AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218820 MtrunA17_Chr4g0068511 99.785 929 2 0 1 929 1 929 0.0 1922
Msa1218820 MtrunA17_Chr4g0065401 33.792 654 378 10 216 838 35 664 8.03e-106 344
Msa1218820 MtrunA17_Chr4g0035581 34.206 611 348 10 238 819 152 737 3.11e-102 338
Msa1218820 MtrunA17_Chr4g0052131 38.534 532 294 8 319 819 109 638 6.16e-102 335
Msa1218820 MtrunA17_Chr7g0269941 36.932 528 298 8 304 819 131 635 6.77e-102 333
Msa1218820 MtrunA17_Chr8g0381871 32.929 659 370 12 220 827 20 657 2.11e-97 325
Msa1218820 MtrunA17_Chr2g0296441 31.994 672 377 12 206 827 7 648 7.69e-96 319
Msa1218820 MtrunA17_Chr7g0263661 30.560 661 369 21 231 823 67 705 3.08e-87 296
Msa1218820 MtrunA17_Chr2g0279361 32.953 613 363 16 254 839 41 632 9.21e-84 283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218820 AT1G44900.1 75.628 915 208 6 19 924 20 928 0.0 1363
Msa1218820 AT1G44900.2 75.519 915 207 7 19 924 20 926 0.0 1355
Msa1218820 AT2G16440.1 36.788 579 320 9 266 819 187 744 3.45e-108 354
Msa1218820 AT5G46280.3 39.155 521 288 9 326 819 112 630 5.82e-104 338
Msa1218820 AT5G46280.1 39.155 521 288 9 326 819 112 630 4.02e-103 339
Msa1218820 AT5G46280.2 39.686 509 278 9 326 807 112 618 1.06e-101 330
Msa1218820 AT4G02060.2 36.484 529 301 7 318 834 143 648 5.73e-100 329
Msa1218820 AT4G02060.1 36.484 529 301 7 318 834 143 648 5.73e-100 329
Msa1218820 AT2G07690.1 33.129 652 371 12 219 835 34 655 5.24e-97 321
Msa1218820 AT5G44635.1 35.130 575 305 8 302 827 104 659 1.91e-96 322
Msa1218820 AT5G44635.2 35.315 572 302 8 305 827 107 659 3.72e-96 322
Msa1218820 AT2G07690.2 33.180 654 366 13 219 835 34 653 3.97e-96 318
Msa1218820 AT3G09660.3 33.756 631 350 21 253 823 76 698 1.10e-90 306
Msa1218820 AT5G46280.4 40.263 457 247 8 326 758 112 566 1.28e-90 299
Msa1218820 AT3G09660.2 33.596 634 350 21 253 823 76 701 1.97e-90 304
Msa1218820 AT3G09660.1 33.596 634 350 21 253 823 76 701 3.55e-90 305
Msa1218820 AT2G14050.1 33.892 537 323 13 315 839 117 633 2.16e-82 280
Msa1218820 AT2G14050.2 33.892 537 323 13 315 839 117 633 4.57e-82 278

Find 255 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGAGGAGATTGAAAATT+TGG 0.095183 8_1:-81481294 Msa1218820:CDS
CAAAACTGGCATTTGAAAAT+TGG 0.153921 8_1:+81478978 None:intergenic
TTCTTTATCCAATTCAAAAT+TGG 0.206236 8_1:+81479069 None:intergenic
TGGCAAATGTGGGGCAGTTT+TGG 0.218412 8_1:-81482041 Msa1218820:CDS
TTCATTTCTACCCAAAAGTT+TGG 0.226481 8_1:-81479605 Msa1218820:CDS
ACCTAATAGCCACTGGGTTT+GGG 0.226975 8_1:-81478803 Msa1218820:three_prime_UTR
CTTTCTGCACCCCAAACTTT+TGG 0.230169 8_1:+81479594 None:intergenic
AAGTCTCCATGTTCATTCTT+TGG 0.238314 8_1:+81482581 None:intergenic
AATTGAGACTTTGCTGTTCC+TGG 0.255092 8_1:+81481021 None:intergenic
AGTCTCCATGTTCATTCTTT+GGG 0.267432 8_1:+81482582 None:intergenic
AACCTAATAGCCACTGGGTT+TGG 0.273545 8_1:-81478804 Msa1218820:three_prime_UTR
TAAGAGAAATCTCTTGATAT+TGG 0.279896 8_1:+81478699 None:intergenic
AACAAACCCTTTCTCCAATT+CGG 0.287874 8_1:+81481261 None:intergenic
AAGAGTGGAATAGATGTAAT+TGG 0.289609 8_1:-81478656 Msa1218820:three_prime_UTR
GAGTGTCTTTGTGACCTTCC+AGG 0.294919 8_1:+81482874 None:intergenic
CACTGGGTTTGGGGCCAGTA+TGG 0.299860 8_1:-81478793 Msa1218820:three_prime_UTR
GTTACCTGATATTTCGAATC+TGG 0.302067 8_1:+81482235 None:intergenic
TCATTTCTACCCAAAAGTTT+GGG 0.303343 8_1:-81479604 Msa1218820:CDS
GAAAACCATTCTTTGTGTTC+AGG 0.303531 8_1:+81481399 None:intergenic
ACAAACCCTTTCTCCAATTC+GGG 0.303751 8_1:+81481262 None:intergenic
CCCCAAACCCAGTGGCTATT+AGG 0.319417 8_1:+81478802 None:intergenic
GTCTTCCTGTGTAAGTTTGT+AGG 0.319705 8_1:+81481316 None:intergenic
ACAGTTACAGGCCCTCTAAA+AGG 0.321403 8_1:-81482960 Msa1218820:CDS
GAAGGTGAGGTAGGTGAATC+GGG 0.326947 8_1:+81483876 None:intergenic
TTGAATACAATGATTCGAAT+TGG 0.329550 8_1:-81482124 Msa1218820:CDS
CGTAACCAATGCTTTGCATT+TGG 0.340686 8_1:-81479302 Msa1218820:CDS
TGAATACAATGATTCGAATT+GGG 0.341206 8_1:-81482123 Msa1218820:CDS
CGTCCTGCAGGAACTATTCC+AGG 0.341724 8_1:+81481621 None:intergenic
TAAGAAATCCTTGAATTTCC+TGG 0.343353 8_1:+81482619 None:intergenic
GACATAAATGTTCTTCTTCT+CGG 0.346340 8_1:-81481048 Msa1218820:CDS
GCAATAGCCTTAGCTATGTT+TGG 0.350626 8_1:-81481114 Msa1218820:CDS
CTATACTATAGACAATTTAC+AGG 0.358359 8_1:-81481674 Msa1218820:intron
TGGTTCGTCGCGGATGATAT+CGG 0.359451 8_1:+81483776 None:intergenic
TCTTCCTCTTCCTCTGGATC+TGG 0.362332 8_1:+81483756 None:intergenic
CTATTCTATATTAGTCTGAT+TGG 0.365042 8_1:-81478878 Msa1218820:three_prime_UTR
TGGAATTGTCACATCTCTTC+AGG 0.367117 8_1:-81480573 Msa1218820:CDS
ATGACCAGATTCGAAATATC+AGG 0.373434 8_1:-81482239 Msa1218820:intron
CATACTTAACCTGTTGCAAC+TGG 0.373595 8_1:+81482068 None:intergenic
ACAGGCACCGGGCACCATAC+TGG 0.374113 8_1:+81478779 None:intergenic
AAAGAGGAGATTGAAAATTT+GGG 0.375378 8_1:-81481293 Msa1218820:CDS
ATCGGTTGGGTTGGATGATT+CGG 0.379357 8_1:-81483554 Msa1218820:CDS
TCTCCATCTTCCTCTTCCTC+TGG 0.382680 8_1:+81483750 None:intergenic
TTCGAATCATTGTATTCAAA+TGG 0.384715 8_1:+81482128 None:intergenic
TTCTTCATCCAATACAAAAC+TGG 0.387332 8_1:+81478964 None:intergenic
GTGAACGTAGAGTGCATCTA+TGG 0.389929 8_1:-81478915 Msa1218820:three_prime_UTR
GTCTGAGATGCATTCGCGCA+TGG 0.390090 8_1:+81479681 None:intergenic
CCCTTGTGACTGGATCTTTG+TGG 0.390521 8_1:+81480824 None:intergenic
TGTAGCTAACAAGTGCAGTT+TGG 0.400718 8_1:-81482442 Msa1218820:intron
ATATCGAAACGAGAAATAAT+AGG 0.402565 8_1:+81480312 None:intergenic
TTTCGAATCTGGTCATAAAC+TGG 0.404720 8_1:+81482246 None:intergenic
CTGAGGAAGTTTAGAGCGAT+TGG 0.408232 8_1:+81483447 None:intergenic
TGGCAAAGGGGCATCTGCTG+TGG 0.410494 8_1:-81480863 Msa1218820:CDS
TCCATTGCTCCATCAATCTA+TGG 0.416379 8_1:-81481156 Msa1218820:CDS
GTTCTTCTTCTCGGTGATCC+AGG 0.417275 8_1:-81481039 Msa1218820:CDS
GGAAGGTGAGGTAGGTGAAT+CGG 0.421992 8_1:+81483875 None:intergenic
ATACGGATGATGACAGTTAC+AGG 0.426652 8_1:-81482972 Msa1218820:CDS
TTTGCTTACCTCCCTCCAAT+TGG 0.430391 8_1:+81480521 None:intergenic
TGGCATGCCAGATGCATCTT+GGG 0.430722 8_1:+81480094 None:intergenic
ATCGTCTTCAGATGCGCGGC+TGG 0.430731 8_1:+81483815 None:intergenic
TTCAAGGAACTCTTAGAGAA+TGG 0.434661 8_1:-81482673 Msa1218820:CDS
GGTTCGTCGCGGATGATATC+GGG 0.435345 8_1:+81483777 None:intergenic
TCTGCTGCTCCATGGCTTCA+TGG 0.436038 8_1:+81480615 None:intergenic
AGCTAGCCAAATGGCAATGT+TGG 0.437518 8_1:+81482386 None:intergenic
ACTAGTGTTAATTACCTTGA+AGG 0.439442 8_1:+81479216 None:intergenic
AAAACCATTCTTTGTGTTCA+GGG 0.440084 8_1:+81481400 None:intergenic
TCCATCCCAACATTGCCATT+TGG 0.443662 8_1:-81482392 Msa1218820:CDS
TCATCGTGACCATAGATTGA+TGG 0.444357 8_1:+81481147 None:intergenic
CATCTACTTTGATATCTACA+TGG 0.455001 8_1:+81479245 None:intergenic
TTGGCATGCCAGATGCATCT+TGG 0.460989 8_1:+81480093 None:intergenic
ACAAGGGAATGGACCCTTGA+GGG 0.463606 8_1:-81480808 Msa1218820:CDS
GGAGTTGTAACCAGGCGCTC+TGG 0.464061 8_1:-81482100 Msa1218820:CDS
CATTGCATCTATGAGCGTTA+AGG 0.465349 8_1:+81478585 None:intergenic
GGCAAAGGGGCATCTGCTGT+GGG 0.469869 8_1:-81480862 Msa1218820:CDS
ATCCACAATCCAACAGGCAC+CGG 0.473893 8_1:+81478767 None:intergenic
