Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128720 | ABN09020.1 | 84.526 | 601 | 44 | 6 | 20 | 608 | 1 | 564 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128720 | sp|O23732|GSHB_BRAJU | 64.535 | 516 | 144 | 2 | 92 | 607 | 53 | 529 | 0.0 | 719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128720 | A2Q600 | 84.526 | 601 | 44 | 6 | 20 | 608 | 1 | 564 | 0.0 | 1006 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037720 | Msa1128720 | 0.821955 | 3.065163e-53 | -8.615850e-47 |
| Msa0083240 | Msa1128720 | 0.823546 | 1.307061e-53 | -8.615850e-47 |
| Msa0118620 | Msa1128720 | 0.801663 | 8.097126e-49 | -8.615850e-47 |
| Msa0609270 | Msa1128720 | 0.843366 | 1.464588e-58 | -8.615850e-47 |
| Msa0622070 | Msa1128720 | 0.803863 | 2.846054e-49 | -8.615850e-47 |
| Msa0650060 | Msa1128720 | 0.800819 | 1.205167e-48 | -8.615850e-47 |
| Msa0652700 | Msa1128720 | 0.821204 | 4.571436e-53 | -8.615850e-47 |
| Msa0815650 | Msa1128720 | 0.825836 | 3.771596e-54 | -8.615850e-47 |
| Msa0129640 | Msa1128720 | 0.824310 | 8.651449e-54 | -8.615850e-47 |
| Msa0132430 | Msa1128720 | 0.817706 | 2.869077e-52 | -8.615850e-47 |
| Msa0381470 | Msa1128720 | 0.809153 | 2.178111e-50 | -8.615850e-47 |
| Msa0414720 | Msa1128720 | 0.807164 | 5.779149e-50 | -8.615850e-47 |
| Msa0434140 | Msa1128720 | 0.801492 | 8.776594e-49 | -8.615850e-47 |
| Msa0455830 | Msa1128720 | 0.804079 | 2.566475e-49 | -8.615850e-47 |
| Msa0459630 | Msa1128720 | 0.810999 | 8.719009e-51 | -8.615850e-47 |
| Msa0480770 | Msa1128720 | 0.813482 | 2.503500e-51 | -8.615850e-47 |
| Msa1018210 | Msa1128720 | -0.800704 | 1.272184e-48 | -8.615850e-47 |
| Msa1038940 | Msa1128720 | 0.938878 | 3.243945e-99 | -8.615850e-47 |
| Msa0267230 | Msa1128720 | 0.961516 | 8.592058e-120 | -8.615850e-47 |
| Msa1128720 | Msa1165010 | 0.981260 | 3.694730e-152 | -8.615850e-47 |
| Msa1128720 | Msa1172720 | 0.832206 | 1.079111e-55 | -8.615850e-47 |
| Msa1128720 | Msa1214780 | 0.817481 | 3.224646e-52 | -8.615850e-47 |
| Msa1128720 | Msa1265670 | -0.822094 | 2.846193e-53 | -8.615850e-47 |
| Msa1128720 | Msa1299220 | 0.801612 | 8.292162e-49 | -8.615850e-47 |
| Msa1128720 | Msa1300730 | 0.823608 | 1.263873e-53 | -8.615850e-47 |
| Msa1128720 | Msa1393930 | 0.976808 | 1.538563e-142 | -8.615850e-47 |
| Msa1128720 | Msa1412410 | 0.816723 | 4.774908e-52 | -8.615850e-47 |
| Msa1128720 | Msa1427860 | 0.819094 | 1.390769e-52 | -8.615850e-47 |
| Msa0519910 | Msa1128720 | 0.816760 | 4.683703e-52 | -8.615850e-47 |
| Msa0945230 | Msa1128720 | 0.809865 | 1.531647e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128720 | MtrunA17_Chr7g0273151 | 83.095 | 349 | 40 | 4 | 21 | 358 | 3 | 343 | 0.0 | 570 |
| Msa1128720 | MtrunA17_Chr7g0273161 | 96.414 | 251 | 9 | 0 | 358 | 608 | 2 | 252 | 1.10e-177 | 503 |
| Msa1128720 | MtrunA17_Chr7g0273131 | 66.052 | 271 | 85 | 3 | 69 | 336 | 45 | 311 | 1.24e-117 | 353 |
| Msa1128720 | MtrunA17_Chr7g0273141 | 79.213 | 178 | 37 | 0 | 391 | 568 | 5 | 182 | 4.73e-104 | 312 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128720 | AT5G27380.1 | 64.971 | 511 | 140 | 2 | 97 | 607 | 67 | 538 | 0.0 | 704 |
Find 140 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTGGTACTTATTTA+AGG | 0.124901 | 7_3:-80621436 | Msa1128720:intron |
| CTTGTAGAATTTCTCCTTCT+TGG | 0.158760 | 7_3:+80623750 | None:intergenic |
| GTCTCAGAACTTGGGATATT+TGG | 0.168043 | 7_3:-80621449 | Msa1128720:CDS |
| GCTTGCTTCCATTTACTTTC+TGG | 0.184316 | 7_3:+80625107 | None:intergenic |
| ACACCTGCCATCACCATTAA+TGG | 0.245975 | 7_3:-80625677 | Msa1128720:CDS |
| GCTGCTGCTGCTTCTGCTTC+TGG | 0.247053 | 7_3:-80625851 | Msa1128720:CDS |
| TAGAGCACCTCTAACTTATC+TGG | 0.247256 | 7_3:-80621186 | Msa1128720:three_prime_UTR |
| AAGTTCCTGTTGAATCTTCT+TGG | 0.247926 | 7_3:+80622858 | None:intergenic |
| TAGCCAAGGCCTCGGCATTC+TGG | 0.248762 | 7_3:+80624181 | None:intergenic |
| CGTCATTTCCAGAAAGTAAA+TGG | 0.257725 | 7_3:-80625115 | Msa1128720:CDS |
| AAAACTGCAGCAGAAGTATT+TGG | 0.268628 | 7_3:+80621506 | None:intergenic |
| ATTCTGGCTGACAGCATTAT+TGG | 0.283845 | 7_3:+80624197 | None:intergenic |
| AGCTTATGATGCTCTTGTTT+GGG | 0.286202 | 7_3:-80625570 | Msa1128720:CDS |
| CTCTATTTGCAAAAGGGATT+TGG | 0.292630 | 7_3:+80624537 | None:intergenic |
| TATCATTATGATTGTGGTTC+AGG | 0.293008 | 7_3:-80624038 | Msa1128720:CDS |
| AGGAGAAGGAGGAATGTATT+TGG | 0.308769 | 7_3:+80625796 | None:intergenic |
| GACTTGAATTTGCAGGAATA+AGG | 0.309020 | 7_3:-80621327 | Msa1128720:intron |
| CAGTTGCAGTCATTTACTTC+AGG | 0.313042 | 7_3:-80623602 | Msa1128720:CDS |
| CTTTGCAGGACTGTGGAGTT+TGG | 0.317810 | 7_3:-80621793 | Msa1128720:CDS |
| GGCTTCATTACAAATAATTC+AGG | 0.320071 | 7_3:+80621735 | None:intergenic |
| ACAGGAGGCTCAAATGATAA+TGG | 0.320779 | 7_3:+80621137 | None:intergenic |
| CCCTTCAATATCGTATCATT+TGG | 0.320965 | 7_3:-80622887 | Msa1128720:CDS |
| CCATGGAAAATTGCTTGGTC+TGG | 0.322664 | 7_3:-80624238 | Msa1128720:CDS |
| TAGTACCTCCTCCTTCTCTC+TGG | 0.326878 | 7_3:+80621712 | None:intergenic |
| ACTATTTCATCTTCATTTGC+TGG | 0.337912 | 7_3:-80624508 | Msa1128720:CDS |
| TAGCTTATGATGCTCTTGTT+TGG | 0.342114 | 7_3:-80625571 | Msa1128720:CDS |
| AACTTAATAGGAAATAAGAT+TGG | 0.357115 | 7_3:-80624596 | Msa1128720:intron |
| TCTTTCCAATTACAGAAATC+AGG | 0.362565 | 7_3:-80625188 | Msa1128720:intron |
| CTTGTTTGGGCCTCTCTTCA+CGG | 0.363437 | 7_3:-80625557 | Msa1128720:CDS |
| AAAATGCGTGAATGCTTTGC+AGG | 0.374193 | 7_3:-80621807 | Msa1128720:CDS |
| GTTGACCGTGTTAGTTTAGA+TGG | 0.384757 | 7_3:-80625053 | Msa1128720:CDS |
| CTCTCTTCACGGTCTCCTCA+TGG | 0.391323 | 7_3:-80625546 | Msa1128720:CDS |
| ATGGAAGCAAGCTTCTGATT+TGG | 0.394917 | 7_3:-80625096 | Msa1128720:CDS |
