Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435530 | XP_003604042.1 | 86.811 | 417 | 37 | 8 | 1 | 404 | 1 | 412 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435530 | sp|Q5EAW4|MCM10_XENLA | 29.252 | 147 | 100 | 3 | 63 | 205 | 221 | 367 | 1.45e-14 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435530 | G7J8I4 | 86.811 | 417 | 37 | 8 | 1 | 404 | 1 | 412 | 0.0 | 684 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020540 | Msa1435530 | 0.829775 | 4.262995e-55 | -8.615850e-47 |
| Msa1364950 | Msa1435530 | 0.979862 | 6.580029e-149 | -8.615850e-47 |
| Msa1381470 | Msa1435530 | 0.808450 | 3.078592e-50 | -8.615850e-47 |
| Msa1417580 | Msa1435530 | 0.932351 | 9.702140e-95 | -8.615850e-47 |
| Msa1435530 | Msa1465360 | 0.832267 | 1.042309e-55 | -8.615850e-47 |
| Msa0681050 | Msa1435530 | 0.807016 | 6.209018e-50 | -8.615850e-47 |
| Msa0803350 | Msa1435530 | 0.825405 | 4.771562e-54 | -8.615850e-47 |
| Msa0841700 | Msa1435530 | 0.814944 | 1.190061e-51 | -8.615850e-47 |
| Msa0159590 | Msa1435530 | 0.824423 | 8.138603e-54 | -8.615850e-47 |
| Msa0159620 | Msa1435530 | 0.829351 | 5.403123e-55 | -8.615850e-47 |
| Msa1338210 | Msa1435530 | 0.813629 | 2.323608e-51 | -8.615850e-47 |
| Msa0367150 | Msa1435530 | 0.802888 | 4.529891e-49 | -8.615850e-47 |
| Msa0373500 | Msa1435530 | 0.817538 | 3.130908e-52 | -8.615850e-47 |
| Msa0454560 | Msa1435530 | 0.820110 | 8.157356e-53 | -8.615850e-47 |
| Msa0462780 | Msa1435530 | 0.806763 | 7.024711e-50 | -8.615850e-47 |
| Msa0468620 | Msa1435530 | 0.826392 | 2.781883e-54 | -8.615850e-47 |
| Msa0989370 | Msa1435530 | 0.825455 | 4.643952e-54 | -8.615850e-47 |
| Msa1183740 | Msa1435530 | 0.825569 | 4.363909e-54 | -8.615850e-47 |
| Msa1218820 | Msa1435530 | 0.804702 | 1.902538e-49 | -8.615850e-47 |
| Msa0502510 | Msa1435530 | 0.801233 | 9.919930e-49 | -8.615850e-47 |
| Msa0514500 | Msa1435530 | 0.826595 | 2.488834e-54 | -8.615850e-47 |
| Msa0521680 | Msa1435530 | 0.802337 | 5.884095e-49 | -8.615850e-47 |
| Msa0524280 | Msa1435530 | 0.945173 | 5.004682e-104 | -8.615850e-47 |
| Msa0524390 | Msa1435530 | 0.930323 | 1.934895e-93 | -8.615850e-47 |
| Msa0545920 | Msa1435530 | 0.801351 | 9.380331e-49 | -8.615850e-47 |
| Msa0593400 | Msa1435530 | 0.800919 | 1.150010e-48 | -8.615850e-47 |
| Msa0601720 | Msa1435530 | 0.802758 | 4.819157e-49 | -8.615850e-47 |
| Msa0888790 | Msa1435530 | 0.817988 | 2.478286e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435530 | MtrunA17_Chr3g0145611 | 86.811 | 417 | 37 | 8 | 1 | 404 | 1 | 412 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435530 | AT2G20980.1 | 48.139 | 403 | 170 | 10 | 17 | 403 | 17 | 396 | 3.93e-100 | 303 |
Find 128 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGATCATTTGGAGTCTT+TGG | 0.125778 | tig0027707:-23137 | None:intergenic |
| GGAGAAGCGGGAGGGGTTTC+AGG | 0.144299 | tig0027707:-20631 | None:intergenic |
| AGGGGTTTGGTAATGGATTT+AGG | 0.166281 | tig0027707:-20775 | None:intergenic |
| GAAATCATCTTCTGTTAATA+TGG | 0.187113 | tig0027707:+23278 | Msa1435530:CDS |
| TGCTTTCTGCCATAAGTTAT+AGG | 0.239694 | tig0027707:-22557 | None:intergenic |
| TTGGTAATGGATTTAGGGTT+AGG | 0.247428 | tig0027707:-20769 | None:intergenic |
| AGTGAACCTTCGAAACTATA+TGG | 0.258865 | tig0027707:-23555 | None:intergenic |
| CATATGGAAAATTGGTTCTT+TGG | 0.260862 | tig0027707:+21111 | Msa1435530:CDS |
| CTCTGTTCTCTTGTCGATTA+CGG | 0.265636 | tig0027707:+21378 | Msa1435530:CDS |
| TTTATTTCTCTTAGTTATAT+TGG | 0.272528 | tig0027707:+23629 | Msa1435530:three_prime_UTR |
| AGCTATTGCATATGGAAAAT+TGG | 0.275020 | tig0027707:+21103 | Msa1435530:CDS |
| CATCTTGCCTGTACTCTTTG+TGG | 0.306180 | tig0027707:-23379 | None:intergenic |
| GTAGATAACCTAGTAAAATT+TGG | 0.307826 | tig0027707:-23663 | None:intergenic |
| GAAACTTAAGAACAGCATTT+AGG | 0.310137 | tig0027707:+22720 | Msa1435530:intron |
| GGATTTAGGGTTAGGGTTAG+AGG | 0.317608 | tig0027707:-20761 | None:intergenic |
| CTCTTAGTTATATTGGTAGT+AGG | 0.320201 | tig0027707:+23636 | Msa1435530:three_prime_UTR |
| GTGCATTTGCTTTGATCATT+TGG | 0.328321 | tig0027707:-23146 | None:intergenic |
| ACCAGAGAATTTGTCAAGTT+GGG | 0.333949 | tig0027707:-20809 | None:intergenic |
| TCTGTGTATATTCAGGAATT+TGG | 0.341989 | tig0027707:+20994 | Msa1435530:intron |
| GATATTGCATCTTCAAGGTT+AGG | 0.353140 | tig0027707:-21355 | None:intergenic |
| AGATTTCTTTCTGAGATTGC+AGG | 0.358419 | tig0027707:+22987 | Msa1435530:CDS |
| GGGGTTTGGTAATGGATTTA+GGG | 0.358994 | tig0027707:-20774 | None:intergenic |
| ATCCACTAACCTATAACTTA+TGG | 0.367477 | tig0027707:+22548 | Msa1435530:CDS |
| AGGGTTAGGGTTAGAGGGTT+GGG | 0.369684 | tig0027707:-20755 | None:intergenic |