AGTAGATGATCTCTCCTTCA+AGG 0.474470 8_1:-81479230 Msa1218820:intron
AGGGTCCATTCCCTTGTGAC+TGG 0.475877 8_1:+81480814 None:intergenic
TATGAGATGTACCGTGTTCA+AGG 0.476676 8_1:-81482689 Msa1218820:CDS
CAATCAGACTAATATAGAAT+AGG 0.478187 8_1:+81478879 None:intergenic
GTATGGTGCCCGGTGCCTGT+TGG 0.479156 8_1:-81478776 Msa1218820:three_prime_UTR
TTACCTCCCTCCAATTGGAT+TGG 0.479361 8_1:+81480526 None:intergenic
TCTGAGATGCATTCGCGCAT+GGG 0.480022 8_1:+81479682 None:intergenic
TTTCATAGCCAGGAAATTCA+AGG 0.480432 8_1:-81482627 Msa1218820:CDS
GGTCAAGAAAAGAATGTTGA+AGG 0.480571 8_1:-81481090 Msa1218820:CDS
ATTGCTGCTGCCAATCCAAT+TGG 0.480683 8_1:-81480536 Msa1218820:CDS
CATTTGGAAGACATTCTCAC+TGG 0.481401 8_1:-81479286 Msa1218820:CDS
AATCAGCATCATGTAACCTT+GGG 0.481849 8_1:+81479907 None:intergenic
TCACTTCAAGTCACAACCTA+AGG 0.481858 8_1:-81480144 Msa1218820:CDS
GTTCACTGTCAATATTGAAC+AGG 0.481960 8_1:-81481948 Msa1218820:intron
TCAAGGAACTCTTAGAGAAT+GGG 0.482239 8_1:-81482672 Msa1218820:CDS
CGAACCAGATCCAGAGGAAG+AGG 0.485773 8_1:-81483760 Msa1218820:CDS
CCGATCAGTTCGAATCGGTT+GGG 0.487780 8_1:-81483567 Msa1218820:CDS
CAGTTACAGGCCCTCTAAAA+GGG 0.492794 8_1:-81482959 Msa1218820:CDS
CTGTATACACCACTGGCAAA+GGG 0.493275 8_1:-81480876 Msa1218820:CDS
ATTACTTCTAAAACAGAATG+AGG 0.493415 8_1:+81482357 None:intergenic
CTGATTGACTGTGCTCGACC+TGG 0.494038 8_1:-81481561 Msa1218820:CDS
CCGAGTGACGATGATCTTGA+TGG 0.494509 8_1:-81482910 Msa1218820:CDS
GCAAGCATTTCATCAGTGAC+TGG 0.494579 8_1:+81480185 None:intergenic
TTCAATGTGCCTTACAGCGA+TGG 0.494731 8_1:+81479727 None:intergenic
GGGGAAAACTCCAGAGCGCC+TGG 0.494777 8_1:+81482090 None:intergenic
AAGTGCGCCGTTTCATAGCC+AGG 0.495372 8_1:-81482637 Msa1218820:CDS
TCTTATTCAGAGGTGAAAGT+TGG 0.496205 8_1:-81482001 Msa1218820:CDS
GCCGATCAGTTCGAATCGGT+TGG 0.497145 8_1:-81483568 Msa1218820:CDS
GGCACATTGAATCAATGATA+AGG 0.501245 8_1:-81479715 Msa1218820:CDS
AAATCAGCATCATGTAACCT+TGG 0.502494 8_1:+81479906 None:intergenic
AGCGAGTCCCAAGATGCATC+TGG 0.502747 8_1:-81480101 Msa1218820:CDS
GTCTTCCAAATGCAAAGCAT+TGG 0.502858 8_1:+81479297 None:intergenic
GAATACAATGATTCGAATTG+GGG 0.503038 8_1:-81482122 Msa1218820:CDS
TTGTCCCTGAACACAAAGAA+TGG 0.503280 8_1:-81481404 Msa1218820:CDS
CTGGTCATAAACTGGTAAGT+TGG 0.504195 8_1:+81482254 None:intergenic
TGCTCATTTATATTCTCCGT+GGG 0.504409 8_1:-81479327 Msa1218820:CDS
GAGTCATTGTTACCACCCTT+AGG 0.504496 8_1:+81480128 None:intergenic
TTTGGGGCCAGTATGGTGCC+CGG 0.504537 8_1:-81478786 Msa1218820:three_prime_UTR
GCTAGCCAAATGGCAATGTT+GGG 0.504935 8_1:+81482387 None:intergenic
CCTTGGGAAAACATTCAACT+TGG 0.505272 8_1:+81479923 None:intergenic
TGAATTTCCTGGCTATGAAA+CGG 0.505781 8_1:+81482630 None:intergenic
TGTCCTGAGTGTCAATCAAA+AGG 0.507261 8_1:-81481974 Msa1218820:CDS
AGCATAAGCATATCAAAAGC+TGG 0.507543 8_1:-81480593 Msa1218820:CDS
AGAAGACCTGTGATCAGCTC+TGG 0.507814 8_1:+81482936 None:intergenic
CAGACGATCCACAATCCAAC+AGG 0.508919 8_1:+81478761 None:intergenic
GTGAGGACCTCTGGGTCAGT+TGG 0.510672 8_1:+81480074 None:intergenic
AGCAAATACATAACATTCAA+AGG 0.513388 8_1:+81478854 None:intergenic
CTGATAAGTGAAATGGTGTC+AGG 0.514144 8_1:-81482545 Msa1218820:intron
AAGGAGTCCCCATCGCTGTA+AGG 0.515892 8_1:-81479736 Msa1218820:CDS
GCTTATGCTCTGCTGCTCCA+TGG 0.516044 8_1:+81480607 None:intergenic
GAGCTAGAAGAGAAGAATCA+TGG 0.516515 8_1:-81483922 Msa1218820:exon
GATCCAGAGGAAGAGGAAGA+TGG 0.518113 8_1:-81483753 Msa1218820:CDS
TCAGTTCGAATCGGTTGGGT+TGG 0.522218 8_1:-81483563 Msa1218820:CDS
AAGTTGATCGGTGTTAAAAC+CGG 0.523985 8_1:+81483851 None:intergenic
CCTAATAGCCACTGGGTTTG+GGG 0.525134 8_1:-81478802 Msa1218820:three_prime_UTR
TATCTCGGCAGTCGTCCTGC+AGG 0.528983 8_1:+81481609 None:intergenic
GCTGTATACACCACTGGCAA+AGG 0.529151 8_1:-81480877 Msa1218820:CDS
GGTGCAGAAAGCACTGCAAA+AGG 0.532915 8_1:-81479582 Msa1218820:intron
CTCACTCTTCAAGAGAGCCC+TGG 0.535554 8_1:-81481639 Msa1218820:CDS
AAATATGCTGCTGTTGAAGA+AGG 0.537530 8_1:+81479099 None:intergenic
TCCTCTGTCAGCTAGAACAA+GGG 0.542346 8_1:+81480780 None:intergenic
AGCAGATGCCCCTTTGCCAG+TGG 0.542513 8_1:+81480867 None:intergenic
AGTATCACTTCCTTGTATCT+CGG 0.542848 8_1:+81481594 None:intergenic
TGGGTTGGATGATTCGGTTG+AGG 0.542927 8_1:-81483548 Msa1218820:CDS
AAATGAGGATGATCAATATG+AGG 0.542946 8_1:-81482824 Msa1218820:intron
AGGACGACTGCCGAGATACA+AGG 0.546392 8_1:-81481604 Msa1218820:CDS
CGATATCCTCTGCGTTGTGA+AGG 0.548274 8_1:-81480295 Msa1218820:intron
TCCACAATCCAACAGGCACC+GGG 0.549026 8_1:+81478768 None:intergenic
GCCCGGTGCCTGTTGGATTG+TGG 0.549433 8_1:-81478769 Msa1218820:three_prime_UTR
TCAATGTGCCTTACAGCGAT+GGG 0.550127 8_1:+81479728 None:intergenic
TACTTAACCTGTTGCAACTG+GGG 0.551301 8_1:+81482070 None:intergenic
TTCCTCTGTCAGCTAGAACA+AGG 0.553579 8_1:+81480779 None:intergenic
TTGACCTCCAAACATAGCTA+AGG 0.554023 8_1:+81481107 None:intergenic
GATCTTACAATCTCTTCTCC+AGG 0.555605 8_1:+81481543 None:intergenic
CTCTAAGAGTTCCTTGAACA+CGG 0.557484 8_1:+81482678 None:intergenic
AAGTATGACTGTGGCAAATG+TGG 0.558528 8_1:-81482052 Msa1218820:CDS
TGTGCGTCTGATAAGTGAAA+TGG 0.559703 8_1:-81482552 Msa1218820:CDS
CGTAGCCTGTGAGTATGTGA+TGG 0.560020 8_1:-81478556 Msa1218820:three_prime_UTR
AGGTGCATCAGCTAGCCAAA+TGG 0.560236 8_1:+81482377 None:intergenic
ATAGCCTTAGCTATGTTTGG+AGG 0.560247 8_1:-81481111 Msa1218820:CDS
ATTGGTTGCTGTTGAACAAG+GGG 0.562474 8_1:+81478996 None:intergenic
GCTGCTGCCAATCCAATTGG+AGG 0.564451 8_1:-81480533 Msa1218820:CDS
AGCCCTGGAATAGTTCCTGC+AGG 0.565620 8_1:-81481624 Msa1218820:CDS
AACAGTGATTATCAGAGGAT+GGG 0.566353 8_1:-81483595 Msa1218820:intron
ATGCTCATTTATATTCTCCG+TGG 0.566494 8_1:-81479328 Msa1218820:CDS
AAGATCCAGTCACAAGGGAA+TGG 0.567232 8_1:-81480819 Msa1218820:CDS
TCTCTTGTTTAGCACGGACA+AGG 0.568024 8_1:-81479755 Msa1218820:intron
GAACAGTGATTATCAGAGGA+TGG 0.570324 8_1:-81483596 Msa1218820:intron
TCCAACTACTGATCAAAATG+AGG 0.571804 8_1:-81482839 Msa1218820:CDS
TACTTCTTCAACAGATCTTG+AGG 0.573458 8_1:+81479957 None:intergenic
GCCAAATGGCAATGTTGGGA+TGG 0.574556 8_1:+81482391 None:intergenic
GTCAAGAAAAGAATGTTGAA+GGG 0.576184 8_1:-81481089 Msa1218820:CDS
GCATGTCATACAAGAGGATG+TGG 0.578147 8_1:-81479657 Msa1218820:CDS
ATACTTAACCTGTTGCAACT+GGG 0.578409 8_1:+81482069 None:intergenic
AAAGGGCCAGAGCTGATCAC+AGG 0.581068 8_1:-81482942 Msa1218820:CDS
ACAGAACAGTCAAGAAAGAG+TGG 0.582965 8_1:-81478671 Msa1218820:three_prime_UTR
ATCTACTTTGATATCTACAT+GGG 0.586006 8_1:+81479246 None:intergenic
ACAAGATGAATGACCAGGAT+CGG 0.587394 8_1:-81480735 Msa1218820:intron
TGAAGCCGATCAGTTCGAAT+CGG 0.588426 8_1:-81483572 Msa1218820:CDS
AGTATGACTGTGGCAAATGT+GGG 0.588814 8_1:-81482051 Msa1218820:CDS
AAATTGGTTGCTGTTGAACA+AGG 0.588962 8_1:+81478994 None:intergenic
AAGGGAATGGACCCTTGAGG+GGG 0.591353 8_1:-81480806 Msa1218820:CDS
GTTTAGAGCGATTGGAAGCG+CGG 0.591434 8_1:+81483455 None:intergenic
GCGCGGCTGGTGTGAGTGTG+AGG 0.592379 8_1:+81483828 None:intergenic
ATTTGACAAGATGAATGACC+AGG 0.592449 8_1:-81480740 Msa1218820:CDS
GTATGTGATGGGTTCTATTG+TGG 0.593711 8_1:-81478544 Msa1218820:three_prime_UTR
ACCATAGATTGATGGAGCAA+TGG 0.593829 8_1:+81481155 None:intergenic
