AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1338210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338210 MtrunA17_Chr6g0470541 96.889 900 27 1 1 899 1 900 0.0 1782
Msa1338210 MtrunA17_Chr7g0238581 36.281 441 248 13 5 415 25 462 7.59e-67 235
Msa1338210 MtrunA17_Chr7g0238581 39.669 121 66 3 784 899 511 629 3.27e-17 86.3
Msa1338210 MtrunA17_Chr1g0182151 27.907 344 212 11 6 317 55 394 1.70e-29 126
Msa1338210 MtrunA17_Chr4g0035661 28.882 322 211 11 6 317 90 403 4.67e-27 119
Msa1338210 MtrunA17_Chr2g0307481 28.938 273 184 6 38 302 106 376 4.69e-27 117
Msa1338210 MtrunA17_Chr5g0407791 28.339 307 204 7 5 301 889 1189 4.70e-27 119
Msa1338210 MtrunA17_Chr3g0132921 30.556 288 165 9 47 302 44 328 4.84e-27 116
Msa1338210 MtrunA17_Chr3g0145071 28.571 322 212 11 6 317 100 413 2.97e-26 116
Msa1338210 MtrunA17_Chr8g0369881 30.530 321 179 11 5 301 875 1175 3.41e-26 116
Msa1338210 MtrunA17_Chr4g0045381 28.655 342 206 14 6 317 194 527 1.55e-24 111
Msa1338210 MtrunA17_Chr2g0331761 31.095 283 165 13 51 316 235 504 2.10e-24 109
Msa1338210 MtrunA17_Chr2g0327581 26.647 334 212 12 51 354 96 426 3.24e-24 109
Msa1338210 MtrunA17_Chr7g0245931 29.537 281 171 5 48 302 95 374 5.02e-24 108
Msa1338210 MtrunA17_Chr7g0266631 27.090 299 185 10 51 317 56 353 1.30e-23 107
Msa1338210 MtrunA17_Chr3g0134191 27.356 329 179 13 51 326 47 368 1.44e-23 107
Msa1338210 MtrunA17_Chr5g0427481 29.470 302 175 11 51 317 56 354 1.50e-23 107
Msa1338210 MtrunA17_Chr6g0485471 27.402 281 178 9 51 316 165 434 2.94e-23 105
Msa1338210 MtrunA17_Chr1g0191851 28.213 319 214 9 6 313 148 462 3.76e-23 105
Msa1338210 MtrunA17_Chr1g0191181 29.091 330 197 13 51 354 128 446 4.15e-23 105
Msa1338210 MtrunA17_Chr4g0062291 28.736 261 175 5 51 302 176 434 5.41e-23 105
Msa1338210 MtrunA17_Chr1g0178411 27.817 284 172 10 66 317 75 357 9.36e-23 105
Msa1338210 MtrunA17_Chr1g0153061 28.338 367 197 18 51 358 47 406 2.00e-22 103
Msa1338210 MtrunA17_Chr5g0411971 27.202 386 254 15 2 370 396 771 2.28e-22 103
Msa1338210 MtrunA17_Chr2g0295881 27.397 292 176 9 51 316 248 529 2.38e-22 103
Msa1338210 MtrunA17_Chr7g0258991 27.451 306 204 9 6 301 74 371 2.81e-22 103
Msa1338210 MtrunA17_Chr2g0322291 26.879 346 207 14 6 317 89 422 3.92e-22 103
Msa1338210 MtrunA17_Chr1g0193221 29.032 310 192 11 4 296 2 300 1.27e-21 101
Msa1338210 MtrunA17_Chr5g0421591 27.249 389 250 16 2 370 371 746 1.61e-21 100
Msa1338210 MtrunA17_Chr5g0421521 27.506 389 249 16 2 370 371 746 1.90e-21 100
Msa1338210 MtrunA17_Chr3g0142261 26.567 335 209 13 4 314 18 339 4.48e-21 99.8
Msa1338210 MtrunA17_Chr5g0398521 28.369 282 168 8 51 302 103 380 4.99e-21 99.4
Msa1338210 MtrunA17_Chr4g0053211 27.362 307 168 10 48 302 48 351 6.74e-21 99.0
Msa1338210 MtrunA17_Chr7g0272871 26.019 319 221 8 6 313 128 442 9.64e-21 97.8
Msa1338210 MtrunA17_Chr4g0070001 26.367 311 208 10 4 303 142 442 1.99e-20 97.4
Msa1338210 MtrunA17_Chr4g0067421 27.586 290 174 12 54 316 255 535 2.80e-20 96.7
Msa1338210 MtrunA17_Chr5g0405181 24.103 390 245 12 4 369 19 381 3.75e-20 96.3
Msa1338210 MtrunA17_Chr5g0447041 26.596 376 200 16 6 316 435 799 3.88e-20 96.7
Msa1338210 MtrunA17_Chr3g0102921 26.378 508 316 21 6 474 439 927 3.99e-20 96.7
Msa1338210 MtrunA17_Chr2g0312631 26.687 326 219 9 6 316 385 705 5.98e-20 95.9
Msa1338210 MtrunA17_Chr1g0192481 30.242 248 155 8 70 301 120 365 1.22e-19 94.0
Msa1338210 MtrunA17_Chr1g0152231 28.522 291 186 8 47 317 42 330 1.68e-19 94.4
Msa1338210 MtrunA17_Chr7g0271961 31.405 242 151 9 70 301 466 702 1.81e-19 94.4
Msa1338210 MtrunA17_Chr8g0367581 28.182 330 208 14 6 321 147 461 1.14e-18 92.0
Msa1338210 MtrunA17_Chr6g0483701 26.126 333 210 13 5 314 30 349 2.02e-18 90.9
Msa1338210 MtrunA17_Chr8g0372171 24.173 393 248 15 2 370 16 382 2.17e-18 90.9
Msa1338210 MtrunA17_Chr4g0036001 24.214 318 212 11 2 302 21 326 4.93e-18 89.4
Msa1338210 MtrunA17_Chr2g0280421 29.562 274 171 11 46 301 476 745 8.91e-18 88.6
Msa1338210 MtrunA17_Chr8g0377731 29.603 277 159 10 73 316 113 386 9.01e-18 89.0
Msa1338210 MtrunA17_Chr7g0257301 28.028 289 165 10 69 316 453 739 9.30e-18 89.0
Msa1338210 MtrunA17_Chr3g0122121 29.008 262 151 11 73 302 158 416 2.13e-17 87.8
Msa1338210 MtrunA17_Chr1g0195111 28.483 323 187 16 6 301 397 702 2.13e-17 87.4
Msa1338210 MtrunA17_Chr4g0049011 25.460 326 205 11 6 301 280 597 2.96e-17 86.7
Msa1338210 MtrunA17_Chr4g0069141 25.926 297 190 10 49 317 193 487 4.27e-17 87.0
Msa1338210 MtrunA17_Chr4g0042061 26.263 297 189 8 51 319 479 773 4.62e-17 86.3
Msa1338210 MtrunA17_Chr2g0319271 25.725 276 178 6 51 301 446 719 2.15e-16 84.0
Msa1338210 MtrunA17_Chr5g0445211 26.316 285 173 12 50 301 108 388 1.13e-13 75.5
Msa1338210 MtrunA17_Chr8g0386891 36.585 123 75 2 197 316 30 152 2.37e-12 70.1
Msa1338210 MtrunA17_Chr7g0269681 40.367 109 58 4 197 301 67 172 2.69e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338210 AT5G23910.2 52.083 288 127 6 35 318 40 320 4.37e-83 282
Msa1338210 AT5G23910.2 37.190 242 91 8 658 898 524 705 4.51e-31 131
Msa1338210 AT5G23910.1 52.083 288 127 6 35 318 36 316 5.17e-83 282
Msa1338210 AT5G23910.1 37.190 242 91 8 658 898 520 701 4.02e-31 131
Msa1338210 AT5G02370.1 43.653 323 165 7 6 317 21 337 1.66e-69 241
Msa1338210 AT1G18550.1 27.848 316 205 8 5 302 151 461 5.69e-27 118
Msa1338210 AT5G65930.3 28.339 307 206 7 5 302 894 1195 5.21e-26 116
Msa1338210 AT5G65930.2 28.339 307 206 7 5 302 888 1189 5.66e-26 115
