Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593400 | XP_024637036.1 | 96.154 | 546 | 21 | 0 | 1 | 546 | 51 | 596 | 0.0 | 1066 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593400 | sp|Q6AVI0|RSLE2_ORYSJ | 33.792 | 509 | 325 | 8 | 8 | 508 | 198 | 702 | 2.22e-95 | 309 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005020 | Msa0593400 | 0.851070 | 1.127170e-60 | -8.615850e-47 |
Msa0016040 | Msa0593400 | 0.866346 | 3.050583e-65 | -8.615850e-47 |
Msa0018920 | Msa0593400 | 0.811014 | 8.651227e-51 | -8.615850e-47 |
Msa0019930 | Msa0593400 | 0.840114 | 1.056562e-57 | -8.615850e-47 |
Msa0020540 | Msa0593400 | 0.830192 | 3.372047e-55 | -8.615850e-47 |
Msa0025580 | Msa0593400 | 0.804740 | 1.868282e-49 | -8.615850e-47 |
Msa0027280 | Msa0593400 | 0.816125 | 6.498691e-52 | -8.615850e-47 |
Msa0032980 | Msa0593400 | 0.837939 | 3.866076e-57 | -8.615850e-47 |
Msa0037740 | Msa0593400 | 0.815516 | 8.883505e-52 | -8.615850e-47 |
Msa0048510 | Msa0593400 | 0.812543 | 4.021235e-51 | -8.615850e-47 |
Msa0053070 | Msa0593400 | 0.863353 | 2.644476e-64 | -8.615850e-47 |
Msa0056180 | Msa0593400 | 0.861450 | 1.017371e-63 | -8.615850e-47 |
Msa0062340 | Msa0593400 | 0.843340 | 1.488037e-58 | -8.615850e-47 |
Msa0065020 | Msa0593400 | 0.813686 | 2.257902e-51 | -8.615850e-47 |
Msa0067060 | Msa0593400 | 0.836107 | 1.135999e-56 | -8.615850e-47 |
Msa0067380 | Msa0593400 | 0.817616 | 3.006535e-52 | -8.615850e-47 |
Msa0068150 | Msa0593400 | 0.842040 | 3.296456e-58 | -8.615850e-47 |
Msa0073120 | Msa0593400 | 0.819551 | 1.094600e-52 | -8.615850e-47 |
Msa0074360 | Msa0593400 | 0.809688 | 1.672288e-50 | -8.615850e-47 |
Msa0077560 | Msa0593400 | 0.814447 | 1.533640e-51 | -8.615850e-47 |
Msa0081980 | Msa0593400 | 0.832369 | 9.833384e-56 | -8.615850e-47 |
Msa0082020 | Msa0593400 | 0.803431 | 3.497908e-49 | -8.615850e-47 |
Msa0091350 | Msa0593400 | 0.811709 | 6.113552e-51 | -8.615850e-47 |
Msa0094780 | Msa0593400 | 0.806914 | 6.525910e-50 | -8.615850e-47 |
Msa0094790 | Msa0593400 | 0.816487 | 5.392089e-52 | -8.615850e-47 |
Msa0098410 | Msa0593400 | 0.849130 | 3.938261e-60 | -8.615850e-47 |
Msa0110200 | Msa0593400 | 0.808185 | 3.506187e-50 | -8.615850e-47 |
Msa0112670 | Msa0593400 | 0.853038 | 3.111330e-61 | -8.615850e-47 |
Msa0115550 | Msa0593400 | 0.855491 | 6.086829e-62 | -8.615850e-47 |
Msa0121330 | Msa0593400 | 0.832785 | 7.753593e-56 | -8.615850e-47 |
Msa0122330 | Msa0593400 | 0.838222 | 3.269377e-57 | -8.615850e-47 |
Msa0123070 | Msa0593400 | 0.837608 | 4.702934e-57 | -8.615850e-47 |
Msa0123320 | Msa0593400 | 0.806091 | 9.732667e-50 | -8.615850e-47 |
Msa0127680 | Msa0593400 | 0.848834 | 4.759904e-60 | -8.615850e-47 |
Msa0128460 | Msa0593400 | 0.803647 | 3.155389e-49 | -8.615850e-47 |
Msa0140380 | Msa0593400 | 0.829227 | 5.792362e-55 | -8.615850e-47 |
Msa0141640 | Msa0593400 | 0.816126 | 6.492870e-52 | -8.615850e-47 |
Msa0153210 | Msa0593400 | 0.802080 | 6.646200e-49 | -8.615850e-47 |
Msa0156510 | Msa0593400 | 0.807966 | 3.904755e-50 | -8.615850e-47 |
Msa0159590 | Msa0593400 | 0.863856 | 1.846758e-64 | -8.615850e-47 |
Msa0159620 | Msa0593400 | 0.850237 | 1.932975e-60 | -8.615850e-47 |
Msa0165830 | Msa0593400 | 0.826448 | 2.697636e-54 | -8.615850e-47 |
Msa0166170 | Msa0593400 | 0.831084 | 2.039635e-55 | -8.615850e-47 |
Msa0168050 | Msa0593400 | 0.817549 | 3.112769e-52 | -8.615850e-47 |
Msa0174290 | Msa0593400 | 0.839889 | 1.209402e-57 | -8.615850e-47 |
Msa0190570 | Msa0593400 | 0.835422 | 1.693642e-56 | -8.615850e-47 |
Msa0190730 | Msa0593400 | 0.837630 | 4.640559e-57 | -8.615850e-47 |
Msa0200050 | Msa0593400 | 0.847938 | 8.425539e-60 | -8.615850e-47 |
Msa0209980 | Msa0593400 | 0.847329 | 1.239245e-59 | -8.615850e-47 |
Msa0213030 | Msa0593400 | 0.809863 | 1.533143e-50 | -8.615850e-47 |
Msa0232760 | Msa0593400 | 0.849978 | 2.284542e-60 | -8.615850e-47 |
Msa0233020 | Msa0593400 | 0.805542 | 1.269643e-49 | -8.615850e-47 |
Msa0367150 | Msa0593400 | 0.816191 | 6.281254e-52 | -8.615850e-47 |
Msa0367520 | Msa0593400 | 0.832703 | 8.126178e-56 | -8.615850e-47 |
Msa0368860 | Msa0593400 | 0.878263 | 3.234599e-69 | -8.615850e-47 |
Msa0373170 | Msa0593400 | 0.818365 | 2.035918e-52 | -8.615850e-47 |
Msa0373500 | Msa0593400 | 0.871217 | 8.086377e-67 | -8.615850e-47 |
Msa0373590 | Msa0593400 | 0.817878 | 2.624606e-52 | -8.615850e-47 |
Msa0377710 | Msa0593400 | 0.825121 | 5.570379e-54 | -8.615850e-47 |
Msa0383000 | Msa0593400 | 0.845974 | 2.904492e-59 | -8.615850e-47 |
Msa0400950 | Msa0593400 | 0.826351 | 2.845357e-54 | -8.615850e-47 |
Msa0409830 | Msa0593400 | 0.810703 | 1.010332e-50 | -8.615850e-47 |
Msa0416160 | Msa0593400 | 0.816105 | 6.564129e-52 | -8.615850e-47 |
Msa0421150 | Msa0593400 | 0.845347 | 4.298426e-59 | -8.615850e-47 |
Msa0421750 | Msa0593400 | 0.823985 | 1.031433e-53 | -8.615850e-47 |
Msa0432010 | Msa0593400 | 0.822045 | 2.922012e-53 | -8.615850e-47 |
Msa0433150 | Msa0593400 | 0.839413 | 1.608515e-57 | -8.615850e-47 |
Msa0433760 | Msa0593400 | 0.805210 | 1.490292e-49 | -8.615850e-47 |
Msa0436330 | Msa0593400 | 0.818033 | 2.420439e-52 | -8.615850e-47 |
Msa0447750 | Msa0593400 | 0.846104 | 2.678139e-59 | -8.615850e-47 |
Msa0454560 | Msa0593400 | 0.823554 | 1.301088e-53 | -8.615850e-47 |
Msa0456670 | Msa0593400 | 0.826293 | 2.938050e-54 | -8.615850e-47 |
Msa0459740 | Msa0593400 | 0.803404 | 3.543031e-49 | -8.615850e-47 |
Msa0462780 | Msa0593400 | 0.875799 | 2.318113e-68 | -8.615850e-47 |
Msa0466520 | Msa0593400 | 0.817425 | 3.319218e-52 | -8.615850e-47 |
Msa0466880 | Msa0593400 | 0.804906 | 1.724875e-49 | -8.615850e-47 |
Msa0467690 | Msa0593400 | 0.820098 | 8.205305e-53 | -8.615850e-47 |
Msa0468620 | Msa0593400 | 0.849372 | 3.374339e-60 | -8.615850e-47 |
Msa0480730 | Msa0593400 | 0.815629 | 8.380238e-52 | -8.615850e-47 |
Msa0481890 | Msa0593400 | 0.851153 | 1.068050e-60 | -8.615850e-47 |
Msa0242590 | Msa0593400 | 0.808121 | 3.618939e-50 | -8.615850e-47 |
Msa0269210 | Msa0593400 | 0.826786 | 2.240662e-54 | -8.615850e-47 |
Msa0272260 | Msa0593400 | 0.825320 | 4.999697e-54 | -8.615850e-47 |
Msa0280790 | Msa0593400 | 0.807239 | 5.569234e-50 | -8.615850e-47 |
Msa0298580 | Msa0593400 | 0.825917 | 3.607825e-54 | -8.615850e-47 |
Msa0337480 | Msa0593400 | 0.824659 | 7.160914e-54 | -8.615850e-47 |
Msa0343010 | Msa0593400 | 0.859108 | 5.194342e-63 | -8.615850e-47 |
Msa0353950 | Msa0593400 | 0.821308 | 4.325967e-53 | -8.615850e-47 |
Msa0495550 | Msa0593400 | 0.810091 | 1.369211e-50 | -8.615850e-47 |
Msa0502510 | Msa0593400 | 0.829465 | 5.070966e-55 | -8.615850e-47 |
Msa0504720 | Msa0593400 | 0.815051 | 1.126620e-51 | -8.615850e-47 |
Msa0513620 | Msa0593400 | 0.809628 | 1.722749e-50 | -8.615850e-47 |
Msa0514020 | Msa0593400 | 0.819172 | 1.335053e-52 | -8.615850e-47 |
Msa0514500 | Msa0593400 | 0.851856 | 6.758330e-61 | -8.615850e-47 |
Msa0514580 | Msa0593400 | 0.808728 | 2.685706e-50 | -8.615850e-47 |
Msa0520870 | Msa0593400 | 0.832584 | 8.694759e-56 | -8.615850e-47 |
Msa0521680 | Msa0593400 | 0.834860 | 2.347936e-56 | -8.615850e-47 |
Msa0524520 | Msa0593400 | 0.804737 | 1.870715e-49 | -8.615850e-47 |
Msa0531960 | Msa0593400 | 0.846660 | 1.889621e-59 | -8.615850e-47 |
Msa0532050 | Msa0593400 | 0.828101 | 1.084252e-54 | -8.615850e-47 |
Msa0534100 | Msa0593400 | 0.810510 | 1.112348e-50 | -8.615850e-47 |
Msa0545920 | Msa0593400 | 0.839041 | 2.008042e-57 | -8.615850e-47 |
Msa0550590 | Msa0593400 | 0.840691 | 7.465058e-58 | -8.615850e-47 |
Msa0553750 | Msa0593400 | 0.807367 | 5.233708e-50 | -8.615850e-47 |
Msa0559100 | Msa0593400 | 0.825376 | 4.848635e-54 | -8.615850e-47 |