CATACAAGAGGATGTGGACA+TGG 0.595431 8_1:-81479651 Msa1218820:CDS
TAAGTTTGTAGGCAGAGAAG+AGG 0.596527 8_1:+81481327 None:intergenic
CATTTCTACCCAAAAGTTTG+GGG 0.599413 8_1:-81479603 Msa1218820:CDS
CCATCAAGATCATCGTCACT+CGG 0.600308 8_1:+81482910 None:intergenic
GTTAAAACCGGCGGAAGGTG+AGG 0.602963 8_1:+81483863 None:intergenic
CTCTGCCTACAAACTTACAC+AGG 0.603392 8_1:-81481321 Msa1218820:CDS
GGTAAGTATCCATGAAGCCA+TGG 0.605274 8_1:-81480624 Msa1218820:CDS
CACTTCAAGTCACAACCTAA+GGG 0.605500 8_1:-81480143 Msa1218820:CDS
ACTTACACAGGAAGACAAAG+AGG 0.607054 8_1:-81481309 Msa1218820:CDS
GAAATGGTTTACCTCCGTCA+TGG 0.607967 8_1:+81483419 None:intergenic
CAGAGAGCTGTATACACCAC+TGG 0.608206 8_1:-81480883 Msa1218820:CDS
TCACCTACCTCACCTTCCGC+CGG 0.609324 8_1:-81483870 Msa1218820:CDS
GAAGGTCACAAAGACACTCA+AGG 0.609959 8_1:-81482870 Msa1218820:CDS
TCCACAAAGATCCAGTCACA+AGG 0.613359 8_1:-81480825 Msa1218820:CDS
AAACCGGCGGAAGGTGAGGT+AGG 0.615670 8_1:+81483867 None:intergenic
GGATGAATAGTTCACCTGGA+AGG 0.618854 8_1:-81482888 Msa1218820:CDS
GATGCACTCTACGTTCACCT+AGG 0.619069 8_1:+81478920 None:intergenic
ACTTAACCTGTTGCAACTGG+GGG 0.621176 8_1:+81482071 None:intergenic
TTATCAGACATTATCTCACT+AGG 0.621430 8_1:-81479039 Msa1218820:CDS
CTGCTGCCAATCCAATTGGA+GGG 0.622054 8_1:-81480532 Msa1218820:CDS
GTCCTGCAGGAACTATTCCA+GGG 0.622175 8_1:+81481622 None:intergenic
GATGGGATGAATAGTTCACC+TGG 0.623036 8_1:-81482892 Msa1218820:CDS
AGAACCCATCACATACTCAC+AGG 0.623430 8_1:+81478551 None:intergenic
AAGCATTGGTTACGAGCCCA+CGG 0.623624 8_1:+81479311 None:intergenic
AAGGTGAGGTAGGTGAATCG+GGG 0.624645 8_1:+81483877 None:intergenic
GAGTGATCAGACATAACCCT+AGG 0.624705 8_1:-81478937 Msa1218820:three_prime_UTR
TGTTCAATATTGACAGTGAA+CGG 0.624894 8_1:+81481950 None:intergenic
CCTCCGTCATGGAGAAGCTG+AGG 0.625957 8_1:+81483430 None:intergenic
CAGACAGCATGTCATACAAG+AGG 0.626182 8_1:-81479663 Msa1218820:CDS
CTTCCTCAGCTTCTCCATGA+CGG 0.627552 8_1:-81483433 Msa1218820:CDS
GTGAGTGTGAGGAAGTTGAT+CGG 0.633005 8_1:+81483839 None:intergenic
GTCAACCCAAAGAATGAACA+TGG 0.633377 8_1:-81482587 Msa1218820:CDS
AAACCCTTTCTCCAATTCGG+GGG 0.636685 8_1:+81481264 None:intergenic
TCGGTGTTAAAACCGGCGGA+AGG 0.636744 8_1:+81483858 None:intergenic
AAGGTCACAAAGACACTCAA+GGG 0.639389 8_1:-81482869 Msa1218820:CDS
GTAGCCTGTGAGTATGTGAT+GGG 0.639831 8_1:-81478555 Msa1218820:three_prime_UTR
AGGGAATGGACCCTTGAGGG+GGG 0.639868 8_1:-81480805 Msa1218820:CDS
ATGCACTCTACGTTCACCTA+GGG 0.640354 8_1:+81478921 None:intergenic
CGAGTGACGATGATCTTGAT+GGG 0.641532 8_1:-81482909 Msa1218820:CDS
CCCAACCGATTCGAACTGAT+CGG 0.645751 8_1:+81483567 None:intergenic
GCGGATGATATCGGGATCAA+CGG 0.645795 8_1:+81483785 None:intergenic
CAAACCCTTTCTCCAATTCG+GGG 0.646236 8_1:+81481263 None:intergenic
AATATGCTGCTGTTGAAGAA+GGG 0.649591 8_1:+81479100 None:intergenic
AATACAATGATTCGAATTGG+GGG 0.654718 8_1:-81482121 Msa1218820:CDS
TGTATACGCAGAACTGCGGA+AGG 0.656499 8_1:-81479868 Msa1218820:CDS
ATAATTAGCCTCAACAACAG+TGG 0.656678 8_1:+81481367 None:intergenic
AATTGGTTGCTGTTGAACAA+GGG 0.657542 8_1:+81478995 None:intergenic
CACAAGGGAATGGACCCTTG+AGG 0.658865 8_1:-81480809 Msa1218820:CDS
CCGCGACGAACCAGATCCAG+AGG 0.659004 8_1:-81483766 Msa1218820:CDS
CAAGGGAATGGACCCTTGAG+GGG 0.660264 8_1:-81480807 Msa1218820:CDS
TGGCATGCCAACTGACCCAG+AGG 0.667836 8_1:-81480081 Msa1218820:intron
TGTATACACCACTGGCAAAG+GGG 0.670745 8_1:-81480875 Msa1218820:CDS
CACATGTATACGCAGAACTG+CGG 0.673650 8_1:-81479872 Msa1218820:CDS
TGTTGAACAGTGATTATCAG+AGG 0.677031 8_1:-81483600 Msa1218820:intron
TTTGTATTGGATGAAGAACG+AGG 0.680156 8_1:-81478959 Msa1218820:three_prime_UTR
GCCCTTGTTCTAGCTGACAG+AGG 0.681239 8_1:-81480781 Msa1218820:CDS
TTTGAATTGGATAAAGAACG+AGG 0.681398 8_1:-81479064 Msa1218820:CDS
ATTGAACTTGATACTCGTGA+TGG 0.682549 8_1:-81483478 Msa1218820:CDS
CTGCCAATCCAATTGGAGGG+AGG 0.686702 8_1:-81480529 Msa1218820:intron
TCAACAACAGTGGAAAACAC+CGG 0.688586 8_1:+81481377 None:intergenic
GTCACAAAGACACTCAAGGG+AGG 0.689454 8_1:-81482866 Msa1218820:CDS
CAACAGGTTAAGTATGACTG+TGG 0.692160 8_1:-81482061 Msa1218820:CDS
CCACAAAGATCCAGTCACAA+GGG 0.693381 8_1:-81480824 Msa1218820:CDS
CAATGTGCCTTACAGCGATG+GGG 0.701292 8_1:+81479729 None:intergenic
TTCAAGTCACAACCTAAGGG+TGG 0.701623 8_1:-81480140 Msa1218820:CDS
AGGTGAGGTAGGTGAATCGG+GGG 0.705990 8_1:+81483878 None:intergenic
CTTCATCGTCTTCAGATGCG+CGG 0.707204 8_1:+81483811 None:intergenic
ACATTACCTTCACAACGCAG+AGG 0.708664 8_1:+81480289 None:intergenic
GAAGGGAAGCATAGACTACG+AGG 0.719952 8_1:-81481072 Msa1218820:CDS
CCTCAGCTTCTCCATGACGG+AGG 0.720807 8_1:-81483430 Msa1218820:intron
TTGATCGGTGTTAAAACCGG+CGG 0.721341 8_1:+81483854 None:intergenic
CATACTGGCCCCAAACCCAG+TGG 0.727107 8_1:+81478794 None:intergenic
GTATGACTGTGGCAAATGTG+GGG 0.732262 8_1:-81482050 Msa1218820:CDS
CCTCTGGATCTGGTTCGTCG+CGG 0.735594 8_1:+81483766 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGAATTGATACTAATTTT+GGG - chr8_1:81479295-81479314 Msa1218820:CDS 15.0%
!!! CTATCTTGTTATTTTATTTA+CGG - chr8_1:81479761-81479780 Msa1218820:intron 15.0%
!!! TATCTTGTTATTTTATTTAC+GGG - chr8_1:81479762-81479781 Msa1218820:intron 15.0%
!! AACAATAATCAATATGAATT+GGG + chr8_1:81480664-81480683 None:intergenic 15.0%
!! ATATTCTGATAAAAAAATTC+AGG - chr8_1:81481053-81481072 Msa1218820:CDS 15.0%
!! ATCAACAACAAATAATTAAA+TGG + chr8_1:81481306-81481325 None:intergenic 15.0%
!!! ATTTAATTATTTGTTGTTGA+TGG - chr8_1:81481305-81481324 Msa1218820:CDS 15.0%
!!! AGTCTTCTTTTAATTTTTAA+TGG - chr8_1:81481546-81481565 Msa1218820:intron 15.0%
!!! TTACAAATTACTTTTTCTTT+TGG - chr8_1:81483010-81483029 Msa1218820:intron 15.0%
!!! GATTCAAAAACTTTTTAAAT+TGG + chr8_1:81483777-81483796 None:intergenic 15.0%
!! GAAAAAAAAAAGAGAAATAG+AGG + chr8_1:81478822-81478841 None:intergenic 20.0%
!!! GAATGAATTGATACTAATTT+TGG - chr8_1:81479294-81479313 Msa1218820:CDS 20.0%
!!! ATGAATTGATACTAATTTTG+GGG - chr8_1:81479296-81479315 Msa1218820:CDS 20.0%
!!! GTATTGTAATTTGTTAATGA+CGG - chr8_1:81479328-81479347 Msa1218820:CDS 20.0%
!!! ATTGTTTTTTAGAATGAACA+TGG - chr8_1:81479359-81479378 Msa1218820:CDS 20.0%
!! GAAATACTTAGATTTATTGT+TGG - chr8_1:81479445-81479464 Msa1218820:intron 20.0%
!!! TTTATTGTTGGTTTAGTTTT+TGG - chr8_1:81479457-81479476 Msa1218820:intron 20.0%
!! ACTTATAAAGTATAAGATGT+TGG - chr8_1:81479489-81479508 Msa1218820:intron 20.0%
!!! ATCTTGTTATTTTATTTACG+GGG - chr8_1:81479763-81479782 Msa1218820:intron 20.0%
!!! GAATAAGAATTCTGAAAAAA+TGG + chr8_1:81480499-81480518 None:intergenic 20.0%
!!! TAACTTATTTTGCAAAACTT+TGG + chr8_1:81480620-81480639 None:intergenic 20.0%
!!! TTTTGCAAAATAAGTTAAGA+AGG - chr8_1:81480623-81480642 Msa1218820:CDS 20.0%
!! GAACAATAATCAATATGAAT+TGG + chr8_1:81480665-81480684 None:intergenic 20.0%
!!! AACGAATTATAGAACTTTTT+TGG - chr8_1:81480750-81480769 Msa1218820:CDS 20.0%
!! AAGAAGACTATAAATAACAA+AGG + chr8_1:81481535-81481554 None:intergenic 20.0%
!! CACTAAGATAAATATTATCA+GGG - chr8_1:81481867-81481886 Msa1218820:intron 20.0%
!!! AACTACTGATTACTAATATA+TGG - chr8_1:81482081-81482100 Msa1218820:CDS 20.0%
!!! ATTACTATAGTGATTTTGAT+TGG - chr8_1:81483060-81483079 Msa1218820:intron 20.0%