| CAGCCAGAATGCCGAGGCCT+TGG | 0.406436 | 7_3:-80624184 | Msa1128720:CDS |
| ATACCCTCTGATATCACATT+TGG | 0.409337 | 7_3:+80623898 | None:intergenic |
| GACCACGCCGTCTCAGAACT+TGG | 0.416285 | 7_3:-80621458 | Msa1128720:CDS |
| CGATACGATGTTGAAGCAAT+AGG | 0.419718 | 7_3:-80625878 | Msa1128720:CDS |
| CAGAAATCAGGAATGGTTCC+TGG | 0.422349 | 7_3:-80625176 | Msa1128720:CDS |
| TTTGTTGAGCTGTAGCATCT+TGG | 0.432576 | 7_3:+80624779 | None:intergenic |
| TGTTGAGCTCTATTTGCAAA+AGG | 0.432901 | 7_3:+80624530 | None:intergenic |
| CTCATAAAATTGCAGAAAAC+GGG | 0.433571 | 7_3:-80621572 | Msa1128720:CDS |
| CAGGAGGCTCAAATGATAAT+GGG | 0.436248 | 7_3:+80621138 | None:intergenic |
| CCTCATAAAATTGCAGAAAA+CGG | 0.438181 | 7_3:-80621573 | Msa1128720:CDS |
| TCAACAAGTTCATTGAATAT+AGG | 0.442386 | 7_3:+80625071 | None:intergenic |
| AGTACCTCCTCCTTCTCTCT+GGG | 0.443480 | 7_3:+80621713 | None:intergenic |
| ACTTAATAGGAAATAAGATT+GGG | 0.446606 | 7_3:-80624595 | Msa1128720:intron |
| TACTTTCTGGAAATGACGTT+GGG | 0.448557 | 7_3:+80625120 | None:intergenic |
| AATATACCCAGATAAGTTAG+AGG | 0.449017 | 7_3:+80621179 | None:intergenic |
| TACAAGGTAAAGATAGAAGA+AGG | 0.451074 | 7_3:+80625756 | None:intergenic |
| TCAATATCGTATCATTTGGT+TGG | 0.454140 | 7_3:-80622883 | Msa1128720:CDS |
| GCTTGGTCTGGATTCAGAAA+AGG | 0.454195 | 7_3:-80624226 | Msa1128720:CDS |
| TGATGATGATGAGACATTAG+AGG | 0.456067 | 7_3:+80625713 | None:intergenic |
| TCTTGCCATGGAAAATTGCT+TGG | 0.461118 | 7_3:-80624243 | Msa1128720:CDS |
| GACGAAGGTGGGGTTGCAGC+TGG | 0.464192 | 7_3:-80621245 | Msa1128720:CDS |
| TGGACAAAGGTATTATTGTC+TGG | 0.469663 | 7_3:+80625816 | None:intergenic |
| GATTCTGAAGGATAATCAAC+TGG | 0.471685 | 7_3:+80623567 | None:intergenic |
| GTTGAGCTCTATTTGCAAAA+GGG | 0.477698 | 7_3:+80624531 | None:intergenic |
| GACGTTGGGAATAATGCAAA+CGG | 0.479910 | 7_3:+80625134 | None:intergenic |
| AGAGGCAGACAAATATAAAC+AGG | 0.483894 | 7_3:+80621119 | None:intergenic |
| AGTTTATAACTACGGTGATA+AGG | 0.484715 | 7_3:+80623956 | None:intergenic |
| ACGTTGGGAATAATGCAAAC+GGG | 0.485054 | 7_3:+80625135 | None:intergenic |
| GAATTTGCAGGAATAAGGAT+AGG | 0.485387 | 7_3:-80621322 | Msa1128720:intron |
| GAAGGAGAAATTCTACAAGA+TGG | 0.488802 | 7_3:-80623746 | Msa1128720:CDS |
| CATGGGAGATAAATCTTACC+AGG | 0.493452 | 7_3:-80625528 | Msa1128720:intron |
| CTCTTGTCACTCAACTTCAT+AGG | 0.498422 | 7_3:-80624477 | Msa1128720:intron |
| AGTTGCAGTCATTTACTTCA+GGG | 0.502680 | 7_3:-80623601 | Msa1128720:CDS |
| CCGAGGCCTTGGCTAAAGCT+TGG | 0.504909 | 7_3:-80624173 | Msa1128720:CDS |
| CTATTGTAAGTTTATAACTA+CGG | 0.508138 | 7_3:+80623948 | None:intergenic |
| AGGTACATACTTTCTTGCCA+TGG | 0.512977 | 7_3:-80624255 | Msa1128720:CDS |
| GCAGTCATTTACTTCAGGGC+TGG | 0.514362 | 7_3:-80623597 | Msa1128720:CDS |
| AGTATTGATCAACAACTTCT+CGG | 0.516257 | 7_3:-80625599 | Msa1128720:CDS |
| TCTCTTCACGGTCTCCTCAT+GGG | 0.517899 | 7_3:-80625545 | Msa1128720:CDS |
| TTCATCGCCATTAATGGTGA+TGG | 0.520509 | 7_3:+80625670 | None:intergenic |
| CCAATTACAGAAATCAGGAA+TGG | 0.520677 | 7_3:-80625183 | Msa1128720:intron |
| TATTTATGGTGAAGCAGTGC+GGG | 0.520781 | 7_3:-80621600 | Msa1128720:CDS |
| CAGGGCTATCATTATGATTG+TGG | 0.521933 | 7_3:-80624044 | Msa1128720:CDS |
| ACCAAATGATACGATATTGA+AGG | 0.522355 | 7_3:+80622886 | None:intergenic |
| TATCATCATCTGACGAAGGT+GGG | 0.522364 | 7_3:-80621256 | Msa1128720:CDS |
| TGGCTGACAGCATTATTGGC+AGG | 0.526065 | 7_3:+80624201 | None:intergenic |
| TGGCACCAAGAAGATTCAAC+AGG | 0.526530 | 7_3:-80622863 | Msa1128720:CDS |
| AATTTGCAGGAATAAGGATA+GGG | 0.531981 | 7_3:-80621321 | Msa1128720:intron |
| ATCAGGAATGGTTCCTGGTG+TGG | 0.532782 | 7_3:-80625171 | Msa1128720:CDS |
| CAACAGGAACTTGCAAAGCC+AGG | 0.536479 | 7_3:-80622847 | Msa1128720:CDS |
| TGATAATCATCAGCGAATAG+AGG | 0.539988 | 7_3:+80625623 | None:intergenic |
| CCAAGCTTTAGCCAAGGCCT+CGG | 0.543942 | 7_3:+80624173 | None:intergenic |
| TCCTTAGCTTTGAACACGCA+TGG | 0.547326 | 7_3:-80623809 | Msa1128720:CDS |
| ATATGCAGGAATGGAGAGCT+AGG | 0.552197 | 7_3:-80622942 | Msa1128720:intron |
| CAAAGCCAGGTGTTCTTGAG+AGG | 0.552723 | 7_3:-80622834 | Msa1128720:intron |
| TCAGGAATGGTTCCTGGTGT+GGG | 0.557885 | 7_3:-80625170 | Msa1128720:CDS |
| GTAATGAAGCCCCAGAGAGA+AGG | 0.558389 | 7_3:-80621723 | Msa1128720:CDS |
| ATGAAGCCCCAGAGAGAAGG+AGG | 0.563223 | 7_3:-80621720 | Msa1128720:CDS |
| ACCATGCGTGTTCAAAGCTA+AGG | 0.563501 | 7_3:+80623808 | None:intergenic |
| TTACTTTCTGGAAATGACGT+TGG | 0.567133 | 7_3:+80625119 | None:intergenic |
| TTCTTCAAGAATCTCTCTCA+AGG | 0.567231 | 7_3:-80625025 | Msa1128720:intron |
| ATGGAGAGCTAGGCTACTGA+TGG | 0.569626 | 7_3:-80622932 | Msa1128720:CDS |
| TCATCAGCGAATAGAGGAGG+AGG | 0.570573 | 7_3:+80625629 | None:intergenic |
| GAACAGCAGAAAGAAAATGC+TGG | 0.573205 | 7_3:+80623993 | None:intergenic |
| TCAGCGAATAGAGGAGGAGG+AGG | 0.573514 | 7_3:+80625632 | None:intergenic |
| ATCATCATCTGACGAAGGTG+GGG | 0.576564 | 7_3:-80621255 | Msa1128720:CDS |
| TGGCCACTTACTGATTCTGA+AGG | 0.580546 | 7_3:+80623555 | None:intergenic |
| AGAGCACCTCTAACTTATCT+GGG | 0.583038 | 7_3:-80621185 | Msa1128720:three_prime_UTR |
| TCAATCCAGAACTAAGCAAG+TGG | 0.583274 | 7_3:-80624835 | Msa1128720:intron |
| CCAAATGATACGATATTGAA+GGG | 0.583942 | 7_3:+80622887 | None:intergenic |
| GGAGGAATGTATTTGGACAA+AGG | 0.587129 | 7_3:+80625803 | None:intergenic |
| TCGCCATTAATGGTGATGGC+AGG | 0.589219 | 7_3:+80625674 | None:intergenic |
| ATGAATATCTAAAAGTCTAG+AGG | 0.596316 | 7_3:+80624803 | None:intergenic |
| TACAATTGTTCGCAAAACGA+TGG | 0.597280 | 7_3:-80623783 | Msa1128720:CDS |
| GTCGTCGAGAAATTTATACA+AGG | 0.599831 | 7_3:+80625740 | None:intergenic |
| CGATGTTGAAGCAATAGGCA+TGG | 0.604299 | 7_3:-80625873 | Msa1128720:CDS |