| GTGTATCAAAGAAAAGAAAA+AGG | 0.374356 | tig0027707:+20554 | Msa1435530:five_prime_UTR |
| GGGATCGTCGGTGAGGGGTT+TGG | 0.378542 | tig0027707:-20788 | None:intergenic |
| ATTCAGAAAACAAGTTCAAA+TGG | 0.379635 | tig0027707:+21076 | Msa1435530:CDS |
| AACTTATTATTTAAAACAGT+TGG | 0.380158 | tig0027707:+23804 | Msa1435530:three_prime_UTR |
| TGCCATAAGTTATAGGTTAG+TGG | 0.382941 | tig0027707:-22550 | None:intergenic |
| TTCTTTATTGTGCAGGACTT+TGG | 0.384179 | tig0027707:-23606 | None:intergenic |
| GTGAATGGAGATTCTTTCTC+TGG | 0.384793 | tig0027707:+21016 | Msa1435530:CDS |
| GTCGGTGAGGGGTTTGGTAA+TGG | 0.386273 | tig0027707:-20782 | None:intergenic |
| GAGATTCTTTCTCTGGAAGT+TGG | 0.388819 | tig0027707:+21023 | Msa1435530:CDS |
| TATCTACATTGTTATCAGTT+GGG | 0.389092 | tig0027707:+23679 | Msa1435530:three_prime_UTR |
| TGAATTAGATCTTATTAGTT+CGG | 0.393103 | tig0027707:+23404 | Msa1435530:CDS |
| GACCAGAGAATTTGTCAAGT+TGG | 0.402451 | tig0027707:-20810 | None:intergenic |
| GTCGTCAAACCACGAAGATC+TGG | 0.403762 | tig0027707:+20579 | Msa1435530:CDS |
| GTTTAACCCCTGCTGAGCTT+AGG | 0.407094 | tig0027707:+20851 | Msa1435530:CDS |
| GTCAATGAATATATCATTCA+AGG | 0.409842 | tig0027707:+23768 | Msa1435530:three_prime_UTR |
| TCTGGAAGTTGGGTCACTGT+TGG | 0.427782 | tig0027707:+21034 | Msa1435530:CDS |
| TTTAACCCCTGCTGAGCTTA+GGG | 0.429241 | tig0027707:+20852 | Msa1435530:CDS |
| TTGAACGGCGTCTCTGAAAA+CGG | 0.430849 | tig0027707:-20719 | None:intergenic |
| AAATAAATTCTTTATTGTGC+AGG | 0.432010 | tig0027707:-23613 | None:intergenic |
| AGATTCTTTCTCTGGAAGTT+GGG | 0.432795 | tig0027707:+21024 | Msa1435530:CDS |
| ATATTGCATCTTCAAGGTTA+GGG | 0.435809 | tig0027707:-21354 | None:intergenic |
| AAAGACAGAGAGGCAAGGTT+TGG | 0.444726 | tig0027707:+23347 | Msa1435530:CDS |
| GATTTAGGGTTAGGGTTAGA+GGG | 0.445132 | tig0027707:-20760 | None:intergenic |
| TAGGGTTAGGGTTAGAGGGT+TGG | 0.445470 | tig0027707:-20756 | None:intergenic |
| TCTCTTGTCGATTACGGTTG+CGG | 0.449072 | tig0027707:+21384 | Msa1435530:CDS |
| TGGTAATGGATTTAGGGTTA+GGG | 0.451006 | tig0027707:-20768 | None:intergenic |
| ATGGGAAGAGCTATTGCATA+TGG | 0.459558 | tig0027707:+21095 | Msa1435530:CDS |
| CCCCAACTTGACAAATTCTC+TGG | 0.465454 | tig0027707:+20808 | Msa1435530:CDS |
| CGGAGAAGGAGAAGCGGGAG+GGG | 0.466441 | tig0027707:-20638 | None:intergenic |
| AAGTTGGGGATCGTCGGTGA+GGG | 0.467511 | tig0027707:-20794 | None:intergenic |
| TCTTAGTTATATTGGTAGTA+GGG | 0.467662 | tig0027707:+23637 | Msa1435530:three_prime_UTR |
| AAATCATCTTCTGTTAATAT+GGG | 0.469854 | tig0027707:+23279 | Msa1435530:CDS |
| AACACAACACACGATGACTT+TGG | 0.476542 | tig0027707:-20531 | None:intergenic |
| ACAGATTCCCTAAGCTCAGC+AGG | 0.478207 | tig0027707:-20859 | None:intergenic |
| ATCTACATTGTTATCAGTTG+GGG | 0.484820 | tig0027707:+23680 | Msa1435530:three_prime_UTR |
| TCTCTGAAAACGGACATATC+AGG | 0.488594 | tig0027707:-20709 | None:intergenic |
| CAGAGGATATTGCATCTTCA+AGG | 0.493162 | tig0027707:-21360 | None:intergenic |
| ATCAAGCGGAGAAGGAGAAG+CGG | 0.493496 | tig0027707:-20644 | None:intergenic |
| TGAATATATCATTCAAGGGT+TGG | 0.494428 | tig0027707:+23773 | Msa1435530:three_prime_UTR |
| TTATCTACATTGTTATCAGT+TGG | 0.496099 | tig0027707:+23678 | Msa1435530:three_prime_UTR |
| TCAAGCGGAGAAGGAGAAGC+GGG | 0.501964 | tig0027707:-20643 | None:intergenic |
| TTCAGAAAACAAGTTCAAAT+GGG | 0.504697 | tig0027707:+21077 | Msa1435530:CDS |
| GCGGAGAAGGAGAAGCGGGA+GGG | 0.505756 | tig0027707:-20639 | None:intergenic |
| TCTGACTTGAGATAATCTCT+TGG | 0.522461 | tig0027707:-22743 | None:intergenic |
| ATATTCAGGAATTTGGTGAA+TGG | 0.526400 | tig0027707:+21001 | Msa1435530:intron |
| AGCAGGGGTTAAACATTGGT+TGG | 0.526618 | tig0027707:-20842 | None:intergenic |
| GTGAACCTTCGAAACTATAT+GGG | 0.530499 | tig0027707:-23554 | None:intergenic |
| TAGTGCCCATATAGTTTCGA+AGG | 0.533679 | tig0027707:+23549 | Msa1435530:three_prime_UTR |
| AAGAAAGAATACTTAATGAC+GGG | 0.535205 | tig0027707:-20907 | None:intergenic |
| TGCTGTGTCTTACAAGCATA+GGG | 0.539214 | tig0027707:+20681 | Msa1435530:CDS |
| CACTGTACGAACTGAACTCA+AGG | 0.539230 | tig0027707:+22594 | Msa1435530:CDS |
| AAGAAAATAAATACTACCGC+GGG | 0.542071 | tig0027707:+23497 | Msa1435530:three_prime_UTR |
| ATGCTGTGTCTTACAAGCAT+AGG | 0.543398 | tig0027707:+20680 | Msa1435530:CDS |
| TACTGTCCGCAAGGATGCCA+AGG | 0.550767 | tig0027707:+21225 | Msa1435530:CDS |
| TCAATGAATATATCATTCAA+GGG | 0.551217 | tig0027707:+23769 | Msa1435530:three_prime_UTR |
| GTTGGAGTGTTAACTGAGAA+GGG | 0.555349 | tig0027707:+21052 | Msa1435530:CDS |
| TCATCAGCATCAAGCGGAGA+AGG | 0.555395 | tig0027707:-20652 | None:intergenic |
| TAAATACTACCGCGGGGTGG+TGG | 0.556114 | tig0027707:+23504 | Msa1435530:three_prime_UTR |