Msa0561560 | Msa0593400 | 0.832156 | 1.110156e-55 | -8.615850e-47 |
Msa0563740 | Msa0593400 | 0.853733 | 1.965321e-61 | -8.615850e-47 |
Msa0563900 | Msa0593400 | 0.852310 | 5.021595e-61 | -8.615850e-47 |
Msa0567170 | Msa0593400 | 0.849650 | 2.822389e-60 | -8.615850e-47 |
Msa0571620 | Msa0593400 | 0.812273 | 4.607123e-51 | -8.615850e-47 |
Msa0572830 | Msa0593400 | 0.801217 | 9.991458e-49 | -8.615850e-47 |
Msa0577280 | Msa0593400 | 0.829191 | 5.910320e-55 | -8.615850e-47 |
Msa0577330 | Msa0593400 | 0.833082 | 6.541240e-56 | -8.615850e-47 |
Msa0577450 | Msa0593400 | 0.853823 | 1.852325e-61 | -8.615850e-47 |
Msa0577820 | Msa0593400 | 0.863414 | 2.532269e-64 | -8.615850e-47 |
Msa0580200 | Msa0593400 | 0.800438 | 1.441187e-48 | -8.615850e-47 |
Msa0581840 | Msa0593400 | 0.831083 | 2.040442e-55 | -8.615850e-47 |
Msa0588920 | Msa0593400 | 0.838867 | 2.228234e-57 | -8.615850e-47 |
Msa0590200 | Msa0593400 | 0.853003 | 3.183686e-61 | -8.615850e-47 |
Msa0593400 | Msa0601720 | 0.841312 | 5.127342e-58 | -8.615850e-47 |
Msa0593400 | Msa0606100 | 0.844523 | 7.171934e-59 | -8.615850e-47 |
Msa0593400 | Msa0607800 | 0.862367 | 5.329078e-64 | -8.615850e-47 |
Msa0593400 | Msa0613630 | 0.823585 | 1.279349e-53 | -8.615850e-47 |
Msa0593400 | Msa0615630 | 0.842884 | 1.968950e-58 | -8.615850e-47 |
Msa0593400 | Msa0620500 | 0.837024 | 6.632668e-57 | -8.615850e-47 |
Msa0593400 | Msa0621710 | 0.859513 | 3.927137e-63 | -8.615850e-47 |
Msa0593400 | Msa0622920 | 0.827928 | 1.193212e-54 | -8.615850e-47 |
Msa0593400 | Msa0624900 | 0.802733 | 4.877085e-49 | -8.615850e-47 |
Msa0593400 | Msa0630660 | 0.808002 | 3.835215e-50 | -8.615850e-47 |
Msa0593400 | Msa0641990 | 0.838558 | 2.678431e-57 | -8.615850e-47 |
Msa0593400 | Msa0647050 | 0.856350 | 3.414213e-62 | -8.615850e-47 |
Msa0593400 | Msa0648040 | 0.858837 | 6.260415e-63 | -8.615850e-47 |
Msa0593400 | Msa0648760 | 0.807267 | 5.494569e-50 | -8.615850e-47 |
Msa0593400 | Msa0654740 | 0.806419 | 8.301704e-50 | -8.615850e-47 |
Msa0593400 | Msa0657700 | 0.855080 | 8.017709e-62 | -8.615850e-47 |
Msa0593400 | Msa0658640 | 0.826936 | 2.062736e-54 | -8.615850e-47 |
Msa0593400 | Msa0659150 | 0.804829 | 1.790559e-49 | -8.615850e-47 |
Msa0593400 | Msa0666700 | 0.849186 | 3.801528e-60 | -8.615850e-47 |
Msa0593400 | Msa0668900 | 0.841896 | 3.598394e-58 | -8.615850e-47 |
Msa0593400 | Msa0681050 | 0.845554 | 3.777614e-59 | -8.615850e-47 |
Msa0593400 | Msa0687090 | 0.806817 | 6.842491e-50 | -8.615850e-47 |
Msa0593400 | Msa0688910 | 0.810204 | 1.294998e-50 | -8.615850e-47 |
Msa0593400 | Msa0690740 | 0.864024 | 1.636855e-64 | -8.615850e-47 |
Msa0593400 | Msa0698730 | 0.864371 | 1.276328e-64 | -8.615850e-47 |
Msa0593400 | Msa0702810 | 0.849369 | 3.379918e-60 | -8.615850e-47 |
Msa0593400 | Msa0703600 | 0.848256 | 6.880038e-60 | -8.615850e-47 |
Msa0593400 | Msa0709200 | 0.850129 | 2.072932e-60 | -8.615850e-47 |
Msa0593400 | Msa0709440 | 0.851917 | 6.491200e-61 | -8.615850e-47 |
Msa0593400 | Msa0713920 | 0.846225 | 2.482151e-59 | -8.615850e-47 |
Msa0593400 | Msa0714520 | 0.863554 | 2.291280e-64 | -8.615850e-47 |
Msa0593400 | Msa0714790 | 0.864545 | 1.125995e-64 | -8.615850e-47 |
Msa0593400 | Msa0716480 | 0.832308 | 1.018148e-55 | -8.615850e-47 |
Msa0593400 | Msa0717900 | 0.828428 | 9.042142e-55 | -8.615850e-47 |
Msa0593400 | Msa0722220 | 0.818012 | 2.446754e-52 | -8.615850e-47 |
Msa0593400 | Msa0725270 | 0.833618 | 4.808033e-56 | -8.615850e-47 |
Msa0593400 | Msa0728770 | 0.825179 | 5.396616e-54 | -8.615850e-47 |
Msa0593400 | Msa0728780 | 0.844127 | 9.161895e-59 | -8.615850e-47 |
Msa0593400 | Msa0735780 | 0.847876 | 8.759658e-60 | -8.615850e-47 |
Msa0593400 | Msa0736890 | 0.804507 | 2.089550e-49 | -8.615850e-47 |
Msa0593400 | Msa0737990 | 0.806473 | 8.086896e-50 | -8.615850e-47 |
Msa0593400 | Msa0740710 | 0.828626 | 8.096306e-55 | -8.615850e-47 |
Msa0593400 | Msa0743440 | 0.870844 | 1.073515e-66 | -8.615850e-47 |
Msa0593400 | Msa0745720 | 0.830325 | 3.130000e-55 | -8.615850e-47 |
Msa0593400 | Msa0747740 | 0.865662 | 5.019363e-65 | -8.615850e-47 |
Msa0593400 | Msa0754450 | 0.802333 | 5.895503e-49 | -8.615850e-47 |
Msa0593400 | Msa0756180 | 0.804983 | 1.662149e-49 | -8.615850e-47 |
Msa0593400 | Msa0756820 | 0.873215 | 1.747112e-67 | -8.615850e-47 |
Msa0593400 | Msa0758650 | 0.837972 | 3.790782e-57 | -8.615850e-47 |
Msa0593400 | Msa0761670 | 0.804559 | 2.038230e-49 | -8.615850e-47 |
Msa0593400 | Msa0763550 | 0.813769 | 2.164201e-51 | -8.615850e-47 |
Msa0593400 | Msa0765810 | 0.804763 | 1.847795e-49 | -8.615850e-47 |
Msa0593400 | Msa0769730 | 0.828035 | 1.124558e-54 | -8.615850e-47 |
Msa0593400 | Msa0773630 | 0.863115 | 3.133277e-64 | -8.615850e-47 |
Msa0593400 | Msa0777750 | 0.819080 | 1.400914e-52 | -8.615850e-47 |
Msa0593400 | Msa0778550 | 0.826025 | 3.401135e-54 | -8.615850e-47 |
Msa0593400 | Msa0780910 | 0.840328 | 9.288808e-58 | -8.615850e-47 |
Msa0593400 | Msa0783930 | 0.805943 | 1.045696e-49 | -8.615850e-47 |
Msa0593400 | Msa0787590 | 0.806447 | 8.188629e-50 | -8.615850e-47 |
Msa0593400 | Msa0800660 | 0.809411 | 1.917463e-50 | -8.615850e-47 |
Msa0593400 | Msa0805680 | 0.833691 | 4.611240e-56 | -8.615850e-47 |
Msa0593400 | Msa0807690 | 0.816412 | 5.606017e-52 | -8.615850e-47 |
Msa0593400 | Msa0811020 | 0.830907 | 2.254745e-55 | -8.615850e-47 |
Msa0593400 | Msa0815970 | 0.808428 | 3.112978e-50 | -8.615850e-47 |
Msa0593400 | Msa0816080 | 0.821076 | 4.894011e-53 | -8.615850e-47 |
Msa0593400 | Msa0818150 | 0.819706 | 1.008999e-52 | -8.615850e-47 |
Msa0593400 | Msa0818880 | 0.824545 | 7.617754e-54 | -8.615850e-47 |
Msa0593400 | Msa0821160 | 0.816271 | 6.025657e-52 | -8.615850e-47 |
Msa0593400 | Msa0824450 | 0.851855 | 6.761008e-61 | -8.615850e-47 |
Msa0593400 | Msa0828190 | 0.808630 | 2.817613e-50 | -8.615850e-47 |
Msa0593400 | Msa0828970 | 0.849335 | 3.455091e-60 | -8.615850e-47 |
Msa0593400 | Msa0835350 | 0.800355 | 1.498512e-48 | -8.615850e-47 |
Msa0593400 | Msa0836150 | 0.841354 | 4.998474e-58 | -8.615850e-47 |
Msa0593400 | Msa0837460 | 0.840300 | 9.449595e-58 | -8.615850e-47 |
Msa0593400 | Msa0842070 | 0.800619 | 1.323557e-48 | -8.615850e-47 |
Msa0593400 | Msa0851300 | 0.834552 | 2.806217e-56 | -8.615850e-47 |
Msa0593400 | Msa0855230 | 0.806087 | 9.753741e-50 | -8.615850e-47 |
Msa0593400 | Msa0863620 | 0.862266 | 5.724959e-64 | -8.615850e-47 |
Msa0593400 | Msa0866530 | 0.802642 | 5.091564e-49 | -8.615850e-47 |
Msa0593400 | Msa0867110 | 0.829670 | 4.519946e-55 | -8.615850e-47 |
Msa0593400 | Msa0879920 | 0.814394 | 1.575919e-51 | -8.615850e-47 |
Msa0593400 | Msa0888790 | 0.861210 | 1.203909e-63 | -8.615850e-47 |
Msa0593400 | Msa0900760 | 0.806454 | 8.162055e-50 | -8.615850e-47 |
Msa0593400 | Msa0909760 | 0.816079 | 6.654048e-52 | -8.615850e-47 |
Msa0593400 | Msa0915520 | 0.836892 | 7.167428e-57 | -8.615850e-47 |
Msa0593400 | Msa0924430 | 0.830343 | 3.098738e-55 | -8.615850e-47 |
Msa0593400 | Msa0931590 | 0.872274 | 3.607796e-67 | -8.615850e-47 |
Msa0593400 | Msa0966320 | 0.837682 | 4.501381e-57 | -8.615850e-47 |
Msa0593400 | Msa0966480 | 0.832004 | 1.210775e-55 | -8.615850e-47 |
Msa0593400 | Msa0989370 | 0.858560 | 7.574562e-63 | -8.615850e-47 |
Msa0593400 | Msa0997920 | 0.817350 | 3.452115e-52 | -8.615850e-47 |
Msa0593400 | Msa1002640 | 0.836604 | 8.492006e-57 | -8.615850e-47 |
Msa0593400 | Msa1008670 | 0.815424 | 9.309680e-52 | -8.615850e-47 |
Msa0593400 | Msa1008680 | 0.822628 | 2.139215e-53 | -8.615850e-47 |
Msa0593400 | Msa1015250 | 0.803785 | 2.953936e-49 | -8.615850e-47 |
Msa0593400 | Msa1033920 | 0.824343 | 8.497238e-54 | -8.615850e-47 |