Msa1338210 AT5G65930.1 28.339 307 206 7 5 302 887 1188 5.70e-26 115
Msa1338210 AT5G60930.3 29.363 361 196 15 6 317 7 357 1.16e-25 115
Msa1338210 AT5G60930.1 29.363 361 196 15 6 317 7 357 1.34e-25 114
Msa1338210 AT5G60930.2 29.363 361 196 15 6 317 7 357 1.50e-25 114
Msa1338210 AT2G37420.1 28.395 324 203 10 6 302 49 370 3.10e-25 113
Msa1338210 AT2G37420.2 28.395 324 203 10 6 302 49 370 3.10e-25 113
Msa1338210 AT4G39050.1 28.261 322 213 11 6 317 99 412 3.69e-25 113
Msa1338210 AT3G45850.2 25.526 333 217 11 51 354 102 432 2.50e-24 110
Msa1338210 AT3G45850.1 25.526 333 217 11 51 354 102 432 2.50e-24 110
Msa1338210 AT2G22610.1 29.677 310 197 11 6 302 418 719 2.83e-24 110
Msa1338210 AT2G22610.3 29.677 310 197 11 6 302 419 720 2.96e-24 110
Msa1338210 AT2G22610.2 29.677 310 197 11 6 302 418 719 3.09e-24 110
Msa1338210 AT2G28620.3 26.730 318 202 10 66 354 112 427 6.48e-24 108
Msa1338210 AT2G28620.2 26.730 318 202 10 66 354 112 427 6.48e-24 108
Msa1338210 AT2G28620.1 26.730 318 202 10 66 354 112 427 6.77e-24 108
Msa1338210 AT1G12430.1 28.674 279 170 5 51 302 116 392 8.31e-24 108
Msa1338210 AT1G12430.2 28.674 279 170 5 51 302 116 392 8.46e-24 108
Msa1338210 AT2G21380.2 27.329 322 216 11 6 317 105 418 1.14e-23 108
Msa1338210 AT2G21380.1 27.329 322 216 11 6 317 105 418 1.14e-23 108
Msa1338210 AT2G36200.1 26.087 345 221 9 6 317 13 356 1.38e-23 108
Msa1338210 AT5G47820.2 28.698 338 175 15 47 326 46 375 1.44e-23 108
Msa1338210 AT5G47820.1 28.698 338 175 15 47 326 46 375 1.44e-23 108
Msa1338210 AT3G44730.1 28.487 337 202 16 6 316 378 701 2.51e-23 107
Msa1338210 AT3G44730.4 28.487 337 202 16 6 316 378 701 2.51e-23 107
Msa1338210 AT3G44730.2 28.487 337 202 16 6 316 423 746 2.62e-23 107
Msa1338210 AT3G44730.3 28.487 337 202 16 6 316 423 746 2.62e-23 107
Msa1338210 AT5G27950.1 28.044 271 177 5 47 301 115 383 2.90e-23 105
Msa1338210 AT2G36200.2 26.087 345 221 9 6 317 13 356 3.06e-23 107
Msa1338210 AT5G06670.8 25.817 306 211 6 6 302 67 365 2.19e-22 103
Msa1338210 AT5G06670.4 25.817 306 211 6 6 302 67 365 2.19e-22 103
Msa1338210 AT5G06670.7 25.817 306 211 6 6 302 67 365 2.19e-22 103
Msa1338210 AT3G16060.1 30.035 283 168 13 51 316 219 488 2.40e-22 103
Msa1338210 AT5G06670.5 25.817 306 211 6 6 302 67 365 2.73e-22 103
Msa1338210 AT5G06670.2 25.817 306 211 6 6 302 67 365 3.75e-22 103
Msa1338210 AT5G06670.3 25.817 306 211 6 6 302 67 365 3.75e-22 103
Msa1338210 AT3G10180.2 26.429 420 272 13 4 396 2 411 9.89e-22 102
Msa1338210 AT1G21730.1 25.758 330 220 11 6 321 76 394 1.13e-21 101
Msa1338210 AT3G10180.1 26.429 420 272 13 4 396 2 411 1.27e-21 102
Msa1338210 AT1G55550.1 24.702 336 236 8 35 356 114 446 1.47e-21 101
Msa1338210 AT1G72250.2 27.419 310 206 8 6 301 501 805 1.60e-21 101
Msa1338210 AT1G72250.1 27.419 310 206 8 6 301 492 796 1.63e-21 101
Msa1338210 AT1G72250.3 27.419 310 206 8 6 301 513 817 1.63e-21 101
Msa1338210 AT1G72250.4 27.419 310 206 8 6 301 512 816 1.72e-21 101
Msa1338210 AT3G17360.1 27.852 298 183 10 49 317 208 502 2.20e-21 101
Msa1338210 AT1G01950.1 29.537 281 165 9 51 302 106 382 2.25e-21 100
Msa1338210 AT3G17360.2 27.852 298 183 10 49 317 208 502 2.29e-21 101
Msa1338210 AT3G17360.3 27.852 298 183 10 49 317 208 502 2.37e-21 101
Msa1338210 AT1G01950.2 29.537 281 165 9 51 302 106 382 2.59e-21 100
Msa1338210 AT1G01950.3 29.537 281 165 9 51 302 106 382 3.39e-21 100
Msa1338210 AT5G27550.2 26.852 324 220 10 6 316 133 452 3.52e-21 99.8
Msa1338210 AT5G27550.1 26.852 324 220 10 6 316 133 452 3.52e-21 99.8
Msa1338210 AT3G12020.4 26.299 308 207 7 6 302 70 368 4.02e-21 100
Msa1338210 AT3G12020.1 26.299 308 207 7 6 302 70 368 4.02e-21 100
Msa1338210 AT1G18410.5 27.576 330 198 11 6 313 480 790 4.24e-21 100
Msa1338210 AT3G63480.2 28.037 321 197 12 6 302 4 314 5.42e-21 97.8
Msa1338210 AT1G18410.1 27.987 318 188 11 6 301 633 931 6.87e-21 99.4
Msa1338210 AT3G12020.3 26.299 308 207 7 6 302 70 368 9.61e-21 99.0
Msa1338210 AT3G12020.2 26.299 308 207 7 6 302 70 368 9.61e-21 99.0
Msa1338210 AT1G18410.3 26.269 335 204 10 6 313 490 808 1.38e-20 98.2
Msa1338210 AT1G18410.2 26.269 335 204 10 6 313 490 808 1.38e-20 98.2
Msa1338210 AT3G49650.1 30.035 283 178 8 50 317 65 342 1.72e-20 97.8
Msa1338210 AT1G18410.4 26.625 323 194 10 6 301 633 939 2.02e-20 97.8
Msa1338210 AT3G50240.2 25.836 329 184 13 51 326 64 385 2.12e-20 97.8
Msa1338210 AT3G50240.4 25.836 329 184 13 51 326 64 385 2.55e-20 97.4
Msa1338210 AT3G50240.1 25.836 329 184 13 51 326 64 385 2.60e-20 97.4
Msa1338210 AT1G73860.1 27.129 317 201 10 6 301 510 817 5.77e-20 96.3
Msa1338210 AT5G06670.6 25.079 315 211 7 6 302 67 374 7.21e-20 95.9
Msa1338210 AT5G06670.1 25.079 315 211 7 6 302 67 374 7.21e-20 95.9
Msa1338210 AT3G44050.1 27.907 301 176 11 34 302 119 410 8.17e-20 95.9
Msa1338210 AT3G16630.2 26.513 347 203 16 5 316 193 522 8.53e-20 95.5
Msa1338210 AT3G16630.1 26.513 347 203 16 5 316 193 522 8.53e-20 95.5
Msa1338210 AT1G73860.2 27.129 317 201 10 6 301 427 734 9.10e-20 95.5
Msa1338210 AT5G66310.2 24.841 314 213 10 4 302 17 322 1.13e-19 95.5
Msa1338210 AT5G66310.3 24.841 314 213 10 4 302 17 322 1.13e-19 95.5
Msa1338210 AT5G66310.1 24.841 314 213 10 4 302 17 322 1.13e-19 95.5
Msa1338210 AT3G63480.1 28.000 325 196 13 6 302 4 318 1.49e-19 93.2
Msa1338210 AT3G10310.2 30.483 269 159 11 69 316 424 685 1.74e-19 94.7
Msa1338210 AT5G27000.1 28.754 313 199 12 6 301 395 700 1.87e-19 94.7