| GAAGAAAGAATACTTAATGA+CGG | 0.559482 | tig0027707:-20908 | None:intergenic |
| CCAGAGAATTTGTCAAGTTG+GGG | 0.563311 | tig0027707:-20808 | None:intergenic |
| TTTGTCAAGTTGGGGATCGT+CGG | 0.563964 | tig0027707:-20800 | None:intergenic |
| TGTTGGAGTGTTAACTGAGA+AGG | 0.564287 | tig0027707:+21051 | Msa1435530:CDS |
| CAAGTTGGGGATCGTCGGTG+AGG | 0.565523 | tig0027707:-20795 | None:intergenic |
| AGTTGGGGATCGTCGGTGAG+GGG | 0.571103 | tig0027707:-20793 | None:intergenic |
| GATAAAGCCACAAAGAGTAC+AGG | 0.574304 | tig0027707:+23372 | Msa1435530:CDS |
| CTCTGTCGTGAAGAGAAAGC+AGG | 0.575382 | tig0027707:-20606 | None:intergenic |
| GCAGGAGATCCAGATCTTCG+TGG | 0.577212 | tig0027707:-20588 | None:intergenic |
| TCAGAGGAACTGTCAAGAGA+AGG | 0.578844 | tig0027707:+21174 | Msa1435530:CDS |
| ATCTGTGGATGGTATCAGAA+AGG | 0.579951 | tig0027707:+22835 | Msa1435530:CDS |
| AGATCTTATTAGTTCGGACG+AGG | 0.580223 | tig0027707:+23410 | Msa1435530:CDS |
| GTGAAATTGTTATCTGTGGA+TGG | 0.582479 | tig0027707:+22824 | Msa1435530:CDS |
| AGCGGAGAAGGAGAAGCGGG+AGG | 0.584047 | tig0027707:-20640 | None:intergenic |
| TGTCATAAGAAACCAGCAGT+TGG | 0.585566 | tig0027707:+23311 | Msa1435530:CDS |
| GCTCAGCAGGGGTTAAACAT+TGG | 0.588791 | tig0027707:-20846 | None:intergenic |
| AGAATTGAAGAGTGCAAAGA+CGG | 0.594442 | tig0027707:-21203 | None:intergenic |
| AGAGATTATCTCAAGTCAGA+AGG | 0.595620 | tig0027707:+22746 | Msa1435530:CDS |
| AAGAATACTTAATGACGGGT+AGG | 0.598971 | tig0027707:-20903 | None:intergenic |
| CTTGAGTTCAGTTCGTACAG+TGG | 0.599594 | tig0027707:-22593 | None:intergenic |
| GCAAGTGAAATTGTTATCTG+TGG | 0.600173 | tig0027707:+22820 | Msa1435530:CDS |
| ACAACAGCTTCACACTCGCA+AGG | 0.603557 | tig0027707:+22960 | Msa1435530:CDS |
| CTTCAATTCTACTGTCCGCA+AGG | 0.606230 | tig0027707:+21216 | Msa1435530:CDS |
| TGTTTGGTAATGCTTATCAG+AGG | 0.614875 | tig0027707:+21158 | Msa1435530:CDS |
| CAACAGCTTCACACTCGCAA+GGG | 0.617797 | tig0027707:+22961 | Msa1435530:CDS |
| TTTCGACGGACAACAAGGGA+GGG | 0.619606 | tig0027707:-20473 | None:intergenic |
| ATATATCATTCAAGGGTTGG+TGG | 0.622516 | tig0027707:+23776 | Msa1435530:three_prime_UTR |
| AGGAACTGTCAAGAGAAGGA+AGG | 0.627697 | tig0027707:+21178 | Msa1435530:CDS |
| AAAGCAAATGCACAGCGAAG+AGG | 0.629693 | tig0027707:+23156 | Msa1435530:CDS |
| TTGGAGTGTTAACTGAGAAG+GGG | 0.630678 | tig0027707:+21053 | Msa1435530:CDS |
| TACGAACTGAACTCAAGGGA+GGG | 0.632715 | tig0027707:+22599 | Msa1435530:CDS |
| CAGATTCCCTAAGCTCAGCA+GGG | 0.634673 | tig0027707:-20858 | None:intergenic |
| TCGTCATCATCAGCATCAAG+CGG | 0.640174 | tig0027707:-20658 | None:intergenic |
| ATGGTATCAGAAAGGCATTG+AGG | 0.644692 | tig0027707:+22843 | Msa1435530:CDS |
| TATTGCATCTTCAAGGTTAG+GGG | 0.644814 | tig0027707:-21353 | None:intergenic |
| AGAGTAAAGACAGAGAGGCA+AGG | 0.646421 | tig0027707:+23342 | Msa1435530:CDS |
| AATATACCTTGGCATCCTTG+CGG | 0.655962 | tig0027707:-21231 | None:intergenic |
| TTAAAAGAGTAAAGACAGAG+AGG | 0.656016 | tig0027707:+23337 | Msa1435530:CDS |
| GTACGAACTGAACTCAAGGG+AGG | 0.674064 | tig0027707:+22598 | Msa1435530:CDS |
| GGTATGAAGACAATCTTGAA+CGG | 0.675223 | tig0027707:-20734 | None:intergenic |
| AGATTCCCTAAGCTCAGCAG+GGG | 0.676546 | tig0027707:-20857 | None:intergenic |
| GAAGAAAATAAATACTACCG+CGG | 0.677777 | tig0027707:+23496 | Msa1435530:three_prime_UTR |
| ACTGTACGAACTGAACTCAA+GGG | 0.685568 | tig0027707:+22595 | Msa1435530:CDS |
| AAATAAATACTACCGCGGGG+TGG | 0.707092 | tig0027707:+23501 | Msa1435530:three_prime_UTR |
| CGTAATCGACAAGAGAACAG+AGG | 0.710432 | tig0027707:-21377 | None:intergenic |
| AGAAAATAAATACTACCGCG+GGG | 0.751461 | tig0027707:+23498 | Msa1435530:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATATGAAATAATTAAA+TGG | - | tig0027707:22498-22517 | None:intergenic | 10.0% |
| !!! | TTATTTTGATTATTTAACTG+TGG | + | tig0027707:21470-21489 | Msa1435530:intron | 15.0% |
| !! | TTTACGTCTATTAATAAATA+TGG | - | tig0027707:21916-21935 | None:intergenic | 15.0% |
| !! | CTTTACAAAAGTAATAAAAA+GGG | - | tig0027707:22275-22294 | None:intergenic | 15.0% |
| !! | ACTTTACAAAAGTAATAAAA+AGG | - | tig0027707:22276-22295 | None:intergenic | 15.0% |
| !!! | TTTATTTCTCTTAGTTATAT+TGG | + | tig0027707:23629-23648 | Msa1435530:three_prime_UTR | 15.0% |
| !!! | AACTTATTATTTAAAACAGT+TGG | + | tig0027707:23804-23823 | Msa1435530:three_prime_UTR | 15.0% |
| !! | AAATAAAAAAGAGATTTCAG+AGG | - | tig0027707:21290-21309 | None:intergenic | 20.0% |
| !! | AAATTGCATATACAATGATT+GGG | - | tig0027707:21536-21555 | None:intergenic | 20.0% |
| !! | TAAATTGCATATACAATGAT+TGG | - | tig0027707:21537-21556 | None:intergenic | 20.0% |