Msa0593400 | Msa1035570 | 0.807323 | 5.345606e-50 | -8.615850e-47 |
Msa0593400 | Msa1035610 | 0.817352 | 3.448039e-52 | -8.615850e-47 |
Msa0593400 | Msa1035650 | 0.853261 | 2.685509e-61 | -8.615850e-47 |
Msa0593400 | Msa1037540 | 0.822218 | 2.664063e-53 | -8.615850e-47 |
Msa0593400 | Msa1042880 | 0.830527 | 2.793007e-55 | -8.615850e-47 |
Msa0593400 | Msa1056830 | 0.800128 | 1.666779e-48 | -8.615850e-47 |
Msa0593400 | Msa1059020 | 0.850339 | 1.809964e-60 | -8.615850e-47 |
Msa0593400 | Msa1060900 | 0.827072 | 1.914676e-54 | -8.615850e-47 |
Msa0593400 | Msa1076020 | 0.836496 | 9.042935e-57 | -8.615850e-47 |
Msa0593400 | Msa1078880 | 0.825065 | 5.741810e-54 | -8.615850e-47 |
Msa0593400 | Msa1078970 | 0.826475 | 2.657918e-54 | -8.615850e-47 |
Msa0593400 | Msa1081390 | 0.829798 | 4.208632e-55 | -8.615850e-47 |
Msa0593400 | Msa1082200 | 0.811659 | 6.267136e-51 | -8.615850e-47 |
Msa0593400 | Msa1082380 | 0.828920 | 6.875704e-55 | -8.615850e-47 |
Msa0593400 | Msa1084530 | 0.853542 | 2.230176e-61 | -8.615850e-47 |
Msa0593400 | Msa1092420 | 0.814046 | 1.880513e-51 | -8.615850e-47 |
Msa0593400 | Msa1104220 | 0.818657 | 1.748570e-52 | -8.615850e-47 |
Msa0593400 | Msa1116190 | 0.859364 | 4.353587e-63 | -8.615850e-47 |
Msa0593400 | Msa1116220 | 0.827701 | 1.352905e-54 | -8.615850e-47 |
Msa0593400 | Msa1116660 | 0.829602 | 4.695154e-55 | -8.615850e-47 |
Msa0593400 | Msa1116740 | 0.816007 | 6.904380e-52 | -8.615850e-47 |
Msa0593400 | Msa1125820 | 0.858950 | 5.792417e-63 | -8.615850e-47 |
Msa0593400 | Msa1125990 | 0.857409 | 1.664921e-62 | -8.615850e-47 |
Msa0593400 | Msa1127280 | 0.845324 | 4.359594e-59 | -8.615850e-47 |
Msa0593400 | Msa1127470 | 0.827315 | 1.674784e-54 | -8.615850e-47 |
Msa0593400 | Msa1130420 | 0.818575 | 1.824886e-52 | -8.615850e-47 |
Msa0593400 | Msa1132530 | 0.842793 | 2.081520e-58 | -8.615850e-47 |
Msa0593400 | Msa1139050 | 0.821175 | 4.643926e-53 | -8.615850e-47 |
Msa0593400 | Msa1147910 | 0.802939 | 4.421125e-49 | -8.615850e-47 |
Msa0593400 | Msa1148630 | 0.833616 | 4.814109e-56 | -8.615850e-47 |
Msa0593400 | Msa1149450 | 0.810889 | 9.209216e-51 | -8.615850e-47 |
Msa0593400 | Msa1159590 | 0.800789 | 1.222125e-48 | -8.615850e-47 |
Msa0593400 | Msa1162880 | 0.829602 | 4.696231e-55 | -8.615850e-47 |
Msa0593400 | Msa1163180 | 0.826269 | 2.976358e-54 | -8.615850e-47 |
Msa0593400 | Msa1165480 | 0.846616 | 1.942184e-59 | -8.615850e-47 |
Msa0593400 | Msa1169190 | 0.819396 | 1.187417e-52 | -8.615850e-47 |
Msa0593400 | Msa1171070 | 0.811459 | 6.927826e-51 | -8.615850e-47 |
Msa0593400 | Msa1171290 | 0.846260 | 2.429156e-59 | -8.615850e-47 |
Msa0593400 | Msa1183740 | 0.830420 | 2.966946e-55 | -8.615850e-47 |
Msa0593400 | Msa1186520 | 0.810981 | 8.794617e-51 | -8.615850e-47 |
Msa0593400 | Msa1190390 | 0.841022 | 6.111129e-58 | -8.615850e-47 |
Msa0593400 | Msa1192550 | 0.810738 | 9.930295e-51 | -8.615850e-47 |
Msa0593400 | Msa1192560 | 0.806518 | 7.914013e-50 | -8.615850e-47 |
Msa0593400 | Msa1192570 | 0.832619 | 8.524619e-56 | -8.615850e-47 |
Msa0593400 | Msa1192590 | 0.804556 | 2.041181e-49 | -8.615850e-47 |
Msa0593400 | Msa1201540 | 0.808165 | 3.541847e-50 | -8.615850e-47 |
Msa0593400 | Msa1201780 | 0.828016 | 1.136177e-54 | -8.615850e-47 |
Msa0593400 | Msa1213830 | 0.858701 | 6.876553e-63 | -8.615850e-47 |
Msa0593400 | Msa1214350 | 0.876990 | 8.992415e-69 | -8.615850e-47 |
Msa0593400 | Msa1215870 | 0.821971 | 3.040185e-53 | -8.615850e-47 |
Msa0593400 | Msa1215980 | 0.836560 | 8.714206e-57 | -8.615850e-47 |
Msa0593400 | Msa1218820 | 0.868181 | 7.900562e-66 | -8.615850e-47 |
Msa0593400 | Msa1219770 | 0.825467 | 4.613539e-54 | -8.615850e-47 |
Msa0593400 | Msa1220030 | 0.803725 | 3.039920e-49 | -8.615850e-47 |
Msa0593400 | Msa1220170 | 0.806542 | 7.820625e-50 | -8.615850e-47 |
Msa0593400 | Msa1223390 | 0.800433 | 1.444614e-48 | -8.615850e-47 |
Msa0593400 | Msa1226520 | 0.826378 | 2.802976e-54 | -8.615850e-47 |
Msa0593400 | Msa1240770 | 0.803031 | 4.231890e-49 | -8.615850e-47 |
Msa0593400 | Msa1244240 | 0.859413 | 4.208305e-63 | -8.615850e-47 |
Msa0593400 | Msa1252790 | 0.817557 | 3.099884e-52 | -8.615850e-47 |
Msa0593400 | Msa1254540 | 0.864940 | 8.468284e-65 | -8.615850e-47 |
Msa0593400 | Msa1260710 | 0.801734 | 7.829271e-49 | -8.615850e-47 |
Msa0593400 | Msa1261050 | 0.855169 | 7.556600e-62 | -8.615850e-47 |
Msa0593400 | Msa1263740 | 0.834352 | 3.149066e-56 | -8.615850e-47 |
Msa0593400 | Msa1263780 | 0.846740 | 1.796849e-59 | -8.615850e-47 |
Msa0593400 | Msa1263900 | 0.837738 | 4.354113e-57 | -8.615850e-47 |
Msa0593400 | Msa1268540 | 0.832138 | 1.121252e-55 | -8.615850e-47 |
Msa0593400 | Msa1268630 | 0.815035 | 1.136124e-51 | -8.615850e-47 |
Msa0593400 | Msa1279120 | 0.810021 | 1.417768e-50 | -8.615850e-47 |
Msa0593400 | Msa1294460 | 0.840777 | 7.089003e-58 | -8.615850e-47 |
Msa0593400 | Msa1294790 | 0.824659 | 7.158457e-54 | -8.615850e-47 |
Msa0593400 | Msa1300460 | 0.867001 | 1.887486e-65 | -8.615850e-47 |
Msa0593400 | Msa1301700 | 0.835036 | 2.120120e-56 | -8.615850e-47 |
Msa0593400 | Msa1305780 | 0.858032 | 1.088418e-62 | -8.615850e-47 |
Msa0593400 | Msa1306790 | 0.873099 | 1.911056e-67 | -8.615850e-47 |
Msa0593400 | Msa1309090 | 0.839883 | 1.213442e-57 | -8.615850e-47 |
Msa0593400 | Msa1321610 | 0.805459 | 1.321698e-49 | -8.615850e-47 |
Msa0593400 | Msa1332950 | 0.855495 | 6.073532e-62 | -8.615850e-47 |
Msa0593400 | Msa1338210 | 0.876080 | 1.855870e-68 | -8.615850e-47 |
Msa0593400 | Msa1339170 | 0.869351 | 3.305548e-66 | -8.615850e-47 |
Msa0593400 | Msa1343170 | 0.819544 | 1.098698e-52 | -8.615850e-47 |
Msa0593400 | Msa1343180 | 0.844322 | 8.125221e-59 | -8.615850e-47 |
Msa0593400 | Msa1356060 | 0.807601 | 4.666527e-50 | -8.615850e-47 |
Msa0593400 | Msa1359980 | 0.815629 | 8.380884e-52 | -8.615850e-47 |
Msa0593400 | Msa1361930 | 0.816101 | 6.579393e-52 | -8.615850e-47 |
Msa0593400 | Msa1362130 | 0.830427 | 2.954994e-55 | -8.615850e-47 |
Msa0593400 | Msa1364040 | 0.819317 | 1.237439e-52 | -8.615850e-47 |
Msa0593400 | Msa1364410 | 0.823053 | 1.703445e-53 | -8.615850e-47 |
Msa0593400 | Msa1364680 | 0.801261 | 9.786286e-49 | -8.615850e-47 |
Msa0593400 | Msa1364950 | 0.800265 | 1.562687e-48 | -8.615850e-47 |
Msa0593400 | Msa1365500 | 0.803709 | 3.062157e-49 | -8.615850e-47 |
Msa0593400 | Msa1366150 | 0.818893 | 1.545636e-52 | -8.615850e-47 |
Msa0593400 | Msa1367180 | 0.838162 | 3.386921e-57 | -8.615850e-47 |
Msa0593400 | Msa1368750 | 0.821136 | 4.739272e-53 | -8.615850e-47 |
Msa0593400 | Msa1374790 | 0.820288 | 7.424294e-53 | -8.615850e-47 |
Msa0593400 | Msa1375350 | 0.805795 | 1.123269e-49 | -8.615850e-47 |
Msa0593400 | Msa1380120 | 0.819704 | 1.009987e-52 | -8.615850e-47 |
Msa0593400 | Msa1381470 | 0.829425 | 5.186425e-55 | -8.615850e-47 |
Msa0593400 | Msa1384150 | 0.827674 | 1.372939e-54 | -8.615850e-47 |
Msa0593400 | Msa1387440 | 0.835325 | 1.791880e-56 | -8.615850e-47 |
Msa0593400 | Msa1393560 | 0.815927 | 7.194112e-52 | -8.615850e-47 |
Msa0593400 | Msa1400010 | 0.808163 | 3.543911e-50 | -8.615850e-47 |
Msa0593400 | Msa1406720 | 0.812992 | 3.207237e-51 | -8.615850e-47 |
Msa0593400 | Msa1409410 | 0.819291 | 1.254615e-52 | -8.615850e-47 |
Msa0593400 | Msa1417060 | 0.831367 | 1.738119e-55 | -8.615850e-47 |
Msa0593400 | Msa1426110 | 0.802431 | 5.628810e-49 | -8.615850e-47 |
Msa0593400 | Msa1426320 | 0.837278 | 5.712607e-57 | -8.615850e-47 |
Msa0593400 | Msa1429070 | 0.819910 | 9.061534e-53 | -8.615850e-47 |
Msa0593400 | Msa1435530 | 0.800919 | 1.150010e-48 | -8.615850e-47 |
Msa0593400 | Msa1437930 | 0.804385 | 2.215788e-49 | -8.615850e-47 |
