergenic | 25.0% |
| TACAAGGTAAAGATAGAAGA+AGG | - | tig0021765:93260-93279 | None:intergenic | 30.0% | |
| !! | AGTATTGATCAACAACTTCT+CGG | + | tig0021765:93414-93433 | Msa1393930:CDS | 30.0% |
| TCTTTCCAATTACAGAAATC+AGG | + | tig0021765:93828-93847 | Msa1393930:intron | 30.0% | |
| ATTCACCATCTAAACTAACA+CGG | - | tig0021765:93971-93990 | None:intergenic | 30.0% | |
| AGTGAAGTGAATTAGTAGAA+CGG | - | tig0021765:94018-94037 | None:intergenic | 30.0% | |
| ATGGAAAAGACGTAGAAAAA+AGG | - | tig0021765:94117-94136 | None:intergenic | 30.0% | |
| TATGTAGCGTTATTGTGAAA+AGG | - | tig0021765:94323-94342 | None:intergenic | 30.0% | |
| ACTATTTCATCTTCATTTGC+TGG | + | tig0021765:94508-94527 | Msa1393930:CDS | 30.0% | |
| !! | AAATTCTGAGGTGAAACATA+GGG | - | tig0021765:94707-94726 | None:intergenic | 30.0% |
| !! | AAAATTCTGAGGTGAAACAT+AGG | - | tig0021765:94708-94727 | None:intergenic | 30.0% |
| ! | TTTTTCTGACCCAATTGTTT+CGG | + | tig0021765:94725-94744 | Msa1393930:intron | 30.0% |
| AATCACAAACCGAAACAATT+GGG | - | tig0021765:94737-94756 | None:intergenic | 30.0% | |
| AAATCACAAACCGAAACAAT+TGG | - | tig0021765:94738-94757 | None:intergenic | 30.0% | |
| TATCATTATGATTGTGGTTC+AGG | + | tig0021765:94978-94997 | Msa1393930:CDS | 30.0% | |
| AGTTTATAACTACGGTGATA+AGG | - | tig0021765:95063-95082 | None:intergenic | 30.0% | |
| TAAAGAAAGTCAGTTTCTGA+TGG | - | tig0021765:95328-95347 | None:intergenic | 30.0% | |
| ! | ACTGACTTTCTTTAAGTTTG+TGG | + | tig0021765:95334-95353 | Msa1393930:intron | 30.0% |
| !! | AAAAGGTGTTCAATACTTGT+AGG | - | tig0021765:95737-95756 | None:intergenic | 30.0% |
| ! | TATGGAACTCAACTATTTTG+AGG | - | tig0021765:95785-95804 | None:intergenic | 30.0% |
| ACCTCAATCTTTCTATTCTA+TGG | + | tig0021765:95938-95957 | Msa1393930:intron | 30.0% | |
| TCCATAGAATAGAAAGATTG+AGG | - | tig0021765:95942-95961 | None:intergenic | 30.0% | |
| CCAAATGATACGATATTGAA+GGG | - | tig0021765:96137-96156 | None:intergenic | 30.0% | |
| ACCAAATGATACGATATTGA+AGG | - | tig0021765:96138-96157 | None:intergenic | 30.0% | |
| TCAATATCGTATCATTTGGT+TGG | + | tig0021765:96138-96157 | Msa1393930:CDS | 30.0% | |
| CCAACCAATCAAATCATAAA+TGG | - | tig0021765:96423-96442 | None:intergenic | 30.0% | |
| CCATTTATGATTTGATTGGT+TGG | + | tig0021765:96420-96439 | Msa1393930:intron | 30.0% | |
| TGCATCGTTAATAACTGAAA+CGG | + | tig0021765:96560-96579 | Msa1393930:intron | 30.0% | |
| TCATAAGAATGAATTCAACG+CGG | + | tig0021765:96660-96679 | Msa1393930:intron | 30.0% | |
| !! | GTTTTGATGTTAGAGAAAAC+TGG | + | tig0021765:96682-96701 | Msa1393930:intron | 30.0% |
| ! | CGTTAAATCATGATTAGTTG+CGG | - | tig0021765:96708-96727 | None:intergenic | 30.0% |
| CGCAACTAATCATGATTTAA+CGG | + | tig0021765:96706-96725 | Msa1393930:intron | 30.0% | |
| GCAACTAATCATGATTTAAC+GGG | + | tig0021765:96707-96726 | Msa1393930:intron | 30.0% | |
| ! | AATTGAAGGTACAAGAAAAG+GGG | - | tig0021765:96860-96879 | None:intergenic | 30.0% |
| ! | CAAGACAGAACAAGTAATTT+TGG | - | tig0021765:96889-96908 | None:intergenic | 30.0% |
| TGTAAATGAATATGTTCCCT+TGG | + | tig0021765:96957-96976 | Msa1393930:intron | 30.0% | |
| TACACTCATACTTCCTATTA+TGG | + | tig0021765:96983-97002 | Msa1393930:intron | 30.0% | |