| ATATCATCATCTGACGAAGG+TGG | 0.604927 | 7_3:-80621257 | Msa1128720:CDS |
| TGTAACTATACAACACACCA+TGG | 0.605619 | 7_3:+80621049 | None:intergenic |
| GCATGCATCAATCCCACACC+AGG | 0.606616 | 7_3:+80625158 | None:intergenic |
| AGATACCTCTCAAGAACACC+TGG | 0.608405 | 7_3:+80622829 | None:intergenic |
| ATGGCAGAAGTTGACCAAGA+AGG | 0.613185 | 7_3:-80623764 | Msa1128720:CDS |
| ACCACGCCGTCTCAGAACTT+GGG | 0.613931 | 7_3:-80621457 | Msa1128720:CDS |
| CATGAGGAGACCGTGAAGAG+AGG | 0.614477 | 7_3:+80625547 | None:intergenic |
| CTACCAAATGTGATATCAGA+GGG | 0.618198 | 7_3:-80623901 | Msa1128720:CDS |
| AAGCCCCAGAGAGAAGGAGG+AGG | 0.623964 | 7_3:-80621717 | Msa1128720:intron |
| AAATATCCCAAGTTCTGAGA+CGG | 0.625935 | 7_3:+80621451 | None:intergenic |
| ACTGTGGAGTTTGGATGACT+CGG | 0.630953 | 7_3:-80621784 | Msa1128720:CDS |
| GGAGTGAGTATAATAACCCC+AGG | 0.633676 | 7_3:-80624152 | Msa1128720:intron |
| CTCACTCCAAGCTTTAGCCA+AGG | 0.636780 | 7_3:+80624167 | None:intergenic |
| TGCTGTCAGCCAGAATGCCG+AGG | 0.640820 | 7_3:-80624190 | Msa1128720:CDS |
| GCGTAATGGTTGTTGGCACA+AGG | 0.648992 | 7_3:-80621480 | Msa1128720:CDS |
| CAGCTTACATACTTATGCAG+AGG | 0.649813 | 7_3:-80621535 | Msa1128720:CDS |
| CGTTGGGAATAATGCAAACG+GGG | 0.650289 | 7_3:+80625136 | None:intergenic |
| GCTACCAAATGTGATATCAG+AGG | 0.651435 | 7_3:-80623902 | Msa1128720:CDS |
| GTACCTCCTCCTTCTCTCTG+GGG | 0.656439 | 7_3:+80621714 | None:intergenic |
| TCCCAAGTTCTGAGACGGCG+TGG | 0.660655 | 7_3:+80621456 | None:intergenic |
| AAAATATCATCATCTGACGA+AGG | 0.662845 | 7_3:-80621260 | Msa1128720:CDS |
| GGCAGACAAATATAAACAGG+AGG | 0.666515 | 7_3:+80621122 | None:intergenic |
| TAATCATCAGCGAATAGAGG+AGG | 0.667692 | 7_3:+80625626 | None:intergenic |
| GTTGTCGTGAATAATCAAAG+TGG | 0.670695 | 7_3:-80621299 | Msa1128720:CDS |
| GTAACTATACAACACACCAT+GGG | 0.672655 | 7_3:+80621050 | None:intergenic |
| GAGGTGCTCTACATCAAGTG+AGG | 0.688457 | 7_3:+80621198 | None:intergenic |
| ATATTTATGGTGAAGCAGTG+CGG | 0.689917 | 7_3:-80621601 | Msa1128720:CDS |
| ATTCACCATCTAAACTAACA+CGG | 0.698126 | 7_3:+80625048 | None:intergenic |
| GGTAAGATTTATCTCCCATG+AGG | 0.699020 | 7_3:+80625531 | None:intergenic |
| GTGAATGCTTTGCAGGACTG+TGG | 0.717162 | 7_3:-80621800 | Msa1128720:CDS |
| ATAACGTAAAATAAACAACG+TGG | 0.837611 | 7_3:+80621073 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTTTTTTTTATAAAG+TGG | - | chr7_3:80622240-80622259 | Msa1128720:intron | 10.0% |
| !!! | TTATATTTTTAAACATATTC+TGG | - | chr7_3:80623060-80623079 | Msa1128720:intron | 10.0% |
| !!! | AAATACAAATCAATATATTT+TGG | + | chr7_3:80624982-80625001 | None:intergenic | 10.0% |
| !! | TGTAATCATTTAGAAATATA+AGG | + | chr7_3:80622840-80622859 | None:intergenic | 15.0% |
| !! | TCAACAAATAATATAACTTA+TGG | + | chr7_3:80623688-80623707 | None:intergenic | 15.0% |
| !!! | AAGTTATATTATTTGTTGAT+TGG | - | chr7_3:80623689-80623708 | Msa1128720:intron | 15.0% |
| !! | GTTTAAATATTTATCTTATC+CGG | - | chr7_3:80624714-80624733 | Msa1128720:intron | 15.0% |
| !! | ATGAAATGAAAATAAGAAGA+AGG | + | chr7_3:80621413-80621432 | None:intergenic | 20.0% |
| !! | ATAGTAATTTACAAAATCAC+TGG | - | chr7_3:80621536-80621555 | Msa1128720:CDS | 20.0% |
| !! | ATTTGAGCTGTAAATAAATT+AGG | - | chr7_3:80621652-80621671 | Msa1128720:intron | 20.0% |
| !! | TTTAAAAATATGAACAAGCA+AGG | - | chr7_3:80621675-80621694 | Msa1128720:intron | 20.0% |
| !!! | TTTTTTATAAAGTGGATCAA+AGG | - | chr7_3:80622248-80622267 | Msa1128720:intron | 20.0% |
| !!! | TGATATATTACTTTTACTGT+TGG | - | chr7_3:80622278-80622297 | Msa1128720:intron | 20.0% |
| !! | AACTTAATAGGAAATAAGAT+TGG | - | chr7_3:80622310-80622329 | Msa1128720:intron | 20.0% |
| !! | ACTTAATAGGAAATAAGATT+GGG | - | chr7_3:80622311-80622330 | Msa1128720:intron | 20.0% |
| !! | ATTTCTAAATGATTACATAC+AGG | - | chr7_3:80622843-80622862 | Msa1128720:CDS | 20.0% |
| !! | TTTCTAAATGATTACATACA+GGG | - | chr7_3:80622844-80622863 | Msa1128720:CDS | 20.0% |
| !! | CTATTGTAAGTTTATAACTA+CGG | + | chr7_3:80622961-80622980 | None:intergenic | 20.0% |
| !! | AAAGTGTAGTTTATCATATA+AGG | - | chr7_3:80623031-80623050 | Msa1128720:intron | 20.0% |
| !!! | CAATTTTTTTACTGTAGTAA+TGG | - | chr7_3:80623276-80623295 | Msa1128720:intron | 20.0% |
| !!! | TATATTATTTGTTGATTGGT+CGG | - | chr7_3:80623693-80623712 | Msa1128720:intron | 20.0% |
| !! | TAATCTAACGGTAAAAAAAA+AGG | + | chr7_3:80623769-80623788 | None:intergenic | 20.0% |
| !! | GTTTGAAAAAAGTAATCTAA+CGG | + | chr7_3:80623781-80623800 | None:intergenic | 20.0% |
| !! | CATGATTAATCAAATAAGTA+AGG | + | chr7_3:80624269-80624288 | None:intergenic | 20.0% |
| !! | CTTACTTATTTGATTAATCA+TGG | - | chr7_3:80624267-80624286 | Msa1128720:intron | 20.0% |
| !! | TATTTGATTAATCATGGATA+TGG | - | chr7_3:80624273-80624292 | Msa1128720:intron | 20.0% |
| !! | AACAAGATATGAAAAAGATA+TGG | + | chr7_3:80624365-80624384 | None:intergenic | 20.0% |
| !!! | AATTTTGGAAGAAAAATTGA+AGG | + | chr7_3:80624758-80624777 | None:intergenic | 20.0% |
| !! | GAAAAAAAAGCAAAATAAGA+AGG | - | chr7_3:80624792-80624811 | Msa1128720:CDS | 20.0% |
| !!! | GAAGGAAAAAAAAATCATTT+TGG | - | chr7_3:80624810-80624829 | Msa1128720:CDS | 20.0% |
| !!! | AAAAAATCATTTTGGATGAT+CGG | - | chr7_3:80624818-80624837 | Msa1128720:CDS | 20.0% |
| !!! | AATATAATTTTCAACAGAGT+TGG | + | chr7_3:80625255-80625274 | None:intergenic | 20.0% |
| !!! | ATGATCTGTAATTATTTTTC+AGG | - | chr7_3:80625277-80625296 | Msa1128720:intron | 20.0% |
| !!! | TTTTCAGGAAACAATATTTA+TGG | - | chr7_3:80625292-80625311 | Msa1128720:intron | 20.0% |
| ! | GCTTAGTAAAAATGAGTTTA+TGG | + | chr7_3:80621471-80621490 | None:intergenic | 25.0% |
| ! | AAACTCATTGTAAAACCAAA+CGG | + | chr7_3:80621507-80621526 | None:intergenic | 25.0% |