Msa1338210 AT3G10310.1 30.483 269 159 11 69 316 424 685 2.32e-19 94.4
Msa1338210 AT3G54870.2 25.857 321 208 9 47 341 146 462 3.78e-19 93.6
Msa1338210 AT3G54870.1 25.857 321 208 9 47 341 146 462 4.67e-19 93.2
Msa1338210 AT2G21300.2 25.237 317 206 11 4 302 23 326 4.71e-19 93.2
Msa1338210 AT2G21300.4 25.237 317 206 11 4 302 23 326 4.71e-19 93.2
Msa1338210 AT2G21300.3 25.237 317 206 11 4 302 23 326 4.71e-19 93.2
Msa1338210 AT2G21300.1 25.237 317 206 11 4 302 23 326 4.71e-19 93.2
Msa1338210 AT2G21300.5 25.237 317 206 11 4 302 23 326 4.71e-19 93.2
Msa1338210 AT3G54870.3 25.857 321 208 9 47 341 146 462 4.75e-19 93.2
Msa1338210 AT1G63640.5 26.765 340 204 14 6 316 463 786 5.79e-19 93.2
Msa1338210 AT1G63640.2 26.706 337 201 14 6 316 473 789 5.85e-19 93.2
Msa1338210 AT1G63640.3 26.765 340 204 14 6 316 473 796 6.07e-19 93.2
Msa1338210 AT1G63640.1 26.765 340 204 14 6 316 473 796 6.23e-19 93.2
Msa1338210 AT1G63640.4 26.765 340 204 14 6 316 473 796 6.23e-19 93.2
Msa1338210 AT4G14150.1 28.276 290 169 11 47 302 122 406 8.76e-19 92.8
Msa1338210 AT5G65460.4 27.692 260 172 6 51 302 181 432 1.10e-18 92.4
Msa1338210 AT5G65460.2 27.692 260 172 6 51 302 181 432 1.11e-18 92.4
Msa1338210 AT5G65460.1 27.692 260 172 6 51 302 181 432 1.19e-18 92.4
Msa1338210 AT5G65460.6 27.692 260 172 6 51 302 181 432 1.26e-18 92.0
Msa1338210 AT3G23670.2 29.771 262 149 11 73 302 153 411 4.85e-18 90.1
Msa1338210 AT3G43210.3 25.879 313 208 10 4 303 28 329 4.86e-18 90.1
Msa1338210 AT3G43210.5 25.879 313 208 10 4 303 28 329 4.86e-18 90.1
Msa1338210 AT3G43210.2 25.879 313 208 10 4 303 28 329 4.86e-18 90.1
Msa1338210 AT3G43210.4 25.879 313 208 10 4 303 28 329 4.86e-18 90.1
Msa1338210 AT3G43210.1 25.879 313 208 10 4 303 28 329 4.86e-18 90.1
Msa1338210 AT4G38950.3 24.921 317 207 11 4 302 12 315 4.86e-18 90.1
Msa1338210 AT4G38950.5 24.921 317 207 11 4 302 12 315 4.86e-18 90.1
Msa1338210 AT4G38950.4 24.921 317 207 11 4 302 12 315 4.86e-18 90.1
Msa1338210 AT4G38950.1 24.921 317 207 11 4 302 12 315 4.86e-18 90.1
Msa1338210 AT4G38950.2 24.921 317 207 11 4 302 12 315 4.86e-18 90.1
Msa1338210 AT3G23670.1 29.771 262 149 11 73 302 153 411 6.32e-18 90.1
Msa1338210 AT1G59540.1 28.839 267 176 8 47 301 40 304 7.37e-18 89.4
Msa1338210 AT1G18370.1 24.129 373 250 12 4 354 30 391 1.08e-17 89.0
Msa1338210 AT4G21270.1 25.818 275 179 6 51 301 478 751 1.64e-17 88.2
Msa1338210 AT2G47500.1 24.920 313 209 9 6 301 400 703 2.04e-17 88.2
Msa1338210 AT2G47500.2 24.920 313 209 9 6 301 400 703 2.26e-17 87.8
Msa1338210 AT5G65460.3 27.341 267 171 7 51 302 181 439 2.48e-17 87.8
Msa1338210 AT4G05190.1 26.812 276 175 7 51 301 475 748 3.40e-17 87.0
Msa1338210 AT4G05190.2 26.812 276 175 7 51 301 462 735 3.53e-17 87.0
Msa1338210 AT3G19050.1 27.425 299 183 13 49 317 233 527 4.28e-17 87.4
Msa1338210 AT5G41310.1 26.462 325 206 13 6 316 423 728 4.61e-17 87.0
Msa1338210 AT1G09170.5 26.048 334 212 14 6 316 435 756 8.07e-17 86.3
Msa1338210 AT3G51150.1 24.522 314 214 10 4 302 16 321 1.01e-16 85.9
Msa1338210 AT3G51150.2 24.522 314 214 10 4 302 16 321 1.05e-16 85.9
Msa1338210 AT3G51150.4 24.522 314 214 10 4 302 16 321 1.05e-16 85.9
Msa1338210 AT3G51150.3 24.522 314 214 10 4 302 16 321 1.05e-16 85.9
Msa1338210 AT1G09170.1 26.006 323 190 12 6 316 435 720 1.91e-16 85.1
Msa1338210 AT5G10470.2 26.814 317 204 14 51 354 185 486 2.45e-16 84.7
Msa1338210 AT5G10470.1 26.814 317 204 14 51 354 185 486 2.56e-16 84.7
Msa1338210 AT1G09170.2 26.332 319 202 13 6 303 435 741 3.07e-16 84.3
Msa1338210 AT1G09170.4 26.332 319 202 13 6 303 435 741 3.09e-16 84.0
Msa1338210 AT4G24170.1 25.237 317 208 12 2 302 3 306 8.05e-16 82.8
Msa1338210 AT4G24170.2 25.237 317 208 12 2 302 3 306 8.05e-16 82.8
Msa1338210 AT1G09170.3 26.332 319 202 13 6 303 435 741 8.84e-16 82.8
Msa1338210 AT1G09170.7 26.332 319 202 13 6 303 435 741 8.84e-16 82.8
Msa1338210 AT5G54670.1 29.249 253 157 7 70 301 461 712 2.33e-15 81.3
Msa1338210 AT5G54670.2 29.249 253 157 7 70 301 461 712 2.33e-15 81.3
Msa1338210 AT5G54670.3 29.249 253 157 7 70 301 401 652 3.31e-15 80.5
Msa1338210 AT1G01950.4 29.388 245 140 9 87 302 1 241 8.93e-14 75.9
Msa1338210 AT1G09170.6 26.403 303 190 13 6 287 435 725 1.09e-13 75.9
Msa1338210 AT1G09170.8 26.403 303 190 13 6 287 435 725 1.09e-13 75.9
Msa1338210 AT4G27180.1 29.134 254 156 9 70 301 452 703 1.20e-13 75.5
Msa1338210 AT4G27180.2 29.134 254 156 9 70 301 452 703 1.20e-13 75.5
Msa1338210 AT3G50240.3 36.283 113 64 3 221 326 172 283 7.80e-13 73.2
Msa1338210 AT5G27950.2 26.147 218 144 4 100 301 1 217 3.40e-12 70.1

Find 167 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGATGCCATTGAAAATT+AGG 0.077859 tig0001724:-26561 None:intergenic
GACCATTCATGCTTTCATTT+TGG 0.083734 tig0001724:-28589 None:intergenic
CCTAGAAGATTGTTCTTTAA+AGG 0.102473 tig0001724:-26696 None:intergenic
CTTCCAGCATCAGGAGTTCT+TGG 0.180443 tig0001724:-31606 None:intergenic
TCCAGAACAACCACATATTT+TGG 0.199476 tig0001724:+28297 Msa1338210:CDS
ATCAGAAAAGCCGCGAATTT+TGG 0.254972 tig0001724:-26600 None:intergenic
ACATTCAATTTGCATGGTTC+TGG 0.267061 tig0001724:+31855 Msa1338210:CDS
TTTGATGCCATTGAAAATTA+GGG 0.272228 tig0001724:-26560 None:intergenic
CCTTTAAAGAACAATCTTCT+AGG 0.274890 tig0001724:+26696 Msa1338210:CDS
GCAACAAATTCTGCAATAAA+AGG 0.283432 tig0001724:+29806 Msa1338210:CDS
CAGCTGTGTTTAAAATTCTA+AGG 0.283512 tig0001724:-31987 None:intergenic