| !!! | CAGTTTTGATTCAAGGATTT+AGG | - | tig0021765:97160-97179 | None:intergenic | 30.0% |
| GGCTTCATTACAAATAATTC+AGG | - | tig0021765:97290-97309 | None:intergenic | 30.0% | |
| ! | AAAGTTAGATCACGTTTTAG+GGG | - | tig0021765:97339-97358 | None:intergenic | 30.0% |
| ! | GAAAGTTAGATCACGTTTTA+GGG | - | tig0021765:97340-97359 | None:intergenic | 30.0% |
| ! | AGAAAGTTAGATCACGTTTT+AGG | - | tig0021765:97341-97360 | None:intergenic | 30.0% |
| ! | CGTTTTCTGCAATTTTATGA+GGG | - | tig0021765:97451-97470 | None:intergenic | 30.0% |
| CCTCATAAAATTGCAGAAAA+CGG | + | tig0021765:97449-97468 | Msa1393930:CDS | 30.0% | |
| CTCATAAAATTGCAGAAAAC+GGG | + | tig0021765:97450-97469 | Msa1393930:CDS | 30.0% | |
| GACTATATATCTCTATAGCT+CGG | + | tig0021765:97619-97638 | Msa1393930:intron | 30.0% | |
| AATTTGCAGGAATAAGGATA+GGG | + | tig0021765:97701-97720 | Msa1393930:intron | 30.0% | |
| AAAATATCATCATCTGACGA+AGG | + | tig0021765:97762-97781 | Msa1393930:CDS | 30.0% | |
| AATATACCCAGATAAGTTAG+AGG | - | tig0021765:97846-97865 | None:intergenic | 30.0% | |
| !!! | CTTCTTTCAATTTTTTGCAG+AGG | - | tig0021765:97924-97943 | None:intergenic | 30.0% |
| CTCTGCAAAAAATTGAAAGA+AGG | + | tig0021765:97922-97941 | Msa1393930:three_prime_UTR | 30.0% | |
| !!! | GTTTATTTTACGTTATCCCA+TGG | + | tig0021765:97956-97975 | Msa1393930:three_prime_UTR | 30.0% |
| !! | TTTGAGCAAAAAGCATTAAC+AGG | - | tig0021765:98008-98027 | None:intergenic | 30.0% |
| !! | TGGACAAAGGTATTATTGTC+TGG | - | tig0021765:93200-93219 | None:intergenic | 35.0% |
| !!! | AGAAGGTTGTTGTTTTTGTG+AGG | - | tig0021765:93243-93262 | None:intergenic | 35.0% |
| GTCGTCGAGAAATTTATACA+AGG | - | tig0021765:93276-93295 | None:intergenic | 35.0% | |
| ! | TGATGATGATGAGACATTAG+AGG | - | tig0021765:93303-93322 | None:intergenic | 35.0% |
| !! | GTTTTGTTCATCGCCATTAA+TGG | - | tig0021765:93352-93371 | None:intergenic | 35.0% |
| TGATAATCATCAGCGAATAG+AGG | - | tig0021765:93393-93412 | None:intergenic | 35.0% | |
| TAGCTTATGATGCTCTTGTT+TGG | + | tig0021765:93442-93461 | Msa1393930:CDS | 35.0% | |
| ! | AGCTTATGATGCTCTTGTTT+GGG | + | tig0021765:93443-93462 | Msa1393930:CDS | 35.0% |
| ATTGTAAAACCAAACGGTGA+TGG | - | tig0021765:93611-93630 | None:intergenic | 35.0% | |
| TGGAATTAAGCATGCATGTT+TGG | + | tig0021765:93735-93754 | Msa1393930:intron | 35.0% | |
| CCATTCCTGATTTCTGTAAT+TGG | - | tig0021765:93836-93855 | None:intergenic | 35.0% | |
| CCAATTACAGAAATCAGGAA+TGG | + | tig0021765:93833-93852 | Msa1393930:intron | 35.0% | |
| ! | TACTTTCTGGAAATGACGTT+GGG | - | tig0021765:93899-93918 | None:intergenic | 35.0% |
| ! | TTACTTTCTGGAAATGACGT+TGG | - | tig0021765:93900-93919 | None:intergenic | 35.0% |
| CGTCATTTCCAGAAAGTAAA+TGG | + | tig0021765:93901-93920 | Msa1393930:CDS | 35.0% | |
| TTCTTCAAGAATCTCTCTCA+AGG | + | tig0021765:93991-94010 | Msa1393930:CDS | 35.0% | |
| CCAAACCAAACAAACGAAAA+GGG | - | tig0021765:94078-94097 | None:intergenic | 35.0% | |
| ACCAAACCAAACAAACGAAA+AGG | - | tig0021765:94079-94098 | None:intergenic | 35.0% | |
| ! | GGTAGCTATATTGGTTAAAG+TGG | + | tig0021765:94269-94288 | Msa1393930:intron | 35.0% |