!! TTCTTTATCCAATTCAAAAT+TGG + chr8_1:81483446-81483465 None:intergenic 20.0%
!!! TTAAAAAGTTTTTGAATCGT+TGG - chr8_1:81483779-81483798 Msa1218820:CDS 20.0%
! GAAATGAAATGAAAGAGAAA+TGG + chr8_1:81479112-81479131 None:intergenic 25.0%
! ATGCTTAGTTACTACTATTT+AGG - chr8_1:81479164-81479183 Msa1218820:intron 25.0%
! TGCTTAGTTACTACTATTTA+GGG - chr8_1:81479165-81479184 Msa1218820:intron 25.0%
!!! TTGCAAATGCTATGTTTTTT+AGG - chr8_1:81479232-81479251 Msa1218820:CDS 25.0%
!!! TTTTAGAATGAACATGGATT+AGG - chr8_1:81479365-81479384 Msa1218820:CDS 25.0%
!!! TGCTTATTTTATGCGAATTA+GGG - chr8_1:81479421-81479440 Msa1218820:intron 25.0%
! AAAAGACACAATAAATTAGC+TGG + chr8_1:81480048-81480067 None:intergenic 25.0%
!!! ATTACTTCTAAAACAGAATG+AGG + chr8_1:81480158-81480177 None:intergenic 25.0%
!!! TCATTCTGTTTTAGAAGTAA+TGG - chr8_1:81480157-81480176 Msa1218820:CDS 25.0%
! TTCGAATCATTGTATTCAAA+TGG + chr8_1:81480387-81480406 None:intergenic 25.0%
! TTGAATACAATGATTCGAAT+TGG - chr8_1:81480388-81480407 Msa1218820:intron 25.0%
! TGAATACAATGATTCGAATT+GGG - chr8_1:81480389-81480408 Msa1218820:intron 25.0%
!! TTTTCAGAATTCTTATTCAG+AGG - chr8_1:81480501-81480520 Msa1218820:intron 25.0%
! CTATACTATAGACAATTTAC+AGG - chr8_1:81480838-81480857 Msa1218820:CDS 25.0%
! ATATAAACAAGTCAAAGTAG+AGG + chr8_1:81480994-81481013 None:intergenic 25.0%
!!! CTACTTTGACTTGTTTATAT+TGG - chr8_1:81480994-81481013 Msa1218820:intron 25.0%
! TTCTGATAAAAAAATTCAGG+AGG - chr8_1:81481056-81481075 Msa1218820:CDS 25.0%
! AAAGAGGAGATTGAAAATTT+GGG - chr8_1:81481219-81481238 Msa1218820:intron 25.0%
! AAATACAACTAGAAGTTCTA+AGG + chr8_1:81481277-81481296 None:intergenic 25.0%
! CCTGATAATATTTATCTTAG+TGG + chr8_1:81481869-81481888 None:intergenic 25.0%
! CCACTAAGATAAATATTATC+AGG - chr8_1:81481866-81481885 Msa1218820:intron 25.0%
!!! GGTTTAGTTTCAATTTTATG+AGG - chr8_1:81482102-81482121 Msa1218820:CDS 25.0%
! ATATCGAAACGAGAAATAAT+AGG + chr8_1:81482203-81482222 None:intergenic 25.0%
! TTACCTTAAATTGATGTTAC+TGG + chr8_1:81482480-81482499 None:intergenic 25.0%
! CTTGTGGTTATTATTTGTAA+GGG - chr8_1:81482711-81482730 Msa1218820:CDS 25.0%
! AAATCACTATAGTAATGTGA+TGG + chr8_1:81483056-81483075 None:intergenic 25.0%
! ATCTACTTTGATATCTACAT+GGG + chr8_1:81483269-81483288 None:intergenic 25.0%
! CAGTTAGAAAACAAACATAA+AGG + chr8_1:81483322-81483341 None:intergenic 25.0%
!!! TTATGTTTGTTTTCTAACTG+AGG - chr8_1:81483322-81483341 Msa1218820:intron 25.0%
!! TTCAAATGCCAATTTTGAAT+TGG - chr8_1:81483435-81483454 Msa1218820:CDS 25.0%
!!! TGCATCTATGGATTTATTTT+TGG - chr8_1:81483609-81483628 Msa1218820:intron 25.0%
! CAATCAGACTAATATAGAAT+AGG + chr8_1:81483636-81483655 None:intergenic 25.0%
!! CTATTCTATATTAGTCTGAT+TGG - chr8_1:81483634-81483653 Msa1218820:intron 25.0%
! AGCAAATACATAACATTCAA+AGG + chr8_1:81483661-81483680 None:intergenic 25.0%
! TAAGAGAAATCTCTTGATAT+TGG + chr8_1:81483816-81483835 None:intergenic 25.0%
! TTTCATCATATCTACATCTT+TGG - chr8_1:81483900-81483919 Msa1218820:CDS 25.0%
! GTTACTACTATTTAGGGTTT+AGG - chr8_1:81479171-81479190 Msa1218820:intron 30.0%
!! GATACTAATTTTGGGGAAAT+TGG - chr8_1:81479303-81479322 Msa1218820:CDS 30.0%
!!! GTGCTTATTTTATGCGAATT+AGG - chr8_1:81479420-81479439 Msa1218820:intron 30.0%
TGAACTTTGTATTGCAGATA+CGG - chr8_1:81479523-81479542 Msa1218820:intron 30.0%
AAATGAGGATGATCAATATG+AGG - chr8_1:81479688-81479707 Msa1218820:CDS 30.0%
TAAGAAATCCTTGAATTTCC+TGG + chr8_1:81479896-81479915 None:intergenic 30.0%
!!! ACTATTAGTTTTTCATCCAG+TGG + chr8_1:81480341-81480360 None:intergenic 30.0%
GAATACAATGATTCGAATTG+GGG - chr8_1:81480390-81480409 Msa1218820:intron 30.0%
AATACAATGATTCGAATTGG+GGG - chr8_1:81480391-81480410 Msa1218820:intron 30.0%
TGTTCAATATTGACAGTGAA+CGG + chr8_1:81480565-81480584 None:intergenic 30.0%
TGCAAAATAAGTTAAGAAGG+AGG - chr8_1:81480626-81480645 Msa1218820:CDS 30.0%
TTATTGTTCTTCACTTTGAC+TGG - chr8_1:81480676-81480695 Msa1218820:intron 30.0%
TATTGTTCTTCACTTTGACT+GGG - chr8_1:81480677-81480696 Msa1218820:intron 30.0%
TGCTACAGTACATCTAAATT+TGG + chr8_1:81480725-81480744 None:intergenic 30.0%
AAAACCATTCTTTGTGTTCA+GGG + chr8_1:81481115-81481134 None:intergenic 30.0%
CAAAGAGGAGATTGAAAATT+TGG - chr8_1:81481218-81481237 Msa1218820:intron 30.0%
GTCAAGAAAAGAATGTTGAA+GGG - chr8_1:81481423-81481442 Msa1218820:CDS 30.0%
GACATAAATGTTCTTCTTCT+CGG - chr8_1:81481464-81481483 Msa1218820:intron 30.0%
GTCAGATATGTTGAAAAAAC+TGG - chr8_1:81481605-81481624 Msa1218820:CDS 30.0%
! GATTGAGTTCTTGATTTTAC+AGG - chr8_1:81482293-81482312 Msa1218820:CDS 30.0%
! TCTGTGACTCAAAACATTTT+TGG - chr8_1:81482515-81482534 Msa1218820:intron 30.0%
TTCGTTAAGTAAAAAGAGAC+AGG + chr8_1:81482685-81482704 None:intergenic 30.0%
! ACTTAACGAAATTTTGCTTG+TGG - chr8_1:81482695-81482714 Msa1218820:CDS 30.0%
GCTTGTGGTTATTATTTGTA+AGG - chr8_1:81482710-81482729 Msa1218820:CDS 30.0%
! TCTTATTCTCTTGTTTAGCA+CGG - chr8_1:81482751-81482770 Msa1218820:intron 30.0%
TTCATTTCTACCCAAAAGTT+TGG - chr8_1:81482907-81482926 Msa1218820:CDS 30.0%
TCATTTCTACCCAAAAGTTT+GGG - chr8_1:81482908-81482927 Msa1218820:CDS 30.0%
CAAATGCTCTTCCTAAAATA+CGG - chr8_1:81483105-81483124 Msa1218820:intron 30.0%
! CAATATCAAGACCGTATTTT+AGG + chr8_1:81483119-81483138 None:intergenic 30.0%
CATCTACTTTGATATCTACA+TGG + chr8_1:81483270-81483289 None:intergenic 30.0%
ACTAGTGTTAATTACCTTGA+AGG + chr8_1:81483299-81483318 None:intergenic 30.0%
TTTGAATTGGATAAAGAACG+AGG - chr8_1:81483448-81483467 Msa1218820:CDS 30.0%
TTATCAGACATTATCTCACT+AGG - chr8_1:81483473-81483492 Msa1218820:CDS 30.0%
CAAAACTGGCATTTGAAAAT+TGG + chr8_1:81483537-81483556 None:intergenic 30.0%
!! TTCAAATGCCAGTTTTGTAT+TGG - chr8_1:81483540-81483559 Msa1218820:CDS 30.0%
TTCTTCATCCAATACAAAAC+TGG + chr8_1:81483551-81483570 None:intergenic 30.0%
!!! TATTTTAACCTAATAGCCAC+TGG - chr8_1:81483702-81483721 Msa1218820:intron 30.0%
!! ATTTTAACCTAATAGCCACT+GGG - chr8_1:81483703-81483722 Msa1218820:intron 30.0%
AAGAGTGGAATAGATGTAAT+TGG - chr8_1:81483856-81483875 Msa1218820:CDS 30.0%
!! AAGTTGATCGGTGTTAAAAC+CGG + chr8_1:81478664-81478683 None:intergenic 35.0%
TGTTGAACAGTGATTATCAG+AGG - chr8_1:81478912-81478931 Msa1218820:three_prime_UTR 35.0%
AACAGTGATTATCAGAGGAT+GGG - chr8_1:81478917-81478936 Msa1218820:three_prime_UTR 35.0%
!! GAGAGATTTTGATCAGATCA+TGG - chr8_1:81478991-81479010 Msa1218820:three_prime_UTR 35.0%
!! AGATTTTGATCAGATCATGG+AGG - chr8_1:81478994-81479013 Msa1218820:three_prime_UTR 35.0%
ATTGAACTTGATACTCGTGA+TGG - chr8_1:81479034-81479053 Msa1218820:exon 35.0%
!!! TTTTTTAGGCAACTTCACTC+TGG - chr8_1:81479246-81479265 Msa1218820:CDS 35.0%
TCCAACTACTGATCAAAATG+AGG - chr8_1:81479673-81479692 Msa1218820:CDS 35.0%
!! TCCTCATTTTGATCAGTAGT+TGG + chr8_1:81479677-81479696 None:intergenic 35.0%
!!! AGGATTTTGATGATGAAGCT+GGG - chr8_1:81479800-81479819 Msa1218820:intron 35.0%
TTCAAGGAACTCTTAGAGAA+TGG - chr8_1:81479839-81479858 Msa1218820:intron 35.0%
TCAAGGAACTCTTAGAGAAT+GGG - chr8_1:81479840-81479859 Msa1218820:intron 35.0%
TGAATTTCCTGGCTATGAAA+CGG + chr8_1:81479885-81479904 None:intergenic 35.0%