ATCTGCTATCGACAAATCTT+TGG 0.284251 tig0001724:-31124 None:intergenic
TGTTGACGCTGATACACTTT+GGG 0.291326 tig0001724:-29735 None:intergenic
TAGAGCATCGGAGTCTTTAT+TGG 0.294675 tig0001724:+30508 Msa1338210:CDS
CTTCCAGTATCAGGAGTTCT+TGG 0.299528 tig0001724:-31798 None:intergenic
ATTTATTACATCTCGTCTTT+TGG 0.300142 tig0001724:-31429 None:intergenic
AGTAAACTCTAGAGTAAATA+AGG 0.304679 tig0001724:+30328 Msa1338210:CDS
GAATGTTTCCCAAGGACTTT+TGG 0.305549 tig0001724:-31838 None:intergenic
ATATCTCATATAAAGGAAAA+TGG 0.312479 tig0001724:+29776 Msa1338210:CDS
TTTGTTCTGAAAGGGCTCTT+TGG 0.315176 tig0001724:+28150 Msa1338210:intron
CAAGGAGAACAACAACTTAA+TGG 0.316732 tig0001724:+31247 Msa1338210:CDS
GAATGTTTCCCAAGGACTTT+TGG 0.318016 tig0001724:-31453 None:intergenic
GAATGTTTCCCAAGGACTTT+TGG 0.318016 tig0001724:-31646 None:intergenic
CTCTTTGGAGAGACCGGGTT+TGG 0.323561 tig0001724:+28165 Msa1338210:CDS
GTATGATGAAATTCATATAT+TGG 0.325122 tig0001724:+32931 Msa1338210:three_prime_UTR
CCTGACTGAGTCCTTTAAAC+TGG 0.329209 tig0001724:-28342 None:intergenic
ATGAAAGCCGTGTTCCCTTC+CGG 0.330850 tig0001724:+28865 Msa1338210:CDS
TGAGCTTGCATTGTTCTTTG+TGG 0.332332 tig0001724:-29294 None:intergenic
AGAAGGAAATAGCCGTTAAA+AGG 0.343747 tig0001724:-26458 None:intergenic
CACGGAAGAATCCAGTTTAA+AGG 0.344771 tig0001724:+28331 Msa1338210:CDS
TTGGAGTAATTAATGACATA+TGG 0.345690 tig0001724:-31105 None:intergenic
CAATGGCATCAAAGAAGGTT+CGG 0.346172 tig0001724:+26570 Msa1338210:exon
TGAAAGCCGTGTTCCCTTCC+GGG 0.346745 tig0001724:+28866 Msa1338210:CDS
ACATCTCGTCTTCCAGTATC+AGG 0.352781 tig0001724:-31807 None:intergenic
ATTGCAGAATTCTCTTGTTA+AGG 0.355472 tig0001724:+31960 Msa1338210:intron
AAGAACTGTGGATTGGGTTT+CGG 0.357836 tig0001724:+26640 Msa1338210:CDS
TGCGTGTAAGTTTACTTTCC+CGG 0.358026 tig0001724:-28884 None:intergenic
TCGGTGAAGACTCAAGATTC+TGG 0.360329 tig0001724:+26659 Msa1338210:CDS
CATACACTCTTGAAAGGTTC+TGG 0.364143 tig0001724:-32419 None:intergenic
ACATTCAACATGAATGGTTC+TGG 0.364808 tig0001724:+31663 Msa1338210:CDS
CGCCTTACTGAATGTTTGTC+AGG 0.366880 tig0001724:+28830 Msa1338210:CDS
TTCACGCAATTGAGAACTAA+TGG 0.370766 tig0001724:-31291 None:intergenic
GGATGAATTAAAGAAGTTAA+AGG 0.373528 tig0001724:+32264 Msa1338210:CDS
ATTGTTCTTTGTGGAATCTA+AGG 0.379097 tig0001724:-29285 None:intergenic
TACTACTATTTATAAGCAAT+TGG 0.380392 tig0001724:+33003 Msa1338210:three_prime_UTR
TATTTACTCTAGAGTTTACT+TGG 0.381020 tig0001724:-30325 None:intergenic
TAGAAGAGAAGGAAAATAGA+AGG 0.382008 tig0001724:-26500 None:intergenic
AGGCTCCATATCTCATATAA+AGG 0.393108 tig0001724:+29769 Msa1338210:CDS
GAACCAAGAACTCCTGATAC+TGG 0.399693 tig0001724:+31795 Msa1338210:CDS
TTTCTACGAGGTTGATCATC+AGG 0.400292 tig0001724:+28252 Msa1338210:CDS
GGAGGTGAAGCCTCTTGTTT+CGG 0.403612 tig0001724:+27936 Msa1338210:CDS
TTCACGAAGCTCAAGTATAT+AGG 0.404322 tig0001724:-32390 None:intergenic
AACAGTACTGTTATTGCTCA+TGG 0.404603 tig0001724:+27976 Msa1338210:CDS
ACCAAAATATGTGGTTGTTC+TGG 0.408493 tig0001724:-28298 None:intergenic
TAAACTTACACGCATATTGC+AGG 0.409523 tig0001724:+28893 Msa1338210:CDS
AAAATTCAAGAACTGTGGAT+TGG 0.411519 tig0001724:+26633 Msa1338210:CDS
AACTCAGAAATGGATTTAAC+AGG 0.413773 tig0001724:-28461 None:intergenic
TTAACAGCTTGATGATTTGA+AGG 0.415735 tig0001724:+32567 Msa1338210:intron
TAATGAATACCAAAAGTCCT+TGG 0.423391 tig0001724:+31637 Msa1338210:CDS
TAATGAATACCAAAAGTCCT+TGG 0.423391 tig0001724:+31829 Msa1338210:CDS
TAAATTCTGGAACTCAGAAA+TGG 0.423566 tig0001724:-28471 None:intergenic
AAATTCAAGAACTGTGGATT+GGG 0.423587 tig0001724:+26634 Msa1338210:CDS
CGCTGCATGTTCTGCAAACA+AGG 0.425802 tig0001724:+28499 Msa1338210:CDS
TAATAAATACCAAAAGTCCT+TGG 0.425830 tig0001724:+31444 Msa1338210:CDS
AGCTTTAACAGCAGAGTGGC+TGG 0.428102 tig0001724:-29950 None:intergenic
GGACAAGAGAGAAACAAATA+AGG 0.429051 tig0001724:+32980 Msa1338210:three_prime_UTR
TCCCAAAATGAAAGCATGAA+TGG 0.431040 tig0001724:+28587 Msa1338210:CDS
TGTGAAATGCATCCGTTCTC+TGG 0.433089 tig0001724:-31356 None:intergenic
CATGAATGGTTCTGGAATGA+AGG 0.433280 tig0001724:+31671 Msa1338210:CDS
GGAATGATGAAGAAGGAAGT+TGG 0.434228 tig0001724:+32737 Msa1338210:CDS
TCTCCAGGTTATTTCGTTTG+AGG 0.440294 tig0001724:+31074 Msa1338210:intron
CAACAAGCACGGTTCTGAAA+TGG 0.440417 tig0001724:+31475 Msa1338210:CDS
CTTGATGATTTGAAGGACAT+TGG 0.451063 tig0001724:+32574 Msa1338210:CDS
TTGAAGAGAATTAGAAGAGA+AGG 0.452415 tig0001724:-26511 None:intergenic
ATTTGATCCCACAGTGGAAA+AGG 0.452582 tig0001724:+30917 Msa1338210:CDS
TGGGAAACATTCAACATGAA+TGG 0.452823 tig0001724:+31657 Msa1338210:CDS
TTGTTGACGCTGATACACTT+TGG 0.453279 tig0001724:-29736 None:intergenic
ATGCAGCGATGTATAAATTC+TGG 0.458838 tig0001724:-28484 None:intergenic
ACATCTCCTCTTCCAGCATC+AGG 0.459072 tig0001724:-31615 None:intergenic
TTGCCAAGACACTGTTTACA+TGG 0.460798 tig0001724:+29076 Msa1338210:CDS
TTTGCATGGTTCTGGAATGA+AGG 0.462616 tig0001724:+31863 Msa1338210:CDS
AAAGGGCTCTTTGGAGAGAC+CGG 0.466835 tig0001724:+28159 Msa1338210:intron
TAATGAATTACAGATACATA+TGG 0.471663 tig0001724:-32860 None:intergenic
TGCCATTGAAAATTAGGGTT+TGG 0.474028 tig0001724:-26555 None:intergenic
ACTAAACTCTAGAGTTGAAA+AGG 0.476895 tig0001724:+30655 Msa1338210:CDS
AATAAATACCAAAAGTCCTT+GGG 0.481537 tig0001724:+31445 Msa1338210:CDS
GACAATTCGTTATCAGAAGA+TGG 0.487981 tig0001724:+30620 Msa1338210:CDS
GACAATTCAATATCAAAAGA+TGG 0.495617 tig0001724:+30293 Msa1338210:CDS
TGGAGTAATTAATGACATAT+GGG 0.497174 tig0001724:-31104 None:intergenic