| ! | TCAACAAGTTCATTGAATAT+AGG | + | chr7_3:80621838-80621857 | None:intergenic | 25.0% |
| ! | TATTCTTATTCATTGTCAAG+TGG | - | chr7_3:80621938-80621957 | Msa1128720:intron | 25.0% |
| ! | ATTCTTATTCATTGTCAAGT+GGG | - | chr7_3:80621939-80621958 | Msa1128720:intron | 25.0% |
| ! | TGACAATTAAAAGCTGAAAA+TGG | + | chr7_3:80622026-80622045 | None:intergenic | 25.0% |
| ! | ATGAATATCTAAAAGTCTAG+AGG | + | chr7_3:80622106-80622125 | None:intergenic | 25.0% |
| !! | TGGCATCAATTTAACTTAAT+AGG | - | chr7_3:80622298-80622317 | Msa1128720:intron | 25.0% |
| ! | GAAGTGAAACAAATATCTAA+AGG | + | chr7_3:80622513-80622532 | None:intergenic | 25.0% |
| !! | GAAAAAGGATATTTGTTTCT+CGG | + | chr7_3:80622786-80622805 | None:intergenic | 25.0% |
| ! | AGAATAAAGTGAACTGAAAA+AGG | + | chr7_3:80622801-80622820 | None:intergenic | 25.0% |
| !! | CTTTATTCTACTGCTAATTT+TGG | - | chr7_3:80622812-80622831 | Msa1128720:intron | 25.0% |
| ! | ACAAGCAAGAAAAAATAAAC+TGG | + | chr7_3:80623374-80623393 | None:intergenic | 25.0% |
| ! | AACTCATTATCTGAAAGATT+AGG | - | chr7_3:80623447-80623466 | Msa1128720:intron | 25.0% |
| ! | ATTATCTGAAAGATTAGGAA+AGG | - | chr7_3:80623452-80623471 | Msa1128720:intron | 25.0% |
| ! | AAACCAACAGAACAAAAATA+AGG | + | chr7_3:80623564-80623583 | None:intergenic | 25.0% |
| ! | GGAAGTTATTTATCTTCAAA+AGG | + | chr7_3:80623639-80623658 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTTCCAGTT+TGG | - | chr7_3:80623643-80623662 | Msa1128720:intron | 25.0% |
| ! | AACAATAACTGAAAAAAGCA+AGG | + | chr7_3:80624127-80624146 | None:intergenic | 25.0% |
| ! | TTAATCAAATAAGTAAGGCA+TGG | + | chr7_3:80624264-80624283 | None:intergenic | 25.0% |
| !! | AAATTGAAGGTACAAGAAAA+GGG | + | chr7_3:80624745-80624764 | None:intergenic | 25.0% |
| !! | AAAATTGAAGGTACAAGAAA+AGG | + | chr7_3:80624746-80624765 | None:intergenic | 25.0% |
| ! | ATACTTCCTATTATGGTTAT+AGG | - | chr7_3:80624874-80624893 | Msa1128720:intron | 25.0% |
| ! | GTAATTCCTATAACCATAAT+AGG | + | chr7_3:80624883-80624902 | None:intergenic | 25.0% |
| ! | GGATATTTGGTACTTATTTA+AGG | - | chr7_3:80625470-80625489 | Msa1128720:intron | 25.0% |
| ! | TCTGCAAAAAATTGAAAGAA+GGG | - | chr7_3:80625807-80625826 | Msa1128720:CDS | 25.0% |
| ! | ATAACGTAAAATAAACAACG+TGG | + | chr7_3:80625836-80625855 | None:intergenic | 25.0% |
| TACAAGGTAAAGATAGAAGA+AGG | + | chr7_3:80621153-80621172 | None:intergenic | 30.0% | |
| !! | AGTATTGATCAACAACTTCT+CGG | - | chr7_3:80621307-80621326 | Msa1128720:CDS | 30.0% |
| TCTTTCCAATTACAGAAATC+AGG | - | chr7_3:80621718-80621737 | Msa1128720:CDS | 30.0% | |
| ATTCACCATCTAAACTAACA+CGG | + | chr7_3:80621861-80621880 | None:intergenic | 30.0% | |
| AGTGAAGTGAATTAGTAGAA+CGG | + | chr7_3:80621908-80621927 | None:intergenic | 30.0% | |
| ATGGAAAAGACGTAGAAAAA+AGG | + | chr7_3:80622007-80622026 | None:intergenic | 30.0% | |
| TATGTAGCGTTATTGTGAAA+AGG | + | chr7_3:80622213-80622232 | None:intergenic | 30.0% | |
| ACTATTTCATCTTCATTTGC+TGG | - | chr7_3:80622398-80622417 | Msa1128720:intron | 30.0% | |
| !! | AAATTCTGAGGTGAAACATA+GGG | + | chr7_3:80622597-80622616 | None:intergenic | 30.0% |
| !! | AAAATTCTGAGGTGAAACAT+AGG | + | chr7_3:80622598-80622617 | None:intergenic | 30.0% |
| ! | TTTTTCTGACCCAATTGTTT+CGG | - | chr7_3:80622615-80622634 | Msa1128720:intron | 30.0% |
| AATCACAAACCGAAACAATT+GGG | + | chr7_3:80622627-80622646 | None:intergenic | 30.0% | |
| AAATCACAAACCGAAACAAT+TGG | + | chr7_3:80622628-80622647 | None:intergenic | 30.0% | |
| TATCATTATGATTGTGGTTC+AGG | - | chr7_3:80622868-80622887 | Msa1128720:CDS | 30.0% | |
| AGTTTATAACTACGGTGATA+AGG | + | chr7_3:80622953-80622972 | None:intergenic | 30.0% | |
| TAAAGAAAGTCAGTTTCTGA+TGG | + | chr7_3:80623213-80623232 | None:intergenic | 30.0% | |
| ! | ACTGACTTTCTTTAAGTTTG+TGG | - | chr7_3:80623219-80623238 | Msa1128720:intron | 30.0% |
| !! | AAAAGGTGTTCAATACTTGT+AGG | + | chr7_3:80623622-80623641 | None:intergenic | 30.0% |
| ! | TATGGAACTCAACTATTTTG+AGG | + | chr7_3:80623670-80623689 | None:intergenic | 30.0% |
| ACCTCAATCTTTCTATTCTA+TGG | - | chr7_3:80623823-80623842 | Msa1128720:intron | 30.0% | |
| TCCATAGAATAGAAAGATTG+AGG | + | chr7_3:80623827-80623846 | None:intergenic | 30.0% | |
| CCAAATGATACGATATTGAA+GGG | + | chr7_3:80624022-80624041 | None:intergenic | 30.0% | |
| ACCAAATGATACGATATTGA+AGG | + | chr7_3:80624023-80624042 | None:intergenic | 30.0% | |
| TCAATATCGTATCATTTGGT+TGG | - | chr7_3:80624023-80624042 | Msa1128720:CDS | 30.0% | |
| CCAACCAATCAAATCATAAA+TGG | + | chr7_3:80624308-80624327 | None:intergenic | 30.0% | |
| CCATTTATGATTTGATTGGT+TGG | - | chr7_3:80624305-80624324 | Msa1128720:intron | 30.0% | |
| TGCATCGTTAATAACTGAAA+CGG | - | chr7_3:80624444-80624463 | Msa1128720:intron | 30.0% | |
| TCATAAGAATGAATTCAACG+CGG | - | chr7_3:80624544-80624563 | Msa1128720:CDS | 30.0% | |
| !! | GTTTTGATGTTAGAGAAAAC+TGG | - | chr7_3:80624566-80624585 | Msa1128720:CDS | 30.0% |
| ! | CGTTAAATCATGATTAGTTG+CGG | + | chr7_3:80624592-80624611 | None:intergenic | 30.0% |
| CGCAACTAATCATGATTTAA+CGG | - | chr7_3:80624590-80624609 | Msa1128720:intron | 30.0% | |
| GCAACTAATCATGATTTAAC+GGG | - | chr7_3:80624591-80624610 | Msa1128720:intron | 30.0% | |
| ! | AATTGAAGGTACAAGAAAAG+GGG | + | chr7_3:80624744-80624763 | None:intergenic | 30.0% |
| ! | CAAGACAGAACAAGTAATTT+TGG | + | chr7_3:80624773-80624792 | None:intergenic | 30.0% |
| TGTAAATGAATATGTTCCCT+TGG | - | chr7_3:80624841-80624860 | Msa1128720:intron | 30.0% | |
| TACACTCATACTTCCTATTA+TGG | - | chr7_3:80624867-80624886 | Msa1128720:intron | 30.0% | |
| !!! | CAGTTTTGATTCAAGGATTT+AGG | + | chr7_3:80625044-80625063 | None:intergenic | 30.0% |
