AlfalfaGEDB | Msa0455830

M. sativa cultivar zhongmu-4 / Msa0455830

KEGG: K05894
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0008150 GO:0008152 GO:0009611 GO:0016491 GO:0016627 GO:0016628 GO:0016629 GO:0044464 GO:0050896 GO:0055114
PFAM: PF00724.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0455830	XP_003610767.1	96.226	371	14	0	1	371	1	371	0.0	746

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0455830	sp\|B9FSC8\|OPR11_ORYSJ	76.648	364	83	1	7	370	2	363	0.0	602

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0455830	G7K3S2	96.226	371	14	0	1	371	1	371	0.0	746

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037720	Msa0455830	0.817297	3.548232e-52	-8.615850e-47
Msa0083240	Msa0455830	0.803801	2.930675e-49	-8.615850e-47
Msa0128030	Msa0455830	0.811490	6.822562e-51	-8.615850e-47
Msa0129640	Msa0455830	0.844345	8.009137e-59	-8.615850e-47
Msa0194370	Msa0455830	-0.801118	1.046827e-48	-8.615850e-47
Msa0374290	Msa0455830	0.808238	3.417210e-50	-8.615850e-47
Msa0381470	Msa0455830	0.816973	4.195555e-52	-8.615850e-47
Msa0387300	Msa0455830	0.834424	3.020794e-56	-8.615850e-47
Msa0414720	Msa0455830	0.805610	1.228761e-49	-8.615850e-47
Msa0416040	Msa0455830	0.808724	2.691032e-50	-8.615850e-47
Msa0434140	Msa0455830	0.816192	6.275532e-52	-8.615850e-47
Msa0455830	Msa0459630	0.813985	1.939218e-51	-8.615850e-47
Msa0455830	Msa0463890	0.819978	8.740989e-53	-8.615850e-47
Msa0455830	Msa0477660	0.826170	3.142239e-54	-8.615850e-47
Msa0455830	Msa0480550	0.802073	6.670037e-49	-8.615850e-47
Msa0455830	Msa0489070	0.812112	4.993728e-51	-8.615850e-47
Msa0455830	Msa0508160	0.801763	7.723859e-49	-8.615850e-47
Msa0455830	Msa0509420	0.809714	1.650929e-50	-8.615850e-47
Msa0455830	Msa0519910	0.800877	1.172724e-48	-8.615850e-47
Msa0455830	Msa0521720	0.825025	5.869236e-54	-8.615850e-47
Msa0455830	Msa0622070	0.814915	1.207771e-51	-8.615850e-47
Msa0455830	Msa0652580	0.803150	3.998764e-49	-8.615850e-47
Msa0455830	Msa0652700	0.811141	8.118952e-51	-8.615850e-47
Msa0455830	Msa0738400	0.804240	2.375253e-49	-8.615850e-47
Msa0455830	Msa0744560	0.805201	1.496254e-49	-8.615850e-47
Msa0455830	Msa0749500	0.961076	2.766059e-119	-8.615850e-47
Msa0455830	Msa0749510	0.954665	1.770015e-112	-8.615850e-47
Msa0455830	Msa0753410	0.801816	7.533193e-49	-8.615850e-47
Msa0455830	Msa0793910	0.951710	1.149684e-109	-8.615850e-47
Msa0455830	Msa0826360	0.801239	9.890302e-49	-8.615850e-47
Msa0455830	Msa0826370	0.812594	3.920062e-51	-8.615850e-47
Msa0455830	Msa0831430	0.957458	2.587415e-115	-8.615850e-47
Msa0455830	Msa0865810	0.802945	4.408267e-49	-8.615850e-47
Msa0455830	Msa0876790	0.801355	9.364815e-49	-8.615850e-47
Msa0455830	Msa0979050	0.857101	2.052605e-62	-8.615850e-47
Msa0455830	Msa0986160	0.813663	2.283631e-51	-8.615850e-47
Msa0455830	Msa1039650	0.856133	3.953216e-62	-8.615850e-47
Msa0455830	Msa1128720	0.804079	2.566475e-49	-8.615850e-47
Msa0455830	Msa1157200	0.827829	1.260539e-54	-8.615850e-47
Msa0455830	Msa1304980	0.830346	3.092280e-55	-8.615850e-47
Msa0455830	Msa1344220	0.812237	4.691459e-51	-8.615850e-47
Msa0455830	Msa1393930	0.801749	7.774668e-49	-8.615850e-47
Msa0455830	Msa1412410	0.834339	3.174456e-56	-8.615850e-47
Msa0455830	Msa1427860	0.842339	2.747462e-58	-8.615850e-47
Msa0455830	Msa1459930	0.800589	1.342663e-48	-8.615850e-47
Msa0267230	Msa0455830	0.824587	7.446276e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0455830	MtrunA17_Chr5g0394861	96.226	371	14	0	1	371	1	371	0.0	746
Msa0455830	MtrunA17_Chr5g0394891	91.375	371	30	1	1	371	1	369	0.0	709
Msa0455830	MtrunA17_Chr5g0394841	87.601	371	46	0	1	371	1	371	0.0	691
Msa0455830	MtrunA17_Chr5g0394751	85.559	367	45	3	5	371	1	359	0.0	644
Msa0455830	MtrunA17_Chr5g0394811	82.740	365	61	1	7	371	116	478	0.0	640
Msa0455830	MtrunA17_Chr5g0394811	61.074	149	46	4	18	157	1	146	5.68e-49	171
Msa0455830	MtrunA17_Chr5g0394771	83.562	365	52	3	7	371	35	391	0.0	630
Msa0455830	MtrunA17_Chr5g0395841	80.000	370	72	1	1	370	3	370	0.0	625
Msa0455830	MtrunA17_Chr3g0144001	69.780	364	104	2	8	371	6	363	0.0	535
Msa0455830	MtrunA17_Chr4g0070561	53.083	373	158	5	12	370	19	388	1.76e-139	402
Msa0455830	MtrunA17_Chr5g0394791	69.347	199	53	2	4	202	3	193	1.23e-92	275
Msa0455830	MtrunA17_Chr5g0394801	65.128	195	41	1	169	363	18	185	1.32e-83	254
Msa0455830	MtrunA17_Chr3g0130471	70.909	55	13	1	196	250	1	52	2.03e-18	79.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0455830	AT1G76690.1	76.011	371	87	1	1	371	3	371	0.0	601
Msa0455830	AT1G76680.1	76.309	363	84	1	9	371	9	369	0.0	590
Msa0455830	AT1G76680.2	71.392	388	84	2	9	371	9	394	0.0	577
Msa0455830	AT1G09400.1	68.976	332	95	2	18	349	1	324	1.33e-174	489
Msa0455830	AT1G09400.2	70.741	270	73	1	80	349	2	265	5.93e-144	409
Msa0455830	AT2G06050.2	51.194	377	163	5	12	370	12	385	3.58e-135	391
Msa0455830	AT2G06050.1	51.194	377	163	5	12	370	12	385	3.58e-135	391
Msa0455830	AT2G06050.3	51.194	377	163	5	12	370	12	385	3.58e-135	391
Msa0455830	AT1G17990.1	69.615	260	72	3	9	268	6	258	1.14e-133	383