AGAACTCCTGATGCTGGAAG+AGG 0.497812 tig0001724:+31609 Msa1338210:CDS
CCAGTTTAAAGGACTCAGTC+AGG 0.500631 tig0001724:+28342 Msa1338210:CDS
AACTAGACAGATAGCGACCT+TGG 0.500907 tig0001724:+29172 Msa1338210:CDS
TACGTCTGAGTTTCTCTCCA+TGG 0.503109 tig0001724:+28198 Msa1338210:CDS
TCTTGGTTCTGTAATTTCAG+TGG 0.504833 tig0001724:-31781 None:intergenic
TTTATATGAGATATGGAGCC+TGG 0.506148 tig0001724:-29767 None:intergenic
TCACGCAATTGAGAACTAAT+GGG 0.511302 tig0001724:-31290 None:intergenic
CTCTGCTGTTAAAGCTGAGA+AGG 0.511849 tig0001724:+29957 Msa1338210:CDS
AATGGCATCAAAGAAGGTTC+GGG 0.514516 tig0001724:+26571 Msa1338210:exon
TCATTTCATTATCATCATGT+TGG 0.515052 tig0001724:-27903 None:intergenic
TTTAGACATACACTCTTGAA+AGG 0.515238 tig0001724:-32425 None:intergenic
ATAATGAAATGATCTATTCA+AGG 0.518169 tig0001724:+27914 Msa1338210:CDS
CATATTGCAGGACTCCTTGA+GGG 0.518295 tig0001724:+28905 Msa1338210:CDS
AATGAATACCAAAAGTCCTT+GGG 0.519400 tig0001724:+31638 Msa1338210:CDS
AATGAATACCAAAAGTCCTT+GGG 0.519400 tig0001724:+31830 Msa1338210:CDS
TGCTCTACTAATATCAGCAA+TGG 0.520727 tig0001724:-30492 None:intergenic
GCTCTACTAATATCAGCAAT+GGG 0.521996 tig0001724:-30491 None:intergenic
TGTATAATTGATATTTATGC+TGG 0.528909 tig0001724:+32803 Msa1338210:three_prime_UTR
TGGGAAACATTCAATTTGCA+TGG 0.531354 tig0001724:+31849 Msa1338210:CDS
CAGGTTACGAAGATGCTAGA+AGG 0.533980 tig0001724:+28751 Msa1338210:intron
ATGACAAAGAACACAAAATG+TGG 0.537678 tig0001724:+32958 Msa1338210:three_prime_UTR
GAACCAAGAACTCCTGATGC+TGG 0.540413 tig0001724:+31603 Msa1338210:CDS
TTTATTCTTATGCAGATCAA+GGG 0.541163 tig0001724:+32716 Msa1338210:intron
GCTCATGGAGCTAGAGGCAG+TGG 0.548084 tig0001724:+27991 Msa1338210:CDS
GTTGACGCTGATACACTTTG+GGG 0.551189 tig0001724:-29734 None:intergenic
CAAATTCTGCAATAAAAGGA+AGG 0.551990 tig0001724:+29810 Msa1338210:CDS
TTTGAATGCTAGCAGTGAAG+TGG 0.554049 tig0001724:+30893 Msa1338210:CDS
TACTTTCCCGGAAGGGAACA+CGG 0.554357 tig0001724:-28872 None:intergenic
CGCCTGACAAACATTCAGTA+AGG 0.557288 tig0001724:-28832 None:intergenic
TGCTGATATTAGTAGAGCAT+CGG 0.563012 tig0001724:+30496 Msa1338210:CDS
TTACCATGTAAACAGTGTCT+TGG 0.564565 tig0001724:-29079 None:intergenic
GTAGCCAGCGCTGCCAAACC+CGG 0.572473 tig0001724:-28178 None:intergenic
TCAAAAGCTGCCGAAACAAG+AGG 0.573031 tig0001724:-27946 None:intergenic
TGCTTGTTGAATGTTTCCCA+AGG 0.574406 tig0001724:-31461 None:intergenic
TTTCTTCATGGAGTCTAAGG+GGG 0.580173 tig0001724:-29138 None:intergenic
AAGGGCTCTTTGGAGAGACC+GGG 0.580635 tig0001724:+28160 Msa1338210:intron
TGTAAGTTTACTTTCCCGGA+AGG 0.585542 tig0001724:-28880 None:intergenic
GTTATTGCTCATGGAGCTAG+AGG 0.588227 tig0001724:+27985 Msa1338210:CDS
TCTTCAAGCACCAAAATATG+TGG 0.588936 tig0001724:-28307 None:intergenic
TTCATGTTGAATGTTTCCCA+AGG 0.590050 tig0001724:-31654 None:intergenic
GTAAGTTTACTTTCCCGGAA+GGG 0.591065 tig0001724:-28879 None:intergenic
AGGAAAAGTAGTGATGCCTC+TGG 0.592724 tig0001724:+28771 Msa1338210:CDS
GATCAAGGGAATGATGAAGA+AGG 0.593711 tig0001724:+32730 Msa1338210:intron
TGCAAATTGAATGTTTCCCA+AGG 0.594254 tig0001724:-31846 None:intergenic
CGGGTCGTAGCCAAAATTCG+CGG 0.597824 tig0001724:+26590 Msa1338210:CDS
ATTTACTCTAGAGTTTACTT+GGG 0.599756 tig0001724:-30324 None:intergenic
GCATATTGCAGGACTCCTTG+AGG 0.599869 tig0001724:+28904 Msa1338210:CDS
CAAGCACGGTTCTGAAATGG+AGG 0.605019 tig0001724:+31478 Msa1338210:CDS
ACATGGTAAGCTTAGCATCA+CGG 0.605762 tig0001724:+29093 Msa1338210:CDS
GCGTCAACAACGAAATTACC+AGG 0.610818 tig0001724:+29749 Msa1338210:CDS
TACTGAAAATTCAAGAACTG+TGG 0.614039 tig0001724:+26628 Msa1338210:CDS
TGGGAAACATTCAACAAGCA+CGG 0.615479 tig0001724:+31464 Msa1338210:CDS
TAATGAAATGATCTATTCAA+GGG 0.617478 tig0001724:+27915 Msa1338210:CDS
GTTATTCTCAACATGACCAG+AGG 0.618655 tig0001724:-28787 None:intergenic
GCGTGCTCATAGAAGCCACA+TGG 0.618874 tig0001724:+28544 Msa1338210:CDS
AACTTTGCTAGTTCCCCTCA+AGG 0.619759 tig0001724:-28919 None:intergenic
GATTTAATAAATCGACAGCA+TGG 0.620401 tig0001724:-28276 None:intergenic
GCTGATTCAACAAAGAAAAG+CGG 0.621242 tig0001724:+29668 Msa1338210:CDS
GTGGTGCAGTCGGTATTCAG+TGG 0.621455 tig0001724:+27867 Msa1338210:intron
GATTTGTCGATAGCAGATGA+AGG 0.623788 tig0001724:+31129 Msa1338210:CDS
TGTATGCAGTTACCAGAGAA+CGG 0.631429 tig0001724:+31344 Msa1338210:CDS
TGACAAAGAACACAAAATGT+GGG 0.636244 tig0001724:+32959 Msa1338210:three_prime_UTR
CGCAATTGAGAACTAATGGG+TGG 0.654268 tig0001724:-31287 None:intergenic
ACAGTGTCTTGGCAAAACGA+TGG 0.658288 tig0001724:-29068 None:intergenic
CGTGCTCATAGAAGCCACAT+GGG 0.665446 tig0001724:+28545 Msa1338210:CDS
TACAGGTCATAACATGAACA+AGG 0.671212 tig0001724:+31229 Msa1338210:intron
ATATTGCAGGACTCCTTGAG+GGG 0.674017 tig0001724:+28906 Msa1338210:CDS
TGAAATGATCTATTCAAGGG+AGG 0.674407 tig0001724:+27918 Msa1338210:CDS
TCTGGTAACTGCATACACAA+TGG 0.677862 tig0001724:-31338 None:intergenic
AAGTTCAGCAAGACAGACAG+TGG 0.682432 tig0001724:+29550 Msa1338210:CDS
TACAACGCAGTGGCAACTGT+AGG 0.685477 tig0001724:-32829 None:intergenic
AAGTTCAGTAAGACAGAACG+TGG 0.690570 tig0001724:+29406 Msa1338210:CDS
AAGTTCAGCAATACATACAG+TGG 0.693549 tig0001724:+29598 Msa1338210:CDS
TATAGCAGTTTCTTTCTACG+AGG 0.697044 tig0001724:+28240 Msa1338210:CDS
TCTCAGCTTTAACAGCAGAG+TGG 0.715777 tig0001724:-29954 None:intergenic
GGAAATGACATACAACGCAG+TGG 0.724186 tig0001724:-32839 None:intergenic
CATGCACAATCAAACCCATG+TGG 0.760510 tig0001724:-28559 None:intergenic