| !! | TTAATAGACGTAAAACTATA+TGG | + | tig0027707:21922-21941 | Msa1435530:intron | 20.0% |
| !!! | AGAAAAACTAAACTTTGAAA+TGG | + | tig0027707:21982-22001 | Msa1435530:intron | 20.0% |
| !!! | TATTACTTTTGTAAAGTTTG+AGG | + | tig0027707:22078-22097 | Msa1435530:intron | 20.0% |
| !!! | ATTACTTTTGTAAAGTTTGA+GGG | + | tig0027707:22079-22098 | Msa1435530:intron | 20.0% |
| !!! | CTTTTATAAGAACTTGAAAT+AGG | - | tig0027707:22635-22654 | None:intergenic | 20.0% |
| !!! | AGACTAACTGTTAATTTTAA+TGG | + | tig0027707:23015-23034 | Msa1435530:intron | 20.0% |
| !! | GATAATAAATAACATGTAAC+AGG | - | tig0027707:23253-23272 | None:intergenic | 20.0% |
| !!! | ACATGTTATTTATTATCTTC+AGG | + | tig0027707:23256-23275 | Msa1435530:intron | 20.0% |
| !! | AAATCATCTTCTGTTAATAT+GGG | + | tig0027707:23279-23298 | Msa1435530:CDS | 20.0% |
| !! | TGAATTAGATCTTATTAGTT+CGG | + | tig0027707:23404-23423 | Msa1435530:CDS | 20.0% |
| !! | AAATAAATTCTTTATTGTGC+AGG | - | tig0027707:23616-23635 | None:intergenic | 20.0% |
| !!! | TACTTAACTTATCTTTTGAA+AGG | - | tig0027707:23745-23764 | None:intergenic | 20.0% |
| !! | TCAATGAATATATCATTCAA+GGG | + | tig0027707:23769-23788 | Msa1435530:three_prime_UTR | 20.0% |
| !!! | ACTTTGGTTAGTTTTGTTTA+GGG | - | tig0027707:20518-20537 | None:intergenic | 25.0% |
| ! | GTGTATCAAAGAAAAGAAAA+AGG | + | tig0027707:20554-20573 | Msa1435530:five_prime_UTR | 25.0% |
| ! | AAGAAAGAATACTTAATGAC+GGG | - | tig0027707:20910-20929 | None:intergenic | 25.0% |
| ! | GAAGAAAGAATACTTAATGA+CGG | - | tig0027707:20911-20930 | None:intergenic | 25.0% |
| ! | ATTCAGAAAACAAGTTCAAA+TGG | + | tig0027707:21076-21095 | Msa1435530:CDS | 25.0% |
| ! | TTCAGAAAACAAGTTCAAAT+GGG | + | tig0027707:21077-21096 | Msa1435530:CDS | 25.0% |
| !!! | ACTATTTCTCTTTTCTTGTT+TGG | + | tig0027707:21142-21161 | Msa1435530:CDS | 25.0% |
| !!! | TTTATTTCTCTTGCTTTTGA+AGG | + | tig0027707:21303-21322 | Msa1435530:intron | 25.0% |
| !!! | TTATTTCTCTTGCTTTTGAA+GGG | + | tig0027707:21304-21323 | Msa1435530:intron | 25.0% |
| ! | TTGTATATGCAATTTACCAA+AGG | + | tig0027707:21541-21560 | Msa1435530:intron | 25.0% |
| ! | ATCAGACTTATTTCAGTAAA+TGG | - | tig0027707:21631-21650 | None:intergenic | 25.0% |
| ! | ATAAGTCTGATTTAAATGTG+TGG | + | tig0027707:21640-21659 | Msa1435530:intron | 25.0% |
| ! | GGTGACAAATAAAATAAAAG+AGG | + | tig0027707:21728-21747 | Msa1435530:intron | 25.0% |
| !! | GCAATCTATAAGTCTTATAT+TGG | + | tig0027707:21944-21963 | Msa1435530:intron | 25.0% |
| !!! | TTACTTTTGTAAAGTTTGAG+GGG | + | tig0027707:22080-22099 | Msa1435530:intron | 25.0% |
| ! | AGAAACAGAATAATAATCCT+GGG | - | tig0027707:22310-22329 | None:intergenic | 25.0% |
| ! | TGTAAGAAGAAAAAGAAACA+TGG | - | tig0027707:22370-22389 | None:intergenic | 25.0% |
| ! | CCTGAAATAACAAAGATTAA+TGG | - | tig0027707:22435-22454 | None:intergenic | 25.0% |
| !!! | CCATTAATCTTTGTTATTTC+AGG | + | tig0027707:22432-22451 | Msa1435530:intron | 25.0% |
| !!! | TTTTGATTTCATATGACATG+TGG | + | tig0027707:22666-22685 | Msa1435530:intron | 25.0% |
| !!! | CTTTTTCAAGTTTGTTTTGT+CGG | - | tig0027707:22795-22814 | None:intergenic | 25.0% |
| !!! | GGTTCTTTTTTCATCATTTT+TGG | - | tig0027707:23119-23138 | None:intergenic | 25.0% |
| ! | GAAATCATCTTCTGTTAATA+TGG | + | tig0027707:23278-23297 | Msa1435530:CDS | 25.0% |
| !! | TCTTAGTTATATTGGTAGTA+GGG | + | tig0027707:23637-23656 | Msa1435530:three_prime_UTR | 25.0% |
| ! | GTAGATAACCTAGTAAAATT+TGG | - | tig0027707:23666-23685 | None:intergenic | 25.0% |
| ! | TTATCTACATTGTTATCAGT+TGG | + | tig0027707:23678-23697 | Msa1435530:three_prime_UTR | 25.0% |
| ! | TATCTACATTGTTATCAGTT+GGG | + | tig0027707:23679-23698 | Msa1435530:three_prime_UTR | 25.0% |
| ! | GTCAATGAATATATCATTCA+AGG | + | tig0027707:23768-23787 | Msa1435530:three_prime_UTR | 25.0% |
| !!! | GACTTTGGTTAGTTTTGTTT+AGG | - | tig0027707:20519-20538 | None:intergenic | 30.0% |
| TCTGTGTATATTCAGGAATT+TGG | + | tig0027707:20994-21013 | Msa1435530:intron | 30.0% | |
| ! | ATATTCAGGAATTTGGTGAA+TGG | + | tig0027707:21001-21020 | Msa1435530:intron | 30.0% |
| AGCTATTGCATATGGAAAAT+TGG | + | tig0027707:21103-21122 | Msa1435530:CDS | 30.0% | |
| ! | CATATGGAAAATTGGTTCTT+TGG | + | tig0027707:21111-21130 | Msa1435530:CDS | 30.0% |
| AGATGATAAGGAATATACCT+TGG | - | tig0027707:21245-21264 | None:intergenic | 30.0% | |
| AAAAATGGAAGCAGATGATA+AGG | - | tig0027707:21257-21276 | None:intergenic | 30.0% | |
| ATATTGCATCTTCAAGGTTA+GGG | - | tig0027707:21357-21376 | None:intergenic | 30.0% | |
| TTTAACTGTGGAATTGCAAT+AGG | + | tig0027707:21482-21501 | Msa1435530:intron | 30.0% | |
| CTGATTTAAATGTGTGGAAT+TGG | + | tig0027707:21646-21665 | Msa1435530:intron | 30.0% | |