Msa0455830	AT1G18020.1	69.615	260	72	3	9	268	6	258	1.14e-133	383
Msa0455830	AT1G17990.2	66.538	260	72	4	9	268	6	250	6.83e-125	360

Find 122 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAATCTCTTTGGCAAATC+TGG	0.201994	3_3:+48875555	None:intergenic
GTTGGAAGAGTTTCTGATTC+TGG	0.251518	3_3:-48876487	Msa0455830:intron
TAACGAATTGGGACTTTATA+TGG	0.259709	3_3:-48875802	Msa0455830:CDS
GCTTACTCTTACTAACTCTT+TGG	0.280591	3_3:-48875303	Msa0455830:three_prime_UTR
ATCACGTAATCAAGTGAAAA+TGG	0.288181	3_3:-48876921	Msa0455830:exon
TACATTTCTGATCCAGTTCT+AGG	0.288195	3_3:-48875492	Msa0455830:CDS
ATTTCATTTCAGAGTTGTTT+TGG	0.300909	3_3:-48876755	Msa0455830:intron
AAAGGCACTTTCATGGTTGC+AGG	0.311740	3_3:-48875663	Msa0455830:CDS
CTCCTCTGAACAAGTATAAC+AGG	0.317873	3_3:-48875524	Msa0455830:CDS
ATCCAGACACGCCAGGTATA+TGG	0.350535	3_3:-48876594	Msa0455830:CDS
GTCCATATACCTGGCGTGTC+TGG	0.353329	3_3:+48876592	None:intergenic
GTCAATGCCCTCAATAACTA+TGG	0.376057	3_3:-48875780	Msa0455830:CDS
TGGTATTCTTTACTGTCATA+TGG	0.384154	3_3:-48875760	Msa0455830:CDS
TCAATGCCATAGCTGAAAAC+AGG	0.384447	3_3:-48875617	Msa0455830:CDS
AGACTCCAACCCTAACGAAT+TGG	0.384935	3_3:-48875814	Msa0455830:CDS
GGCCTTCAAAGGCACTTTCA+TGG	0.385984	3_3:-48875670	Msa0455830:CDS
AAACCATTACTTCGAATTTG+TGG	0.394649	3_3:+48876303	None:intergenic
CCAGTTTCTTCATTCAAGAA+AGG	0.397020	3_3:+48875455	None:intergenic
ATATAAAGTCCCAATTCGTT+AGG	0.406105	3_3:+48875804	None:intergenic
GCATCAAGTGCAAATCTCTT+TGG	0.407422	3_3:+48875546	None:intergenic
TCGAATTTGCCCATGTTGTA+AGG	0.413517	3_3:+48876860	None:intergenic
GAGATAGGAGCTGATAAAGT+TGG	0.416753	3_3:-48875876	Msa0455830:CDS
GACTCCAACCCTAACGAATT+GGG	0.419325	3_3:-48875813	Msa0455830:CDS
GAACCGTTGTCGGTTTGCTT+TGG	0.420051	3_3:-48875922	Msa0455830:CDS
AGGGCAGACCTTGTTGTCTA+TGG	0.429742	3_3:-48875597	Msa0455830:CDS
CCTTTCTTGAATGAAGAAAC+TGG	0.431717	3_3:-48875455	Msa0455830:exon
TCATCTGTCCTTAGCCGCCT+TGG	0.434930	3_3:+48876258	None:intergenic
AACCATGAAAGTGCCTTTGA+AGG	0.438354	3_3:+48875668	None:intergenic
GTGCAAATTGCAGGATTTGA+TGG	0.444981	3_3:-48876038	Msa0455830:intron
GCAAATTCGATCTATCTCAT+AGG	0.451023	3_3:-48876847	Msa0455830:intron
AAAGAATACCATAGTTATTG+AGG	0.451789	3_3:+48875772	None:intergenic
CAGTTTCTTCATTCAAGAAA+GGG	0.456188	3_3:+48875456	None:intergenic
CTAAAGAGCACGTCGAGGCT+TGG	0.460997	3_3:-48876570	Msa0455830:CDS
GCATGAACAGCATCCACAAT+GGG	0.464445	3_3:+48876544	None:intergenic
GACTTATCTGTAGATGATAT+TGG	0.464557	3_3:+48876333	None:intergenic
AATGACAGAACAGATGAATA+TGG	0.470052	3_3:-48875957	Msa0455830:CDS
CATTCTGCATATTCTGCAAA+AGG	0.473703	3_3:+48875840	None:intergenic
TTTGATGGGGTTGAAATCCA+TGG	0.479079	3_3:-48876023	Msa0455830:CDS
TAGTCAGTATAACCTAGAAC+TGG	0.480015	3_3:+48875480	None:intergenic
GTCAGAGACACCGGTAGCTT+CGG	0.483228	3_3:+48876630	None:intergenic
CAGCCTTGTGCCGATGAGAA+AGG	0.488883	3_3:-48875691	Msa0455830:CDS
GTTGAAATCCATGGGGCTCA+TGG	0.498562	3_3:-48876014	Msa0455830:CDS
GATATTGGTGCCTGTCCATT+CGG	0.502015	3_3:+48876348	None:intergenic
TAGAGGATAGCATGAGGTTG+TGG	0.502110	3_3:+48876697	None:intergenic
TGCAAATTGCAGGATTTGAT+GGG	0.502113	3_3:-48876037	Msa0455830:intron
TTATAGTGAAACTTAAGTAA+TGG	0.503053	3_3:+48876987	None:intergenic
CATTTACAAAATGTGTGAAT+GGG	0.503904	3_3:+48875278	None:intergenic
CAGAGAGCCACCGGCTCTAA+CGG	0.506975	3_3:-48876667	Msa0455830:CDS
ACACCACAAATTCGAAGTAA+TGG	0.507759	3_3:-48876306	Msa0455830:CDS
CTCACAAGACAAAGATCCTA+TGG	0.508545	3_3:-48876727	Msa0455830:CDS
CGTAATCAAGTGAAAATGGC+TGG	0.509462	3_3:-48876917	Msa0455830:exon
CCATTTACAAAATGTGTGAA+TGG	0.510823	3_3:+48875277	None:intergenic
ATGCCAAATCTGACAAAAGA+AGG	0.517640	3_3:+48876510	None:intergenic
GAAGCTGTTGCAAATGAGAT+AGG	0.518438	3_3:-48875891	Msa0455830:CDS
TTAGTAAGAGTAAGCTTGAG+AGG	0.520497	3_3:+48875311	None:intergenic
TATAAAGTCCCAATTCGTTA+GGG	0.522588	3_3:+48875805	None:intergenic
TGGCTCTCTGTGAATAATAG+AGG	0.529112	3_3:+48876680	None:intergenic
GATCCCTTGAGAACCGTTGT+CGG	0.529555	3_3:-48875932	Msa0455830:CDS
TTGATGGGGTTGAAATCCAT+GGG	0.529612	3_3:-48876022	Msa0455830:CDS
CTTTCATGAATTGTTCAAGT+AGG	0.530510	3_3:+48875988	None:intergenic
CAAACCGACAACGGTTCTCA+AGG	0.533263	3_3:+48875928	None:intergenic
TAGTGAGGAGATTCCACACT+TGG	0.535155	3_3:+48875421	None:intergenic
TCTGTCCTTAGCCGCCTTGG+TGG	0.535739	3_3:+48876261	None:intergenic
AAGTCCCAATTCGTTAGGGT+TGG	0.539732	3_3:+48875809	None:intergenic
TCACACCACCAAGGCGGCTA+AGG	0.540861	3_3:-48876266	Msa0455830:CDS
ACTTGCTGCTAGAAATGCTA+TGG	0.544349	3_3:-48876208	Msa0455830:CDS
GTGGATGCTGTTCATGCTAA+AGG	0.544472	3_3:-48876538	Msa0455830:CDS
AAGAATACCATAGTTATTGA+GGG	0.545950	3_3:+48875773	None:intergenic
GCTAGAAATGCTATGGAAGC+TGG	0.548470	3_3:-48876201	Msa0455830:intron
GTAAGGAGTAAGAAGAGGAA+TGG	0.554543	3_3:+48876877	None:intergenic
CAAGGGTATCCAGACACGCC+AGG	0.555989	3_3:-48876601	Msa0455830:CDS
GGTGTCTCTGACACCGCTCA+AGG	0.561959	3_3:-48876619	Msa0455830:CDS
AGTTTATCAGCCGAATGGAC+AGG	0.564367	3_3:-48876358	Msa0455830:CDS
GAGAAGACCTCCGTTAGAGC+CGG	0.566754	3_3:+48876657	None:intergenic
TCTTCTTACTCCTTACAACA+TGG	0.567126	3_3:-48876870	Msa0455830:CDS