| GGCTTCATTACAAATAATTC+AGG | + | chr7_3:80625174-80625193 | None:intergenic | 30.0% | |
| ! | AAAGTTAGATCACGTTTTAG+GGG | + | chr7_3:80625223-80625242 | None:intergenic | 30.0% |
| ! | GAAAGTTAGATCACGTTTTA+GGG | + | chr7_3:80625224-80625243 | None:intergenic | 30.0% |
| ! | AGAAAGTTAGATCACGTTTT+AGG | + | chr7_3:80625225-80625244 | None:intergenic | 30.0% |
| ! | CGTTTTCTGCAATTTTATGA+GGG | + | chr7_3:80625335-80625354 | None:intergenic | 30.0% |
| CCTCATAAAATTGCAGAAAA+CGG | - | chr7_3:80625333-80625352 | Msa1128720:intron | 30.0% | |
| CTCATAAAATTGCAGAAAAC+GGG | - | chr7_3:80625334-80625353 | Msa1128720:intron | 30.0% | |
| GACTATATATCTCTATAGCT+CGG | - | chr7_3:80625503-80625522 | Msa1128720:intron | 30.0% | |
| AATTTGCAGGAATAAGGATA+GGG | - | chr7_3:80625585-80625604 | Msa1128720:CDS | 30.0% | |
| AAAATATCATCATCTGACGA+AGG | - | chr7_3:80625646-80625665 | Msa1128720:CDS | 30.0% | |
| AATATACCCAGATAAGTTAG+AGG | + | chr7_3:80625730-80625749 | None:intergenic | 30.0% | |
| !!! | CTTCTTTCAATTTTTTGCAG+AGG | + | chr7_3:80625808-80625827 | None:intergenic | 30.0% |
| CTCTGCAAAAAATTGAAAGA+AGG | - | chr7_3:80625806-80625825 | Msa1128720:CDS | 30.0% | |
| !!! | GTTTATTTTACGTTATCCCA+TGG | - | chr7_3:80625840-80625859 | Msa1128720:CDS | 30.0% |
| !! | TTTGAGCAAAAAGCATTAAC+AGG | + | chr7_3:80625892-80625911 | None:intergenic | 30.0% |
| !! | TGGACAAAGGTATTATTGTC+TGG | + | chr7_3:80621093-80621112 | None:intergenic | 35.0% |
| !!! | AGAAGGTTGTTGTTTTTGTG+AGG | + | chr7_3:80621136-80621155 | None:intergenic | 35.0% |
| GTCGTCGAGAAATTTATACA+AGG | + | chr7_3:80621169-80621188 | None:intergenic | 35.0% | |
| ! | TGATGATGATGAGACATTAG+AGG | + | chr7_3:80621196-80621215 | None:intergenic | 35.0% |
| !! | GTTTTGTTCATCGCCATTAA+TGG | + | chr7_3:80621245-80621264 | None:intergenic | 35.0% |
| TGATAATCATCAGCGAATAG+AGG | + | chr7_3:80621286-80621305 | None:intergenic | 35.0% | |
| TAGCTTATGATGCTCTTGTT+TGG | - | chr7_3:80621335-80621354 | Msa1128720:intron | 35.0% | |
| ! | AGCTTATGATGCTCTTGTTT+GGG | - | chr7_3:80621336-80621355 | Msa1128720:intron | 35.0% |
| ATTGTAAAACCAAACGGTGA+TGG | + | chr7_3:80621501-80621520 | None:intergenic | 35.0% | |
| TGGAATTAAGCATGCATGTT+TGG | - | chr7_3:80621625-80621644 | Msa1128720:intron | 35.0% | |
| CCATTCCTGATTTCTGTAAT+TGG | + | chr7_3:80621726-80621745 | None:intergenic | 35.0% | |
| CCAATTACAGAAATCAGGAA+TGG | - | chr7_3:80621723-80621742 | Msa1128720:CDS | 35.0% | |
| ! | TACTTTCTGGAAATGACGTT+GGG | + | chr7_3:80621789-80621808 | None:intergenic | 35.0% |
| ! | TTACTTTCTGGAAATGACGT+TGG | + | chr7_3:80621790-80621809 | None:intergenic | 35.0% |
| CGTCATTTCCAGAAAGTAAA+TGG | - | chr7_3:80621791-80621810 | Msa1128720:CDS | 35.0% | |
| TTCTTCAAGAATCTCTCTCA+AGG | - | chr7_3:80621881-80621900 | Msa1128720:intron | 35.0% | |
| CCAAACCAAACAAACGAAAA+GGG | + | chr7_3:80621968-80621987 | None:intergenic | 35.0% | |
| ACCAAACCAAACAAACGAAA+AGG | + | chr7_3:80621969-80621988 | None:intergenic | 35.0% | |
| ! | GGTAGCTATATTGGTTAAAG+TGG | - | chr7_3:80622159-80622178 | Msa1128720:intron | 35.0% |
| CTCTATTTGCAAAAGGGATT+TGG | + | chr7_3:80622372-80622391 | None:intergenic | 35.0% | |
| GTTGAGCTCTATTTGCAAAA+GGG | + | chr7_3:80622378-80622397 | None:intergenic | 35.0% | |
| TGTTGAGCTCTATTTGCAAA+AGG | + | chr7_3:80622379-80622398 | None:intergenic | 35.0% | |
| GCAAAAGAGATGAAAAACAG+AGG | + | chr7_3:80622572-80622591 | None:intergenic | 35.0% | |
| TTGGGTCAGAAAAAATTCTG+AGG | + | chr7_3:80622609-80622628 | None:intergenic | 35.0% | |
| !! | GTTTCGGTTTGTGATTTTTC+AGG | - | chr7_3:80622631-80622650 | Msa1128720:intron | 35.0% |
| CTACCAAATGTGATATCAGA+GGG | - | chr7_3:80623005-80623024 | Msa1128720:intron | 35.0% | |
| ATACCCTCTGATATCACATT+TGG | + | chr7_3:80623011-80623030 | None:intergenic | 35.0% | |
| TACAATTGTTCGCAAAACGA+TGG | - | chr7_3:80623123-80623142 | Msa1128720:intron | 35.0% | |
| CTTGTAGAATTTCTCCTTCT+TGG | + | chr7_3:80623159-80623178 | None:intergenic | 35.0% | |
| GAAGGAGAAATTCTACAAGA+TGG | - | chr7_3:80623160-80623179 | Msa1128720:intron | 35.0% | |
| AGTTGCAGTCATTTACTTCA+GGG | - | chr7_3:80623305-80623324 | Msa1128720:intron | 35.0% | |
| ! | GATTCTGAAGGATAATCAAC+TGG | + | chr7_3:80623342-80623361 | None:intergenic | 35.0% |
| TATCCTTCAGAATCAGTAAG+TGG | - | chr7_3:80623348-80623367 | Msa1128720:intron | 35.0% | |
| ! | ATTGCGCTTTTACATCGTAA+AGG | - | chr7_3:80623402-80623421 | Msa1128720:intron | 35.0% |
| ATCATACCAGGTAATTCAGT+GGG | + | chr7_3:80623482-80623501 | None:intergenic | 35.0% | |
| CCAACAGAACAAAAATAAGG+TGG | + | chr7_3:80623561-80623580 | None:intergenic | 35.0% | |
| !!! | CCACCTTATTTTTGTTCTGT+TGG | - | chr7_3:80623558-80623577 | Msa1128720:intron | 35.0% |
| !!! | AACTATTTTGAGGTCCAAAC+TGG | + | chr7_3:80623660-80623679 | None:intergenic | 35.0% |
| GAACTCATTGTCAGGATAAA+AGG | + | chr7_3:80623912-80623931 | None:intergenic | 35.0% | |
| GCATAACTTACTCAATATGC+AGG | - | chr7_3:80623950-80623969 | Msa1128720:CDS | 35.0% | |
| ACTTACTCAATATGCAGGAA+TGG | - | chr7_3:80623955-80623974 | Msa1128720:CDS | 35.0% | |
| CCCTTCAATATCGTATCATT+TGG | - | chr7_3:80624019-80624038 | Msa1128720:CDS | 35.0% | |
| AAGTTCCTGTTGAATCTTCT+TGG | + | chr7_3:80624051-80624070 | None:intergenic | 35.0% | |
| AGAACATAAGATCCAGAAGA+AGG | + | chr7_3:80624236-80624255 | None:intergenic | 35.0% | |
| CAAATAAGTAAGGCATGGAT+TGG | + | chr7_3:80624259-80624278 | None:intergenic | 35.0% | |
| CCAATCAAATCATAAATGGC+TGG | + | chr7_3:80624304-80624323 | None:intergenic | 35.0% | |
| CCAGCCATTTATGATTTGAT+TGG | - | chr7_3:80624301-80624320 | Msa1128720:intron | 35.0% | |
| TCGTTAATAACTGAAACGGA+AGG | - | chr7_3:80624448-80624467 | Msa1128720:intron | 35.0% | |