TTTCATAGCCAGGAAATTCA+AGG - chr8_1:81479885-81479904 Msa1218820:CDS 35.0%
AGTCTCCATGTTCATTCTTT+GGG + chr8_1:81479933-81479952 None:intergenic 35.0%
AAGTCTCCATGTTCATTCTT+TGG + chr8_1:81479934-81479953 None:intergenic 35.0%
TTTCGAATCTGGTCATAAAC+TGG + chr8_1:81480269-81480288 None:intergenic 35.0%
ATGACCAGATTCGAAATATC+AGG - chr8_1:81480273-81480292 Msa1218820:intron 35.0%
GTTACCTGATATTTCGAATC+TGG + chr8_1:81480280-81480299 None:intergenic 35.0%
! TGGGAGTGTAATATATCAGT+TGG + chr8_1:81480312-81480331 None:intergenic 35.0%
TTTCATCCAGTGGAAGATAT+GGG + chr8_1:81480331-81480350 None:intergenic 35.0%
! TTTTCATCCAGTGGAAGATA+TGG + chr8_1:81480332-81480351 None:intergenic 35.0%
ATACTTAACCTGTTGCAACT+GGG + chr8_1:81480446-81480465 None:intergenic 35.0%
TCTTATTCAGAGGTGAAAGT+TGG - chr8_1:81480511-81480530 Msa1218820:intron 35.0%
GTTCACTGTCAATATTGAAC+AGG - chr8_1:81480564-81480583 Msa1218820:CDS 35.0%
GTACTTCCTTTCAAATCCTT+GGG - chr8_1:81480586-81480605 Msa1218820:CDS 35.0%
TGAAATCCCAAGGATTTGAA+AGG + chr8_1:81480595-81480614 None:intergenic 35.0%
!! AACTTTGGTTTGAAATCCCA+AGG + chr8_1:81480605-81480624 None:intergenic 35.0%
AGTATCACTTCCTTGTATCT+CGG + chr8_1:81480921-81480940 None:intergenic 35.0%
AAATCATTACAGAACACCCA+CGG + chr8_1:81481020-81481039 None:intergenic 35.0%
AAAAAAATTCAGGAGGTCAC+AGG - chr8_1:81481063-81481082 Msa1218820:CDS 35.0%
GAAAACCATTCTTTGTGTTC+AGG + chr8_1:81481116-81481135 None:intergenic 35.0%
! GAACACAAAGAATGGTTTTC+CGG - chr8_1:81481116-81481135 Msa1218820:CDS 35.0%
! ATAATTAGCCTCAACAACAG+TGG + chr8_1:81481148-81481167 None:intergenic 35.0%
AACAAACCCTTTCTCCAATT+CGG + chr8_1:81481254-81481273 None:intergenic 35.0%
GGTCAAGAAAAGAATGTTGA+AGG - chr8_1:81481422-81481441 Msa1218820:CDS 35.0%
ATTTGACAAGATGAATGACC+AGG - chr8_1:81481772-81481791 Msa1218820:intron 35.0%
AGCATAAGCATATCAAAAGC+TGG - chr8_1:81481919-81481938 Msa1218820:intron 35.0%
TAGAAGATGAAGTCTTGGTT+TGG + chr8_1:81482043-81482062 None:intergenic 35.0%
TGACATAGAAGATGAAGTCT+TGG + chr8_1:81482048-81482067 None:intergenic 35.0%
GGTTTCTAATTGAACTCTGT+TGG - chr8_1:81482123-81482142 Msa1218820:CDS 35.0%
CTGCCAGTAACATCAATTTA+AGG - chr8_1:81482474-81482493 Msa1218820:intron 35.0%
TACTTCTTCAACAGATCTTG+AGG + chr8_1:81482558-81482577 None:intergenic 35.0%
AATCAGCATCATGTAACCTT+GGG + chr8_1:81482608-81482627 None:intergenic 35.0%
AAATCAGCATCATGTAACCT+TGG + chr8_1:81482609-81482628 None:intergenic 35.0%
GGCACATTGAATCAATGATA+AGG - chr8_1:81482797-81482816 Msa1218820:intron 35.0%
CATTTCTACCCAAAAGTTTG+GGG - chr8_1:81482909-81482928 Msa1218820:CDS 35.0%
!!! GTGATTTTGATTGGCATTCA+TGG - chr8_1:81483069-81483088 Msa1218820:intron 35.0%
ATGCTCATTTATATTCTCCG+TGG - chr8_1:81483184-81483203 Msa1218820:intron 35.0%
TGCTCATTTATATTCTCCGT+GGG - chr8_1:81483185-81483204 Msa1218820:intron 35.0%
AATATGCTGCTGTTGAAGAA+GGG + chr8_1:81483415-81483434 None:intergenic 35.0%
AAATATGCTGCTGTTGAAGA+AGG + chr8_1:81483416-81483435 None:intergenic 35.0%
! AATTGGTTGCTGTTGAACAA+GGG + chr8_1:81483520-81483539 None:intergenic 35.0%
! AAATTGGTTGCTGTTGAACA+AGG + chr8_1:81483521-81483540 None:intergenic 35.0%
TTTGTATTGGATGAAGAACG+AGG - chr8_1:81483553-81483572 Msa1218820:CDS 35.0%
GAGCTAGAAGAGAAGAATCA+TGG - chr8_1:81478590-81478609 Msa1218820:three_prime_UTR 40.0%
GAACAGTGATTATCAGAGGA+TGG - chr8_1:81478916-81478935 Msa1218820:three_prime_UTR 40.0%
GGATATATCACAATTCGCTC+TGG - chr8_1:81479386-81479405 Msa1218820:intron 40.0%
ATACGGATGATGACAGTTAC+AGG - chr8_1:81479540-81479559 Msa1218820:intron 40.0%
AAGGTCACAAAGACACTCAA+GGG - chr8_1:81479643-81479662 Msa1218820:CDS 40.0%
TTTACGGGGTCATTGAATGT+AGG - chr8_1:81479777-81479796 Msa1218820:intron 40.0%
!!! GAGGATTTTGATGATGAAGC+TGG - chr8_1:81479799-81479818 Msa1218820:intron 40.0%
TATGAGATGTACCGTGTTCA+AGG - chr8_1:81479823-81479842 Msa1218820:intron 40.0%
! CTCTAAGAGTTCCTTGAACA+CGG + chr8_1:81479837-81479856 None:intergenic 40.0%
GTCAACCCAAAGAATGAACA+TGG - chr8_1:81479925-81479944 Msa1218820:CDS 40.0%
TGTGCGTCTGATAAGTGAAA+TGG - chr8_1:81479960-81479979 Msa1218820:CDS 40.0%
CTGATAAGTGAAATGGTGTC+AGG - chr8_1:81479967-81479986 Msa1218820:intron 40.0%
TGTAGCTAACAAGTGCAGTT+TGG - chr8_1:81480070-81480089 Msa1218820:intron 40.0%
CTGGTCATAAACTGGTAAGT+TGG + chr8_1:81480261-81480280 None:intergenic 40.0%
ATAGTTGCCTTATATCGAGC+AGG - chr8_1:81480356-81480375 Msa1218820:CDS 40.0%
TACTTAACCTGTTGCAACTG+GGG + chr8_1:81480445-81480464 None:intergenic 40.0%
CATACTTAACCTGTTGCAAC+TGG + chr8_1:81480447-81480466 None:intergenic 40.0%
CAACAGGTTAAGTATGACTG+TGG - chr8_1:81480451-81480470 Msa1218820:intron 40.0%
AAGTATGACTGTGGCAAATG+TGG - chr8_1:81480460-81480479 Msa1218820:intron 40.0%
AGTATGACTGTGGCAAATGT+GGG - chr8_1:81480461-81480480 Msa1218820:intron 40.0%
!! TTTTGATTGACACTCAGGAC+AGG + chr8_1:81480539-81480558 None:intergenic 40.0%
TGTCCTGAGTGTCAATCAAA+AGG - chr8_1:81480538-81480557 Msa1218820:CDS 40.0%
GGTACTTCCTTTCAAATCCT+TGG - chr8_1:81480585-81480604 Msa1218820:CDS 40.0%
GATCTTACAATCTCTTCTCC+AGG + chr8_1:81480972-81480991 None:intergenic 40.0%
!! TGACTTGTTTATATTGGCCG+TGG - chr8_1:81481000-81481019 Msa1218820:intron 40.0%
! GACTTGTTTATATTGGCCGT+GGG - chr8_1:81481001-81481020 Msa1218820:intron 40.0%
TTGTCCCTGAACACAAAGAA+TGG - chr8_1:81481108-81481127 Msa1218820:CDS 40.0%
TCAACAACAGTGGAAAACAC+CGG + chr8_1:81481138-81481157 None:intergenic 40.0%
TAAGTTTGTAGGCAGAGAAG+AGG + chr8_1:81481188-81481207 None:intergenic 40.0%
GTCTTCCTGTGTAAGTTTGT+AGG + chr8_1:81481199-81481218 None:intergenic 40.0%
ACTTACACAGGAAGACAAAG+AGG - chr8_1:81481203-81481222 Msa1218820:intron 40.0%
ACAAACCCTTTCTCCAATTC+GGG + chr8_1:81481253-81481272 None:intergenic 40.0%
TCCATTGCTCCATCAATCTA+TGG - chr8_1:81481356-81481375 Msa1218820:CDS 40.0%
ACCATAGATTGATGGAGCAA+TGG + chr8_1:81481360-81481379 None:intergenic 40.0%
TCATCGTGACCATAGATTGA+TGG + chr8_1:81481368-81481387 None:intergenic 40.0%
! GCAATAGCCTTAGCTATGTT+TGG - chr8_1:81481398-81481417 Msa1218820:CDS 40.0%
! ATAGCCTTAGCTATGTTTGG+AGG - chr8_1:81481401-81481420 Msa1218820:CDS 40.0%
TTGACCTCCAAACATAGCTA+AGG + chr8_1:81481408-81481427 None:intergenic 40.0%
!! AATTGAGACTTTGCTGTTCC+TGG + chr8_1:81481494-81481513 None:intergenic 40.0%
ACAAGATGAATGACCAGGAT+CGG - chr8_1:81481777-81481796 Msa1218820:intron 40.0%
! ATCTATTTTCCTACCGATCC+TGG + chr8_1:81481793-81481812 None:intergenic 40.0%
TGGAATTGTCACATCTCTTC+AGG - chr8_1:81481939-81481958 Msa1218820:intron 40.0%
TCACTTCAAGTCACAACCTA+AGG - chr8_1:81482368-81482387 Msa1218820:CDS 40.0%
CACTTCAAGTCACAACCTAA+GGG - chr8_1:81482369-81482388 Msa1218820:CDS 40.0%
CCTTGGGAAAACATTCAACT+TGG + chr8_1:81482592-81482611 None:intergenic 40.0%
!! CCAAGTTGAATGTTTTCCCA+AGG - chr8_1:81482589-81482608 Msa1218820:CDS 40.0%
! TTTCTGCACCCCAAACTTTT+GGG + chr8_1:81482920-81482939 None:intergenic 40.0%
!! AGAAAGCACTGCAAAAGGTA+TGG - chr8_1:81482935-81482954 Msa1218820:CDS 40.0%
GGCATTCATGGAATTTGTAC+TGG - chr8_1:81483081-81483100 Msa1218820:intron 40.0%
CGTAACCAATGCTTTGCATT+TGG - chr8_1:81483210-81483229 Msa1218820:intron 40.0%