Msa0593400 | Msa1442260 | 0.853885 | 1.777210e-61 | -8.615850e-47 |
Msa0593400 | Msa1445120 | 0.817402 | 3.359194e-52 | -8.615850e-47 |
Msa0593400 | Msa1446100 | 0.827047 | 1.940596e-54 | -8.615850e-47 |
Msa0593400 | Msa1447170 | 0.807697 | 4.453666e-50 | -8.615850e-47 |
Msa0593400 | Msa1450190 | 0.843900 | 1.054228e-58 | -8.615850e-47 |
Msa0593400 | Msa1451820 | 0.821808 | 3.315444e-53 | -8.615850e-47 |
Msa0593400 | Msa1453280 | 0.805605 | 1.231657e-49 | -8.615850e-47 |
Msa0593400 | Msa1454010 | 0.856020 | 4.265151e-62 | -8.615850e-47 |
Msa0593400 | Msa1457840 | 0.804383 | 2.217651e-49 | -8.615850e-47 |
Msa0593400 | Msa1465360 | 0.850646 | 1.484231e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593400 | MtrunA17_Chr4g0052681 | 96.154 | 546 | 21 | 0 | 1 | 546 | 51 | 596 | 0.0 | 1066 |
Msa0593400 | MtrunA17_Chr8g0383081 | 76.592 | 534 | 118 | 4 | 1 | 534 | 49 | 575 | 0.0 | 836 |
Msa0593400 | MtrunA17_Chr8g0383041 | 73.827 | 554 | 137 | 3 | 1 | 550 | 52 | 601 | 0.0 | 812 |
Msa0593400 | MtrunA17_Chr8g0383071 | 77.817 | 284 | 63 | 0 | 36 | 319 | 27 | 310 | 4.46e-162 | 463 |
Msa0593400 | MtrunA17_Chr8g0383051 | 70.722 | 263 | 74 | 3 | 1 | 261 | 64 | 325 | 3.71e-127 | 375 |
Msa0593400 | MtrunA17_Chr8g0383061 | 77.729 | 229 | 44 | 2 | 305 | 533 | 1 | 222 | 7.87e-114 | 337 |
Msa0593400 | MtrunA17_Chr8g0383211 | 37.037 | 540 | 312 | 11 | 2 | 527 | 127 | 652 | 1.09e-98 | 313 |
Msa0593400 | MtrunA17_Chr2g0308821 | 30.255 | 509 | 350 | 4 | 2 | 508 | 153 | 658 | 1.71e-82 | 270 |
Msa0593400 | MtrunA17_Chr8g0359341 | 32.283 | 508 | 325 | 6 | 8 | 510 | 215 | 708 | 1.17e-80 | 267 |
Msa0593400 | MtrunA17_Chr8g0383091 | 79.592 | 147 | 25 | 2 | 305 | 451 | 1 | 142 | 4.41e-76 | 237 |
Msa0593400 | MtrunA17_Chr7g0263231 | 29.762 | 504 | 345 | 6 | 8 | 508 | 571 | 1068 | 1.50e-74 | 256 |
Msa0593400 | MtrunA17_Chr8g0354631 | 28.977 | 528 | 346 | 11 | 2 | 508 | 183 | 702 | 2.90e-72 | 245 |
Msa0593400 | MtrunA17_Chr7g0263261 | 29.365 | 504 | 347 | 6 | 8 | 508 | 512 | 1009 | 3.49e-69 | 241 |
Msa0593400 | MtrunA17_Chr2g0333261 | 28.295 | 516 | 352 | 8 | 4 | 509 | 172 | 679 | 1.19e-68 | 234 |
Msa0593400 | MtrunA17_Chr4g0003151 | 27.969 | 522 | 346 | 9 | 1 | 508 | 154 | 659 | 2.18e-68 | 233 |
Msa0593400 | MtrunA17_Chr5g0402891 | 28.016 | 514 | 348 | 9 | 8 | 508 | 74 | 578 | 9.56e-67 | 228 |
Msa0593400 | MtrunA17_Chr4g0053391 | 40.604 | 298 | 153 | 5 | 255 | 552 | 1 | 274 | 4.72e-65 | 213 |
Msa0593400 | MtrunA17_Chr4g0052601 | 35.517 | 290 | 172 | 8 | 6 | 284 | 137 | 422 | 3.43e-45 | 165 |
Msa0593400 | MtrunA17_Chr1g0192041 | 40.854 | 164 | 97 | 0 | 214 | 377 | 68 | 231 | 1.22e-38 | 142 |
Msa0593400 | MtrunA17_Chr5g0408131 | 32.530 | 249 | 155 | 5 | 282 | 528 | 1 | 238 | 2.13e-35 | 133 |
Msa0593400 | MtrunA17_Chr4g0062411 | 23.810 | 546 | 362 | 13 | 6 | 540 | 170 | 672 | 9.98e-31 | 127 |
Msa0593400 | MtrunA17_Chr4g0052611 | 30.415 | 217 | 125 | 7 | 299 | 508 | 6 | 203 | 1.23e-21 | 94.4 |
Msa0593400 | MtrunA17_Chr8g0383171 | 31.122 | 196 | 123 | 4 | 327 | 520 | 58 | 243 | 2.52e-21 | 94.0 |
Msa0593400 | MtrunA17_Chr8g0383181 | 35.227 | 176 | 99 | 5 | 1 | 163 | 117 | 290 | 8.70e-21 | 93.2 |
Msa0593400 | MtrunA17_Chr3g0108001 | 40.179 | 112 | 53 | 2 | 441 | 552 | 6 | 103 | 3.81e-20 | 85.9 |
Msa0593400 | MtrunA17_Chr8g0390371 | 39.024 | 82 | 46 | 1 | 441 | 522 | 10 | 87 | 7.03e-16 | 73.2 |
Msa0593400 | MtrunA17_Chr1g0162951 | 50.980 | 51 | 25 | 0 | 461 | 511 | 1 | 51 | 1.32e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593400 | AT3G42170.2 | 32.245 | 490 | 293 | 7 | 28 | 508 | 193 | 652 | 3.72e-83 | 273 |
Msa0593400 | AT3G42170.1 | 32.245 | 490 | 293 | 7 | 28 | 508 | 215 | 674 | 3.83e-83 | 273 |
Msa0593400 | AT1G18560.1 | 23.574 | 526 | 338 | 16 | 6 | 508 | 165 | 649 | 1.51e-25 | 111 |
Find 95 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTTGTATTTATTTAATTT+TGG | 0.170612 | 4_2:-19608763 | Msa0593400:three_prime_UTR |
CTAGGAGGTATAGCAATATT+TGG | 0.187929 | 4_2:+19610619 | None:intergenic |
TAAAACTATATTTGGTTGTT+AGG | 0.235396 | 4_2:-19608703 | Msa0593400:three_prime_UTR |
TGAGCAAGTTTGAGAAATAT+TGG | 0.282910 | 4_2:-19609718 | Msa0593400:CDS |
GGCTTATTGTTATTCAAAAC+TGG | 0.302168 | 4_2:-19609630 | Msa0593400:CDS |
AGTGGCGGCAACGAGGGTTT+TGG | 0.307468 | 4_2:+19610957 | None:intergenic |
AAAGATAAAGATATTCTATT+AGG | 0.313785 | 4_2:+19610520 | None:intergenic |
CAGCAGCTTGTTACCAAAAC+TGG | 0.316408 | 4_2:-19609308 | Msa0593400:CDS |
TTACTTAGATGAGTCAGTTT+TGG | 0.319382 | 4_2:-19609267 | Msa0593400:CDS |
ATGTTGGCAGTTTCACAAAA+AGG | 0.324708 | 4_2:+19609866 | None:intergenic |
ATTTCCGGATCTATCAATAT+TGG | 0.329671 | 4_2:-19609186 | Msa0593400:CDS |
AAGTTGAGACTTTCCAGTTT+TGG | 0.333287 | 4_2:+19609295 | None:intergenic |
GAGTAATAATGATCGATTTC+CGG | 0.338529 | 4_2:-19609201 | Msa0593400:CDS |
TCAAATTGATTCACGCTTTG+TGG | 0.339742 | 4_2:-19610730 | Msa0593400:five_prime_UTR |
TAAGCCTCGATAACATTTCT+AGG | 0.352970 | 4_2:+19610601 | None:intergenic |
TGAGGCATTCAAAGAGTAGA+AGG | 0.355821 | 4_2:-19610111 | Msa0593400:CDS |
ATGCTATTTGAGAAGTATTC+TGG | 0.356538 | 4_2:-19609557 | Msa0593400:CDS |
ATGTGTTCTAGTTGATAGTT+TGG | 0.358328 | 4_2:-19609783 | Msa0593400:CDS |
AGATGAAGATATAAAGAAAA+TGG | 0.366301 | 4_2:-19609753 | Msa0593400:CDS |
GGTTGAGTTGTTGAATGATT+GGG | 0.368263 | 4_2:-19610356 | Msa0593400:CDS |
ATTTAAGGAGTGCGTTGAAC+AGG | 0.385664 | 4_2:-19610083 | Msa0593400:CDS |
GTTAATTGTTGTTTAAGCTT+AGG | 0.414274 | 4_2:+19610550 | None:intergenic |
TATAGTGTCGTTCTTGCATT+GGG | 0.424715 | 4_2:-19609689 | Msa0593400:CDS |
GAGCAAGCTTCTAATGACTT+TGG | 0.429442 | 4_2:-19608822 | Msa0593400:CDS |
GAGCAAGTTTGAGAAATATT+GGG | 0.431072 | 4_2:-19609717 | Msa0593400:CDS |
GTAATGGCATGCTAGAAGAT+TGG | 0.432053 | 4_2:+19609486 | None:intergenic |
GGTTGGTGGTGTTGATAGTT+CGG | 0.434477 | 4_2:-19610062 | Msa0593400:CDS |
TTTCTAATGTTTAATGTTGG+AGG | 0.437128 | 4_2:-19608595 | Msa0593400:three_prime_UTR |
TCTGGCAACAACACTTCTGC+TGG | 0.444439 | 4_2:-19609539 | Msa0593400:CDS |
GTCTCCGATGTCTCACGAAC+AGG | 0.445076 | 4_2:-19610904 | Msa0593400:intron |
TGGTTGAGTTGTTGAATGAT+TGG | 0.445907 | 4_2:-19610357 | Msa0593400:CDS |
ACGGAGAGGCAGACGGGGAG+TGG | 0.450858 | 4_2:+19610939 | None:intergenic |
TTGCTGTAGCTTCCTTTCAC+AGG | 0.452697 | 4_2:+19609598 | None:intergenic |
TAGTTCGGTTCGCTTACATT+TGG | 0.454929 | 4_2:-19610047 | Msa0593400:CDS |
ATCAGAAGCTACGGTGGCAA+TGG | 0.457714 | 4_2:+19609142 | None:intergenic |
TGTGTTCTAGTTGATAGTTT+GGG | 0.462965 | 4_2:-19609782 | Msa0593400:CDS |
TAGTTATGAATTATGTCCTT+CGG | 0.485944 | 4_2:-19609933 | Msa0593400:CDS |
TCAGAAGCTACGGTGGCAAT+GGG | 0.504779 | 4_2:+19609143 | None:intergenic |
ACGGGGAGTGGCGGCAACGA+GGG | 0.512006 | 4_2:+19610951 | None:intergenic |
TGACAAATCTCACCACTAGT+AGG | 0.517300 | 4_2:+19610385 | None:intergenic |
CAGGCCAATATTGATAGATC+CGG | 0.521638 | 4_2:+19609182 | None:intergenic |
GAATTGGAAGTTAAATAGTA+AGG | 0.521677 | 4_2:-19610434 | Msa0593400:CDS |
GAGAGGCAGACGGGGAGTGG+CGG | 0.522697 | 4_2:+19610942 | None:intergenic |
CAAAATGGGTTGTTATGTGA+TGG | 0.523049 | 4_2:-19610244 | Msa0593400:CDS |
GTGATGACGGAGAGGCAGAC+GGG | 0.525982 | 4_2:+19610933 | None:intergenic |
CTGGCAACAACACTTCTGCT+GGG | 0.527197 | 4_2:-19609538 | Msa0593400:CDS |
CTAGAATTTGTACTCGCAGT+TGG | 0.528677 | 4_2:-19609049 | Msa0593400:CDS |
AAATTAAAGTCTTTATCTCA+TGG | 0.532845 | 4_2:-19609458 | Msa0593400:CDS |
TTGAAAGAGCTCTTAAATAC+CGG | 0.537247 | 4_2:-19609988 | Msa0593400:CDS |
TGGTGAGATTTGTCAGAGAA+TGG | 0.537446 | 4_2:-19610377 | Msa0593400:CDS |
ATTCTAGCTTCCACATTCAT+CGG | 0.540479 | 4_2:+19609065 | None:intergenic |