CCTTTGAAGGCCTTTCTCAT+CGG	0.568654	3_3:+48875681	None:intergenic
GGAGGTTACGACCGACATGA+TGG	0.569456	3_3:-48875642	Msa0455830:CDS
CTTCTCATAACCGAAGCTAC+CGG	0.572746	3_3:-48876640	Msa0455830:CDS
AGGCCTTTCTCATCGGCACA+AGG	0.573077	3_3:+48875688	None:intergenic
TAGCAGAAAGCAATCTGCAA+GGG	0.577000	3_3:+48875384	None:intergenic
TATTATTCACAGAGAGCCAC+CGG	0.583608	3_3:-48876676	Msa0455830:CDS
TCAACAGTTTATCAGCCGAA+TGG	0.583793	3_3:-48876363	Msa0455830:intron
CCGATGAGAAAGGCCTTCAA+AGG	0.584601	3_3:-48875681	Msa0455830:CDS
TGCTCTTTAGTCCATATACC+TGG	0.585344	3_3:+48876583	None:intergenic
AGGTTGTGGAACGTTGCCAT+AGG	0.592868	3_3:+48876711	None:intergenic
GGCACTTTCATGGTTGCAGG+AGG	0.593746	3_3:-48875660	Msa0455830:CDS
GATAATGAACTTATTTAGTG+AGG	0.593789	3_3:+48875406	None:intergenic
TTTGCAGAATATGCAGAATG+TGG	0.598992	3_3:-48875837	Msa0455830:CDS
CTTCTTACTCCTTACAACAT+GGG	0.606470	3_3:-48876869	Msa0455830:CDS
AAGACCTCCGTTAGAGCCGG+TGG	0.607283	3_3:+48876660	None:intergenic
GAGGTTACGACCGACATGAT+GGG	0.607847	3_3:-48875641	Msa0455830:CDS
TAGGATCTTTGTCTTGTGAG+TGG	0.610235	3_3:+48876730	None:intergenic
AGTTTCTTCATTCAAGAAAG+GGG	0.611551	3_3:+48875457	None:intergenic
TCCCTGTTATACTTGTTCAG+AGG	0.614414	3_3:+48875522	None:intergenic
GTGTCTCTGACACCGCTCAA+GGG	0.616121	3_3:-48876618	Msa0455830:CDS
TAGTGAAACTTAAGTAATGG+CGG	0.617391	3_3:+48876990	None:intergenic
CGAGGCTTGGAAACCCATTG+TGG	0.618914	3_3:-48876557	Msa0455830:CDS
TCTCATCGGCACAAGGCTGT+CGG	0.619671	3_3:+48875695	None:intergenic
CTTCCAAAGCAAACCGACAA+CGG	0.620487	3_3:+48875919	None:intergenic
CAATGCCATAGCTGAAAACA+GGG	0.621098	3_3:-48875616	Msa0455830:CDS
TATTCTTTACTGTCATATGG+TGG	0.623581	3_3:-48875757	Msa0455830:CDS
GTAGGTAGCCATGAGCCCCA+TGG	0.625089	3_3:+48876006	None:intergenic
AAACCGACAACGGTTCTCAA+GGG	0.626011	3_3:+48875929	None:intergenic
AGCATGAACAGCATCCACAA+TGG	0.632785	3_3:+48876543	None:intergenic
TTGAGCGGTGTCAGAGACAC+CGG	0.633714	3_3:+48876621	None:intergenic
ATAGCAGAAAGCAATCTGCA+AGG	0.641986	3_3:+48875383	None:intergenic
ATTTACAAAATGTGTGAATG+GGG	0.642740	3_3:+48875279	None:intergenic
GAACCAAGAATGAAAACTGT+TGG	0.645257	3_3:-48875735	Msa0455830:CDS
GACAGAACAGATGAATATGG+TGG	0.647355	3_3:-48875954	Msa0455830:CDS
AGAGCCACCGGCTCTAACGG+AGG	0.647688	3_3:-48876664	Msa0455830:CDS
TGGCATTGATCCCATCATGT+CGG	0.655421	3_3:+48875631	None:intergenic
GCAAATTGCAGGATTTGATG+GGG	0.659323	3_3:-48876036	Msa0455830:intron
ATGTTGTAAGGAGTAAGAAG+AGG	0.659804	3_3:+48876872	None:intergenic
TCCTCTGAACAAGTATAACA+GGG	0.662663	3_3:-48875523	Msa0455830:CDS
ACAAACGACCATAGACAACA+AGG	0.681842	3_3:+48875589	None:intergenic
TTGCAAAATTCACACCACCA+AGG	0.704294	3_3:-48876275	Msa0455830:CDS
CGTGTCTGGATACCCTTGAG+CGG	0.705121	3_3:+48876606	None:intergenic
GGTGCTGTAGCATCCAAGTG+TGG	0.706367	3_3:-48875434	Msa0455830:three_prime_UTR
GAATAATAGAGGATAGCATG+AGG	0.726209	3_3:+48876691	None:intergenic
TGATGGGGTTGAAATCCATG+GGG	0.726824	3_3:-48876021	Msa0455830:CDS
CAAAATTCACACCACCAAGG+CGG	0.740755	3_3:-48876272	Msa0455830:CDS
ATGGACTAAAGAGCACGTCG+AGG	0.748737	3_3:-48876575	Msa0455830:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr3_3:48875956-48875975	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr3_3:48876945-48876964	None:intergenic	10.0%
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr3_3:48875956-48875975	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr3_3:48876945-48876964	None:intergenic	10.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr3_3:48875120-48875139	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr3_3:48875671-48875690	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr3_3:48875725-48875744	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr3_3:48875733-48875752	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr3_3:48876914-48876933	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr3_3:48876997-48877016	None:intergenic	20.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr3_3:48875120-48875139	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr3_3:48875671-48875690	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr3_3:48875725-48875744	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr3_3:48875733-48875752	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr3_3:48876914-48876933	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr3_3:48876997-48877016	None:intergenic	20.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr3_3:48875349-48875368	Msa0455830:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr3_3:48875726-48875745	None:intergenic	25.0%
!	AAGAATACCATAGTTATTGA+GGG	+	chr3_3:48876334-48876353	None:intergenic	25.0%
!	AAAGAATACCATAGTTATTG+AGG	+	chr3_3:48876335-48876354	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr3_3:48876701-48876720	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr3_3:48876828-48876847	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr3_3:48876829-48876848	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr3_3:48876964-48876983	Msa0455830:five_prime_UTR	25.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr3_3:48875349-48875368	Msa0455830:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr3_3:48875726-48875745	None:intergenic	25.0%