| CTCTATTTGCAAAAGGGATT+TGG | - | tig0021765:94482-94501 | None:intergenic | 35.0% | |
| GTTGAGCTCTATTTGCAAAA+GGG | - | tig0021765:94488-94507 | None:intergenic | 35.0% | |
| TGTTGAGCTCTATTTGCAAA+AGG | - | tig0021765:94489-94508 | None:intergenic | 35.0% | |
| GCAAAAGAGATGAAAAACAG+AGG | - | tig0021765:94682-94701 | None:intergenic | 35.0% | |
| TTGGGTCAGAAAAAATTCTG+AGG | - | tig0021765:94719-94738 | None:intergenic | 35.0% | |
| !! | GTTTCGGTTTGTGATTTTTC+AGG | + | tig0021765:94741-94760 | Msa1393930:intron | 35.0% |
| CTACCAAATGTGATATCAGA+GGG | + | tig0021765:95115-95134 | Msa1393930:intron | 35.0% | |
| ATACCCTCTGATATCACATT+TGG | - | tig0021765:95121-95140 | None:intergenic | 35.0% | |
| TACAATTGTTCGCAAAACGA+TGG | + | tig0021765:95238-95257 | Msa1393930:CDS | 35.0% | |
| CTTGTAGAATTTCTCCTTCT+TGG | - | tig0021765:95274-95293 | None:intergenic | 35.0% | |
| GAAGGAGAAATTCTACAAGA+TGG | + | tig0021765:95275-95294 | Msa1393930:CDS | 35.0% | |
| AGTTGCAGTCATTTACTTCA+GGG | + | tig0021765:95420-95439 | Msa1393930:CDS | 35.0% | |
| ! | GATTCTGAAGGATAATCAAC+TGG | - | tig0021765:95457-95476 | None:intergenic | 35.0% |
| TATCCTTCAGAATCAGTAAG+TGG | + | tig0021765:95463-95482 | Msa1393930:intron | 35.0% | |
| ! | ATTGCGCTTTTACATCGTAA+AGG | + | tig0021765:95517-95536 | Msa1393930:intron | 35.0% |
| ATCATACCAGGTAATTCAGT+GGG | - | tig0021765:95597-95616 | None:intergenic | 35.0% | |
| CCAACAGAACAAAAATAAGG+TGG | - | tig0021765:95676-95695 | None:intergenic | 35.0% | |
| !!! | CCACCTTATTTTTGTTCTGT+TGG | + | tig0021765:95673-95692 | Msa1393930:intron | 35.0% |
| !!! | AACTATTTTGAGGTCCAAAC+TGG | - | tig0021765:95775-95794 | None:intergenic | 35.0% |
| GAACTCATTGTCAGGATAAA+AGG | - | tig0021765:96027-96046 | None:intergenic | 35.0% | |
| GCATAACTTACTCAATATGC+AGG | + | tig0021765:96065-96084 | Msa1393930:intron | 35.0% | |
| ACTTACTCAATATGCAGGAA+TGG | + | tig0021765:96070-96089 | Msa1393930:intron | 35.0% | |
| CCCTTCAATATCGTATCATT+TGG | + | tig0021765:96134-96153 | Msa1393930:CDS | 35.0% | |
| AAGTTCCTGTTGAATCTTCT+TGG | - | tig0021765:96166-96185 | None:intergenic | 35.0% | |
| AGAACATAAGATCCAGAAGA+AGG | - | tig0021765:96351-96370 | None:intergenic | 35.0% | |
| CAAATAAGTAAGGCATGGAT+TGG | - | tig0021765:96374-96393 | None:intergenic | 35.0% | |
| CCAATCAAATCATAAATGGC+TGG | - | tig0021765:96419-96438 | None:intergenic | 35.0% | |
| CCAGCCATTTATGATTTGAT+TGG | + | tig0021765:96416-96435 | Msa1393930:intron | 35.0% | |
| TCGTTAATAACTGAAACGGA+AGG | + | tig0021765:96564-96583 | Msa1393930:intron | 35.0% | |
| AATAACTGAAACGGAAGGTT+TGG | + | tig0021765:96569-96588 | Msa1393930:intron | 35.0% | |
| ATTCAAAACTCTTCCTAGAG+AGG | + | tig0021765:96755-96774 | Msa1393930:intron | 35.0% | |
| AATTCAACTCAATCCTCTCT+AGG | - | tig0021765:96771-96790 | None:intergenic | 35.0% | |
| AAGTATGAGTGTAGTTCCAA+GGG | - | tig0021765:96976-96995 | None:intergenic | 35.0% | |
| ! | TTTCTTAGATGAAAGTGCGA+GGG | - | tig0021765:97074-97093 | None:intergenic | 35.0% |
| !! | TTTTCTTAGATGAAAGTGCG+AGG | - | tig0021765:97075-97094 | None:intergenic | 35.0% |
| !!! | TTGACCATAGTTTGCTTTTC+TGG | + | tig0021765:97122-97141 | Msa1393930:intron | 35.0% |