GTATAGTGTCGTTCTTGCAT+TGG | 0.543770 | 4_2:-19609690 | Msa0593400:CDS |
TAAAGATATTCTATTAGGAA+TGG | 0.545385 | 4_2:+19610525 | None:intergenic |
CGGAGACGGCGGCGTGATGA+CGG | 0.550225 | 4_2:+19610920 | None:intergenic |
CAAATCTCACCACTAGTAGG+AGG | 0.556810 | 4_2:+19610388 | None:intergenic |
TGGGAGCGGTTCTTGACCCA+CGG | 0.559614 | 4_2:-19609670 | Msa0593400:CDS |
GTTGAGTTGTTGAATGATTG+GGG | 0.563887 | 4_2:-19610355 | Msa0593400:CDS |
CGTGATGACGGAGAGGCAGA+CGG | 0.564373 | 4_2:+19610932 | None:intergenic |
CTTGTTTACCCTCCTACTAG+TGG | 0.565610 | 4_2:-19610397 | Msa0593400:CDS |
TATGTCCTTCGGCAGAAGAG+TGG | 0.576340 | 4_2:-19609922 | Msa0593400:CDS |
TGTCGTTCTTGCATTGGGAG+CGG | 0.576416 | 4_2:-19609684 | Msa0593400:CDS |
ATATAAAGAAAATGGCTGAA+AGG | 0.580537 | 4_2:-19609745 | Msa0593400:CDS |
AAGGAGTGCGTTGAACAGGT+TGG | 0.580671 | 4_2:-19610079 | Msa0593400:CDS |
TGTTGTGCTATTAATCATGT+TGG | 0.585834 | 4_2:+19609850 | None:intergenic |
AAATTCAAAATCAGAAGCTA+CGG | 0.586576 | 4_2:+19609133 | None:intergenic |
TGGATGCATCAACCTGTGAA+AGG | 0.589753 | 4_2:-19609610 | Msa0593400:CDS |
AACTATCAACTAGAACACAT+TGG | 0.591548 | 4_2:+19609786 | None:intergenic |
AAGGTTGAAAACTTCATCCG+TGG | 0.593618 | 4_2:+19609653 | None:intergenic |
TGGCAACAACACTTCTGCTG+GGG | 0.603497 | 4_2:-19609537 | Msa0593400:CDS |
TCGTATGTTGCCGATGAATG+TGG | 0.606336 | 4_2:-19609075 | Msa0593400:CDS |
GAAAGGGCAAATCATGTGCA+AGG | 0.607899 | 4_2:+19610688 | None:intergenic |
AAATGGATGTATTACAATGG+TGG | 0.610990 | 4_2:-19609226 | Msa0593400:CDS |
TTCAAAATCAGAAGCTACGG+TGG | 0.614303 | 4_2:+19609136 | None:intergenic |
GGGAACACTTAACAAGTCGC+AGG | 0.614339 | 4_2:+19609163 | None:intergenic |
AATACCTGTTCGTGAGACAT+CGG | 0.616720 | 4_2:+19610900 | None:intergenic |
GAGTGCGTTGAACAGGTTGG+TGG | 0.617258 | 4_2:-19610076 | Msa0593400:CDS |
GACGGGGAGTGGCGGCAACG+AGG | 0.617549 | 4_2:+19610950 | None:intergenic |
AATATTTGGATTTAAGAACT+CGG | 0.621104 | 4_2:+19610633 | None:intergenic |
GAAAACTTTCGAACGCACAC+CGG | 0.621210 | 4_2:+19609969 | None:intergenic |
GATGGAGAAGACGACGACGA+TGG | 0.621975 | 4_2:-19608888 | Msa0593400:CDS |
GAGAGAGTATCATGTTTGTG+AGG | 0.628223 | 4_2:-19610129 | Msa0593400:CDS |
AAAGATAGAATTTGATAACG+AGG | 0.635017 | 4_2:-19610757 | Msa0593400:five_prime_UTR |
AGGTTGAAAACTTCATCCGT+GGG | 0.636207 | 4_2:+19609654 | None:intergenic |
ACCTCCTAGAAATGTTATCG+AGG | 0.637447 | 4_2:-19610605 | Msa0593400:CDS |
TGATGACGGAGAGGCAGACG+GGG | 0.638677 | 4_2:+19610934 | None:intergenic |
GAGGCATTCAAAGAGTAGAA+GGG | 0.641403 | 4_2:-19610110 | Msa0593400:CDS |
TAGTAGGAGGGTAAACAAGA+CGG | 0.651039 | 4_2:+19610401 | None:intergenic |
AAATCTCACCACTAGTAGGA+GGG | 0.654396 | 4_2:+19610389 | None:intergenic |
GCGTTAAAACTAGTTAGCTG+TGG | 0.661366 | 4_2:-19610166 | Msa0593400:CDS |
TGTTCGTGAGACATCGGAGA+CGG | 0.666236 | 4_2:+19610906 | None:intergenic |
GCCTCGATAACATTTCTAGG+AGG | 0.669214 | 4_2:+19610604 | None:intergenic |
ACGGCGGCGTGATGACGGAG+AGG | 0.685732 | 4_2:+19610925 | None:intergenic |
TCGTGAGACATCGGAGACGG+CGG | 0.696783 | 4_2:+19610909 | None:intergenic |
CAGAAATGGATGTATTACAA+TGG | 0.706453 | 4_2:-19609229 | Msa0593400:CDS |
ATTCGCGTCAACAAAATGAG+CGG | 0.717347 | 4_2:+19610453 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTAAGTTTTTATATATTTTT+TGG | - | chr4_2:19610092-19610111 | Msa0593400:CDS | 10.0% |
!!! | GTAAGTTTTTATATATTTTT+TGG | - | chr4_2:19610092-19610111 | Msa0593400:CDS | 10.0% |
!! | AAAGATAAAGATATTCTATT+AGG | + | chr4_2:19609000-19609019 | None:intergenic | 15.0% |
!! | TATAAAAACTTACATCAAAT+AGG | + | chr4_2:19610085-19610104 | None:intergenic | 15.0% |
!!! | TGCTTGTATTTATTTAATTT+TGG | - | chr4_2:19610754-19610773 | Msa0593400:five_prime_UTR | 15.0% |
!!! | TAAAACTTTCAATACATTTT+TGG | - | chr4_2:19610961-19610980 | Msa0593400:five_prime_UTR | 15.0% |
!! | AAAGATAAAGATATTCTATT+AGG | + | chr4_2:19609000-19609019 | None:intergenic | 15.0% |
!! | TATAAAAACTTACATCAAAT+AGG | + | chr4_2:19610085-19610104 | None:intergenic | 15.0% |
!!! | TGCTTGTATTTATTTAATTT+TGG | - | chr4_2:19610754-19610773 | Msa0593400:five_prime_UTR | 15.0% |
!!! | TAAAACTTTCAATACATTTT+TGG | - | chr4_2:19610961-19610980 | Msa0593400:five_prime_UTR | 15.0% |
!! | AATATTTGGATTTAAGAACT+CGG | + | chr4_2:19608887-19608906 | None:intergenic | 20.0% |
!! | TAAAGATATTCTATTAGGAA+TGG | + | chr4_2:19608995-19609014 | None:intergenic | 20.0% |
!!! | TATCTTTATCTTTTGATTTG+TGG | - | chr4_2:19609007-19609026 | Msa0593400:intron | 20.0% |
!!! | ATCTTTATCTTTTGATTTGT+GGG | - | chr4_2:19609008-19609027 | Msa0593400:intron | 20.0% |
!! | AACTTGTAAAAAATACAAGT+TGG | + | chr4_2:19609703-19609722 | None:intergenic | 20.0% |
!!! | ACTTGTATTTTTTACAAGTT+TGG | - | chr4_2:19609703-19609722 | Msa0593400:CDS | 20.0% |
!! | AGATGAAGATATAAAGAAAA+TGG | - | chr4_2:19609764-19609783 | Msa0593400:CDS | 20.0% |
!!! | GACTTTAATTTCTTTTGTAA+TGG | + | chr4_2:19610050-19610069 | None:intergenic | 20.0% |
!! | AAATTAAAGTCTTTATCTCA+TGG | - | chr4_2:19610059-19610078 | Msa0593400:CDS | 20.0% |
!! | TTAATAACTAAATTTACCCA+TGG | + | chr4_2:19610588-19610607 | None:intergenic | 20.0% |
!!! | TCATGTTTGTTTTAGATTTA+TGG | - | chr4_2:19610781-19610800 | Msa0593400:five_prime_UTR | 20.0% |
!! | TAAAACTATATTTGGTTGTT+AGG | - | chr4_2:19610814-19610833 | Msa0593400:intron | 20.0% |
!! | AATATTTGGATTTAAGAACT+CGG | + | chr4_2:19608887-19608906 | None:intergenic | 20.0% |
!! | TAAAGATATTCTATTAGGAA+TGG | + | chr4_2:19608995-19609014 | None:intergenic | 20.0% |
!!! | TATCTTTATCTTTTGATTTG+TGG | - | chr4_2:19609007-19609026 | Msa0593400:intron | 20.0% |
!!! | ATCTTTATCTTTTGATTTGT+GGG | - | chr4_2:19609008-19609027 | Msa0593400:intron | 20.0% |
!! | AACTTGTAAAAAATACAAGT+TGG | + | chr4_2:19609703-19609722 | None:intergenic | 20.0% |
!!! | ACTTGTATTTTTTACAAGTT+TGG | - | chr4_2:19609703-19609722 | Msa0593400:CDS | 20.0% |
!! | AGATGAAGATATAAAGAAAA+TGG | - | chr4_2:19609764-19609783 | Msa0593400:CDS | 20.0% |
!!! | GACTTTAATTTCTTTTGTAA+TGG | + | chr4_2:19610050-19610069 | None:intergenic | 20.0% |
!! | AAATTAAAGTCTTTATCTCA+TGG | - | chr4_2:19610059-19610078 | Msa0593400:CDS | 20.0% |
!! | TTAATAACTAAATTTACCCA+TGG | + | chr4_2:19610588-19610607 | None:intergenic | 20.0% |
!!! | TCATGTTTGTTTTAGATTTA+TGG | - | chr4_2:19610781-19610800 | Msa0593400:five_prime_UTR | 20.0% |
!! | TAAAACTATATTTGGTTGTT+AGG | - | chr4_2:19610814-19610833 | Msa0593400:intron | 20.0% |
!!! | AAAGATAGAATTTGATAACG+AGG | - | chr4_2:19608760-19608779 | Msa0593400:three_prime_UTR | 25.0% |
!!! | GTTAATTGTTGTTTAAGCTT+AGG | + | chr4_2:19608970-19608989 | None:intergenic | 25.0% |
! | GAATTGGAAGTTAAATAGTA+AGG | - | chr4_2:19609083-19609102 | Msa0593400:CDS | 25.0% |
! | TAGTTATGAATTATGTCCTT+CGG | - | chr4_2:19609584-19609603 | Msa0593400:CDS | 25.0% |
!! | AAAAAATACAAGTTGGAAGT+AGG | + | chr4_2:19609696-19609715 | None:intergenic | 25.0% |
! | ATATAAAGAAAATGGCTGAA+AGG | - | chr4_2:19609772-19609791 | Msa0593400:CDS | 25.0% |
!! | TTTTGAATAACAATAAGCCA+AGG | + | chr4_2:19609886-19609905 | None:intergenic | 25.0% |
! | ATTACATTTCACAAGTGAAA+AGG | + | chr4_2:19610169-19610188 | None:intergenic | 25.0% |
! | TTTCACTTGTGAAATGTAAT+AGG | - | chr4_2:19610169-19610188 | Msa0593400:CDS | 25.0% |
! | AAATTCAAAATCAGAAGCTA+CGG | + | chr4_2:19610387-19610406 | None:intergenic | 25.0% |
!! | TTCTGATTTTGAATTTTGCA+TGG | - | chr4_2:19610391-19610410 | Msa0593400:CDS | 25.0% |
!! | TCTGATTTTGAATTTTGCAT+GGG | - | chr4_2:19610392-19610411 | Msa0593400:CDS | 25.0% |
!! | TTGTACAATTTTGTTAGTGA+GGG | - | chr4_2:19610491-19610510 | Msa0593400:CDS | 25.0% |