GTCTTCCAAATGCAAAGCAT+TGG + chr8_1:81483218-81483237 None:intergenic 40.0%
CATTTGGAAGACATTCTCAC+TGG - chr8_1:81483226-81483245 Msa1218820:intron 40.0%
AGTAGATGATCTCTCCTTCA+AGG - chr8_1:81483282-81483301 Msa1218820:intron 40.0%
! ATTGGTTGCTGTTGAACAAG+GGG + chr8_1:81483519-81483538 None:intergenic 40.0%
ACAGAACAGTCAAGAAAGAG+TGG - chr8_1:81483841-81483860 Msa1218820:CDS 40.0%
CATTGCATCTATGAGCGTTA+AGG + chr8_1:81483930-81483949 None:intergenic 40.0%
!! TTGATCGGTGTTAAAACCGG+CGG + chr8_1:81478661-81478680 None:intergenic 45.0%
! GTGAGTGTGAGGAAGTTGAT+CGG + chr8_1:81478676-81478695 None:intergenic 45.0%
TGAAGCCGATCAGTTCGAAT+CGG - chr8_1:81478940-81478959 Msa1218820:three_prime_UTR 45.0%
!! ATCGGTTGGGTTGGATGATT+CGG - chr8_1:81478958-81478977 Msa1218820:three_prime_UTR 45.0%
! CTGAGGAAGTTTAGAGCGAT+TGG + chr8_1:81479068-81479087 None:intergenic 45.0%
GAAATGGTTTACCTCCGTCA+TGG + chr8_1:81479096-81479115 None:intergenic 45.0%
ACAGTTACAGGCCCTCTAAA+AGG - chr8_1:81479552-81479571 Msa1218820:intron 45.0%
! CAGTTACAGGCCCTCTAAAA+GGG - chr8_1:81479553-81479572 Msa1218820:intron 45.0%
CCATCAAGATCATCGTCACT+CGG + chr8_1:81479605-81479624 None:intergenic 45.0%
CGAGTGACGATGATCTTGAT+GGG - chr8_1:81479603-81479622 Msa1218820:CDS 45.0%
GATGGGATGAATAGTTCACC+TGG - chr8_1:81479620-81479639 Msa1218820:CDS 45.0%
GGATGAATAGTTCACCTGGA+AGG - chr8_1:81479624-81479643 Msa1218820:CDS 45.0%
GAAGGTCACAAAGACACTCA+AGG - chr8_1:81479642-81479661 Msa1218820:CDS 45.0%
TCCATCCCAACATTGCCATT+TGG - chr8_1:81480120-81480139 Msa1218820:CDS 45.0%
GCTAGCCAAATGGCAATGTT+GGG + chr8_1:81480128-81480147 None:intergenic 45.0%
AGCTAGCCAAATGGCAATGT+TGG + chr8_1:81480129-81480148 None:intergenic 45.0%
TACACTCCCATATCTTCCAC+TGG - chr8_1:81480322-81480341 Msa1218820:CDS 45.0%
ACTTAACCTGTTGCAACTGG+GGG + chr8_1:81480444-81480463 None:intergenic 45.0%
GTATGACTGTGGCAAATGTG+GGG - chr8_1:81480462-81480481 Msa1218820:intron 45.0%
!! GGTCCTTTTGATTGACACTC+AGG + chr8_1:81480544-81480563 None:intergenic 45.0%
! GGTGTTTTCCACTGTTGTTG+AGG - chr8_1:81481137-81481156 Msa1218820:CDS 45.0%
CTCTGCCTACAAACTTACAC+AGG - chr8_1:81481191-81481210 Msa1218820:intron 45.0%
AAACCCTTTCTCCAATTCGG+GGG + chr8_1:81481251-81481270 None:intergenic 45.0%
CAAACCCTTTCTCCAATTCG+GGG + chr8_1:81481252-81481271 None:intergenic 45.0%
CTGTATACACCACTGGCAAA+GGG - chr8_1:81481636-81481655 Msa1218820:CDS 45.0%
TGTATACACCACTGGCAAAG+GGG - chr8_1:81481637-81481656 Msa1218820:CDS 45.0%
TCCACAAAGATCCAGTCACA+AGG - chr8_1:81481687-81481706 Msa1218820:intron 45.0%
CCACAAAGATCCAGTCACAA+GGG - chr8_1:81481688-81481707 Msa1218820:intron 45.0%
AAGATCCAGTCACAAGGGAA+TGG - chr8_1:81481693-81481712 Msa1218820:intron 45.0%
TCCTCTGTCAGCTAGAACAA+GGG + chr8_1:81481735-81481754 None:intergenic 45.0%
TTCCTCTGTCAGCTAGAACA+AGG + chr8_1:81481736-81481755 None:intergenic 45.0%
GGTAAGTATCCATGAAGCCA+TGG - chr8_1:81481888-81481907 Msa1218820:intron 45.0%
ATTGCTGCTGCCAATCCAAT+TGG - chr8_1:81481976-81481995 Msa1218820:CDS 45.0%
TTACCTCCCTCCAATTGGAT+TGG + chr8_1:81481989-81482008 None:intergenic 45.0%
TTTGCTTACCTCCCTCCAAT+TGG + chr8_1:81481994-81482013 None:intergenic 45.0%
GGGAGGTAAGCAAATATGCA+AGG - chr8_1:81482000-81482019 Msa1218820:CDS 45.0%
ACATTACCTTCACAACGCAG+AGG + chr8_1:81482226-81482245 None:intergenic 45.0%
GCAAGCATTTCATCAGTGAC+TGG + chr8_1:81482330-81482349 None:intergenic 45.0%
TTCAAGTCACAACCTAAGGG+TGG - chr8_1:81482372-81482391 Msa1218820:CDS 45.0%
GAGTCATTGTTACCACCCTT+AGG + chr8_1:81482387-81482406 None:intergenic 45.0%
GGAATTTAGTGAGGACCTCT+GGG + chr8_1:81482449-81482468 None:intergenic 45.0%
AGGAATTTAGTGAGGACCTC+TGG + chr8_1:81482450-81482469 None:intergenic 45.0%
CACATGTATACGCAGAACTG+CGG - chr8_1:81482640-81482659 Msa1218820:CDS 45.0%
! TCTCTTGTTTAGCACGGACA+AGG - chr8_1:81482757-81482776 Msa1218820:intron 45.0%
TCAATGTGCCTTACAGCGAT+GGG + chr8_1:81482787-81482806 None:intergenic 45.0%
TTCAATGTGCCTTACAGCGA+TGG + chr8_1:81482788-81482807 None:intergenic 45.0%
CAGACAGCATGTCATACAAG+AGG - chr8_1:81482849-81482868 Msa1218820:CDS 45.0%
GCATGTCATACAAGAGGATG+TGG - chr8_1:81482855-81482874 Msa1218820:CDS 45.0%
CATACAAGAGGATGTGGACA+TGG - chr8_1:81482861-81482880 Msa1218820:CDS 45.0%
! CTTTCTGCACCCCAAACTTT+TGG + chr8_1:81482921-81482940 None:intergenic 45.0%
!!! GTCGTTTTGTTTGACACTGC+AGG - chr8_1:81483360-81483379 Msa1218820:intron 45.0%
GAGTGATCAGACATAACCCT+AGG - chr8_1:81483575-81483594 Msa1218820:CDS 45.0%
ATGCACTCTACGTTCACCTA+GGG + chr8_1:81483594-81483613 None:intergenic 45.0%
GTGAACGTAGAGTGCATCTA+TGG - chr8_1:81483597-81483616 Msa1218820:intron 45.0%
AACCTAATAGCCACTGGGTT+TGG - chr8_1:81483708-81483727 Msa1218820:intron 45.0%
ACCTAATAGCCACTGGGTTT+GGG - chr8_1:81483709-81483728 Msa1218820:intron 45.0%
GTAGCCTGTGAGTATGTGAT+GGG - chr8_1:81483957-81483976 Msa1218820:five_prime_UTR 45.0%
AGAACCCATCACATACTCAC+AGG + chr8_1:81483964-81483983 None:intergenic 45.0%
AAGGTGAGGTAGGTGAATCG+GGG + chr8_1:81478638-81478657 None:intergenic 50.0%
GAAGGTGAGGTAGGTGAATC+GGG + chr8_1:81478639-81478658 None:intergenic 50.0%
GGAAGGTGAGGTAGGTGAAT+CGG + chr8_1:81478640-81478659 None:intergenic 50.0%
CTTCATCGTCTTCAGATGCG+CGG + chr8_1:81478704-81478723 None:intergenic 50.0%
GCGGATGATATCGGGATCAA+CGG + chr8_1:81478730-81478749 None:intergenic 50.0%
TGGTTCGTCGCGGATGATAT+CGG + chr8_1:81478739-81478758 None:intergenic 50.0%
TCTTCCTCTTCCTCTGGATC+TGG + chr8_1:81478759-81478778 None:intergenic 50.0%
GATCCAGAGGAAGAGGAAGA+TGG - chr8_1:81478759-81478778 Msa1218820:three_prime_UTR 50.0%
TCTCCATCTTCCTCTTCCTC+TGG + chr8_1:81478765-81478784 None:intergenic 50.0%
!! CCCAACCGATTCGAACTGAT+CGG + chr8_1:81478948-81478967 None:intergenic 50.0%
CCGATCAGTTCGAATCGGTT+GGG - chr8_1:81478945-81478964 Msa1218820:three_prime_UTR 50.0%
TCAGTTCGAATCGGTTGGGT+TGG - chr8_1:81478949-81478968 Msa1218820:three_prime_UTR 50.0%
!! TGGGTTGGATGATTCGGTTG+AGG - chr8_1:81478964-81478983 Msa1218820:three_prime_UTR 50.0%
! GTTTAGAGCGATTGGAAGCG+CGG + chr8_1:81479060-81479079 None:intergenic 50.0%
CTTCCTCAGCTTCTCCATGA+CGG - chr8_1:81479079-81479098 Msa1218820:CDS 50.0%
!! TCAGCTCTGGCCCTTTTAGA+GGG + chr8_1:81479566-81479585 None:intergenic 50.0%
!! ATCAGCTCTGGCCCTTTTAG+AGG + chr8_1:81479567-81479586 None:intergenic 50.0%
AGAAGACCTGTGATCAGCTC+TGG + chr8_1:81479579-81479598 None:intergenic 50.0%
CCGAGTGACGATGATCTTGA+TGG - chr8_1:81479602-81479621 Msa1218820:CDS 50.0%
GAGTGTCTTTGTGACCTTCC+AGG + chr8_1:81479641-81479660 None:intergenic 50.0%
GTCACAAAGACACTCAAGGG+AGG - chr8_1:81479646-81479665 Msa1218820:CDS 50.0%
ACGGGGTCATTGAATGTAGG+AGG - chr8_1:81479780-81479799 Msa1218820:intron 50.0%
GCCAAATGGCAATGTTGGGA+TGG + chr8_1:81480124-81480143 None:intergenic 50.0%
AGGTGCATCAGCTAGCCAAA+TGG + chr8_1:81480138-81480157 None:intergenic 50.0%
GGATCTGCCTGCTCGATATA+AGG + chr8_1:81480366-81480385 None:intergenic 50.0%
GAATTGGGGGAGTTGTAACC+AGG - chr8_1:81480404-81480423 Msa1218820:intron 50.0%
! AGTTTTCCCCCAGTTGCAAC+AGG - chr8_1:81480435-81480454 Msa1218820:intron 50.0%