!	AAGAATACCATAGTTATTGA+GGG	+	chr3_3:48876334-48876353	None:intergenic	25.0%
!	AAAGAATACCATAGTTATTG+AGG	+	chr3_3:48876335-48876354	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr3_3:48876701-48876720	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr3_3:48876828-48876847	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr3_3:48876829-48876848	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr3_3:48876964-48876983	Msa0455830:five_prime_UTR	25.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr3_3:48875117-48875136	None:intergenic	30.0%
	ATCACGTAATCAAGTGAAAA+TGG	-	chr3_3:48875183-48875202	Msa0455830:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr3_3:48875774-48875793	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr3_3:48875804-48875823	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr3_3:48876003-48876022	Msa0455830:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr3_3:48876004-48876023	Msa0455830:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr3_3:48876044-48876063	Msa0455830:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr3_3:48876119-48876138	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr3_3:48876147-48876166	Msa0455830:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr3_3:48876302-48876321	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr3_3:48876303-48876322	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr3_3:48876302-48876321	Msa0455830:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr3_3:48876344-48876363	Msa0455830:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr3_3:48876347-48876366	Msa0455830:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr3_3:48876650-48876669	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr3_3:48876651-48876670	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr3_3:48876751-48876770	Msa0455830:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr3_3:48876830-48876849	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr3_3:48876827-48876846	Msa0455830:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr3_3:48876833-48876852	Msa0455830:intron	30.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr3_3:48875117-48875136	None:intergenic	30.0%
	ATCACGTAATCAAGTGAAAA+TGG	-	chr3_3:48875183-48875202	Msa0455830:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr3_3:48875774-48875793	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr3_3:48875804-48875823	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr3_3:48876003-48876022	Msa0455830:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr3_3:48876004-48876023	Msa0455830:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr3_3:48876044-48876063	Msa0455830:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr3_3:48876119-48876138	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr3_3:48876147-48876166	Msa0455830:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr3_3:48876302-48876321	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr3_3:48876303-48876322	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr3_3:48876302-48876321	Msa0455830:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr3_3:48876344-48876363	Msa0455830:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr3_3:48876347-48876366	Msa0455830:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr3_3:48876650-48876669	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr3_3:48876651-48876670	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr3_3:48876751-48876770	Msa0455830:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr3_3:48876830-48876849	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr3_3:48876827-48876846	Msa0455830:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr3_3:48876833-48876852	Msa0455830:intron	30.0%
	ATGTTGTAAGGAGTAAGAAG+AGG	+	chr3_3:48875235-48875254	None:intergenic	35.0%
	TCTTCTTACTCCTTACAACA+TGG	-	chr3_3:48875234-48875253	Msa0455830:three_prime_UTR	35.0%
	CTTCTTACTCCTTACAACAT+GGG	-	chr3_3:48875235-48875254	Msa0455830:three_prime_UTR	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr3_3:48875257-48875276	Msa0455830:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr3_3:48875416-48875435	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr3_3:48875591-48875610	Msa0455830:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr3_3:48875597-48875616	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr3_3:48875599-48875618	Msa0455830:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr3_3:48875798-48875817	Msa0455830:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr3_3:48876067-48876086	Msa0455830:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr3_3:48876267-48876286	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr3_3:48876267-48876286	