| TTGACCAGAAAAGCAAACTA+TGG | - | tig0021765:97129-97148 | None:intergenic | 35.0% | |
| !!! | CTGCTTACAGTTTTGATTCA+AGG | - | tig0021765:97167-97186 | None:intergenic | 35.0% |
| CTTGAATCAAAACTGTAAGC+AGG | + | tig0021765:97165-97184 | Msa1393930:intron | 35.0% | |
| !!! | CGATATCGTCTTTGTTTTCA+AGG | - | tig0021765:97193-97212 | None:intergenic | 35.0% |
| ATATTTATGGTGAAGCAGTG+CGG | + | tig0021765:97421-97440 | Msa1393930:CDS | 35.0% | |
| ! | CCGTTTTCTGCAATTTTATG+AGG | - | tig0021765:97452-97471 | None:intergenic | 35.0% |
| !! | AAAACTGCAGCAGAAGTATT+TGG | - | tig0021765:97519-97538 | None:intergenic | 35.0% |
| ! | TTTTGATGCGTAATGGTTGT+TGG | + | tig0021765:97535-97554 | Msa1393930:CDS | 35.0% |
| !! | AAATATCCCAAGTTCTGAGA+CGG | - | tig0021765:97574-97593 | None:intergenic | 35.0% |
| GACTTGAATTTGCAGGAATA+AGG | + | tig0021765:97695-97714 | Msa1393930:intron | 35.0% | |
| GAATTTGCAGGAATAAGGAT+AGG | + | tig0021765:97700-97719 | Msa1393930:intron | 35.0% | |
| GTTGTCGTGAATAATCAAAG+TGG | + | tig0021765:97723-97742 | Msa1393930:CDS | 35.0% | |
| AGAGGCAGACAAATATAAAC+AGG | - | tig0021765:97906-97925 | None:intergenic | 35.0% | |
| GCAAAAAATTGAAAGAAGGG+AGG | + | tig0021765:97926-97945 | Msa1393930:three_prime_UTR | 35.0% | |
| GTAACTATACAACACACCAT+GGG | - | tig0021765:97975-97994 | None:intergenic | 35.0% | |
| TGTAACTATACAACACACCA+TGG | - | tig0021765:97976-97995 | None:intergenic | 35.0% | |
| CGATACGATGTTGAAGCAAT+AGG | + | tig0021765:93135-93154 | Msa1393930:CDS | 40.0% | |
| GGAGGAATGTATTTGGACAA+AGG | - | tig0021765:93213-93232 | None:intergenic | 40.0% | |
| AGGAGAAGGAGGAATGTATT+TGG | - | tig0021765:93220-93239 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTGTGAGGAGGAGA+AGG | - | tig0021765:93234-93253 | None:intergenic | 40.0% |
| !!! | AGGTTGTTGTTTTTGTGAGG+AGG | - | tig0021765:93240-93259 | None:intergenic | 40.0% |
| TTCATCGCCATTAATGGTGA+TGG | - | tig0021765:93346-93365 | None:intergenic | 40.0% | |
| TAATCATCAGCGAATAGAGG+AGG | - | tig0021765:93390-93409 | None:intergenic | 40.0% | |
| GGTAAGATTTATCTCCCATG+AGG | - | tig0021765:93485-93504 | None:intergenic | 40.0% | |
| CATGGGAGATAAATCTTACC+AGG | + | tig0021765:93485-93504 | Msa1393930:CDS | 40.0% | |
| ! | TTAGTCCATGTTTCTATCCG+TGG | + | tig0021765:93695-93714 | Msa1393930:intron | 40.0% |
| AACTGTTGCAAAACTCACCA+CGG | - | tig0021765:93715-93734 | None:intergenic | 40.0% | |
| ! | TGGTGAGTTTTGCAACAGTT+TGG | + | tig0021765:93715-93734 | Msa1393930:intron | 40.0% |
| ACGTTGGGAATAATGCAAAC+GGG | - | tig0021765:93884-93903 | None:intergenic | 40.0% | |
| GACGTTGGGAATAATGCAAA+CGG | - | tig0021765:93885-93904 | None:intergenic | 40.0% | |
| GCTTGCTTCCATTTACTTTC+TGG | - | tig0021765:93912-93931 | None:intergenic | 40.0% | |
| ATGGAAGCAAGCTTCTGATT+TGG | + | tig0021765:93920-93939 | Msa1393930:CDS | 40.0% | |
| ! | GTTGACCGTGTTAGTTTAGA+TGG | + | tig0021765:93963-93982 | Msa1393930:CDS | 40.0% |
| ! | CCCTTTTCGTTTGTTTGGTT+TGG | + | tig0021765:94075-94094 | Msa1393930:intron | 40.0% |
| TCAATCCAGAACTAAGCAAG+TGG | + | tig0021765:94181-94200 | Msa1393930:intron | 40.0% | |