| CAGATGTGAATTATGATTCA+TGG | - | tig0027707:21809-21828 | None:intergenic | 30.0% | |
| !!! | GAAAGCTCAATCTTGTTTTT+AGG | + | tig0027707:22004-22023 | Msa1435530:intron | 30.0% |
| CTTTGTATATTCCCTTAAAC+TGG | - | tig0027707:22032-22051 | None:intergenic | 30.0% | |
| ATAATAATCCTGGGACATAA+TGG | - | tig0027707:22301-22320 | None:intergenic | 30.0% | |
| CAGAAACAGAATAATAATCC+TGG | - | tig0027707:22311-22330 | None:intergenic | 30.0% | |
| !! | GAAAAGTATTAATCGAAGTC+TGG | - | tig0027707:22339-22358 | None:intergenic | 30.0% |
| AAAAAGAAACATGGTTGACA+AGG | - | tig0027707:22361-22380 | None:intergenic | 30.0% | |
| ATCCACTAACCTATAACTTA+TGG | + | tig0027707:22548-22567 | Msa1435530:CDS | 30.0% | |
| GAAACTTAAGAACAGCATTT+AGG | + | tig0027707:22720-22739 | Msa1435530:intron | 30.0% | |
| TTAAAAGAGTAAAGACAGAG+AGG | + | tig0027707:23337-23356 | Msa1435530:CDS | 30.0% | |
| GAAGAAAATAAATACTACCG+CGG | + | tig0027707:23496-23515 | Msa1435530:three_prime_UTR | 30.0% | |
| AAGAAAATAAATACTACCGC+GGG | + | tig0027707:23497-23516 | Msa1435530:three_prime_UTR | 30.0% | |
| ! | CTCTTAGTTATATTGGTAGT+AGG | + | tig0027707:23636-23655 | Msa1435530:three_prime_UTR | 30.0% |
| ! | TAGGGATACCAAATTTTACT+AGG | + | tig0027707:23655-23674 | Msa1435530:three_prime_UTR | 30.0% |
| ATCTACATTGTTATCAGTTG+GGG | + | tig0027707:23680-23699 | Msa1435530:three_prime_UTR | 30.0% | |
| TGAATATATCATTCAAGGGT+TGG | + | tig0027707:23773-23792 | Msa1435530:three_prime_UTR | 30.0% | |
| !! | GTTTTCAAGCTGATTTTCGA+CGG | - | tig0027707:20490-20509 | None:intergenic | 35.0% |
| GGTATGAAGACAATCTTGAA+CGG | - | tig0027707:20737-20756 | None:intergenic | 35.0% | |
| !! | TGGTAATGGATTTAGGGTTA+GGG | - | tig0027707:20771-20790 | None:intergenic | 35.0% |
| !! | TTGGTAATGGATTTAGGGTT+AGG | - | tig0027707:20772-20791 | None:intergenic | 35.0% |
| ACCAGAGAATTTGTCAAGTT+GGG | - | tig0027707:20812-20831 | None:intergenic | 35.0% | |
| !! | AAGAATACTTAATGACGGGT+AGG | - | tig0027707:20906-20925 | None:intergenic | 35.0% |
| GATTCTGTCTGTGTATATTC+AGG | + | tig0027707:20987-21006 | Msa1435530:intron | 35.0% | |
| ! | AGATTCTTTCTCTGGAAGTT+GGG | + | tig0027707:21024-21043 | Msa1435530:CDS | 35.0% |
| !! | TGTTTGGTAATGCTTATCAG+AGG | + | tig0027707:21158-21177 | Msa1435530:CDS | 35.0% |
| ! | AGAATTGAAGAGTGCAAAGA+CGG | - | tig0027707:21206-21225 | None:intergenic | 35.0% |
| TATTGCATCTTCAAGGTTAG+GGG | - | tig0027707:21356-21375 | None:intergenic | 35.0% | |
| GATATTGCATCTTCAAGGTT+AGG | - | tig0027707:21358-21377 | None:intergenic | 35.0% | |
| GTAGTTACTCTTTACTCCTT+TGG | - | tig0027707:21560-21579 | None:intergenic | 35.0% | |
| ! | TTGATAGCCATTCAATAGCT+TGG | + | tig0027707:21776-21795 | Msa1435530:intron | 35.0% |
| !!! | TGTTTTTAGGTGCCAGTTTA+AGG | + | tig0027707:22017-22036 | Msa1435530:intron | 35.0% |
| !!! | GTTTTTAGGTGCCAGTTTAA+GGG | + | tig0027707:22018-22037 | Msa1435530:intron | 35.0% |
| TAAAGTTGTTGTCATGTGAC+TGG | + | tig0027707:22121-22140 | Msa1435530:intron | 35.0% | |
| ! | TAACCCTCTTTTTACACAAG+AGG | - | tig0027707:22176-22195 | None:intergenic | 35.0% |
| TCTTGTGTAAAAAGAGGGTT+AGG | + | tig0027707:22175-22194 | Msa1435530:intron | 35.0% | |
| GTTGCATACAATACACCAAA+TGG | + | tig0027707:22197-22216 | Msa1435530:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | + | tig0027707:22201-22220 | Msa1435530:intron | 35.0% | |
| AAGTAATAAAAAGGGCAACC+CGG | - | tig0027707:22267-22286 | None:intergenic | 35.0% | |
| TAAAGTTTCCATTATGTCCC+AGG | + | tig0027707:22290-22309 | Msa1435530:intron | 35.0% | |
| !! | TTTGTTATTTCAGGCGTCAA+GGG | + | tig0027707:22441-22460 | Msa1435530:intron | 35.0% |
| ATCAGCATTCTATTGTAGCA+AGG | + | tig0027707:22519-22538 | Msa1435530:intron | 35.0% | |
| TGCCATAAGTTATAGGTTAG+TGG | - | tig0027707:22553-22572 | None:intergenic | 35.0% | |
| TGCTTTCTGCCATAAGTTAT+AGG | - | tig0027707:22560-22579 | None:intergenic | 35.0% | |
| GTGGATGTAACATATACATG+TGG | + | tig0027707:22685-22704 | Msa1435530:intron | 35.0% | |
| ! | TCTGACTTGAGATAATCTCT+TGG | - | tig0027707:22746-22765 | None:intergenic | 35.0% |
| AGAGATTATCTCAAGTCAGA+AGG | + | tig0027707:22746-22765 | Msa1435530:CDS | 35.0% | |
| GCAAGTGAAATTGTTATCTG+TGG | + | tig0027707:22820-22839 | Msa1435530:CDS | 35.0% | |
| GTGAAATTGTTATCTGTGGA+TGG | + | tig0027707:22824-22843 | Msa1435530:CDS | 35.0% | |
| !! | AATTTTGATACCAGCAATGC+AGG | + | tig0027707:22930-22949 | Msa1435530:intron | 35.0% |
| !! | AGATTTCTTTCTGAGATTGC+AGG | + | tig0027707:22987-23006 | Msa1435530:CDS | 35.0% |
| ! | CTTTGATCATTTGGAGTCTT+TGG | - | tig0027707:23140-23159 | None:intergenic | 35.0% |
| GTGCATTTGCTTTGATCATT+TGG | - | tig0027707:23149-23168 | None:intergenic | 35.0% | |