! TGGCAAATGTGGGGCAGTTT+TGG - chr8_1:81480471-81480490 Msa1218820:intron 50.0%
! GGCAAATGTGGGGCAGTTTT+GGG - chr8_1:81480472-81480491 Msa1218820:intron 50.0%
GTCCTGCAGGAACTATTCCA+GGG + chr8_1:81480893-81480912 None:intergenic 50.0%
AAGACCCCCGAATTGGAGAA+AGG - chr8_1:81481244-81481263 Msa1218820:intron 50.0%
AGACCCCCGAATTGGAGAAA+GGG - chr8_1:81481245-81481264 Msa1218820:intron 50.0%
! GAAGGGAAGCATAGACTACG+AGG - chr8_1:81481440-81481459 Msa1218820:CDS 50.0%
GTTCTTCTTCTCGGTGATCC+AGG - chr8_1:81481473-81481492 Msa1218820:intron 50.0%
CAGAGAGCTGTATACACCAC+TGG - chr8_1:81481629-81481648 Msa1218820:CDS 50.0%
GCTGTATACACCACTGGCAA+AGG - chr8_1:81481635-81481654 Msa1218820:CDS 50.0%
CCCTTGTGACTGGATCTTTG+TGG + chr8_1:81481691-81481710 None:intergenic 50.0%
ACAAGGGAATGGACCCTTGA+GGG - chr8_1:81481704-81481723 Msa1218820:intron 50.0%
GATGAATGACCAGGATCGGT+AGG - chr8_1:81481781-81481800 Msa1218820:intron 50.0%
CTGCTGCCAATCCAATTGGA+GGG - chr8_1:81481980-81481999 Msa1218820:CDS 50.0%
CGATATCCTCTGCGTTGTGA+AGG - chr8_1:81482217-81482236 Msa1218820:intron 50.0%
TGGCATGCCAGATGCATCTT+GGG + chr8_1:81482421-81482440 None:intergenic 50.0%
TTGGCATGCCAGATGCATCT+TGG + chr8_1:81482422-81482441 None:intergenic 50.0%
GCAGCAGCAGGAATTTAGTG+AGG + chr8_1:81482458-81482477 None:intergenic 50.0%
TTGATGTTACTGGCAGCAGC+AGG + chr8_1:81482470-81482489 None:intergenic 50.0%
TGTATACGCAGAACTGCGGA+AGG - chr8_1:81482644-81482663 Msa1218820:CDS 50.0%
CAATGTGCCTTACAGCGATG+GGG + chr8_1:81482786-81482805 None:intergenic 50.0%
! TCTGAGATGCATTCGCGCAT+GGG + chr8_1:81482833-81482852 None:intergenic 50.0%
!! GGTGCAGAAAGCACTGCAAA+AGG - chr8_1:81482930-81482949 Msa1218820:CDS 50.0%
!! AAGCATTGGTTACGAGCCCA+CGG + chr8_1:81483204-81483223 None:intergenic 50.0%
GATGCACTCTACGTTCACCT+AGG + chr8_1:81483595-81483614 None:intergenic 50.0%
CCTAATAGCCACTGGGTTTG+GGG - chr8_1:81483710-81483729 Msa1218820:intron 50.0%
ATCCACAATCCAACAGGCAC+CGG + chr8_1:81483748-81483767 None:intergenic 50.0%
CAGACGATCCACAATCCAAC+AGG + chr8_1:81483754-81483773 None:intergenic 50.0%
CGTAGCCTGTGAGTATGTGA+TGG - chr8_1:81483956-81483975 Msa1218820:five_prime_UTR 50.0%
!!! GGGGTTGATGCGGGATTTTC+TGG + chr8_1:81478618-81478637 None:intergenic 55.0%
!! AGGTGAATCGGGGGTTGATG+CGG + chr8_1:81478628-81478647 None:intergenic 55.0%
AGGTGAGGTAGGTGAATCGG+GGG + chr8_1:81478637-81478656 None:intergenic 55.0%
GTTAAAACCGGCGGAAGGTG+AGG + chr8_1:81478652-81478671 None:intergenic 55.0%
!! TCGGTGTTAAAACCGGCGGA+AGG + chr8_1:81478657-81478676 None:intergenic 55.0%
GGTTCGTCGCGGATGATATC+GGG + chr8_1:81478738-81478757 None:intergenic 55.0%
CGAACCAGATCCAGAGGAAG+AGG - chr8_1:81478752-81478771 Msa1218820:three_prime_UTR 55.0%
GCCGATCAGTTCGAATCGGT+TGG - chr8_1:81478944-81478963 Msa1218820:three_prime_UTR 55.0%
AAAGGGCCAGAGCTGATCAC+AGG - chr8_1:81479570-81479589 Msa1218820:intron 55.0%
AAGTGCGCCGTTTCATAGCC+AGG - chr8_1:81479875-81479894 Msa1218820:CDS 55.0%
CTCACTCTTCAAGAGAGCCC+TGG - chr8_1:81480873-81480892 Msa1218820:CDS 55.0%
AGCCCTGGAATAGTTCCTGC+AGG - chr8_1:81480888-81480907 Msa1218820:CDS 55.0%
CGTCCTGCAGGAACTATTCC+AGG + chr8_1:81480894-81480913 None:intergenic 55.0%
AGGACGACTGCCGAGATACA+AGG - chr8_1:81480908-81480927 Msa1218820:intron 55.0%
CTGATTGACTGTGCTCGACC+TGG - chr8_1:81480951-81480970 Msa1218820:intron 55.0%
TTGGGCAAAGACCCCCGAAT+TGG - chr8_1:81481237-81481256 Msa1218820:intron 55.0%
AGGGTCCATTCCCTTGTGAC+TGG + chr8_1:81481701-81481720 None:intergenic 55.0%
CACAAGGGAATGGACCCTTG+AGG - chr8_1:81481703-81481722 Msa1218820:intron 55.0%
CAAGGGAATGGACCCTTGAG+GGG - chr8_1:81481705-81481724 Msa1218820:intron 55.0%
AAGGGAATGGACCCTTGAGG+GGG - chr8_1:81481706-81481725 Msa1218820:intron 55.0%
! GCCCTTGTTCTAGCTGACAG+AGG - chr8_1:81481731-81481750 Msa1218820:intron 55.0%
TCTGCTGCTCCATGGCTTCA+TGG + chr8_1:81481900-81481919 None:intergenic 55.0%
GCTTATGCTCTGCTGCTCCA+TGG + chr8_1:81481908-81481927 None:intergenic 55.0%
GCTGCTGCCAATCCAATTGG+AGG - chr8_1:81481979-81481998 Msa1218820:CDS 55.0%
CTGCCAATCCAATTGGAGGG+AGG - chr8_1:81481983-81482002 Msa1218820:CDS 55.0%
AGCGAGTCCCAAGATGCATC+TGG - chr8_1:81482411-81482430 Msa1218820:CDS 55.0%
AAGGAGTCCCCATCGCTGTA+AGG - chr8_1:81482776-81482795 Msa1218820:intron 55.0%
! GTCTGAGATGCATTCGCGCA+TGG + chr8_1:81482834-81482853 None:intergenic 55.0%
CCCCAAACCCAGTGGCTATT+AGG + chr8_1:81483713-81483732 None:intergenic 55.0%
TCCACAATCCAACAGGCACC+GGG + chr8_1:81483747-81483766 None:intergenic 55.0%
!! GGTGAATCGGGGGTTGATGC+GGG + chr8_1:81478627-81478646 None:intergenic 60.0%
TCACCTACCTCACCTTCCGC+CGG - chr8_1:81478642-81478661 Msa1218820:three_prime_UTR 60.0%
AAACCGGCGGAAGGTGAGGT+AGG + chr8_1:81478648-81478667 None:intergenic 60.0%
ATCGTCTTCAGATGCGCGGC+TGG + chr8_1:81478700-81478719 None:intergenic 60.0%
! CCTCTGGATCTGGTTCGTCG+CGG + chr8_1:81478749-81478768 None:intergenic 60.0%
CCTCCGTCATGGAGAAGCTG+AGG + chr8_1:81479085-81479104 None:intergenic 60.0%
CCTCAGCTTCTCCATGACGG+AGG - chr8_1:81479082-81479101 Msa1218820:CDS 60.0%
GGAGTTGTAACCAGGCGCTC+TGG - chr8_1:81480412-81480431 Msa1218820:intron 60.0%
TATCTCGGCAGTCGTCCTGC+AGG + chr8_1:81480906-81480925 None:intergenic 60.0%
AGCAGATGCCCCTTTGCCAG+TGG + chr8_1:81481648-81481667 None:intergenic 60.0%
!! TGGCAAAGGGGCATCTGCTG+TGG - chr8_1:81481649-81481668 Msa1218820:CDS 60.0%
!! GGCAAAGGGGCATCTGCTGT+GGG - chr8_1:81481650-81481669 Msa1218820:CDS 60.0%
AGGGAATGGACCCTTGAGGG+GGG - chr8_1:81481707-81481726 Msa1218820:intron 60.0%
AACAAGGGCTCCCCCCTCAA+GGG + chr8_1:81481720-81481739 None:intergenic 60.0%
TGGCATGCCAACTGACCCAG+AGG - chr8_1:81482431-81482450 Msa1218820:CDS 60.0%
GTGAGGACCTCTGGGTCAGT+TGG + chr8_1:81482441-81482460 None:intergenic 60.0%
CATACTGGCCCCAAACCCAG+TGG + chr8_1:81483721-81483740 None:intergenic 60.0%
! CACTGGGTTTGGGGCCAGTA+TGG - chr8_1:81483719-81483738 Msa1218820:intron 60.0%
! TTTGGGGCCAGTATGGTGCC+CGG - chr8_1:81483726-81483745 Msa1218820:CDS 60.0%
CCGCGACGAACCAGATCCAG+AGG - chr8_1:81478746-81478765 Msa1218820:three_prime_UTR 65.0%
! GGGGAAAACTCCAGAGCGCC+TGG + chr8_1:81480425-81480444 None:intergenic 65.0%
GAACAAGGGCTCCCCCCTCA+AGG + chr8_1:81481721-81481740 None:intergenic 65.0%
!! ACAGGCACCGGGCACCATAC+TGG + chr8_1:81483736-81483755 None:intergenic 65.0%
GTATGGTGCCCGGTGCCTGT+TGG - chr8_1:81483736-81483755 Msa1218820:CDS 65.0%
GCCCGGTGCCTGTTGGATTG+TGG - chr8_1:81483743-81483762 Msa1218820:CDS 65.0%
GCGCGGCTGGTGTGAGTGTG+AGG + chr8_1:81478687-81478706 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 81478544 81483990 81478544 ID=Msa1218820;Name=Msa1218820
chr8_1 mRNA 81478544 81483990 81478544 ID=Msa1218820-mRNA-1;Parent=Msa1218820;Name=Msa1218820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=65|1|1|1|0.94|0.88|18|472|929
chr8_1 exon 81478544 81478617 81478544 ID=Msa1218820-mRNA-1:exon:28849;Parent=Msa1218820-mRNA-1
chr8_1 exon 81478638 81479152 81478638 ID=Msa1218820-mRNA-1:exon:28848;Parent=Msa1218820-mRNA-1
chr8_1 exon 81479231 81479392 81479231 ID=Msa1218820-mRNA-1:exon:28847;Parent=Msa1218820-mRNA-1