| TTTGTTGAGCTGTAGCATCT+TGG | - | tig0021765:94240-94259 | None:intergenic | 40.0% | |
| GCTACAGCTCAACAAAAAAG+AGG | + | tig0021765:94244-94263 | Msa1393930:CDS | 40.0% | |
| CAGCTCAACAAAAAAGAGGT+CGG | + | tig0021765:94248-94267 | Msa1393930:intron | 40.0% | |
| AAAGAGGTCGGTAGCTATAT+TGG | + | tig0021765:94260-94279 | Msa1393930:intron | 40.0% | |
| CTCTTGTCACTCAACTTCAT+AGG | + | tig0021765:94539-94558 | Msa1393930:CDS | 40.0% | |
| AGGTACATACTTTCTTGCCA+TGG | + | tig0021765:94761-94780 | Msa1393930:intron | 40.0% | |
| TCTTGCCATGGAAAATTGCT+TGG | + | tig0021765:94773-94792 | Msa1393930:CDS | 40.0% | |
| ! | ATTCTGGCTGACAGCATTAT+TGG | - | tig0021765:94822-94841 | None:intergenic | 40.0% |
| ! | TTGTTTCTCGGATCTAACCT+GGG | - | tig0021765:94884-94903 | None:intergenic | 40.0% |
| ! | TTTGTTTCTCGGATCTAACC+TGG | - | tig0021765:94885-94904 | None:intergenic | 40.0% |
| CAGGGCTATCATTATGATTG+TGG | + | tig0021765:94972-94991 | Msa1393930:intron | 40.0% | |
| GAACAGCAGAAAGAAAATGC+TGG | - | tig0021765:95026-95045 | None:intergenic | 40.0% | |
| GCTACCAAATGTGATATCAG+AGG | + | tig0021765:95114-95133 | Msa1393930:intron | 40.0% | |
| GGAACACTTTCTGTGTATGT+AGG | + | tig0021765:95296-95315 | Msa1393930:intron | 40.0% | |
| CAGTTGCAGTCATTTACTTC+AGG | + | tig0021765:95419-95438 | Msa1393930:CDS | 40.0% | |
| GATCATACCAGGTAATTCAG+TGG | - | tig0021765:95598-95617 | None:intergenic | 40.0% | |
| TTGGTCACAAAGATCATACC+AGG | - | tig0021765:95609-95628 | None:intergenic | 40.0% | |
| ! | ACAGCAGTCAGTTCTTCTTT+TGG | - | tig0021765:95628-95647 | None:intergenic | 40.0% |
| AGCAATGAGAACTCATTGTC+AGG | - | tig0021765:96035-96054 | None:intergenic | 40.0% | |
| AGTTCTCATTGCTCATGCTT+TGG | + | tig0021765:96042-96061 | Msa1393930:intron | 40.0% | |
| GTTCTCATTGCTCATGCTTT+GGG | + | tig0021765:96043-96062 | Msa1393930:intron | 40.0% | |
| ! | GAGGGCTTTGATAAAAACGT+AGG | + | tig0021765:96598-96617 | Msa1393930:intron | 40.0% |
| ! | GGCTTTGATAAAAACGTAGG+TGG | + | tig0021765:96601-96620 | Msa1393930:intron | 40.0% |
| GTACAAGAAAAGGGGATAAC+CGG | - | tig0021765:96852-96871 | None:intergenic | 40.0% | |
| GAAGTATGAGTGTAGTTCCA+AGG | - | tig0021765:96977-96996 | None:intergenic | 40.0% | |
| AAAATGCGTGAATGCTTTGC+AGG | + | tig0021765:97215-97234 | Msa1393930:CDS | 40.0% | |
| TATTTATGGTGAAGCAGTGC+GGG | + | tig0021765:97422-97441 | Msa1393930:CDS | 40.0% | |
| CAGCTTACATACTTATGCAG+AGG | + | tig0021765:97487-97506 | Msa1393930:CDS | 40.0% | |
| GTCTCAGAACTTGGGATATT+TGG | + | tig0021765:97573-97592 | Msa1393930:CDS | 40.0% | |
| ATATCATCATCTGACGAAGG+TGG | + | tig0021765:97765-97784 | Msa1393930:CDS | 40.0% | |
| TATCATCATCTGACGAAGGT+GGG | + | tig0021765:97766-97785 | Msa1393930:CDS | 40.0% | |
| ! | TAGAGCACCTCTAACTTATC+TGG | + | tig0021765:97836-97855 | Msa1393930:three_prime_UTR | 40.0% |
| ! | AGAGCACCTCTAACTTATCT+GGG | + | tig0021765:97837-97856 | Msa1393930:three_prime_UTR | 40.0% |
| CAGGAGGCTCAAATGATAAT+GGG | - | tig0021765:97887-97906 | None:intergenic | 40.0% | |
| ACAGGAGGCTCAAATGATAA+TGG | - | tig0021765:97888-97907 | None:intergenic | 40.0% | |
| GGCAGACAAATATAAACAGG+AGG | - | tig0021765:97903-97922 | None:intergenic | 40.0% | |