!!! | TTGTATTGTTTTGATAACCA+TGG | - | chr4_2:19610568-19610587 | Msa0593400:CDS | 25.0% |
!!! | TGTATTGTTTTGATAACCAT+GGG | - | chr4_2:19610569-19610588 | Msa0593400:CDS | 25.0% |
! | CTTCAATTATGATATGTAGA+TGG | - | chr4_2:19610611-19610630 | Msa0593400:CDS | 25.0% |
! | AATCGACAATGATGAAAAAA+TGG | - | chr4_2:19610673-19610692 | Msa0593400:five_prime_UTR | 25.0% |
!!! | TGTTTTTAACTTGTAGTATG+TGG | - | chr4_2:19610888-19610907 | Msa0593400:intron | 25.0% |
!! | GCTTTTCTAATGTTTAATGT+TGG | - | chr4_2:19610919-19610938 | Msa0593400:five_prime_UTR | 25.0% |
! | TTTCTAATGTTTAATGTTGG+AGG | - | chr4_2:19610922-19610941 | Msa0593400:five_prime_UTR | 25.0% |
!!! | AAAGATAGAATTTGATAACG+AGG | - | chr4_2:19608760-19608779 | Msa0593400:three_prime_UTR | 25.0% |
!!! | GTTAATTGTTGTTTAAGCTT+AGG | + | chr4_2:19608970-19608989 | None:intergenic | 25.0% |
! | GAATTGGAAGTTAAATAGTA+AGG | - | chr4_2:19609083-19609102 | Msa0593400:CDS | 25.0% |
! | TAGTTATGAATTATGTCCTT+CGG | - | chr4_2:19609584-19609603 | Msa0593400:CDS | 25.0% |
!! | AAAAAATACAAGTTGGAAGT+AGG | + | chr4_2:19609696-19609715 | None:intergenic | 25.0% |
! | ATATAAAGAAAATGGCTGAA+AGG | - | chr4_2:19609772-19609791 | Msa0593400:CDS | 25.0% |
!! | TTTTGAATAACAATAAGCCA+AGG | + | chr4_2:19609886-19609905 | None:intergenic | 25.0% |
! | ATTACATTTCACAAGTGAAA+AGG | + | chr4_2:19610169-19610188 | None:intergenic | 25.0% |
! | TTTCACTTGTGAAATGTAAT+AGG | - | chr4_2:19610169-19610188 | Msa0593400:CDS | 25.0% |
! | AAATTCAAAATCAGAAGCTA+CGG | + | chr4_2:19610387-19610406 | None:intergenic | 25.0% |
!! | TTCTGATTTTGAATTTTGCA+TGG | - | chr4_2:19610391-19610410 | Msa0593400:CDS | 25.0% |
!! | TCTGATTTTGAATTTTGCAT+GGG | - | chr4_2:19610392-19610411 | Msa0593400:CDS | 25.0% |
!! | TTGTACAATTTTGTTAGTGA+GGG | - | chr4_2:19610491-19610510 | Msa0593400:CDS | 25.0% |
!!! | TTGTATTGTTTTGATAACCA+TGG | - | chr4_2:19610568-19610587 | Msa0593400:CDS | 25.0% |
!!! | TGTATTGTTTTGATAACCAT+GGG | - | chr4_2:19610569-19610588 | Msa0593400:CDS | 25.0% |
! | CTTCAATTATGATATGTAGA+TGG | - | chr4_2:19610611-19610630 | Msa0593400:CDS | 25.0% |
! | AATCGACAATGATGAAAAAA+TGG | - | chr4_2:19610673-19610692 | Msa0593400:five_prime_UTR | 25.0% |
!!! | TGTTTTTAACTTGTAGTATG+TGG | - | chr4_2:19610888-19610907 | Msa0593400:intron | 25.0% |
!! | GCTTTTCTAATGTTTAATGT+TGG | - | chr4_2:19610919-19610938 | Msa0593400:five_prime_UTR | 25.0% |
! | TTTCTAATGTTTAATGTTGG+AGG | - | chr4_2:19610922-19610941 | Msa0593400:five_prime_UTR | 25.0% |
GAGTAGAAGGGAAAAATTTA+AGG | - | chr4_2:19609419-19609438 | Msa0593400:intron | 30.0% | |
TTGAAAGAGCTCTTAAATAC+CGG | - | chr4_2:19609529-19609548 | Msa0593400:CDS | 30.0% | |
! | TGTTGTGCTATTAATCATGT+TGG | + | chr4_2:19609670-19609689 | None:intergenic | 30.0% |
AACTATCAACTAGAACACAT+TGG | + | chr4_2:19609734-19609753 | None:intergenic | 30.0% | |
!! | ATGTGTTCTAGTTGATAGTT+TGG | - | chr4_2:19609734-19609753 | Msa0593400:CDS | 30.0% |
!! | TGTGTTCTAGTTGATAGTTT+GGG | - | chr4_2:19609735-19609754 | Msa0593400:CDS | 30.0% |
TGAGCAAGTTTGAGAAATAT+TGG | - | chr4_2:19609799-19609818 | Msa0593400:CDS | 30.0% | |
GAGCAAGTTTGAGAAATATT+GGG | - | chr4_2:19609800-19609819 | Msa0593400:CDS | 30.0% | |
! | GGCTTATTGTTATTCAAAAC+TGG | - | chr4_2:19609887-19609906 | Msa0593400:CDS | 30.0% |
!! | ATGCTATTTGAGAAGTATTC+TGG | - | chr4_2:19609960-19609979 | Msa0593400:CDS | 30.0% |
!! | AAGAACTTTTAAGGAGAATC+AGG | - | chr4_2:19610007-19610026 | Msa0593400:CDS | 30.0% |
! | TTGAATTTGTTTAACCTCGT+TGG | - | chr4_2:19610140-19610159 | Msa0593400:CDS | 30.0% |
! | TTACTTAGATGAGTCAGTTT+TGG | - | chr4_2:19610250-19610269 | Msa0593400:CDS | 30.0% |
! | TTTTCGTTGTTATGCAGAAA+TGG | - | chr4_2:19610274-19610293 | Msa0593400:CDS | 30.0% |
CAGAAATGGATGTATTACAA+TGG | - | chr4_2:19610288-19610307 | Msa0593400:CDS | 30.0% | |
AAATGGATGTATTACAATGG+TGG | - | chr4_2:19610291-19610310 | Msa0593400:CDS | 30.0% | |
! | GAGTAATAATGATCGATTTC+CGG | - | chr4_2:19610316-19610335 | Msa0593400:CDS | 30.0% |
ATTTCCGGATCTATCAATAT+TGG | - | chr4_2:19610331-19610350 | Msa0593400:CDS | 30.0% | |
! | GTTGTACAATTTTGTTAGTG+AGG | - | chr4_2:19610490-19610509 | Msa0593400:CDS | 30.0% |
! | GTTATGATTTCTGCATTTTC+TGG | - | chr4_2:19610836-19610855 | Msa0593400:intron | 30.0% |
GAGTAGAAGGGAAAAATTTA+AGG | - | chr4_2:19609419-19609438 | Msa0593400:intron | 30.0% | |
TTGAAAGAGCTCTTAAATAC+CGG | - | chr4_2:19609529-19609548 | Msa0593400:CDS | 30.0% | |
! | TGTTGTGCTATTAATCATGT+TGG | + | chr4_2:19609670-19609689 | None:intergenic | 30.0% |
AACTATCAACTAGAACACAT+TGG | + | chr4_2:19609734-19609753 | None:intergenic | 30.0% | |
!! | ATGTGTTCTAGTTGATAGTT+TGG | - | chr4_2:19609734-19609753 | Msa0593400:CDS | 30.0% |
!! | TGTGTTCTAGTTGATAGTTT+GGG | - | chr4_2:19609735-19609754 | Msa0593400:CDS | 30.0% |
TGAGCAAGTTTGAGAAATAT+TGG | - | chr4_2:19609799-19609818 | Msa0593400:CDS | 30.0% | |
GAGCAAGTTTGAGAAATATT+GGG | - | chr4_2:19609800-19609819 | Msa0593400:CDS | 30.0% | |
! | GGCTTATTGTTATTCAAAAC+TGG | - | chr4_2:19609887-19609906 | Msa0593400:CDS | 30.0% |
!! | ATGCTATTTGAGAAGTATTC+TGG | - | chr4_2:19609960-19609979 | Msa0593400:CDS | 30.0% |
!! | AAGAACTTTTAAGGAGAATC+AGG | - | chr4_2:19610007-19610026 | Msa0593400:CDS | 30.0% |
! | TTGAATTTGTTTAACCTCGT+TGG | - | chr4_2:19610140-19610159 | Msa0593400:CDS | 30.0% |
! | TTACTTAGATGAGTCAGTTT+TGG | - | chr4_2:19610250-19610269 | Msa0593400:CDS | 30.0% |
! | TTTTCGTTGTTATGCAGAAA+TGG | - | chr4_2:19610274-19610293 | Msa0593400:CDS | 30.0% |
CAGAAATGGATGTATTACAA+TGG | - | chr4_2:19610288-19610307 | Msa0593400:CDS | 30.0% | |
AAATGGATGTATTACAATGG+TGG | - | chr4_2:19610291-19610310 | Msa0593400:CDS | 30.0% | |
! | GAGTAATAATGATCGATTTC+CGG | - | chr4_2:19610316-19610335 | Msa0593400:CDS | 30.0% |
ATTTCCGGATCTATCAATAT+TGG | - | chr4_2:19610331-19610350 | Msa0593400:CDS | 30.0% | |
! | GTTGTACAATTTTGTTAGTG+AGG | - | chr4_2:19610490-19610509 | Msa0593400:CDS | 30.0% |
! | GTTATGATTTCTGCATTTTC+TGG | - | chr4_2:19610836-19610855 | Msa0593400:intron | 30.0% |
ACAATGCTGAAATGTAACCT+AGG | - | chr4_2:19608715-19608734 | Msa0593400:three_prime_UTR | 35.0% | |
AGACATTTCTTCGAATACCT+AGG | + | chr4_2:19608735-19608754 | None:intergenic | 35.0% | |
! | TCAAATTGATTCACGCTTTG+TGG | - | chr4_2:19608787-19608806 | Msa0593400:exon | 35.0% |
! | CTAGGAGGTATAGCAATATT+TGG | + | chr4_2:19608901-19608920 | None:intergenic | 35.0% |
TAAGCCTCGATAACATTTCT+AGG | + | chr4_2:19608919-19608938 | None:intergenic | 35.0% | |
! | TGGTTGAGTTGTTGAATGAT+TGG | - | chr4_2:19609160-19609179 | Msa0593400:CDS | 35.0% |
! | GGTTGAGTTGTTGAATGATT+GGG | - | chr4_2:19609161-19609180 | Msa0593400:CDS | 35.0% |
! | GTTGAGTTGTTGAATGATTG+GGG | - | chr4_2:19609162-19609181 | Msa0593400:CDS | 35.0% |
!!! | AGCCAACTTGTTTTGCAAAA+TGG | - | chr4_2:19609258-19609277 | Msa0593400:CDS | 35.0% |
!!! | GCCAACTTGTTTTGCAAAAT+GGG | - | chr4_2:19609259-19609278 | Msa0593400:CDS | 35.0% |
! | ACCCATTTTGCAAAACAAGT+TGG | + | chr4_2:19609263-19609282 | None:intergenic | 35.0% |
!! | CAAAATGGGTTGTTATGTGA+TGG | - | chr4_2:19609273-19609292 | Msa0593400:CDS | 35.0% |
ATGTTGGCAGTTTCACAAAA+AGG | + | chr4_2:19609654-19609673 | None:intergenic | 35.0% | |
! | TATAGTGTCGTTCTTGCATT+GGG | - | chr4_2:19609828-19609847 | Msa0593400:CDS | 35.0% |
! | TGGGGTTCAAAGAACTTTTA+AGG | - | chr4_2:19609998-19610017 | Msa0593400:CDS | 35.0% |
! | AAGTTGAGACTTTCCAGTTT+TGG | + | chr4_2:19610225-19610244 | None:intergenic | 35.0% |
!! | ATTCTAGCTTCCACATTCAT+CGG | + | chr4_2:19610455-19610474 | None:intergenic | 35.0% |
ACAATGCTGAAATGTAACCT+AGG | - | chr4_2:19608715-19608734 | Msa0593400:three_prime_UTR | 35.0% | |