| TGAGATGCTAAAAAGGATTC+AGG | + | tig0027707:23179-23198 | Msa1435530:intron | 35.0% | |
| AGAAAATAAATACTACCGCG+GGG | + | tig0027707:23498-23517 | Msa1435530:three_prime_UTR | 35.0% | |
| GTGAACCTTCGAAACTATAT+GGG | - | tig0027707:23557-23576 | None:intergenic | 35.0% | |
| AGTGAACCTTCGAAACTATA+TGG | - | tig0027707:23558-23577 | None:intergenic | 35.0% | |
| TTCTTTATTGTGCAGGACTT+TGG | - | tig0027707:23609-23628 | None:intergenic | 35.0% | |
| ATATATCATTCAAGGGTTGG+TGG | + | tig0027707:23776-23795 | Msa1435530:three_prime_UTR | 35.0% | |
| ! | TGATTTTCGACGGACAACAA+GGG | - | tig0027707:20480-20499 | None:intergenic | 40.0% |
| AACACAACACACGATGACTT+TGG | - | tig0027707:20534-20553 | None:intergenic | 40.0% | |
| ATGCTGTGTCTTACAAGCAT+AGG | + | tig0027707:20680-20699 | Msa1435530:CDS | 40.0% | |
| TGCTGTGTCTTACAAGCATA+GGG | + | tig0027707:20681-20700 | Msa1435530:CDS | 40.0% | |
| ! | TCTCTGAAAACGGACATATC+AGG | - | tig0027707:20712-20731 | None:intergenic | 40.0% |
| ! | GATTTAGGGTTAGGGTTAGA+GGG | - | tig0027707:20763-20782 | None:intergenic | 40.0% |
| !! | GGGGTTTGGTAATGGATTTA+GGG | - | tig0027707:20777-20796 | None:intergenic | 40.0% |
| !! | AGGGGTTTGGTAATGGATTT+AGG | - | tig0027707:20778-20797 | None:intergenic | 40.0% |
| ! | CCAGAGAATTTGTCAAGTTG+GGG | - | tig0027707:20811-20830 | None:intergenic | 40.0% |
| GACCAGAGAATTTGTCAAGT+TGG | - | tig0027707:20813-20832 | None:intergenic | 40.0% | |
| GTGAATGGAGATTCTTTCTC+TGG | + | tig0027707:21016-21035 | Msa1435530:CDS | 40.0% | |
| ! | GAGATTCTTTCTCTGGAAGT+TGG | + | tig0027707:21023-21042 | Msa1435530:CDS | 40.0% |
| ! | TGTTGGAGTGTTAACTGAGA+AGG | + | tig0027707:21051-21070 | Msa1435530:CDS | 40.0% |
| ! | GTTGGAGTGTTAACTGAGAA+GGG | + | tig0027707:21052-21071 | Msa1435530:CDS | 40.0% |
| ! | TTGGAGTGTTAACTGAGAAG+GGG | + | tig0027707:21053-21072 | Msa1435530:CDS | 40.0% |
| ATGGGAAGAGCTATTGCATA+TGG | + | tig0027707:21095-21114 | Msa1435530:CDS | 40.0% | |
| AATATACCTTGGCATCCTTG+CGG | - | tig0027707:21234-21253 | None:intergenic | 40.0% | |
| AGAGGCGATGGTTGAAAAAA+TGG | - | tig0027707:21272-21291 | None:intergenic | 40.0% | |
| AAAAGAGATTTCAGAGGCGA+TGG | - | tig0027707:21284-21303 | None:intergenic | 40.0% | |
| !! | CTCTTGCTTTTGAAGGGTAA+TGG | + | tig0027707:21310-21329 | Msa1435530:intron | 40.0% |
| CAGAGGATATTGCATCTTCA+AGG | - | tig0027707:21363-21382 | None:intergenic | 40.0% | |
| ! | CTCTGTTCTCTTGTCGATTA+CGG | + | tig0027707:21378-21397 | Msa1435530:CDS | 40.0% |
| ATTTGTCACCACAATGTGAC+AGG | - | tig0027707:21718-21737 | None:intergenic | 40.0% | |
| ATTGCGACCAAGCTATTGAA+TGG | - | tig0027707:21786-21805 | None:intergenic | 40.0% | |
| ! | GAGCAGTATCAGCTTTAACA+TGG | + | tig0027707:21837-21856 | Msa1435530:intron | 40.0% |
| GCATAACAAGAAACCTAGCA+TGG | - | tig0027707:21876-21895 | None:intergenic | 40.0% | |
| !! | TATGGCGTGCTCTGAAAAAA+TGG | - | tig0027707:21898-21917 | None:intergenic | 40.0% |
| TAAAGTTTGAGGGGTAACCT+TGG | + | tig0027707:22089-22108 | Msa1435530:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAG+AGG | + | tig0027707:22169-22188 | Msa1435530:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAGA+GGG | + | tig0027707:22170-22189 | Msa1435530:intron | 40.0% | |
| GCATACAATACACCAAATGG+TGG | + | tig0027707:22200-22219 | Msa1435530:intron | 40.0% | |
| !! | CTTTGTTATTTCAGGCGTCA+AGG | + | tig0027707:22440-22459 | Msa1435530:intron | 40.0% |
| ACTGTACGAACTGAACTCAA+GGG | + | tig0027707:22595-22614 | Msa1435530:CDS | 40.0% | |
| ATCTGTGGATGGTATCAGAA+AGG | + | tig0027707:22835-22854 | Msa1435530:CDS | 40.0% | |
| !! | ATGGTATCAGAAAGGCATTG+AGG | + | tig0027707:22843-22862 | Msa1435530:CDS | 40.0% |
| TTGCAGAGAAAGAACTCAAG+TGG | - | tig0027707:22897-22916 | None:intergenic | 40.0% | |
| !!! | TGTTACTTTTCCTGCATTGC+TGG | - | tig0027707:22943-22962 | None:intergenic | 40.0% |
| !! | AGCTGACTTTTACCCCTTTA+CGG | + | tig0027707:23072-23091 | Msa1435530:intron | 40.0% |
| TTCCTGTAAACAGCCGTAAA+GGG | - | tig0027707:23088-23107 | None:intergenic | 40.0% | |
| TTTCCTGTAAACAGCCGTAA+AGG | - | tig0027707:23089-23108 | None:intergenic | 40.0% | |
| GAAGAGGTGAGATGCTAAAA+AGG | + | tig0027707:23172-23191 | Msa1435530:intron | 40.0% | |
| CTTATGCATGTGTCCATTAG+AGG | + | tig0027707:23218-23237 | Msa1435530:intron | 40.0% | |
| TGTCATAAGAAACCAGCAGT+TGG | + | tig0027707:23311-23330 | Msa1435530:CDS | 40.0% | |
| ! | CTCTTTTAACATCCAACTGC+TGG | - | tig0027707:23326-23345 | None:intergenic | 40.0% |
| ! | GATAAAGCCACAAAGAGTAC+AGG | + | tig0027707:23372-23391 | Msa1435530:CDS | 40.0% |
| AGATCTTATTAGTTCGGACG+AGG | + | tig0027707:23410-23429 | Msa1435530:CDS | 40.0% | |
| TAGTGCCCATATAGTTTCGA+AGG | + | tig0027707:23549-23568 | Msa1435530:three_prime_UTR | 40.0% | |