| CGATGTTGAAGCAATAGGCA+TGG | + | tig0021765:93140-93159 | Msa1393930:CDS | 45.0% | |
| ! | TTTTTGTGAGGAGGAGAAGG+AGG | - | tig0021765:93231-93250 | None:intergenic | 45.0% |
| ACACCTGCCATCACCATTAA+TGG | + | tig0021765:93336-93355 | Msa1393930:CDS | 45.0% | |
| AGAAGAAGGAGAAGAAGACC+TGG | - | tig0021765:93506-93525 | None:intergenic | 45.0% | |
| ACTCACCACGGATAGAAACA+TGG | - | tig0021765:93703-93722 | None:intergenic | 45.0% | |
| CAGAAATCAGGAATGGTTCC+TGG | + | tig0021765:93840-93859 | Msa1393930:intron | 45.0% | |
| CGTTGGGAATAATGCAAACG+GGG | - | tig0021765:93883-93902 | None:intergenic | 45.0% | |
| ! | GGTCACCCTTTTCGTTTGTT+TGG | + | tig0021765:94070-94089 | Msa1393930:intron | 45.0% |
| TTCGTCCACTTGCTTAGTTC+TGG | - | tig0021765:94189-94208 | None:intergenic | 45.0% | |
| ! | CCAGACCAAGCAATTTTCCA+TGG | - | tig0021765:94781-94800 | None:intergenic | 45.0% |
| CCATGGAAAATTGCTTGGTC+TGG | + | tig0021765:94778-94797 | Msa1393930:CDS | 45.0% | |
| GCTTGGTCTGGATTCAGAAA+AGG | + | tig0021765:94790-94809 | Msa1393930:CDS | 45.0% | |
| GGAGTGAGTATAATAACCCC+AGG | + | tig0021765:94864-94883 | Msa1393930:CDS | 45.0% | |
| TGTTTCTCGGATCTAACCTG+GGG | - | tig0021765:94883-94902 | None:intergenic | 45.0% | |
| !! | TCCTTAGCTTTGAACACGCA+TGG | + | tig0021765:95212-95231 | Msa1393930:CDS | 45.0% |
| ACCATGCGTGTTCAAAGCTA+AGG | - | tig0021765:95216-95235 | None:intergenic | 45.0% | |
| ATGGCAGAAGTTGACCAAGA+AGG | + | tig0021765:95257-95276 | Msa1393930:CDS | 45.0% | |
| !! | TGGCCACTTACTGATTCTGA+AGG | - | tig0021765:95469-95488 | None:intergenic | 45.0% |
| GGTTAACCCACTGAATTACC+TGG | + | tig0021765:95588-95607 | Msa1393930:intron | 45.0% | |
| ATATGCAGGAATGGAGAGCT+AGG | + | tig0021765:96079-96098 | Msa1393930:intron | 45.0% | |
| TGGCACCAAGAAGATTCAAC+AGG | + | tig0021765:96158-96177 | Msa1393930:CDS | 45.0% | |
| AGATACCTCTCAAGAACACC+TGG | - | tig0021765:96195-96214 | None:intergenic | 45.0% | |
| ! | CAAGCAGAAAAGCATAGGGT+CGG | - | tig0021765:96523-96542 | None:intergenic | 45.0% |
| ! | TGGCCAAGCAGAAAAGCATA+GGG | - | tig0021765:96527-96546 | None:intergenic | 45.0% |
| ! | ACGGAAGGTTTGGAATAGTG+AGG | + | tig0021765:96579-96598 | Msa1393930:intron | 45.0% |
| ! | CGGAAGGTTTGGAATAGTGA+GGG | + | tig0021765:96580-96599 | Msa1393930:intron | 45.0% |
| ACTGTGGAGTTTGGATGACT+CGG | + | tig0021765:97238-97257 | Msa1393930:CDS | 45.0% | |
| !! | GCTGCAGTTTTGATGCGTAA+TGG | + | tig0021765:97528-97547 | Msa1393930:CDS | 45.0% |
| CGTAATGCTTAACATCCGCT+GGG | + | tig0021765:97673-97692 | Msa1393930:intron | 45.0% | |
| ATCATCATCTGACGAAGGTG+GGG | + | tig0021765:97767-97786 | Msa1393930:CDS | 45.0% | |
| !! | TCGCCATTAATGGTGATGGC+AGG | - | tig0021765:93342-93361 | None:intergenic | 50.0% |
| TCATCAGCGAATAGAGGAGG+AGG | - | tig0021765:93387-93406 | None:intergenic | 50.0% | |
| CTTGTTTGGGCCTCTCTTCA+CGG | + | tig0021765:93456-93475 | Msa1393930:CDS | 50.0% | |
| TCTCTTCACGGTCTCCTCAT+GGG | + | tig0021765:93468-93487 | Msa1393930:CDS | 50.0% | |
| !! | ACCAAACGGTGATGGAGACA+TGG | - | tig0021765:93603-93622 | None:intergenic | 50.0% |
| ATCAGGAATGGTTCCTGGTG+TGG | + | tig0021765:93845-93864 | Msa1393930:CDS | 50.0% | |