Msa0455830:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr3_3:48876369-48876388	Msa0455830:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr3_3:48876375-48876394	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr3_3:48876581-48876600	Msa0455830:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr3_3:48876612-48876631	Msa0455830:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr3_3:48876627-48876646	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr3_3:48876652-48876671	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr3_3:48876649-48876668	Msa0455830:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr3_3:48876796-48876815	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr3_3:48876801-48876820	Msa0455830:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr3_3:48876832-48876851	Msa0455830:intron	35.0%
	ATGTTGTAAGGAGTAAGAAG+AGG	+	chr3_3:48875235-48875254	None:intergenic	35.0%
	TCTTCTTACTCCTTACAACA+TGG	-	chr3_3:48875234-48875253	Msa0455830:three_prime_UTR	35.0%
	CTTCTTACTCCTTACAACAT+GGG	-	chr3_3:48875235-48875254	Msa0455830:three_prime_UTR	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr3_3:48875257-48875276	Msa0455830:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr3_3:48875416-48875435	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr3_3:48875591-48875610	Msa0455830:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr3_3:48875597-48875616	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr3_3:48875599-48875618	Msa0455830:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr3_3:48875798-48875817	Msa0455830:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr3_3:48876067-48876086	Msa0455830:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr3_3:48876267-48876286	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr3_3:48876267-48876286	Msa0455830:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr3_3:48876369-48876388	Msa0455830:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr3_3:48876375-48876394	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr3_3:48876581-48876600	Msa0455830:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr3_3:48876612-48876631	Msa0455830:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr3_3:48876627-48876646	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr3_3:48876652-48876671	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr3_3:48876649-48876668	Msa0455830:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr3_3:48876796-48876815	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr3_3:48876801-48876820	Msa0455830:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr3_3:48876832-48876851	Msa0455830:intron	35.0%
	CGTAATCAAGTGAAAATGGC+TGG	-	chr3_3:48875187-48875206	Msa0455830:three_prime_UTR	40.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr3_3:48875230-48875249	None:intergenic	40.0%
	TCGAATTTGCCCATGTTGTA+AGG	+	chr3_3:48875247-48875266	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr3_3:48875377-48875396	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr3_3:48875377-48875396	Msa0455830:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr3_3:48875427-48875446	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr3_3:48875428-48875447	Msa0455830:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr3_3:48875524-48875543	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr3_3:48875617-48875636	Msa0455830:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr3_3:48875741-48875760	Msa0455830:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr3_3:48875829-48875848	Msa0455830:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr3_3:48875896-48875915	Msa0455830:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr3_3:48876066-48876085	Msa0455830:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr3_3:48876068-48876087	Msa0455830:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr3_3:48876081-48876100	Msa0455830:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr3_3:48876082-48876101	Msa0455830:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr3_3:48876150-48876169	Msa0455830:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr3_3:48876213-48876232	Msa0455830:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr3_3:48876228-48876247	Msa0455830:CDS	40.0%
	GTCAATGCCCTCAATAACTA+TGG	-	chr3_3:48876324-48876343	Msa0455830:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr3_3:48876439-48876458	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr3_3:48876487-48876506	Msa0455830:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr3_3:48876488-48876507	Msa0455830:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr3_3:48876518-48876537	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr3_3:48876552-48876571	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr3_3:48876561-48876580	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr3_3:48876580-48876599	Msa0455830:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr3_3:48876585-48876604	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr3_3:48876723-48876742	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr3_3:48876724-48876743	None:intergenic	40.0%