| AATAACTGAAACGGAAGGTT+TGG | - | chr7_3:80624453-80624472 | Msa1128720:intron | 35.0% | |
| ATTCAAAACTCTTCCTAGAG+AGG | - | chr7_3:80624639-80624658 | Msa1128720:intron | 35.0% | |
| AATTCAACTCAATCCTCTCT+AGG | + | chr7_3:80624655-80624674 | None:intergenic | 35.0% | |
| AAGTATGAGTGTAGTTCCAA+GGG | + | chr7_3:80624860-80624879 | None:intergenic | 35.0% | |
| ! | TTTCTTAGATGAAAGTGCGA+GGG | + | chr7_3:80624958-80624977 | None:intergenic | 35.0% |
| !! | TTTTCTTAGATGAAAGTGCG+AGG | + | chr7_3:80624959-80624978 | None:intergenic | 35.0% |
| !!! | TTGACCATAGTTTGCTTTTC+TGG | - | chr7_3:80625006-80625025 | Msa1128720:intron | 35.0% |
| TTGACCAGAAAAGCAAACTA+TGG | + | chr7_3:80625013-80625032 | None:intergenic | 35.0% | |
| !!! | CTGCTTACAGTTTTGATTCA+AGG | + | chr7_3:80625051-80625070 | None:intergenic | 35.0% |
| CTTGAATCAAAACTGTAAGC+AGG | - | chr7_3:80625049-80625068 | Msa1128720:CDS | 35.0% | |
| !!! | CGATATCGTCTTTGTTTTCA+AGG | + | chr7_3:80625077-80625096 | None:intergenic | 35.0% |
| ATATTTATGGTGAAGCAGTG+CGG | - | chr7_3:80625305-80625324 | Msa1128720:intron | 35.0% | |
| ! | CCGTTTTCTGCAATTTTATG+AGG | + | chr7_3:80625336-80625355 | None:intergenic | 35.0% |
| !! | AAAACTGCAGCAGAAGTATT+TGG | + | chr7_3:80625403-80625422 | None:intergenic | 35.0% |
| ! | TTTTGATGCGTAATGGTTGT+TGG | - | chr7_3:80625419-80625438 | Msa1128720:intron | 35.0% |
| !! | AAATATCCCAAGTTCTGAGA+CGG | + | chr7_3:80625458-80625477 | None:intergenic | 35.0% |
| GACTTGAATTTGCAGGAATA+AGG | - | chr7_3:80625579-80625598 | Msa1128720:CDS | 35.0% | |
| GAATTTGCAGGAATAAGGAT+AGG | - | chr7_3:80625584-80625603 | Msa1128720:CDS | 35.0% | |
| GTTGTCGTGAATAATCAAAG+TGG | - | chr7_3:80625607-80625626 | Msa1128720:CDS | 35.0% | |
| AGAGGCAGACAAATATAAAC+AGG | + | chr7_3:80625790-80625809 | None:intergenic | 35.0% | |
| GCAAAAAATTGAAAGAAGGG+AGG | - | chr7_3:80625810-80625829 | Msa1128720:CDS | 35.0% | |
| GTAACTATACAACACACCAT+GGG | + | chr7_3:80625859-80625878 | None:intergenic | 35.0% | |
| TGTAACTATACAACACACCA+TGG | + | chr7_3:80625860-80625879 | None:intergenic | 35.0% | |
| CGATACGATGTTGAAGCAAT+AGG | - | chr7_3:80621028-80621047 | Msa1128720:three_prime_UTR | 40.0% | |
| GGAGGAATGTATTTGGACAA+AGG | + | chr7_3:80621106-80621125 | None:intergenic | 40.0% | |
| AGGAGAAGGAGGAATGTATT+TGG | + | chr7_3:80621113-80621132 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTGTGAGGAGGAGA+AGG | + | chr7_3:80621127-80621146 | None:intergenic | 40.0% |
| !!! | AGGTTGTTGTTTTTGTGAGG+AGG | + | chr7_3:80621133-80621152 | None:intergenic | 40.0% |
| TTCATCGCCATTAATGGTGA+TGG | + | chr7_3:80621239-80621258 | None:intergenic | 40.0% | |
| TAATCATCAGCGAATAGAGG+AGG | + | chr7_3:80621283-80621302 | None:intergenic | 40.0% | |
| GGTAAGATTTATCTCCCATG+AGG | + | chr7_3:80621378-80621397 | None:intergenic | 40.0% | |
| CATGGGAGATAAATCTTACC+AGG | - | chr7_3:80621378-80621397 | Msa1128720:intron | 40.0% | |
| ! | TTAGTCCATGTTTCTATCCG+TGG | - | chr7_3:80621585-80621604 | Msa1128720:CDS | 40.0% |
| AACTGTTGCAAAACTCACCA+CGG | + | chr7_3:80621605-80621624 | None:intergenic | 40.0% | |
| ! | TGGTGAGTTTTGCAACAGTT+TGG | - | chr7_3:80621605-80621624 | Msa1128720:CDS | 40.0% |
| ACGTTGGGAATAATGCAAAC+GGG | + | chr7_3:80621774-80621793 | None:intergenic | 40.0% | |
| GACGTTGGGAATAATGCAAA+CGG | + | chr7_3:80621775-80621794 | None:intergenic | 40.0% | |
| GCTTGCTTCCATTTACTTTC+TGG | + | chr7_3:80621802-80621821 | None:intergenic | 40.0% | |
| ATGGAAGCAAGCTTCTGATT+TGG | - | chr7_3:80621810-80621829 | Msa1128720:CDS | 40.0% | |
| ! | GTTGACCGTGTTAGTTTAGA+TGG | - | chr7_3:80621853-80621872 | Msa1128720:intron | 40.0% |
| ! | CCCTTTTCGTTTGTTTGGTT+TGG | - | chr7_3:80621965-80621984 | Msa1128720:intron | 40.0% |
| TCAATCCAGAACTAAGCAAG+TGG | - | chr7_3:80622071-80622090 | Msa1128720:intron | 40.0% | |
| TTTGTTGAGCTGTAGCATCT+TGG | + | chr7_3:80622130-80622149 | None:intergenic | 40.0% | |
| GCTACAGCTCAACAAAAAAG+AGG | - | chr7_3:80622134-80622153 | Msa1128720:intron | 40.0% | |
| CAGCTCAACAAAAAAGAGGT+CGG | - | chr7_3:80622138-80622157 | Msa1128720:intron | 40.0% | |
| AAAGAGGTCGGTAGCTATAT+TGG | - | chr7_3:80622150-80622169 | Msa1128720:intron | 40.0% | |
| CTCTTGTCACTCAACTTCAT+AGG | - | chr7_3:80622429-80622448 | Msa1128720:intron | 40.0% | |
| AGGTACATACTTTCTTGCCA+TGG | - | chr7_3:80622651-80622670 | Msa1128720:intron | 40.0% | |
| TCTTGCCATGGAAAATTGCT+TGG | - | chr7_3:80622663-80622682 | Msa1128720:intron | 40.0% | |
| ! | ATTCTGGCTGACAGCATTAT+TGG | + | chr7_3:80622712-80622731 | None:intergenic | 40.0% |
| ! | TTGTTTCTCGGATCTAACCT+GGG | + | chr7_3:80622774-80622793 | None:intergenic | 40.0% |
| ! | TTTGTTTCTCGGATCTAACC+TGG | + | chr7_3:80622775-80622794 | None:intergenic | 40.0% |
| CAGGGCTATCATTATGATTG+TGG | - | chr7_3:80622862-80622881 | Msa1128720:CDS | 40.0% | |
| GAACAGCAGAAAGAAAATGC+TGG | + | chr7_3:80622916-80622935 | None:intergenic | 40.0% | |
| GCTACCAAATGTGATATCAG+AGG | - | chr7_3:80623004-80623023 | Msa1128720:intron | 40.0% | |
| GGAACACTTTCTGTGTATGT+AGG | - | chr7_3:80623181-80623200 | Msa1128720:intron | 40.0% | |
| CAGTTGCAGTCATTTACTTC+AGG | - | chr7_3:80623304-80623323 | Msa1128720:intron | 40.0% | |
| GATCATACCAGGTAATTCAG+TGG | + | chr7_3:80623483-80623502 | None:intergenic | 40.0% | |
| TTGGTCACAAAGATCATACC+AGG | + | chr7_3:80623494-80623513 | None:intergenic | 40.0% | |
| ! | ACAGCAGTCAGTTCTTCTTT+TGG | + | chr7_3:80623513-80623532 | None:intergenic | 40.0% |
| AGCAATGAGAACTCATTGTC+AGG | + | chr7_3:80623920-80623939 | None:intergenic | 40.0% | |
| AGTTCTCATTGCTCATGCTT+TGG | - | chr7_3:80623927-80623946 | Msa1128720:CDS | 40.0% | |