AGACATTTCTTCGAATACCT+AGG | + | chr4_2:19608735-19608754 | None:intergenic | 35.0% | |
! | TCAAATTGATTCACGCTTTG+TGG | - | chr4_2:19608787-19608806 | Msa0593400:exon | 35.0% |
! | CTAGGAGGTATAGCAATATT+TGG | + | chr4_2:19608901-19608920 | None:intergenic | 35.0% |
TAAGCCTCGATAACATTTCT+AGG | + | chr4_2:19608919-19608938 | None:intergenic | 35.0% | |
! | TGGTTGAGTTGTTGAATGAT+TGG | - | chr4_2:19609160-19609179 | Msa0593400:CDS | 35.0% |
! | GGTTGAGTTGTTGAATGATT+GGG | - | chr4_2:19609161-19609180 | Msa0593400:CDS | 35.0% |
! | GTTGAGTTGTTGAATGATTG+GGG | - | chr4_2:19609162-19609181 | Msa0593400:CDS | 35.0% |
!!! | AGCCAACTTGTTTTGCAAAA+TGG | - | chr4_2:19609258-19609277 | Msa0593400:CDS | 35.0% |
!!! | GCCAACTTGTTTTGCAAAAT+GGG | - | chr4_2:19609259-19609278 | Msa0593400:CDS | 35.0% |
! | ACCCATTTTGCAAAACAAGT+TGG | + | chr4_2:19609263-19609282 | None:intergenic | 35.0% |
!! | CAAAATGGGTTGTTATGTGA+TGG | - | chr4_2:19609273-19609292 | Msa0593400:CDS | 35.0% |
ATGTTGGCAGTTTCACAAAA+AGG | + | chr4_2:19609654-19609673 | None:intergenic | 35.0% | |
! | TATAGTGTCGTTCTTGCATT+GGG | - | chr4_2:19609828-19609847 | Msa0593400:CDS | 35.0% |
! | TGGGGTTCAAAGAACTTTTA+AGG | - | chr4_2:19609998-19610017 | Msa0593400:CDS | 35.0% |
! | AAGTTGAGACTTTCCAGTTT+TGG | + | chr4_2:19610225-19610244 | None:intergenic | 35.0% |
!! | ATTCTAGCTTCCACATTCAT+CGG | + | chr4_2:19610455-19610474 | None:intergenic | 35.0% |
AATACCTGTTCGTGAGACAT+CGG | + | chr4_2:19608620-19608639 | None:intergenic | 40.0% | |
CTCGAGCTCGAAAAATGAAA+GGG | + | chr4_2:19608848-19608867 | None:intergenic | 40.0% | |
!!! | CTTTCATTTTTCGAGCTCGA+GGG | - | chr4_2:19608847-19608866 | Msa0593400:CDS | 40.0% |
ACCTCCTAGAAATGTTATCG+AGG | - | chr4_2:19608912-19608931 | Msa0593400:intron | 40.0% | |
ATTCGCGTCAACAAAATGAG+CGG | + | chr4_2:19609067-19609086 | None:intergenic | 40.0% | |
! | CTCATTTTGTTGACGCGAAT+TGG | - | chr4_2:19609067-19609086 | Msa0593400:CDS | 40.0% |
TAGTAGGAGGGTAAACAAGA+CGG | + | chr4_2:19609119-19609138 | None:intergenic | 40.0% | |
AAATCTCACCACTAGTAGGA+GGG | + | chr4_2:19609131-19609150 | None:intergenic | 40.0% | |
TGACAAATCTCACCACTAGT+AGG | + | chr4_2:19609135-19609154 | None:intergenic | 40.0% | |
TGGTGAGATTTGTCAGAGAA+TGG | - | chr4_2:19609140-19609159 | Msa0593400:CDS | 40.0% | |
GCGTTAAAACTAGTTAGCTG+TGG | - | chr4_2:19609351-19609370 | Msa0593400:intron | 40.0% | |
!! | GAGAGAGTATCATGTTTGTG+AGG | - | chr4_2:19609388-19609407 | Msa0593400:intron | 40.0% |
! | TGAGGCATTCAAAGAGTAGA+AGG | - | chr4_2:19609406-19609425 | Msa0593400:intron | 40.0% |
! | GAGGCATTCAAAGAGTAGAA+GGG | - | chr4_2:19609407-19609426 | Msa0593400:intron | 40.0% |
! | ATTTAAGGAGTGCGTTGAAC+AGG | - | chr4_2:19609434-19609453 | Msa0593400:intron | 40.0% |
! | TAGTTCGGTTCGCTTACATT+TGG | - | chr4_2:19609470-19609489 | Msa0593400:CDS | 40.0% |
! | GTATAGTGTCGTTCTTGCAT+TGG | - | chr4_2:19609827-19609846 | Msa0593400:CDS | 40.0% |
AGGTTGAAAACTTCATCCGT+GGG | + | chr4_2:19609866-19609885 | None:intergenic | 40.0% | |
AAGGTTGAAAACTTCATCCG+TGG | + | chr4_2:19609867-19609886 | None:intergenic | 40.0% | |
! | ACGGATGAAGTTTTCAACCT+TGG | - | chr4_2:19609866-19609885 | Msa0593400:CDS | 40.0% |
GTAATGGCATGCTAGAAGAT+TGG | + | chr4_2:19610034-19610053 | None:intergenic | 40.0% | |
AAGTGAAAAGGAAACCAACG+AGG | + | chr4_2:19610157-19610176 | None:intergenic | 40.0% | |
!! | TTTTGGTAACAAGCTGCTGA+TGG | + | chr4_2:19610208-19610227 | None:intergenic | 40.0% |
CAGGCCAATATTGATAGATC+CGG | + | chr4_2:19610338-19610357 | None:intergenic | 40.0% | |
TTCAAAATCAGAAGCTACGG+TGG | + | chr4_2:19610384-19610403 | None:intergenic | 40.0% | |
CTAGAATTTGTACTCGCAGT+TGG | - | chr4_2:19610468-19610487 | Msa0593400:CDS | 40.0% | |
GAGCAAGCTTCTAATGACTT+TGG | - | chr4_2:19610695-19610714 | Msa0593400:five_prime_UTR | 40.0% | |
AATACCTGTTCGTGAGACAT+CGG | + | chr4_2:19608620-19608639 | None:intergenic | 40.0% | |
CTCGAGCTCGAAAAATGAAA+GGG | + | chr4_2:19608848-19608867 | None:intergenic | 40.0% | |
!!! | CTTTCATTTTTCGAGCTCGA+GGG | - | chr4_2:19608847-19608866 | Msa0593400:CDS | 40.0% |
ACCTCCTAGAAATGTTATCG+AGG | - | chr4_2:19608912-19608931 | Msa0593400:intron | 40.0% | |
ATTCGCGTCAACAAAATGAG+CGG | + | chr4_2:19609067-19609086 | None:intergenic | 40.0% | |
! | CTCATTTTGTTGACGCGAAT+TGG | - | chr4_2:19609067-19609086 | Msa0593400:CDS | 40.0% |
TAGTAGGAGGGTAAACAAGA+CGG | + | chr4_2:19609119-19609138 | None:intergenic | 40.0% | |
AAATCTCACCACTAGTAGGA+GGG | + | chr4_2:19609131-19609150 | None:intergenic | 40.0% | |
TGACAAATCTCACCACTAGT+AGG | + | chr4_2:19609135-19609154 | None:intergenic | 40.0% | |
TGGTGAGATTTGTCAGAGAA+TGG | - | chr4_2:19609140-19609159 | Msa0593400:CDS | 40.0% | |
GCGTTAAAACTAGTTAGCTG+TGG | - | chr4_2:19609351-19609370 | Msa0593400:intron | 40.0% | |
!! | GAGAGAGTATCATGTTTGTG+AGG | - | chr4_2:19609388-19609407 | Msa0593400:intron | 40.0% |
! | TGAGGCATTCAAAGAGTAGA+AGG | - | chr4_2:19609406-19609425 | Msa0593400:intron | 40.0% |
! | GAGGCATTCAAAGAGTAGAA+GGG | - | chr4_2:19609407-19609426 | Msa0593400:intron | 40.0% |
! | ATTTAAGGAGTGCGTTGAAC+AGG | - | chr4_2:19609434-19609453 | Msa0593400:intron | 40.0% |
! | TAGTTCGGTTCGCTTACATT+TGG | - | chr4_2:19609470-19609489 | Msa0593400:CDS | 40.0% |
! | GTATAGTGTCGTTCTTGCAT+TGG | - | chr4_2:19609827-19609846 | Msa0593400:CDS | 40.0% |
AGGTTGAAAACTTCATCCGT+GGG | + | chr4_2:19609866-19609885 | None:intergenic | 40.0% | |
AAGGTTGAAAACTTCATCCG+TGG | + | chr4_2:19609867-19609886 | None:intergenic | 40.0% | |
! | ACGGATGAAGTTTTCAACCT+TGG | - | chr4_2:19609866-19609885 | Msa0593400:CDS | 40.0% |
GTAATGGCATGCTAGAAGAT+TGG | + | chr4_2:19610034-19610053 | None:intergenic | 40.0% | |
AAGTGAAAAGGAAACCAACG+AGG | + | chr4_2:19610157-19610176 | None:intergenic | 40.0% | |
!! | TTTTGGTAACAAGCTGCTGA+TGG | + | chr4_2:19610208-19610227 | None:intergenic | 40.0% |
CAGGCCAATATTGATAGATC+CGG | + | chr4_2:19610338-19610357 | None:intergenic | 40.0% | |
TTCAAAATCAGAAGCTACGG+TGG | + | chr4_2:19610384-19610403 | None:intergenic | 40.0% | |
CTAGAATTTGTACTCGCAGT+TGG | - | chr4_2:19610468-19610487 | Msa0593400:CDS | 40.0% | |
GAGCAAGCTTCTAATGACTT+TGG | - | chr4_2:19610695-19610714 | Msa0593400:five_prime_UTR | 40.0% | |
GAAAGGGCAAATCATGTGCA+AGG | + | chr4_2:19608832-19608851 | None:intergenic | 45.0% | |
CCTCGAGCTCGAAAAATGAA+AGG | + | chr4_2:19608849-19608868 | None:intergenic | 45.0% | |
!!! | CCTTTCATTTTTCGAGCTCG+AGG | - | chr4_2:19608846-19608865 | Msa0593400:CDS | 45.0% |
! | GCCTCGATAACATTTCTAGG+AGG | + | chr4_2:19608916-19608935 | None:intergenic | 45.0% |
CTTGTTTACCCTCCTACTAG+TGG | - | chr4_2:19609120-19609139 | Msa0593400:CDS | 45.0% | |
CAAATCTCACCACTAGTAGG+AGG | + | chr4_2:19609132-19609151 | None:intergenic | 45.0% | |
!! | GGTTGGTGGTGTTGATAGTT+CGG | - | chr4_2:19609455-19609474 | Msa0593400:CDS | 45.0% |
GAAAACTTTCGAACGCACAC+CGG | + | chr4_2:19609551-19609570 | None:intergenic | 45.0% | |
TGGATGCATCAACCTGTGAA+AGG | - | chr4_2:19609907-19609926 | Msa0593400:CDS | 45.0% | |
TTGCTGTAGCTTCCTTTCAC+AGG | + | chr4_2:19609922-19609941 | None:intergenic | 45.0% | |
!! | CAGCAGCTTGTTACCAAAAC+TGG | - | chr4_2:19610209-19610228 | Msa0593400:CDS | 45.0% |
TCGTATGTTGCCGATGAATG+TGG | - | chr4_2:19610442-19610461 | Msa0593400:CDS | 45.0% | |
GAAAGGGCAAATCATGTGCA+AGG | + | chr4_2:19608832-19608851 | None:intergenic | 45.0% | |
CCTCGAGCTCGAAAAATGAA+AGG | + | chr4_2:19608849-19608868 | None:intergenic | 45.0% | |
!!! | CCTTTCATTTTTCGAGCTCG+AGG | - | chr4_2:19608846-19608865 | Msa0593400:CDS | 45.0% |