| TCAGGAATGGTTCCTGGTGT+GGG | + | tig0021765:93846-93865 | Msa1393930:CDS | 50.0% | |
| TGGCTGACAGCATTATTGGC+AGG | - | tig0021765:94818-94837 | None:intergenic | 50.0% | |
| ! | CTCACTCCAAGCTTTAGCCA+AGG | - | tig0021765:94852-94871 | None:intergenic | 50.0% |
| GCAGTCATTTACTTCAGGGC+TGG | + | tig0021765:95424-95443 | Msa1393930:CDS | 50.0% | |
| ! | GTTGATTGGTCGGTACAGCT+TGG | + | tig0021765:95818-95837 | Msa1393930:intron | 50.0% |
| ATGGAGAGCTAGGCTACTGA+TGG | + | tig0021765:96089-96108 | Msa1393930:CDS | 50.0% | |
| CAACAGGAACTTGCAAAGCC+AGG | + | tig0021765:96174-96193 | Msa1393930:CDS | 50.0% | |
| CAAAGCCAGGTGTTCTTGAG+AGG | + | tig0021765:96187-96206 | Msa1393930:CDS | 50.0% | |
| GAAGTGAGATCGCCTTCTTC+TGG | + | tig0021765:96336-96355 | Msa1393930:intron | 50.0% | |
| ! | CGACCCTATGCTTTTCTGCT+TGG | + | tig0021765:96521-96540 | Msa1393930:intron | 50.0% |
| ! | CTGGCCAAGCAGAAAAGCAT+AGG | - | tig0021765:96528-96547 | None:intergenic | 50.0% |
| ! | CTTTTCTGCTTGGCCAGTAG+TGG | + | tig0021765:96531-96550 | Msa1393930:intron | 50.0% |
| CGATGCATTCTTGCCACTAC+TGG | - | tig0021765:96547-96566 | None:intergenic | 50.0% | |
| GTGAATGCTTTGCAGGACTG+TGG | + | tig0021765:97222-97241 | Msa1393930:CDS | 50.0% | |
| CTTTGCAGGACTGTGGAGTT+TGG | + | tig0021765:97229-97248 | Msa1393930:CDS | 50.0% | |
| GTAATGAAGCCCCAGAGAGA+AGG | + | tig0021765:97299-97318 | Msa1393930:CDS | 50.0% | |
| AGTACCTCCTCCTTCTCTCT+GGG | - | tig0021765:97312-97331 | None:intergenic | 50.0% | |
| TAGTACCTCCTCCTTCTCTC+TGG | - | tig0021765:97313-97332 | None:intergenic | 50.0% | |
| GCGTAATGGTTGTTGGCACA+AGG | + | tig0021765:97542-97561 | Msa1393930:CDS | 50.0% | |
| GCGTAATGCTTAACATCCGC+TGG | + | tig0021765:97672-97691 | Msa1393930:intron | 50.0% | |
| CCTGCAAATTCAAGTCCCAG+CGG | - | tig0021765:97691-97710 | None:intergenic | 50.0% | |
| ! | GAGGTGCTCTACATCAAGTG+AGG | - | tig0021765:97827-97846 | None:intergenic | 50.0% |
| TCAGCGAATAGAGGAGGAGG+AGG | - | tig0021765:93384-93403 | None:intergenic | 55.0% | |
| CATGAGGAGACCGTGAAGAG+AGG | - | tig0021765:93469-93488 | None:intergenic | 55.0% | |
| CTCTCTTCACGGTCTCCTCA+TGG | + | tig0021765:93467-93486 | Msa1393930:CDS | 55.0% | |
| GCCATGTCTCCATCACCGTT+TGG | + | tig0021765:93599-93618 | Msa1393930:intron | 55.0% | |
| GCATGCATCAATCCCACACC+AGG | - | tig0021765:93861-93880 | None:intergenic | 55.0% | |
| ! | CCAAGCTTTAGCCAAGGCCT+CGG | - | tig0021765:94846-94865 | None:intergenic | 55.0% |
| ATGAAGCCCCAGAGAGAAGG+AGG | + | tig0021765:97302-97321 | Msa1393930:CDS | 55.0% | |
| GTACCTCCTCCTTCTCTCTG+GGG | - | tig0021765:97311-97330 | None:intergenic | 55.0% | |
| ACCACGCCGTCTCAGAACTT+GGG | + | tig0021765:97565-97584 | Msa1393930:CDS | 55.0% | |
| CCGCTGGGACTTGAATTTGC+AGG | + | tig0021765:97688-97707 | Msa1393930:intron | 55.0% | |
| ! | GCTGCTGCTGCTTCTGCTTC+TGG | + | tig0021765:93162-93181 | Msa1393930:CDS | 60.0% |
| TGCTGTCAGCCAGAATGCCG+AGG | + | tig0021765:94826-94845 | Msa1393930:CDS | 60.0% | |
| TAGCCAAGGCCTCGGCATTC+TGG | - | tig0021765:94838-94857 | None:intergenic | 60.0% | |
| CCGAGGCCTTGGCTAAAGCT+TGG | + | tig0021765:94843-94862 | Msa1393930:CDS | 60.0% | |