	CGTAATCAAGTGAAAATGGC+TGG	-	chr3_3:48875187-48875206	Msa0455830:three_prime_UTR	40.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr3_3:48875230-48875249	None:intergenic	40.0%
	TCGAATTTGCCCATGTTGTA+AGG	+	chr3_3:48875247-48875266	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr3_3:48875377-48875396	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr3_3:48875377-48875396	Msa0455830:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr3_3:48875427-48875446	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr3_3:48875428-48875447	Msa0455830:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr3_3:48875524-48875543	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr3_3:48875617-48875636	Msa0455830:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr3_3:48875741-48875760	Msa0455830:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr3_3:48875829-48875848	Msa0455830:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr3_3:48875896-48875915	Msa0455830:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr3_3:48876066-48876085	Msa0455830:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr3_3:48876068-48876087	Msa0455830:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr3_3:48876081-48876100	Msa0455830:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr3_3:48876082-48876101	Msa0455830:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr3_3:48876150-48876169	Msa0455830:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr3_3:48876213-48876232	Msa0455830:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr3_3:48876228-48876247	Msa0455830:CDS	40.0%
	GTCAATGCCCTCAATAACTA+TGG	-	chr3_3:48876324-48876343	Msa0455830:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr3_3:48876439-48876458	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr3_3:48876487-48876506	Msa0455830:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr3_3:48876488-48876507	Msa0455830:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr3_3:48876518-48876537	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr3_3:48876552-48876571	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr3_3:48876561-48876580	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr3_3:48876580-48876599	Msa0455830:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr3_3:48876585-48876604	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr3_3:48876723-48876742	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr3_3:48876724-48876743	None:intergenic	40.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr3_3:48875410-48875429	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr3_3:48875464-48875483	Msa0455830:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr3_3:48875563-48875582	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr3_3:48875564-48875583	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr3_3:48875566-48875585	Msa0455830:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr3_3:48875746-48875765	Msa0455830:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr3_3:48875759-48875778	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr3_3:48875832-48875851	Msa0455830:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr3_3:48875903-48875922	Msa0455830:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr3_3:48876011-48876030	Msa0455830:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr3_3:48876057-48876076	Msa0455830:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr3_3:48876083-48876102	Msa0455830:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr3_3:48876178-48876197	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr3_3:48876188-48876207	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr3_3:48876290-48876309	Msa0455830:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr3_3:48876291-48876310	Msa0455830:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr3_3:48876298-48876317	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr3_3:48876426-48876445	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr3_3:48876441-48876460	Msa0455830:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr3_3:48876476-48876495	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr3_3:48876686-48876705	None:intergenic	45.