! | GCCTCGATAACATTTCTAGG+AGG | + | chr4_2:19608916-19608935 | None:intergenic | 45.0% |
CTTGTTTACCCTCCTACTAG+TGG | - | chr4_2:19609120-19609139 | Msa0593400:CDS | 45.0% | |
CAAATCTCACCACTAGTAGG+AGG | + | chr4_2:19609132-19609151 | None:intergenic | 45.0% | |
!! | GGTTGGTGGTGTTGATAGTT+CGG | - | chr4_2:19609455-19609474 | Msa0593400:CDS | 45.0% |
GAAAACTTTCGAACGCACAC+CGG | + | chr4_2:19609551-19609570 | None:intergenic | 45.0% | |
TGGATGCATCAACCTGTGAA+AGG | - | chr4_2:19609907-19609926 | Msa0593400:CDS | 45.0% | |
TTGCTGTAGCTTCCTTTCAC+AGG | + | chr4_2:19609922-19609941 | None:intergenic | 45.0% | |
!! | CAGCAGCTTGTTACCAAAAC+TGG | - | chr4_2:19610209-19610228 | Msa0593400:CDS | 45.0% |
TCGTATGTTGCCGATGAATG+TGG | - | chr4_2:19610442-19610461 | Msa0593400:CDS | 45.0% | |
!! | TAAAAAATTAAAACTATATT+TGG | - | chr4_2:19610806-19610825 | Msa0593400:intron | 5.0% |
!! | TAAAAAATTAAAACTATATT+TGG | - | chr4_2:19610806-19610825 | Msa0593400:intron | 5.0% |
TGTTCGTGAGACATCGGAGA+CGG | + | chr4_2:19608614-19608633 | None:intergenic | 50.0% | |
!! | TTTTCGAGCTCGAGGGAATG+AGG | - | chr4_2:19608854-19608873 | Msa0593400:CDS | 50.0% |
! | AAGGAGTGCGTTGAACAGGT+TGG | - | chr4_2:19609438-19609457 | Msa0593400:intron | 50.0% |
TATGTCCTTCGGCAGAAGAG+TGG | - | chr4_2:19609595-19609614 | Msa0593400:CDS | 50.0% | |
! | CTTTTCCACTCTTCTGCCGA+AGG | + | chr4_2:19609603-19609622 | None:intergenic | 50.0% |
TGTCGTTCTTGCATTGGGAG+CGG | - | chr4_2:19609833-19609852 | Msa0593400:CDS | 50.0% | |
TCTGGCAACAACACTTCTGC+TGG | - | chr4_2:19609978-19609997 | Msa0593400:CDS | 50.0% | |
CTGGCAACAACACTTCTGCT+GGG | - | chr4_2:19609979-19609998 | Msa0593400:CDS | 50.0% | |
TGGCAACAACACTTCTGCTG+GGG | - | chr4_2:19609980-19609999 | Msa0593400:CDS | 50.0% | |
GGGAACACTTAACAAGTCGC+AGG | + | chr4_2:19610357-19610376 | None:intergenic | 50.0% | |
TCAGAAGCTACGGTGGCAAT+GGG | + | chr4_2:19610377-19610396 | None:intergenic | 50.0% | |
ATCAGAAGCTACGGTGGCAA+TGG | + | chr4_2:19610378-19610397 | None:intergenic | 50.0% | |
TGTTCGTGAGACATCGGAGA+CGG | + | chr4_2:19608614-19608633 | None:intergenic | 50.0% | |
!! | TTTTCGAGCTCGAGGGAATG+AGG | - | chr4_2:19608854-19608873 | Msa0593400:CDS | 50.0% |
! | AAGGAGTGCGTTGAACAGGT+TGG | - | chr4_2:19609438-19609457 | Msa0593400:intron | 50.0% |
TATGTCCTTCGGCAGAAGAG+TGG | - | chr4_2:19609595-19609614 | Msa0593400:CDS | 50.0% | |
! | CTTTTCCACTCTTCTGCCGA+AGG | + | chr4_2:19609603-19609622 | None:intergenic | 50.0% |
TGTCGTTCTTGCATTGGGAG+CGG | - | chr4_2:19609833-19609852 | Msa0593400:CDS | 50.0% | |
TCTGGCAACAACACTTCTGC+TGG | - | chr4_2:19609978-19609997 | Msa0593400:CDS | 50.0% | |
CTGGCAACAACACTTCTGCT+GGG | - | chr4_2:19609979-19609998 | Msa0593400:CDS | 50.0% | |
TGGCAACAACACTTCTGCTG+GGG | - | chr4_2:19609980-19609999 | Msa0593400:CDS | 50.0% | |
GGGAACACTTAACAAGTCGC+AGG | + | chr4_2:19610357-19610376 | None:intergenic | 50.0% | |
TCAGAAGCTACGGTGGCAAT+GGG | + | chr4_2:19610377-19610396 | None:intergenic | 50.0% | |
ATCAGAAGCTACGGTGGCAA+TGG | + | chr4_2:19610378-19610397 | None:intergenic | 50.0% | |
GTCTCCGATGTCTCACGAAC+AGG | - | chr4_2:19608613-19608632 | Msa0593400:three_prime_UTR | 55.0% | |
! | GAGTGCGTTGAACAGGTTGG+TGG | - | chr4_2:19609441-19609460 | Msa0593400:intron | 55.0% |
GATGGAGAAGACGACGACGA+TGG | - | chr4_2:19610629-19610648 | Msa0593400:CDS | 55.0% | |
GTCTCCGATGTCTCACGAAC+AGG | - | chr4_2:19608613-19608632 | Msa0593400:three_prime_UTR | 55.0% | |
! | GAGTGCGTTGAACAGGTTGG+TGG | - | chr4_2:19609441-19609460 | Msa0593400:intron | 55.0% |
GATGGAGAAGACGACGACGA+TGG | - | chr4_2:19610629-19610648 | Msa0593400:CDS | 55.0% | |
! | AGTGGCGGCAACGAGGGTTT+TGG | + | chr4_2:19608563-19608582 | None:intergenic | 60.0% |
!! | TGATGACGGAGAGGCAGACG+GGG | + | chr4_2:19608586-19608605 | None:intergenic | 60.0% |
!! | GTGATGACGGAGAGGCAGAC+GGG | + | chr4_2:19608587-19608606 | None:intergenic | 60.0% |
!! | CGTGATGACGGAGAGGCAGA+CGG | + | chr4_2:19608588-19608607 | None:intergenic | 60.0% |
TCGTGAGACATCGGAGACGG+CGG | + | chr4_2:19608611-19608630 | None:intergenic | 60.0% | |
TGGGAGCGGTTCTTGACCCA+CGG | - | chr4_2:19609847-19609866 | Msa0593400:CDS | 60.0% | |
!! | GAGGGTTTTGGCGGGAATCG+CGG | + | chr4_2:19608551-19608570 | None:intergenic | 60.0% |
! | AGTGGCGGCAACGAGGGTTT+TGG | + | chr4_2:19608563-19608582 | None:intergenic | 60.0% |
!! | TGATGACGGAGAGGCAGACG+GGG | + | chr4_2:19608586-19608605 | None:intergenic | 60.0% |
!! | GTGATGACGGAGAGGCAGAC+GGG | + | chr4_2:19608587-19608606 | None:intergenic | 60.0% |
!! | CGTGATGACGGAGAGGCAGA+CGG | + | chr4_2:19608588-19608607 | None:intergenic | 60.0% |
TCGTGAGACATCGGAGACGG+CGG | + | chr4_2:19608611-19608630 | None:intergenic | 60.0% | |
TGGGAGCGGTTCTTGACCCA+CGG | - | chr4_2:19609847-19609866 | Msa0593400:CDS | 60.0% | |
!! | GCGGCAACGAGGGTTTTGGC+GGG | + | chr4_2:19608559-19608578 | None:intergenic | 65.0% |
!! | GGCGGCAACGAGGGTTTTGG+CGG | + | chr4_2:19608560-19608579 | None:intergenic | 65.0% |
!! | GCGGCAACGAGGGTTTTGGC+GGG | + | chr4_2:19608559-19608578 | None:intergenic | 65.0% |
!! | GGCGGCAACGAGGGTTTTGG+CGG | + | chr4_2:19608560-19608579 | None:intergenic | 65.0% |
ACGGGGAGTGGCGGCAACGA+GGG | + | chr4_2:19608569-19608588 | None:intergenic | 70.0% | |
GAGAGGCAGACGGGGAGTGG+CGG | + | chr4_2:19608578-19608597 | None:intergenic | 70.0% | |
ACGGAGAGGCAGACGGGGAG+TGG | + | chr4_2:19608581-19608600 | None:intergenic | 70.0% | |
!! | ACGGCGGCGTGATGACGGAG+AGG | + | chr4_2:19608595-19608614 | None:intergenic | 70.0% |
CGGAGACGGCGGCGTGATGA+CGG | + | chr4_2:19608600-19608619 | None:intergenic | 70.0% | |
ACGGGGAGTGGCGGCAACGA+GGG | + | chr4_2:19608569-19608588 | None:intergenic | 70.0% | |
GAGAGGCAGACGGGGAGTGG+CGG | + | chr4_2:19608578-19608597 | None:intergenic | 70.0% | |
ACGGAGAGGCAGACGGGGAG+TGG | + | chr4_2:19608581-19608600 | None:intergenic | 70.0% | |
!! | ACGGCGGCGTGATGACGGAG+AGG | + | chr4_2:19608595-19608614 | None:intergenic | 70.0% |
CGGAGACGGCGGCGTGATGA+CGG | + | chr4_2:19608600-19608619 | None:intergenic | 70.0% | |
GACGGGGAGTGGCGGCAACG+AGG | + | chr4_2:19608570-19608589 | None:intergenic | 75.0% | |
GACGGGGAGTGGCGGCAACG+AGG | + | chr4_2:19608570-19608589 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 19608549 | 19610990 | 19608549 | ID=Msa0593400;Name=Msa0593400 |
chr4_2 | mRNA | 19608549 | 19610990 | 19608549 | ID=Msa0593400-mRNA-1;Parent=Msa0593400;Name=Msa0593400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=220|1|1|1|1|0.75|4|239|554 |
chr4_2 | exon | 19608549 | 19608909 | 19608549 | ID=Msa0593400-mRNA-1:exon:5612;Parent=Msa0593400-mRNA-1 |
chr4_2 | exon | 19609027 | 19609348 | 19609027 | ID=Msa0593400-mRNA-1:exon:5611;Parent=Msa0593400-mRNA-1 |
chr4_2 | exon | 19609448 | 19610802 | 19609448 | ID=Msa0593400-mRNA-1:exon:5610;Parent=Msa0593400-mRNA-1 |
chr4_2 | exon | 19610905 | 19610990 | 19610905 | ID=Msa0593400-mRNA-1:exon:5609;Parent=Msa0593400-mRNA-1 |
chr4_2 | five_prime_UTR | 19610905 | 19610990 | 19610905 | ID=Msa0593400-mRNA-1:five_prime_utr;Parent=Msa0593400-mRNA-1 |
chr4_2 | five_prime_UTR | 19610669 | 19610802 | 19610669 | ID=Msa0593400-mRNA-1:five_prime_utr;Parent=Msa0593400-mRNA-1 |
chr4_2 | CDS | 19609448 | 19610668 | 19609448 | ID=Msa0593400-mRNA-1:cds;Parent=Msa0593400-mRNA-1 |
chr4_2 | CDS | 19609027 | 19609348 | 19609027 | ID=Msa0593400-mRNA-1:cds;Parent=Msa0593400-mRNA-1 |
chr4_2 | CDS | 19608788 | 19608909 | 19608788 | ID=Msa0593400-mRNA-1:cds;Parent=Msa0593400-mRNA-1 |
chr4_2 | three_prime_UTR | 19608549 | 19608787 | 19608549 | ID=Msa0593400-mRNA-1:three_prime_utr;Parent=Msa0593400-mRNA-1 |
Gene Sequence |
Protein sequence |