AGTGGAATTTGATCCCACAG+TGG 0.794856 tig0001724:+30911 Msa1338210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATACAAATAATTTCA+TGG - tig0001724:27783-27802 None:intergenic 10.0%
!!! GTTATATTAATTTTTTTTGT+TGG + tig0001724:28067-28086 Msa1338210:intron 10.0%
!!! TCGTTATTAAATTTTAATTT+TGG + tig0001724:29015-29034 Msa1338210:intron 10.0%
!! AAATAGATAATCAAATATAA+TGG + tig0001724:30116-30135 Msa1338210:intron 10.0%
!!! TTAAATCAATAAAAGTATAT+AGG - tig0001724:31734-31753 None:intergenic 10.0%
!! TATATTCATAATATTGTTAA+TGG + tig0001724:31891-31910 Msa1338210:intron 10.0%
!!! ATATTAATTTTTTTTGTTGG+CGG + tig0001724:28070-28089 Msa1338210:intron 15.0%
!!! AGCTTTGTATATATTTTATT+AGG + tig0001724:29842-29861 Msa1338210:intron 15.0%
!!! GAATATATTTATTTTTTTGC+AGG + tig0001724:30463-30482 Msa1338210:intron 15.0%
!!! TTGTAGAATATAAATTTTTC+AGG + tig0001724:30775-30794 Msa1338210:intron 15.0%
!!! AATATTTTTTGTTGAAAAGA+AGG - tig0001724:30802-30821 None:intergenic 15.0%
!! TCTATTCATAATATTGTTAA+TGG + tig0001724:31506-31525 Msa1338210:intron 15.0%
!! TCTATTCATAATATTGTTAA+TGG + tig0001724:31506-31525 Msa1338210:intron 15.0%
!!! ATAAAAGTATATAGGTTAAA+AGG - tig0001724:31726-31745 None:intergenic 15.0%
!! AATAATAAGTAAAAACTGAA+TGG + tig0001724:32055-32074 Msa1338210:intron 15.0%
!! TCTAATAATAATTAATTGTG+AGG + tig0001724:32492-32511 Msa1338210:intron 15.0%
!!! TTATATATCTGACTTAATTT+TGG + tig0001724:32524-32543 Msa1338210:intron 15.0%
!!! TTGATTGAATTTTGTGAAAT+TGG + tig0001724:26772-26791 Msa1338210:intron 20.0%
!! TTTGTGAAATTGGAATAAAT+TGG + tig0001724:26782-26801 Msa1338210:intron 20.0%
!! TTGTGAAATTGGAATAAATT+GGG + tig0001724:26783-26802 Msa1338210:intron 20.0%
!!! CTGAAACTCATTTTTTTTAA+TGG - tig0001724:26847-26866 None:intergenic 20.0%
!!! TTGTGAAAATTTTGAGTTTT+AGG + tig0001724:26959-26978 Msa1338210:intron 20.0%
!!! TGTGAAAATTTTGAGTTTTA+GGG + tig0001724:26960-26979 Msa1338210:intron 20.0%
!!! GTGATTTTCATAATTAGATA+TGG + tig0001724:27007-27026 Msa1338210:intron 20.0%
!! TGATTTGAATTATGTGAAAT+TGG + tig0001724:27053-27072 Msa1338210:intron 20.0%
!! AAAATAAGCTTAGTGAAATT+GGG + tig0001724:27088-27107 Msa1338210:intron 20.0%
!!! ATAGTGAAATTTGAGTTTTA+GGG + tig0001724:27281-27300 Msa1338210:intron 20.0%
!! GAATGAGATATTATTGTAAT+TGG + tig0001724:27450-27469 Msa1338210:intron 20.0%
!! ATTGTAATTGGAAAAAATTG+AGG + tig0001724:27462-27481 Msa1338210:intron 20.0%
!! ATAATGAAATGATCTATTCA+AGG + tig0001724:27914-27933 Msa1338210:CDS 20.0%
!! TAATGAAATGATCTATTCAA+GGG + tig0001724:27915-27934 Msa1338210:CDS 20.0%
!!! ACAATTATTTTGTTCTGAAA+GGG + tig0001724:28142-28161 Msa1338210:intron 20.0%
!!! ATTTTCCTTTATATGAGATA+TGG - tig0001724:29777-29796 None:intergenic 20.0%
!! ATATCTCATATAAAGGAAAA+TGG + tig0001724:29776-29795 Msa1338210:CDS 20.0%
!!! ACTCTTAATAGTTTTTATAC+TGG + tig0001724:29869-29888 Msa1338210:intron 20.0%
!! TTGTCATTAAAAATCATAAG+TGG - tig0001724:30556-30575 None:intergenic 20.0%
!! AAAACTTTAGCATGTTATAT+TGG + tig0001724:31007-31026 Msa1338210:intron 20.0%
!!! TTTTTTTCTTGAAAATTGAC+AGG + tig0001724:32242-32261 Msa1338210:intron 20.0%
!!! TTTTTTCTTGAAAATTGACA+GGG + tig0001724:32243-32262 Msa1338210:intron 20.0%
!! AGAGTCAACTTAATATTAAA+AGG - tig0001724:32304-32323 None:intergenic 20.0%
!!! TTGACTGAACTTTTTATTTT+AGG + tig0001724:32346-32365 Msa1338210:intron 20.0%
!!! TGACTGAACTTTTTATTTTA+GGG + tig0001724:32347-32366 Msa1338210:intron 20.0%
!!! AACTTTTTATTTTAGGGAAT+TGG + tig0001724:32353-32372 Msa1338210:intron 20.0%
!! AAAAATAGTGTAATCTTGAA+CGG - tig0001724:32469-32488 None:intergenic 20.0%
!! TTTATTATTGGATTTACTCA+TGG - tig0001724:32675-32694 None:intergenic 20.0%
!! AGTTACACATCATTTATTAT+TGG - tig0001724:32687-32706 None:intergenic 20.0%
!!! AGCTTTTCAATTAGTTTTAA+TGG + tig0001724:32762-32781 Msa1338210:exon 20.0%
!! TGTATAATTGATATTTATGC+TGG + tig0001724:32803-32822 Msa1338210:three_prime_UTR 20.0%
!! TAATGAATTACAGATACATA+TGG - tig0001724:32863-32882 None:intergenic 20.0%
!! GTATGATGAAATTCATATAT+TGG + tig0001724:32931-32950 Msa1338210:three_prime_UTR 20.0%
!! TACTACTATTTATAAGCAAT+TGG + tig0001724:33003-33022 Msa1338210:three_prime_UTR 20.0%
!! AGATTTCGAAATCCTTTTAA+CGG + tig0001724:26446-26465 Msa1338210:five_prime_UTR 25.0%
! ATAGAAGGAAAGAAAAATAG+AGG - tig0001724:26488-26507 None:intergenic 25.0%
! TTTGATGCCATTGAAAATTA+GGG - tig0001724:26563-26582 None:intergenic 25.0%
!!! ATTGGGAAAATTTGAGTTTT+AGG + tig0001724:26800-26819 Msa1338210:intron 25.0%
!!! TTGGGAAAATTTGAGTTTTA+GGG + tig0001724:26801-26820 Msa1338210:intron 25.0%
!! ATTAGTTAAATTTGAGTTCC+AGG + tig0001724:26884-26903 Msa1338210:intron 25.0%
!! TTAGTTAAATTTGAGTTCCA+GGG + tig0001724:26885-26904 Msa1338210:intron 25.0%
! GAAATTGTAGTAACGATAAT+TGG + tig0001724:26929-26948 Msa1338210:intron 25.0%
! GAAAATAAGCTTAGTGAAAT+TGG + tig0001724:27087-27106 Msa1338210:intron 25.0%
!!! CATAGTGAAATTTGAGTTTT+AGG + tig0001724:27280-27299 Msa1338210:intron 25.0%
! AATTGGAAAAAATTGAGGAA+TGG + tig0001724:27467-27486 Msa1338210:intron 25.0%
! AAAAATTGAGGAATGGTAAT+TGG + tig0001724:27474-27493 Msa1338210:intron 25.0%
!!! TGTTGTTTTAAATAGGGTTA+CGG + tig0001724:27817-27836 Msa1338210:intron 25.0%
! TCATTTCATTATCATCATGT+TGG - tig0001724:27906-27925 None:intergenic 25.0%
!! ATAGAAATGTTTTTCACAAG+AGG - tig0001724:28104-28123 None:intergenic 25.0%
!!! GACAATTATTTTGTTCTGAA+AGG + tig0001724:28141-28160 Msa1338210:intron 25.0%
! CAGGTAAAAATTATTGTAGT+TGG + tig0001724:28361-28380 Msa1338210:intron 25.0%