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr3_3:48875410-48875429	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr3_3:48875464-48875483	Msa0455830:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr3_3:48875563-48875582	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr3_3:48875564-48875583	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr3_3:48875566-48875585	Msa0455830:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr3_3:48875746-48875765	Msa0455830:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr3_3:48875759-48875778	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr3_3:48875832-48875851	Msa0455830:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr3_3:48875903-48875922	Msa0455830:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr3_3:48876011-48876030	Msa0455830:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr3_3:48876057-48876076	Msa0455830:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr3_3:48876083-48876102	Msa0455830:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr3_3:48876178-48876197	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr3_3:48876188-48876207	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr3_3:48876290-48876309	Msa0455830:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr3_3:48876291-48876310	Msa0455830:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr3_3:48876298-48876317	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr3_3:48876426-48876445	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr3_3:48876441-48876460	Msa0455830:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr3_3:48876476-48876495	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr3_3:48876686-48876705	None:intergenic	45.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr3_3:48875396-48875415	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr3_3:48875510-48875529	Msa0455830:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr3_3:48875529-48875548	Msa0455830:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr3_3:48876090-48876109	Msa0455830:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr3_3:48876172-48876191	Msa0455830:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr3_3:48876179-48876198	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr3_3:48876182-48876201	Msa0455830:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr3_3:48876423-48876442	Msa0455830:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr3_3:48876434-48876453	Msa0455830:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr3_3:48876463-48876482	Msa0455830:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr3_3:48876496-48876515	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr3_3:48876507-48876526	Msa0455830:CDS	50.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr3_3:48875396-48875415	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr3_3:48875510-48875529	Msa0455830:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr3_3:48875529-48875548	Msa0455830:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr3_3:48876090-48876109	Msa0455830:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr3_3:48876172-48876191	Msa0455830:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr3_3:48876179-48876198	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr3_3:48876182-48876201	Msa0455830:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr3_3:48876423-48876442	Msa0455830:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr3_3:48876434-48876453	Msa0455830:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr3_3:48876463-48876482	Msa0455830:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr3_3:48876496-48876515	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr3_3:48876507-48876526	Msa0455830:CDS	50.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr3_3:48875450-48875469	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr3_3:48875477-48875496	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr3_3:48875486-48875505	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr3_3:48875486-48875505	Msa0455830:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr3_3:48875501-48875520	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr3_3:48875515-48875534	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr3_3:48875534-48875553	Msa0455830:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr3_3:48875547-48875566	Msa0455830:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr3_3:48875849-48875868	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr3_3:48876412-48876431	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr3_3:48876413-48876432	Msa0455830:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr3_3:48876419-48876438	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr3_3:48876444-48876463	Msa0455830:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr3_3:48876462-48876481	Msa0455830:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr3_3:48876670-48876689	Msa0455830:CDS	55.