| ! | CTGATTTTCGACGGACAACA+AGG | - | tig0027707:20481-20500 | None:intergenic | 45.0% |
| TCGTCATCATCAGCATCAAG+CGG | - | tig0027707:20661-20680 | None:intergenic | 45.0% | |
| ! | TTGAACGGCGTCTCTGAAAA+CGG | - | tig0027707:20722-20741 | None:intergenic | 45.0% |
| ! | GGATTTAGGGTTAGGGTTAG+AGG | - | tig0027707:20764-20783 | None:intergenic | 45.0% |
| !! | TTTGTCAAGTTGGGGATCGT+CGG | - | tig0027707:20803-20822 | None:intergenic | 45.0% |
| CCCCAACTTGACAAATTCTC+TGG | + | tig0027707:20808-20827 | Msa1435530:CDS | 45.0% | |
| AGCAGGGGTTAAACATTGGT+TGG | - | tig0027707:20845-20864 | None:intergenic | 45.0% | |
| TTTAACCCCTGCTGAGCTTA+GGG | + | tig0027707:20852-20871 | Msa1435530:CDS | 45.0% | |
| TCAGAGGAACTGTCAAGAGA+AGG | + | tig0027707:21174-21193 | Msa1435530:CDS | 45.0% | |
| AGGAACTGTCAAGAGAAGGA+AGG | + | tig0027707:21178-21197 | Msa1435530:CDS | 45.0% | |
| CTTCAATTCTACTGTCCGCA+AGG | + | tig0027707:21216-21235 | Msa1435530:CDS | 45.0% | |
| CGTAATCGACAAGAGAACAG+AGG | - | tig0027707:21380-21399 | None:intergenic | 45.0% | |
| ! | TCTCTTGTCGATTACGGTTG+CGG | + | tig0027707:21384-21403 | Msa1435530:CDS | 45.0% |
| GTGTGGAATTGGACACTAGT+TGG | + | tig0027707:21657-21676 | Msa1435530:intron | 45.0% | |
| GCATTTGTCCTGTCACATTG+TGG | + | tig0027707:21707-21726 | Msa1435530:intron | 45.0% | |
| AACAAGAAACCTAGCATGGC+AGG | - | tig0027707:21872-21891 | None:intergenic | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | + | tig0027707:22125-22144 | Msa1435530:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | tig0027707:22165-22184 | None:intergenic | 45.0% |
| CTTGAGTTCAGTTCGTACAG+TGG | - | tig0027707:22596-22615 | None:intergenic | 45.0% | |
| CACTGTACGAACTGAACTCA+AGG | + | tig0027707:22594-22613 | Msa1435530:CDS | 45.0% | |
| TACGAACTGAACTCAAGGGA+GGG | + | tig0027707:22599-22618 | Msa1435530:CDS | 45.0% | |
| !!! | AAGTTTGTTTTGTCGGCGAG+GGG | - | tig0027707:22788-22807 | None:intergenic | 45.0% |
| !!! | CAAGTTTGTTTTGTCGGCGA+GGG | - | tig0027707:22789-22808 | None:intergenic | 45.0% |
| !!! | TCAAGTTTGTTTTGTCGGCG+AGG | - | tig0027707:22790-22809 | None:intergenic | 45.0% |
| TCCTGTAAACAGCCGTAAAG+GGG | - | tig0027707:23087-23106 | None:intergenic | 45.0% | |
| AAAGCAAATGCACAGCGAAG+AGG | + | tig0027707:23156-23175 | Msa1435530:CDS | 45.0% | |
| CAGGTGTGTTAAGCCTCTAA+TGG | - | tig0027707:23234-23253 | None:intergenic | 45.0% | |
| AGAGTAAAGACAGAGAGGCA+AGG | + | tig0027707:23342-23361 | Msa1435530:CDS | 45.0% | |
| AAAGACAGAGAGGCAAGGTT+TGG | + | tig0027707:23347-23366 | Msa1435530:CDS | 45.0% | |
| CATCTTGCCTGTACTCTTTG+TGG | - | tig0027707:23382-23401 | None:intergenic | 45.0% | |
| AAATAAATACTACCGCGGGG+TGG | + | tig0027707:23501-23520 | Msa1435530:three_prime_UTR | 45.0% | |
| ! | TAATTTTTACCACCACCCCG+CGG | - | tig0027707:23516-23535 | None:intergenic | 45.0% |
| TTTCGACGGACAACAAGGGA+GGG | - | tig0027707:20476-20495 | None:intergenic | 50.0% | |
| ! | TTTTCGACGGACAACAAGGG+AGG | - | tig0027707:20477-20496 | None:intergenic | 50.0% |
| GTCGTCAAACCACGAAGATC+TGG | + | tig0027707:20579-20598 | Msa1435530:CDS | 50.0% | |
| CTCTGTCGTGAAGAGAAAGC+AGG | - | tig0027707:20609-20628 | None:intergenic | 50.0% | |
| ATCAAGCGGAGAAGGAGAAG+CGG | - | tig0027707:20647-20666 | None:intergenic | 50.0% | |
| TCATCAGCATCAAGCGGAGA+AGG | - | tig0027707:20655-20674 | None:intergenic | 50.0% | |
| AGGGTTAGGGTTAGAGGGTT+GGG | - | tig0027707:20758-20777 | None:intergenic | 50.0% | |
| TAGGGTTAGGGTTAGAGGGT+TGG | - | tig0027707:20759-20778 | None:intergenic | 50.0% | |
| GCTCAGCAGGGGTTAAACAT+TGG | - | tig0027707:20849-20868 | None:intergenic | 50.0% | |
| GTTTAACCCCTGCTGAGCTT+AGG | + | tig0027707:20851-20870 | Msa1435530:CDS | 50.0% | |
| AGATTCCCTAAGCTCAGCAG+GGG | - | tig0027707:20860-20879 | None:intergenic | 50.0% | |
| CAGATTCCCTAAGCTCAGCA+GGG | - | tig0027707:20861-20880 | None:intergenic | 50.0% | |
| ACAGATTCCCTAAGCTCAGC+AGG | - | tig0027707:20862-20881 | None:intergenic | 50.0% | |
| TCTGGAAGTTGGGTCACTGT+TGG | + | tig0027707:21034-21053 | Msa1435530:CDS | 50.0% | |
| ATACATGTGCCTGCCATGCT+AGG | + | tig0027707:21860-21879 | Msa1435530:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | tig0027707:22109-22128 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | + | tig0027707:22131-22150 | Msa1435530:intron | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | + | tig0027707:22132-22151 | Msa1435530:intron | 50.0% | |
| GTACGAACTGAACTCAAGGG+AGG | + | tig0027707:22598-22617 | Msa1435530:CDS | 50.0% | |
| !!! | AGTTTGTTTTGTCGGCGAGG+GGG | - | tig0027707:22787-22806 | None:intergenic | 50.0% |