| AAGCCCCAGAGAGAAGGAGG+AGG | + | tig0021765:97305-97324 | Msa1393930:CDS | 60.0% | |
| GACCACGCCGTCTCAGAACT+TGG | + | tig0021765:97564-97583 | Msa1393930:CDS | 60.0% | |
| !! | TCCCAAGTTCTGAGACGGCG+TGG | - | tig0021765:97569-97588 | None:intergenic | 60.0% |
| CAGCCAGAATGCCGAGGCCT+TGG | + | tig0021765:94832-94851 | Msa1393930:CDS | 65.0% | |
| GACGAAGGTGGGGTTGCAGC+TGG | + | tig0021765:97777-97796 | Msa1393930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021765 | gene | 93102 | 98049 | 93102 | ID=Msa1393930;Name=Msa1393930 |
| tig0021765 | mRNA | 93102 | 98049 | 93102 | ID=Msa1393930-mRNA-1;Parent=Msa1393930;Name=Msa1393930-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.90|0.75|1|1|1|12|216|585 |
| tig0021765 | exon | 93102 | 93506 | 93102 | ID=Msa1393930-mRNA-1:exon:14086;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 93843 | 94012 | 93843 | ID=Msa1393930-mRNA-1:exon:14087;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 94190 | 94265 | 94190 | ID=Msa1393930-mRNA-1:exon:14088;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 94430 | 94560 | 94430 | ID=Msa1393930-mRNA-1:exon:14089;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 94763 | 94885 | 94763 | ID=Msa1393930-mRNA-1:exon:14090;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 94975 | 95072 | 94975 | ID=Msa1393930-mRNA-1:exon:14091;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 95204 | 95309 | 95204 | ID=Msa1393930-mRNA-1:exon:14092;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 95408 | 95477 | 95408 | ID=Msa1393930-mRNA-1:exon:14093;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 96087 | 96208 | 96087 | ID=Msa1393930-mRNA-1:exon:14094;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 97187 | 97326 | 97187 | ID=Msa1393930-mRNA-1:exon:14095;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 97415 | 97607 | 97415 | ID=Msa1393930-mRNA-1:exon:14096;Parent=Msa1393930-mRNA-1 |
| tig0021765 | exon | 97710 | 98049 | 97710 | ID=Msa1393930-mRNA-1:exon:14097;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 93102 | 93506 | 93102 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 93843 | 94012 | 93843 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 94190 | 94265 | 94190 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 94430 | 94560 | 94430 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 94763 | 94885 | 94763 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 94975 | 95072 | 94975 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 95204 | 95309 | 95204 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 95408 | 95477 | 95408 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 96087 | 96208 | 96087 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 97187 | 97326 | 97187 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 97415 | 97607 | 97415 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | CDS | 97710 | 97833 | 97710 | ID=Msa1393930-mRNA-1:cds;Parent=Msa1393930-mRNA-1 |
| tig0021765 | three_prime_UTR | 97834 | 98049 | 97834 | ID=Msa1393930-mRNA-1:three_prime_utr;Parent=Msa1393930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