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr3_3:48875450-48875469	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr3_3:48875477-48875496	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr3_3:48875486-48875505	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr3_3:48875486-48875505	Msa0455830:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr3_3:48875501-48875520	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr3_3:48875515-48875534	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr3_3:48875534-48875553	Msa0455830:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr3_3:48875547-48875566	Msa0455830:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr3_3:48875849-48875868	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr3_3:48876412-48876431	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr3_3:48876413-48876432	Msa0455830:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr3_3:48876419-48876438	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr3_3:48876444-48876463	Msa0455830:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr3_3:48876462-48876481	Msa0455830:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr3_3:48876670-48876689	Msa0455830:CDS	55.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr3_3:48875437-48875456	Msa0455830:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr3_3:48875447-48875466	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr3_3:48875485-48875504	Msa0455830:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr3_3:48875503-48875522	Msa0455830:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr3_3:48875838-48875857	Msa0455830:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr3_3:48875846-48875865	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr3_3:48876101-48876120	None:intergenic	60.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr3_3:48875437-48875456	Msa0455830:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr3_3:48875447-48875466	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr3_3:48875485-48875504	Msa0455830:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr3_3:48875503-48875522	Msa0455830:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr3_3:48875838-48875857	Msa0455830:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr3_3:48875846-48875865	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr3_3:48876101-48876120	None:intergenic	60.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr3_3:48875440-48875459	Msa0455830:three_prime_UTR	65.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr3_3:48875440-48875459	Msa0455830:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	48875102	48877024	48875102	ID=Msa0455830;Name=Msa0455830
chr3_3	mRNA	48875102	48877024	48875102	ID=Msa0455830-mRNA-1;Parent=Msa0455830;Name=Msa0455830-mRNA-1;_AED=0.11;_eAED=0.11;_QI=100\|1\|1\|1\|1\|1\|4\|362\|371
chr3_3	exon	48875102	48876047	48875102	ID=Msa0455830-mRNA-1:exon:9198;Parent=Msa0455830-mRNA-1
chr3_3	exon	48876202	48876378	48876202	ID=Msa0455830-mRNA-1:exon:9197;Parent=Msa0455830-mRNA-1
chr3_3	exon	48876488	48876765	48876488	ID=Msa0455830-mRNA-1:exon:9196;Parent=Msa0455830-mRNA-1
chr3_3	exon	48876848	48877024	48876848	ID=Msa0455830-mRNA-1:exon:9195;Parent=Msa0455830-mRNA-1
chr3_3	five_prime_UTR	48876925	48877024	48876925	ID=Msa0455830-mRNA-1:five_prime_utr;Parent=Msa0455830-mRNA-1
chr3_3	CDS	48876848	48876924	48876848	ID=Msa0455830-mRNA-1:cds;Parent=Msa0455830-mRNA-1
chr3_3	CDS	48876488	48876765	48876488	ID=Msa0455830-mRNA-1:cds;Parent=Msa0455830-mRNA-1
chr3_3	CDS	48876202	48876378	48876202	ID=Msa0455830-mRNA-1:cds;Parent=Msa0455830-mRNA-1
chr3_3	CDS	48875464	48876047	48875464	ID=Msa0455830-mRNA-1:cds;Parent=Msa0455830-mRNA-1
chr3_3	three_prime_UTR	48875102	48875463	48875102	ID=Msa0455830-mRNA-1:three_prime_utr;Parent=Msa0455830-mRNA-1

Gene Sequence

>Msa0455830

ATGGCTGGTATTGTTGAATCTGATACCATTCCTCTTCTTACTCCTTACAACATGGGCAAATTCGATCTATCTCATAGAGTTGTTTTGGCACCACTCACAAGACAAAGATCCTATGGCAACGTTCCACAACCTCATGCTATCCTCTATTATTCACAGAGAGCCACCGGCTCTAACGGAGGTCTTCTCATAACCGAAGCTACCGGTGTCTCTGACACCGCTCAAGGGTATCCAGACACGCCAGGTATATGGACTAAAGAGCACGTCGAGGCTTGGAAACCCATTGTGGATGCTGTTCATGCTAAAGGTGCTACCTTCTTTTGTCAGATTTGGCATGTTGGAAGAGTTTCTGATTCTGTTTATCAGCCGAATGGACAGGCACCAATATCATCTACAGATAAGTCACTCACACCACAAATTCGAAGTAATGGTTTTAATATTGCAAAATTCACACCACCAAGGCGGCTAAGGACAGATGAAATTTCGAACATTGTCAATGACTTCAGACTTGCTGCTAGAAATGCTATGGAAGCTGGATTTGATGGGGTTGAAATCCATGGGGCTCATGGCTACCTACTTGAACAATTCATGAAAGATAAAGTGAATGACAGAACAGATGAATATGGTGGATCCCTTGAGAACCGTTGTCGGTTTGCTTTGGAAGTTGTTGAAGCTGTTGCAAATGAGATAGGAGCTGATAAAGTTGGAATTAGACTATCACCTTTTGCAGAATATGCAGAATGTGGAGACTCCAACCCTAACGAATTGGGACTTTATATGGTCAATGCCCTCAATAACTATGGTATTCTTTACTGTCATATGGTGGAACCAAGAATGAAAACTGTTGGTGAAAAAACTGAAAGCGCCGACAGCCTTGTGCCGATGAGAAAGGCCTTCAAAGGCACTTTCATGGTTGCAGGAGGTTACGACCGACATGATGGGATCAATGCCATAGCTGAAAACAGGGCAGACCTTGTTGTCTATGGTCGTTTGTTCTTAGCTAATCCAGATTTGCCAAAGAGATTTGCACTTGATGCTCCTCTGAACAAGTATAACAGGGAGACGTTCTACATTTCTGATCCAGTTCTAGGTTATACTGACTACCCCTTTCTTGAATGA

Protein sequence

>Msa0455830

MAGIVESDTIPLLTPYNMGKFDLSHRVVLAPLTRQRSYGNVPQPHAILYYSQRATGSNGGLLITEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGATFFCQIWHVGRVSDSVYQPNGQAPISSTDKSLTPQIRSNGFNIAKFTPPRRLRTDEISNIVNDFRLAARNAMEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFALEVVEAVANEIGADKVGIRLSPFAEYAECGDSNPNELGLYMVNALNNYGILYCHMVEPRMKTVGEKTESADSLVPMRKAFKGTFMVAGGYDRHDGINAIAENRADLVVYGRLFLANPDLPKRFALDAPLNKYNRETFYISDPVLGYTDYPFLE*