| ACAACAGCTTCACACTCGCA+AGG | + | tig0027707:22960-22979 | Msa1435530:CDS | 50.0% | |
| CAACAGCTTCACACTCGCAA+GGG | + | tig0027707:22961-22980 | Msa1435530:CDS | 50.0% | |
| ACCCCTTTACGGCTGTTTAC+AGG | + | tig0027707:23083-23102 | Msa1435530:intron | 50.0% | |
| GCAGGAGATCCAGATCTTCG+TGG | - | tig0027707:20591-20610 | None:intergenic | 55.0% | |
| TCAAGCGGAGAAGGAGAAGC+GGG | - | tig0027707:20646-20665 | None:intergenic | 55.0% | |
| ! | GTCGGTGAGGGGTTTGGTAA+TGG | - | tig0027707:20785-20804 | None:intergenic | 55.0% |
| AAGTTGGGGATCGTCGGTGA+GGG | - | tig0027707:20797-20816 | None:intergenic | 55.0% | |
| TACTGTCCGCAAGGATGCCA+AGG | + | tig0027707:21225-21244 | Msa1435530:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | tig0027707:22144-22163 | Msa1435530:intron | 55.0% | |
| ! | CAAATGGTGGGACCCCTTCT+CGG | + | tig0027707:22213-22232 | Msa1435530:intron | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | - | tig0027707:22240-22259 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | tig0027707:22241-22260 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | tig0027707:22245-22264 | Msa1435530:intron | 55.0% |
| TAAATACTACCGCGGGGTGG+TGG | + | tig0027707:23504-23523 | Msa1435530:three_prime_UTR | 55.0% | |
| AGTTGGGGATCGTCGGTGAG+GGG | - | tig0027707:20796-20815 | None:intergenic | 60.0% | |
| ! | CAAGTTGGGGATCGTCGGTG+AGG | - | tig0027707:20798-20817 | None:intergenic | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | tig0027707:22098-22117 | Msa1435530:intron | 60.0% | |
| CGAGAAGGGGTCCCACCATT+TGG | - | tig0027707:22215-22234 | None:intergenic | 60.0% | |
| CATACGCAGGGTCCGAGAAG+GGG | - | tig0027707:22228-22247 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCCGAGAA+GGG | - | tig0027707:22229-22248 | None:intergenic | 60.0% | |
| CTTCTCGGACCCTGCGTATG+CGG | + | tig0027707:22228-22247 | Msa1435530:intron | 60.0% | |
| TTCTCGGACCCTGCGTATGC+GGG | + | tig0027707:22229-22248 | Msa1435530:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | tig0027707:22246-22265 | Msa1435530:intron | 60.0% |
| GGAGAAGCGGGAGGGGTTTC+AGG | - | tig0027707:20634-20653 | None:intergenic | 65.0% | |
| CGGAGAAGGAGAAGCGGGAG+GGG | - | tig0027707:20641-20660 | None:intergenic | 65.0% | |
| GCGGAGAAGGAGAAGCGGGA+GGG | - | tig0027707:20642-20661 | None:intergenic | 65.0% | |
| AGCGGAGAAGGAGAAGCGGG+AGG | - | tig0027707:20643-20662 | None:intergenic | 65.0% | |
| GGGATCGTCGGTGAGGGGTT+TGG | - | tig0027707:20791-20810 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCCGAGA+AGG | - | tig0027707:22230-22249 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027707 | gene | 20464 | 23880 | 20464 | ID=Msa1435530;Name=Msa1435530 |
| tig0027707 | mRNA | 20464 | 23880 | 20464 | ID=Msa1435530-mRNA-1;Parent=Msa1435530;Name=Msa1435530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=113|0.85|0.75|1|1|1|8|440|404 |
| tig0027707 | exon | 20464 | 20917 | 20464 | ID=Msa1435530-mRNA-1:exon:9767;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 21009 | 21246 | 21009 | ID=Msa1435530-mRNA-1:exon:9768;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 21325 | 21431 | 21325 | ID=Msa1435530-mRNA-1:exon:9769;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 22537 | 22620 | 22537 | ID=Msa1435530-mRNA-1:exon:9770;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 22721 | 22864 | 22721 | ID=Msa1435530-mRNA-1:exon:9771;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 22944 | 23008 | 22944 | ID=Msa1435530-mRNA-1:exon:9772;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 23105 | 23177 | 23105 | ID=Msa1435530-mRNA-1:exon:9773;Parent=Msa1435530-mRNA-1 |
| tig0027707 | exon | 23278 | 23880 | 23278 | ID=Msa1435530-mRNA-1:exon:9774;Parent=Msa1435530-mRNA-1 |
| tig0027707 | five_prime_UTR | 20464 | 20576 | 20464 | ID=Msa1435530-mRNA-1:five_prime_utr;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 20577 | 20917 | 20577 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 21009 | 21246 | 21009 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 21325 | 21431 | 21325 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 22537 | 22620 | 22537 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 22721 | 22864 | 22721 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 22944 | 23008 | 22944 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 23105 | 23177 | 23105 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | CDS | 23278 | 23440 | 23278 | ID=Msa1435530-mRNA-1:cds;Parent=Msa1435530-mRNA-1 |
| tig0027707 | three_prime_UTR | 23441 | 23880 | 23441 | ID=Msa1435530-mRNA-1:three_prime_utr;Parent=Msa1435530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