| GTTCTCATTGCTCATGCTTT+GGG | - | chr7_3:80623928-80623947 | Msa1128720:CDS | 40.0% | |
| ! | GAGGGCTTTGATAAAAACGT+AGG | - | chr7_3:80624482-80624501 | Msa1128720:CDS | 40.0% |
| ! | GGCTTTGATAAAAACGTAGG+TGG | - | chr7_3:80624485-80624504 | Msa1128720:CDS | 40.0% |
| GTACAAGAAAAGGGGATAAC+CGG | + | chr7_3:80624736-80624755 | None:intergenic | 40.0% | |
| GAAGTATGAGTGTAGTTCCA+AGG | + | chr7_3:80624861-80624880 | None:intergenic | 40.0% | |
| AAAATGCGTGAATGCTTTGC+AGG | - | chr7_3:80625099-80625118 | Msa1128720:CDS | 40.0% | |
| TATTTATGGTGAAGCAGTGC+GGG | - | chr7_3:80625306-80625325 | Msa1128720:intron | 40.0% | |
| CAGCTTACATACTTATGCAG+AGG | - | chr7_3:80625371-80625390 | Msa1128720:intron | 40.0% | |
| GTCTCAGAACTTGGGATATT+TGG | - | chr7_3:80625457-80625476 | Msa1128720:intron | 40.0% | |
| ATATCATCATCTGACGAAGG+TGG | - | chr7_3:80625649-80625668 | Msa1128720:CDS | 40.0% | |
| TATCATCATCTGACGAAGGT+GGG | - | chr7_3:80625650-80625669 | Msa1128720:CDS | 40.0% | |
| ! | TAGAGCACCTCTAACTTATC+TGG | - | chr7_3:80625720-80625739 | Msa1128720:CDS | 40.0% |
| ! | AGAGCACCTCTAACTTATCT+GGG | - | chr7_3:80625721-80625740 | Msa1128720:CDS | 40.0% |
| CAGGAGGCTCAAATGATAAT+GGG | + | chr7_3:80625771-80625790 | None:intergenic | 40.0% | |
| ACAGGAGGCTCAAATGATAA+TGG | + | chr7_3:80625772-80625791 | None:intergenic | 40.0% | |
| GGCAGACAAATATAAACAGG+AGG | + | chr7_3:80625787-80625806 | None:intergenic | 40.0% | |
| CGATGTTGAAGCAATAGGCA+TGG | - | chr7_3:80621033-80621052 | Msa1128720:three_prime_UTR | 45.0% | |
| ! | TTTTTGTGAGGAGGAGAAGG+AGG | + | chr7_3:80621124-80621143 | None:intergenic | 45.0% |
| ACACCTGCCATCACCATTAA+TGG | - | chr7_3:80621229-80621248 | Msa1128720:CDS | 45.0% | |
| AGAAGAAGGAGAAGAAGACC+TGG | + | chr7_3:80621399-80621418 | None:intergenic | 45.0% | |
| ACTCACCACGGATAGAAACA+TGG | + | chr7_3:80621593-80621612 | None:intergenic | 45.0% | |
| CAGAAATCAGGAATGGTTCC+TGG | - | chr7_3:80621730-80621749 | Msa1128720:CDS | 45.0% | |
| CGTTGGGAATAATGCAAACG+GGG | + | chr7_3:80621773-80621792 | None:intergenic | 45.0% | |
| ! | GGTCACCCTTTTCGTTTGTT+TGG | - | chr7_3:80621960-80621979 | Msa1128720:intron | 45.0% |
| TTCGTCCACTTGCTTAGTTC+TGG | + | chr7_3:80622079-80622098 | None:intergenic | 45.0% | |
| ! | CCAGACCAAGCAATTTTCCA+TGG | + | chr7_3:80622671-80622690 | None:intergenic | 45.0% |
| CCATGGAAAATTGCTTGGTC+TGG | - | chr7_3:80622668-80622687 | Msa1128720:intron | 45.0% | |
| GCTTGGTCTGGATTCAGAAA+AGG | - | chr7_3:80622680-80622699 | Msa1128720:intron | 45.0% | |
| GGAGTGAGTATAATAACCCC+AGG | - | chr7_3:80622754-80622773 | Msa1128720:intron | 45.0% | |
| TGTTTCTCGGATCTAACCTG+GGG | + | chr7_3:80622773-80622792 | None:intergenic | 45.0% | |
| !! | TCCTTAGCTTTGAACACGCA+TGG | - | chr7_3:80623097-80623116 | Msa1128720:intron | 45.0% |
| ACCATGCGTGTTCAAAGCTA+AGG | + | chr7_3:80623101-80623120 | None:intergenic | 45.0% | |
| ATGGCAGAAGTTGACCAAGA+AGG | - | chr7_3:80623142-80623161 | Msa1128720:intron | 45.0% | |
| !! | TGGCCACTTACTGATTCTGA+AGG | + | chr7_3:80623354-80623373 | None:intergenic | 45.0% |
| GGTTAACCCACTGAATTACC+TGG | - | chr7_3:80623473-80623492 | Msa1128720:intron | 45.0% | |
| ATATGCAGGAATGGAGAGCT+AGG | - | chr7_3:80623964-80623983 | Msa1128720:CDS | 45.0% | |
| TGGCACCAAGAAGATTCAAC+AGG | - | chr7_3:80624043-80624062 | Msa1128720:CDS | 45.0% | |
| AGATACCTCTCAAGAACACC+TGG | + | chr7_3:80624080-80624099 | None:intergenic | 45.0% | |
| ! | CAAGCAGAAAAGCATAGGGT+CGG | + | chr7_3:80624408-80624427 | None:intergenic | 45.0% |
| ! | TGGCCAAGCAGAAAAGCATA+GGG | + | chr7_3:80624412-80624431 | None:intergenic | 45.0% |
| ! | ACGGAAGGTTTGGAATAGTG+AGG | - | chr7_3:80624463-80624482 | Msa1128720:intron | 45.0% |
| ! | CGGAAGGTTTGGAATAGTGA+GGG | - | chr7_3:80624464-80624483 | Msa1128720:intron | 45.0% |
| ACTGTGGAGTTTGGATGACT+CGG | - | chr7_3:80625122-80625141 | Msa1128720:CDS | 45.0% | |
| !! | GCTGCAGTTTTGATGCGTAA+TGG | - | chr7_3:80625412-80625431 | Msa1128720:intron | 45.0% |
| CGTAATGCTTAACATCCGCT+GGG | - | chr7_3:80625557-80625576 | Msa1128720:CDS | 45.0% | |
| ATCATCATCTGACGAAGGTG+GGG | - | chr7_3:80625651-80625670 | Msa1128720:CDS | 45.0% | |
| !! | TCGCCATTAATGGTGATGGC+AGG | + | chr7_3:80621235-80621254 | None:intergenic | 50.0% |
| TCATCAGCGAATAGAGGAGG+AGG | + | chr7_3:80621280-80621299 | None:intergenic | 50.0% | |
| CTTGTTTGGGCCTCTCTTCA+CGG | - | chr7_3:80621349-80621368 | Msa1128720:intron | 50.0% | |
| TCTCTTCACGGTCTCCTCAT+GGG | - | chr7_3:80621361-80621380 | Msa1128720:intron | 50.0% | |
| !! | ACCAAACGGTGATGGAGACA+TGG | + | chr7_3:80621493-80621512 | None:intergenic | 50.0% |
| ATCAGGAATGGTTCCTGGTG+TGG | - | chr7_3:80621735-80621754 | Msa1128720:CDS | 50.0% | |
| TCAGGAATGGTTCCTGGTGT+GGG | - | chr7_3:80621736-80621755 | Msa1128720:CDS | 50.0% | |
| TGGCTGACAGCATTATTGGC+AGG | + | chr7_3:80622708-80622727 | None:intergenic | 50.0% | |
| ! | CTCACTCCAAGCTTTAGCCA+AGG | + | chr7_3:80622742-80622761 | None:intergenic | 50.0% |
| GCAGTCATTTACTTCAGGGC+TGG | - | chr7_3:80623309-80623328 | Msa1128720:intron | 50.0% | |
| ! | GTTGATTGGTCGGTACAGCT+TGG | - | chr7_3:80623703-80623722 | Msa1128720:intron | 50.0% |
| ATGGAGAGCTAGGCTACTGA+TGG | - | chr7_3:80623974-80623993 | Msa1128720:CDS | 50.0% | |
| CAACAGGAACTTGCAAAGCC+AGG | - | chr7_3:80624059-80624078 | Msa1128720:intron | 50.0% | |
| CAAAGCCAGGTGTTCTTGAG+AGG | - | chr7_3:80624072-80624091 | Msa1128720:intron | 50.0% | |
| GAAGTGAGATCGCCTTCTTC+TGG | - | chr7_3:80624221-80624240 | Msa1128720:CDS | 50.0% | |
| ! | CGACCCTATGCTTTTCTGCT+TGG | - | chr7_3:80624406-80624425 | Msa1128720:intron | 50.0% |
| ! | CTGGCCAAGCAGAAAAGCAT+AGG | + | chr7_3:80624413-80624432 | None:intergenic | 50.0% |