!! CAAAATGAATTTTGTGGATA+TGG + tig0001724:28619-28638 Msa1338210:CDS 25.0%
!!! CGCTATTATTATTTTTTTCC+TGG + tig0001724:28678-28697 Msa1338210:intron 25.0%
!! AGTATTGCACTTTTATTATC+AGG + tig0001724:28732-28751 Msa1338210:intron 25.0%
!! ATTTTTCTTTGTGGAATCTA+AGG - tig0001724:29240-29259 None:intergenic 25.0%
!!! TATTTTCTTTGAAGAATCTG+AGG - tig0001724:29432-29451 None:intergenic 25.0%
!!! AGTTTTTTTTGTTGAATCTG+AGG - tig0001724:29576-29595 None:intergenic 25.0%
!! ATAGTTTTTATACTGGTATC+TGG + tig0001724:29876-29895 Msa1338210:intron 25.0%
!!! TTTTTCTGTCTGTTTTAATG+AGG + tig0001724:30024-30043 Msa1338210:intron 25.0%
! AATTGTAAAGCTTAATCAAC+TGG + tig0001724:30256-30275 Msa1338210:intron 25.0%
! GACAATTCAATATCAAAAGA+TGG + tig0001724:30293-30312 Msa1338210:CDS 25.0%
!!! ATTTACTCTAGAGTTTACTT+GGG - tig0001724:30327-30346 None:intergenic 25.0%
!!! TATTTACTCTAGAGTTTACT+TGG - tig0001724:30328-30347 None:intergenic 25.0%
!!! AGTAAACTCTAGAGTAAATA+AGG + tig0001724:30328-30347 Msa1338210:CDS 25.0%
!! TTTAGTCATGTTAGGATTTT+AGG - tig0001724:30364-30383 None:intergenic 25.0%
!!! TCAGACAAAATGTTTTAACT+TGG - tig0001724:30827-30846 None:intergenic 25.0%
! TAATAAATATTTGTGTACGC+AGG + tig0001724:30860-30879 Msa1338210:intron 25.0%
! TGGAGTAATTAATGACATAT+GGG - tig0001724:31107-31126 None:intergenic 25.0%
! TTGGAGTAATTAATGACATA+TGG - tig0001724:31108-31127 None:intergenic 25.0%
!! ATTTATTACATCTCGTCTTT+TGG - tig0001724:31432-31451 None:intergenic 25.0%
! TAATAAATACCAAAAGTCCT+TGG + tig0001724:31444-31463 Msa1338210:CDS 25.0%
! AATAAATACCAAAAGTCCTT+GGG + tig0001724:31445-31464 Msa1338210:CDS 25.0%
!! CAATAAAAGTATACGTTAGA+AGG - tig0001724:31918-31937 None:intergenic 25.0%
! GGATGAATTAAAGAAGTTAA+AGG + tig0001724:32264-32283 Msa1338210:CDS 25.0%
!! TTTTATTCTTATGCAGATCA+AGG + tig0001724:32715-32734 Msa1338210:intron 25.0%
! TTTATTCTTATGCAGATCAA+GGG + tig0001724:32716-32735 Msa1338210:intron 25.0%
AGAAAAATAGAGGAAGAAGA+AGG - tig0001724:26478-26497 None:intergenic 30.0%
TAGAAGAGAAGGAAAATAGA+AGG - tig0001724:26503-26522 None:intergenic 30.0%
TTGAAGAGAATTAGAAGAGA+AGG - tig0001724:26514-26533 None:intergenic 30.0%
CTTTGATGCCATTGAAAATT+AGG - tig0001724:26564-26583 None:intergenic 30.0%
! ATTTTCAATGGCATCAAAGA+AGG + tig0001724:26565-26584 Msa1338210:exon 30.0%
! GTTCTTGAATTTTCAGTATC+TGG - tig0001724:26626-26645 None:intergenic 30.0%
TACTGAAAATTCAAGAACTG+TGG + tig0001724:26628-26647 Msa1338210:CDS 30.0%
AAAATTCAAGAACTGTGGAT+TGG + tig0001724:26633-26652 Msa1338210:CDS 30.0%
AAATTCAAGAACTGTGGATT+GGG + tig0001724:26634-26653 Msa1338210:CDS 30.0%
CCTAGAAGATTGTTCTTTAA+AGG - tig0001724:26699-26718 None:intergenic 30.0%
! CCTTTAAAGAACAATCTTCT+AGG + tig0001724:26696-26715 Msa1338210:CDS 30.0%
AAAGAACAATCTTCTAGGTA+TGG + tig0001724:26701-26720 Msa1338210:intron 30.0%
CATAGTGAAATTGAGTTTCA+GGG + tig0001724:27197-27216 Msa1338210:intron 30.0%
AGGAATGGTAATTGGAAAAA+GGG + tig0001724:27482-27501 Msa1338210:intron 30.0%
GAAACATCATGATGAAAACA+TGG - tig0001724:27681-27700 None:intergenic 30.0%
ATGTTTCAGATCTTTCTTTC+AGG + tig0001724:27694-27713 Msa1338210:intron 30.0%
! AGGTTTGAATAGTTTTCTTG+TGG + tig0001724:27714-27733 Msa1338210:intron 30.0%
! GGTTTGAATAGTTTTCTTGT+GGG + tig0001724:27715-27734 Msa1338210:intron 30.0%
! GTTTGAATAGTTTTCTTGTG+GGG + tig0001724:27716-27735 Msa1338210:intron 30.0%
!!! TTGCACCTGTTGTTTTAAAT+AGG + tig0001724:27810-27829 Msa1338210:intron 30.0%
!!! TGCACCTGTTGTTTTAAATA+GGG + tig0001724:27811-27830 Msa1338210:intron 30.0%
! GTAACCCTATTTAAAACAAC+AGG - tig0001724:27818-27837 None:intergenic 30.0%
TGAGTTAATGTTAATCCTTG+TGG + tig0001724:27848-27867 Msa1338210:intron 30.0%
TGGAAAAACTCACTTAATTC+AGG + tig0001724:28011-28030 Msa1338210:CDS 30.0%
!!! TTAATTTTTTTTGTTGGCGG+AGG + tig0001724:28073-28092 Msa1338210:intron 30.0%
GATTTAATAAATCGACAGCA+TGG - tig0001724:28279-28298 None:intergenic 30.0%
! AACTCAGAAATGGATTTAAC+AGG - tig0001724:28464-28483 None:intergenic 30.0%
!! TAAATTCTGGAACTCAGAAA+TGG - tig0001724:28474-28493 None:intergenic 30.0%
! ACCATTCATGCTTTCATTTT+GGG - tig0001724:28591-28610 None:intergenic 30.0%
! TGTGAGCAAAATGAATTTTG+TGG + tig0001724:28613-28632 Msa1338210:CDS 30.0%
TAAATACTTCAACAAAAGCC+AGG - tig0001724:28699-28718 None:intergenic 30.0%
! TGAACTTGCATTTTTCTTTG+TGG - tig0001724:29249-29268 None:intergenic 30.0%
ATTGTTCTTTGTGGAATCTA+AGG - tig0001724:29288-29307 None:intergenic 30.0%
!! TATTTTGTTTGACGAATCTG+TGG - tig0001724:29336-29355 None:intergenic 30.0%
! ACTTTTCTTTGTGGAATCTA+AGG - tig0001724:29384-29403 None:intergenic 30.0%
GCAACAAATTCTGCAATAAA+AGG + tig0001724:29806-29825 Msa1338210:CDS 30.0%
CAAATTCTGCAATAAAAGGA+AGG + tig0001724:29810-29829 Msa1338210:CDS 30.0%
TTTATACTGGTATCTGGTTA+TGG + tig0001724:29882-29901 Msa1338210:intron 30.0%
! GATATTGACCTTTTTCCTTT+GGG + tig0001724:29904-29923 Msa1338210:intron 30.0%
AATAATTTCCTTCAACCCAA+AGG - tig0001724:29922-29941 None:intergenic 30.0%
ATATGTATGTGTGTACTGTT+TGG + tig0001724:30164-30183 Msa1338210:intron 30.0%
AGAAAGCTCAATACATGAAT+CGG + tig0001724:30583-30602 Msa1338210:intron 30.0%
!! ACTAAACTCTAGAGTTGAAA+AGG + tig0001724:30655-30674 Msa1338210:CDS 30.0%
!!! GAAGACATTTTTTTTTGTCC+AGG - tig0001724:30718-30737 None:intergenic 30.0%
! AACATTTTGTCTGATCAGTT+AGG + tig0001724:30833-30852 Msa1338210:intron 30.0%
! CTAGAAGTTTTCAGAGTAAA+AGG - tig0001724:30986-31005 None:intergenic 30.0%