chr8_1 exon 81479583 81479765 81479583 ID=Msa1218820-mRNA-1:exon:28846;Parent=Msa1218820-mRNA-1
chr8_1 exon 81479860 81479985 81479860 ID=Msa1218820-mRNA-1:exon:28845;Parent=Msa1218820-mRNA-1
chr8_1 exon 81480082 81480219 81480082 ID=Msa1218820-mRNA-1:exon:28844;Parent=Msa1218820-mRNA-1
chr8_1 exon 81480296 81480380 81480296 ID=Msa1218820-mRNA-1:exon:28843;Parent=Msa1218820-mRNA-1
chr8_1 exon 81480530 81480646 81480530 ID=Msa1218820-mRNA-1:exon:28842;Parent=Msa1218820-mRNA-1
chr8_1 exon 81480736 81480924 81480736 ID=Msa1218820-mRNA-1:exon:28841;Parent=Msa1218820-mRNA-1
chr8_1 exon 81481015 81481187 81481015 ID=Msa1218820-mRNA-1:exon:28840;Parent=Msa1218820-mRNA-1
chr8_1 exon 81481268 81481459 81481268 ID=Msa1218820-mRNA-1:exon:28839;Parent=Msa1218820-mRNA-1
chr8_1 exon 81481551 81481685 81481551 ID=Msa1218820-mRNA-1:exon:28838;Parent=Msa1218820-mRNA-1
chr8_1 exon 81481949 81482156 81481949 ID=Msa1218820-mRNA-1:exon:28837;Parent=Msa1218820-mRNA-1
chr8_1 exon 81482240 81482459 81482240 ID=Msa1218820-mRNA-1:exon:28836;Parent=Msa1218820-mRNA-1
chr8_1 exon 81482546 81482735 81482546 ID=Msa1218820-mRNA-1:exon:28835;Parent=Msa1218820-mRNA-1
chr8_1 exon 81482825 81482994 81482825 ID=Msa1218820-mRNA-1:exon:28834;Parent=Msa1218820-mRNA-1
chr8_1 exon 81483431 81483612 81483431 ID=Msa1218820-mRNA-1:exon:28833;Parent=Msa1218820-mRNA-1
chr8_1 exon 81483723 81483990 81483723 ID=Msa1218820-mRNA-1:exon:28832;Parent=Msa1218820-mRNA-1
chr8_1 five_prime_UTR 81483926 81483990 81483926 ID=Msa1218820-mRNA-1:five_prime_utr;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81483723 81483925 81483723 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81483431 81483612 81483431 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81482825 81482994 81482825 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81482546 81482735 81482546 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81482240 81482459 81482240 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81481949 81482156 81481949 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81481551 81481685 81481551 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81481268 81481459 81481268 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81481015 81481187 81481015 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81480736 81480924 81480736 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81480530 81480646 81480530 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81480296 81480380 81480296 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81480082 81480219 81480082 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81479860 81479985 81479860 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81479583 81479765 81479583 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81479231 81479392 81479231 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 CDS 81479036 81479152 81479036 ID=Msa1218820-mRNA-1:cds;Parent=Msa1218820-mRNA-1
chr8_1 three_prime_UTR 81478638 81479035 81478638 ID=Msa1218820-mRNA-1:three_prime_utr;Parent=Msa1218820-mRNA-1
chr8_1 three_prime_UTR 81478544 81478617 81478544 ID=Msa1218820-mRNA-1:three_prime_utr;Parent=Msa1218820-mRNA-1
Gene Sequence

>Msa1218820

ATGGATCCAGAAAATCCCGCATCAACCCCCGATTCACCTACCTCACCTTCCGCCGGTTTTAACACCGATCAACTTCCTCACACTCACACCAGCCGCGCATCTGAAGACGATGAAGCTTCCGTTGATCCCGATATCATCCGCGACGAACCAGATCCAGAGGAAGAGGAAGATGGAGAAGATCTCTACAATGATAACTTTCTCGATGATTATCAGAGGATGGGTGAAGCCGATCAGTTCGAATCGGTTGGGTTGGATGATTCGGTTGAGGATGAGAGAGATTTTGATCAGATCATGGAGGATCGTAGAGCTGCTGAGATTGAACTTGATACTCGTGATGGCCGCGCTTCCAATCGCTCTAAACTTCCTCAGCTTCTCCATGACGGAGATACGGATGATGACAGTTACAGGCCCTCTAAAAGGGCCAGAGCTGATCACAGGTCTTCTGCACCGAGTGACGATGATCTTGATGGGATGAATAGTTCACCTGGAAGGTCACAAAGACACTCAAGGGAGGATAATCCAACTACTGATCAAAATGAGGATGATCAATATGAGGAGGATTTTGATGATGAAGCTGGGTATGAGATGTACCGTGTTCAAGGAACTCTTAGAGAATGGGTTACAAGAGATGAAGTGCGCCGTTTCATAGCCAGGAAATTCAAGGATTTCTTACTCTCTTACGTCAACCCAAAGAATGAACATGGAGACTTTGAATATGTGCGTCTGATAAGTGAAATGGTGTCAGCTAACAAGTGCAGTTTGGAGATAGATTACAAGCAGTTTATCTATGTCCATCCCAACATTGCCATTTGGCTAGCTGATGCACCTCATTCTGTTTTAGAAGTAATGGAAGATGTTGCTAAAAGTGTTGTCTTTAACTTGCATGCAAATTACAAACATATACATCAAAAGATATATGTTCGCATTACCAACTTACCAGTTTATGACCAGATTCGAAATATCAGGCAGATCCATTTGAATACAATGATTCGAATTGGGGGAGTTGTAACCAGGCGCTCTGGAGTTTTCCCCCAGTTGCAACAGGTTAAGTATGACTGTGGCAAATGTGGGGCAGTTTTGGGACCATTTTTTCAGAATTCTTATTCAGAGGTGAAAGTTGGTTCCTGTCCTGAGTGTCAATCAAAAGGACCGTTCACTGTCAATATTGAACAGACAATTTACAGGAATTTTCAAAAGCTCACTCTTCAAGAGAGCCCTGGAATAGTTCCTGCAGGACGACTGCCGAGATACAAGGAAGTGATACTATTGAATGATCTGATTGACTGTGCTCGACCTGGAGAAGAGATTGAGGTCACAGGTGTTTATACTAATAACTTCGACTTGTCCCTGAACACAAAGAATGGTTTTCCGGTGTTTTCCACTGTTGTTGAGGCTAATTATGTTACAAAGAAGCAAGACCTCTTCTCTGCCTACAAACTTACACAGGAAGACAAAGAGGAGATTGAAAATTTGGGCAAAGACCCCCGAATTGGAGAAAGGATTATCAAGTCCATTGCTCCATCAATCTATGGTCACGATGATATAAAAACTGCAATAGCCTTAGCTATGTTTGGAGGTCAAGAAAAGAATGTTGAAGGGAAGCATAGACTACGAGGAGACATAAATGTTCTTCTTCTCGGTGATCCAGGAACAGCAAAGTCTCAATTTCTTAAATATGTTGAAAAAACTGGACAGAGAGCTGTATACACCACTGGCAAAGGGGCATCTGCTGTGGGTCTCACAGCTGCAGTCCACAAAGATCCAGTCACAAGGGAATGGACCCTTGAGGGGGGAGCCCTTGTTCTAGCTGACAGAGGAATTTGTCTCATTGATGAATTTGACAAGATGAATGACCAGGATCGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGCATAAGCATATCAAAAGCTGGAATTGTCACATCTCTTCAGGCACGCTGTTCTGTCATTGCTGCTGCCAATCCAATTGGAGGGAGATATGATTCATCAAAATTGTTTACTCAAAACGTTGAATTGACAGATCCTATTATTTCTCGTTTCGATATCCTCTGCGTTGTGAAGGATGTAGTTGATCCAGTCACTGATGAAATGCTTGCAAAGTTTGTTGTTGACAGTCACTTCAAGTCACAACCTAAGGGTGGTAACAATGACTCTGTGAGCGAGTCCCAAGATGCATCTGGCATGCCAACTGACCCAGAGATACTTCCTCAAGATCTGTTGAAGAAGTACGTTACATATGCCAAGTTGAATGTTTTCCCAAGGTTACATGATGCTGATTTGAATAAACTTTCACATGTATACGCAGAACTGCGGAAGGAATCATCACACGGACAAGGAGTCCCCATCGCTGTAAGGCACATTGAATCAATGATAAGGATGTCTGAAGCCCATGCGCGAATGCATCTCAGACAGCATGTCATACAAGAGGATGTGGACATGGCAATTCGTGTACTACTTGACTCATTCATTTCTACCCAAAAGTTTGGGGTGCAGAAAGCACTGCAAAAGAGCTTTAGAAAGTATATGACTTTCAAGAAAGACTATAATGATATGCTCATTTATATTCTCCGTGGGCTCGTAACCAATGCTTTGCATTTGGAAGACATTCTCACTGGATCTACATCAAGTCTAACCCATGTAGATATCAAAGTAGATGATCTCTCCTTCAAGGCTCAAGAGCATGAAATATATGATCTGACACCCTTCTTCAACAGCAGCATATTTTCAAATGCCAATTTTGAATTGGATAAAGAACGAGGAGTTATCAGACATTATCTCACTAGGTGA
Protein sequence

>Msa1218820

MDPENPASTPDSPTSPSAGFNTDQLPHTHTSRASEDDEASVDPDIIRDEPDPEEEEDGEDLYNDNFLDDYQRMGEADQFESVGLDDSVEDERDFDQIMEDRRAAEIELDTRDGRASNRSKLPQLLHDGDTDDDSYRPSKRARADHRSSAPSDDDLDGMNSSPGRSQRHSREDNPTTDQNEDDQYEEDFDDEAGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLSYVNPKNEHGDFEYVRLISEMVSANKCSLEIDYKQFIYVHPNIAIWLADAPHSVLEVMEDVAKSVVFNLHANYKHIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCGKCGAVLGPFFQNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGVYTNNFDLSLNTKNGFPVFSTVVEANYVTKKQDLFSAYKLTQEDKEEIENLGKDPRIGERIIKSIAPSIYGHDDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKLFTQNVELTDPIISRFDILCVVKDVVDPVTDEMLAKFVVDSHFKSQPKGGNNDSVSESQDASGMPTDPEILPQDLLKKYVTYAKLNVFPRLHDADLNKLSHVYAELRKESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVIQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNDMLIYILRGLVTNALHLEDILTGSTSSLTHVDIKVDDLSFKAQEHEIYDLTPFFNSSIFSNANFELDKERGVIRHYLTR*