| ! | CTTTTCTGCTTGGCCAGTAG+TGG | - | chr7_3:80624416-80624435 | Msa1128720:intron | 50.0% |
| ACGATGCATCTTGCCACTAC+TGG | + | chr7_3:80624432-80624451 | None:intergenic | 50.0% | |
| GTGAATGCTTTGCAGGACTG+TGG | - | chr7_3:80625106-80625125 | Msa1128720:CDS | 50.0% | |
| CTTTGCAGGACTGTGGAGTT+TGG | - | chr7_3:80625113-80625132 | Msa1128720:CDS | 50.0% | |
| GTAATGAAGCCCCAGAGAGA+AGG | - | chr7_3:80625183-80625202 | Msa1128720:intron | 50.0% | |
| AGTACCTCCTCCTTCTCTCT+GGG | + | chr7_3:80625196-80625215 | None:intergenic | 50.0% | |
| TAGTACCTCCTCCTTCTCTC+TGG | + | chr7_3:80625197-80625216 | None:intergenic | 50.0% | |
| GCGTAATGGTTGTTGGCACA+AGG | - | chr7_3:80625426-80625445 | Msa1128720:intron | 50.0% | |
| GCGTAATGCTTAACATCCGC+TGG | - | chr7_3:80625556-80625575 | Msa1128720:CDS | 50.0% | |
| CCTGCAAATTCAAGTCCCAG+CGG | + | chr7_3:80625575-80625594 | None:intergenic | 50.0% | |
| ! | GAGGTGCTCTACATCAAGTG+AGG | + | chr7_3:80625711-80625730 | None:intergenic | 50.0% |
| TCAGCGAATAGAGGAGGAGG+AGG | + | chr7_3:80621277-80621296 | None:intergenic | 55.0% | |
| CATGAGGAGACCGTGAAGAG+AGG | + | chr7_3:80621362-80621381 | None:intergenic | 55.0% | |
| CTCTCTTCACGGTCTCCTCA+TGG | - | chr7_3:80621360-80621379 | Msa1128720:intron | 55.0% | |
| GCCATGTCTCCATCACCGTT+TGG | - | chr7_3:80621489-80621508 | Msa1128720:CDS | 55.0% | |
| GCATGCATCAATCCCACACC+AGG | + | chr7_3:80621751-80621770 | None:intergenic | 55.0% | |
| ! | CCAAGCTTTAGCCAAGGCCT+CGG | + | chr7_3:80622736-80622755 | None:intergenic | 55.0% |
| ATGAAGCCCCAGAGAGAAGG+AGG | - | chr7_3:80625186-80625205 | Msa1128720:intron | 55.0% | |
| GTACCTCCTCCTTCTCTCTG+GGG | + | chr7_3:80625195-80625214 | None:intergenic | 55.0% | |
| ACCACGCCGTCTCAGAACTT+GGG | - | chr7_3:80625449-80625468 | Msa1128720:intron | 55.0% | |
| CCGCTGGGACTTGAATTTGC+AGG | - | chr7_3:80625572-80625591 | Msa1128720:CDS | 55.0% | |
| ! | GCTGCTGCTGCTTCTGCTTC+TGG | - | chr7_3:80621055-80621074 | Msa1128720:three_prime_UTR | 60.0% |
| TGCTGTCAGCCAGAATGCCG+AGG | - | chr7_3:80622716-80622735 | Msa1128720:intron | 60.0% | |
| TAGCCAAGGCCTCGGCATTC+TGG | + | chr7_3:80622728-80622747 | None:intergenic | 60.0% | |
| CCGAGGCCTTGGCTAAAGCT+TGG | - | chr7_3:80622733-80622752 | Msa1128720:intron | 60.0% | |
| AAGCCCCAGAGAGAAGGAGG+AGG | - | chr7_3:80625189-80625208 | Msa1128720:intron | 60.0% | |
| GACCACGCCGTCTCAGAACT+TGG | - | chr7_3:80625448-80625467 | Msa1128720:intron | 60.0% | |
| !! | TCCCAAGTTCTGAGACGGCG+TGG | + | chr7_3:80625453-80625472 | None:intergenic | 60.0% |
| CAGCCAGAATGCCGAGGCCT+TGG | - | chr7_3:80622722-80622741 | Msa1128720:intron | 65.0% | |
| GACGAAGGTGGGGTTGCAGC+TGG | - | chr7_3:80625661-80625680 | Msa1128720:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 80620995 | 80625933 | 80620995 | ID=Msa1128720;Name=Msa1128720 |
| chr7_3 | mRNA | 80620995 | 80625933 | 80620995 | ID=Msa1128720-mRNA-1;Parent=Msa1128720;Name=Msa1128720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.90|0.75|1|0.90|0.83|12|216|608 |
| chr7_3 | exon | 80620995 | 80621334 | 80620995 | ID=Msa1128720-mRNA-1:exon:23190;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80621437 | 80621629 | 80621437 | ID=Msa1128720-mRNA-1:exon:23189;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80621718 | 80621857 | 80621718 | ID=Msa1128720-mRNA-1:exon:23188;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80622835 | 80622956 | 80622835 | ID=Msa1128720-mRNA-1:exon:23187;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80623566 | 80623635 | 80623566 | ID=Msa1128720-mRNA-1:exon:23186;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80623734 | 80623837 | 80623734 | ID=Msa1128720-mRNA-1:exon:23185;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80623895 | 80624063 | 80623895 | ID=Msa1128720-mRNA-1:exon:23184;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80624153 | 80624275 | 80624153 | ID=Msa1128720-mRNA-1:exon:23183;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80624478 | 80624608 | 80624478 | ID=Msa1128720-mRNA-1:exon:23182;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80624773 | 80624848 | 80624773 | ID=Msa1128720-mRNA-1:exon:23181;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80625026 | 80625195 | 80625026 | ID=Msa1128720-mRNA-1:exon:23180;Parent=Msa1128720-mRNA-1 |
| chr7_3 | exon | 80625529 | 80625933 | 80625529 | ID=Msa1128720-mRNA-1:exon:23179;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80625529 | 80625933 | 80625529 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80625026 | 80625195 | 80625026 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80624773 | 80624848 | 80624773 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80624478 | 80624608 | 80624478 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80624153 | 80624275 | 80624153 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80623895 | 80624063 | 80623895 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80623734 | 80623837 | 80623734 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80623566 | 80623635 | 80623566 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80622835 | 80622956 | 80622835 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80621718 | 80621857 | 80621718 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80621437 | 80621629 | 80621437 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | CDS | 80621211 | 80621334 | 80621211 | ID=Msa1128720-mRNA-1:cds;Parent=Msa1128720-mRNA-1 |
| chr7_3 | three_prime_UTR | 80620995 | 80621210 | 80620995 | ID=Msa1128720-mRNA-1:three_prime_utr;Parent=Msa1128720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