GGAGACACAATAAAAATAGT+TGG - tig0001724:31059-31078 None:intergenic 30.0%
!!! ACTATTTTTATTGTGTCTCC+AGG + tig0001724:31059-31078 Msa1338210:intron 30.0%
CACATGATGCGTATTTATAT+AGG + tig0001724:31193-31212 Msa1338210:intron 30.0%
TGAAAGTAAACGTTAGAAGA+AGG - tig0001724:31533-31552 None:intergenic 30.0%
TAATGAATACCAAAAGTCCT+TGG + tig0001724:31637-31656 Msa1338210:CDS 30.0%
AATGAATACCAAAAGTCCTT+GGG + tig0001724:31638-31657 Msa1338210:CDS 30.0%
TAATGAATACCAAAAGTCCT+TGG + tig0001724:31637-31656 Msa1338210:CDS 30.0%
AATGAATACCAAAAGTCCTT+GGG + tig0001724:31638-31657 Msa1338210:CDS 30.0%
ATTGCAGAATTCTCTTGTTA+AGG + tig0001724:31960-31979 Msa1338210:intron 30.0%
! CAGCTGTGTTTAAAATTCTA+AGG - tig0001724:31990-32009 None:intergenic 30.0%
TTGCTTTCATGTTAACTACA+TGG - tig0001724:32101-32120 None:intergenic 30.0%
AAAGAAGTGAGATTTCTCAT+AGG - tig0001724:32201-32220 None:intergenic 30.0%
TTTAGACATACACTCTTGAA+AGG - tig0001724:32428-32447 None:intergenic 30.0%
! TTAACAGCTTGATGATTTGA+AGG + tig0001724:32567-32586 Msa1338210:intron 30.0%
ATGACAAAGAACACAAAATG+TGG + tig0001724:32958-32977 Msa1338210:three_prime_UTR 30.0%
TGACAAAGAACACAAAATGT+GGG + tig0001724:32959-32978 Msa1338210:three_prime_UTR 30.0%
AGAAGGAAATAGCCGTTAAA+AGG - tig0001724:26461-26480 None:intergenic 35.0%
! CACCAAACCCTAATTTTCAA+TGG + tig0001724:26553-26572 Msa1338210:exon 35.0%
TGCCATTGAAAATTAGGGTT+TGG - tig0001724:26558-26577 None:intergenic 35.0%
AGTTTCAGCTTAGTGAAGTT+GGG + tig0001724:26859-26878 Msa1338210:intron 35.0%
TTCACATAATTCACAAACCC+TGG - tig0001724:26905-26924 None:intergenic 35.0%
GCATAGTGAAATTGAGTTTC+AGG + tig0001724:27196-27215 Msa1338210:intron 35.0%
!! GATTCGTGAAACTTTGAAGT+AGG + tig0001724:27165-27184 Msa1338210:intron 35.0%
CATAGTGAAATCGAGTTTCA+GGG + tig0001724:27364-27383 Msa1338210:intron 35.0%
!!! GAGTTTCAGGGTTTTGAATT+AGG + tig0001724:27376-27395 Msa1338210:intron 35.0%
GAGGAATGGTAATTGGAAAA+AGG + tig0001724:27481-27500 Msa1338210:intron 35.0%
! GGTCTTGAATTTTGTGATGT+TGG + tig0001724:27509-27528 Msa1338210:intron 35.0%
TGAAATGATCTATTCAAGGG+AGG + tig0001724:27918-27937 Msa1338210:CDS 35.0%
AACAGTACTGTTATTGCTCA+TGG + tig0001724:27976-27995 Msa1338210:CDS 35.0%
!! TTTTCCATTTTTCTCAGCCA+TGG - tig0001724:28218-28237 None:intergenic 35.0%
TATAGCAGTTTCTTTCTACG+AGG + tig0001724:28240-28259 Msa1338210:CDS 35.0%
! TCCAGAACAACCACATATTT+TGG + tig0001724:28297-28316 Msa1338210:CDS 35.0%
ACCAAAATATGTGGTTGTTC+TGG - tig0001724:28301-28320 None:intergenic 35.0%
TCTTCAAGCACCAAAATATG+TGG - tig0001724:28310-28329 None:intergenic 35.0%
!!! ATTTTGGTGCTTGAAGATCA+CGG + tig0001724:28313-28332 Msa1338210:CDS 35.0%
ATGCAGCGATGTATAAATTC+TGG - tig0001724:28487-28506 None:intergenic 35.0%
! TCCCAAAATGAAAGCATGAA+TGG + tig0001724:28587-28606 Msa1338210:CDS 35.0%
! GACCATTCATGCTTTCATTT+TGG - tig0001724:28592-28611 None:intergenic 35.0%
! ATGAATTTTGTGGATATGGC+AGG + tig0001724:28623-28642 Msa1338210:CDS 35.0%
TAAACTTACACGCATATTGC+AGG + tig0001724:28893-28912 Msa1338210:CDS 35.0%
!!! AGTTTTGTTGGTTTCATGCT+TGG + tig0001724:28938-28957 Msa1338210:CDS 35.0%
TTACCATGTAAACAGTGTCT+TGG - tig0001724:29082-29101 None:intergenic 35.0%
! TTTTCTTCATGGAGTCTAAG+GGG - tig0001724:29142-29161 None:intergenic 35.0%
! GTTTTCTTCATGGAGTCTAA+GGG - tig0001724:29143-29162 None:intergenic 35.0%
! AGTTTTCTTCATGGAGTCTA+AGG - tig0001724:29144-29163 None:intergenic 35.0%
! TGAACTTGCAGTTTTCTTCA+TGG - tig0001724:29153-29172 None:intergenic 35.0%
! ACTTTTCTTTGTGGAATCCA+AGG - tig0001724:29192-29211 None:intergenic 35.0%
! AGAACTTGCACTTTTCTTTG+TGG - tig0001724:29201-29220 None:intergenic 35.0%
! TGAACTTGCACTTTTCTTTG+TGG - tig0001724:29393-29412 None:intergenic 35.0%
! ACTTTTCTTTGTGGAAGCAA+AGG - tig0001724:29480-29499 None:intergenic 35.0%
! TGAACTTGCACTTTTCTTTG+TGG - tig0001724:29393-29412 None:intergenic 35.0%
! AGTTTTCTTTGTGGAATCTG+AGG - tig0001724:29528-29547 None:intergenic 35.0%
! TGAACTTGCAGTTTTCTTTG+TGG - tig0001724:29537-29556 None:intergenic 35.0%
AAGTTCAGCAATACATACAG+TGG + tig0001724:29598-29617 Msa1338210:CDS 35.0%
! GCTGATTCAACAAAGAAAAG+CGG + tig0001724:29668-29687 Msa1338210:CDS 35.0%
TTTATATGAGATATGGAGCC+TGG - tig0001724:29770-29789 None:intergenic 35.0%
AGGCTCCATATCTCATATAA+AGG + tig0001724:29769-29788 Msa1338210:CDS 35.0%
! GGATATTGACCTTTTTCCTT+TGG + tig0001724:29903-29922 Msa1338210:intron 35.0%
! ACAGTAGAGTGAGTATTTTG+AGG - tig0001724:29997-30016 None:intergenic 35.0%
TGTTTGGCATATTACTTGTG+AGG + tig0001724:30180-30199 Msa1338210:intron 35.0%
TGTCTACGTTTAGTCATGTT+AGG - tig0001724:30372-30391 None:intergenic 35.0%
AACATGACTAAACGTAGACA+TGG + tig0001724:30372-30391 Msa1338210:intron 35.0%
! CTCATTTTATCTACCTGACA+TGG + tig0001724:30403-30422 Msa1338210:intron 35.0%
GCTCTACTAATATCAGCAAT+GGG - tig0001724:30494-30513 None:intergenic 35.0%
TGCTCTACTAATATCAGCAA+TGG - tig0001724:30495-30514 None:intergenic 35.0%
TGCTGATATTAGTAGAGCAT+CGG + tig0001724:30496-30515 Msa1338210:CDS 35.0%
TGAATCGGTATATCAAATGC+AGG + tig0001724:30598-30617 Msa1338210:intron 35.0%
GACAATTCGTTATCAGAAGA+TGG + tig0001724:30620-30639 Msa1338210:CDS 35.0%
! TGAATTACCTTTTCCACTGT+GGG - tig0001724:30927-30946 None:intergenic 35.0%
! ATGAATTACCTTTTCCACTG+TGG - tig0001724:30928-30947 None:intergenic 35.0%
TATCCTCAAACGAAATAACC+TGG - tig0001724:31080-31099 None:intergenic 35.0%
ATCTGCTATCGACAAATCTT+TGG - tig0001724:31127-31146 None:intergenic 35.0%
! TAGGTGTCTTTTGTCATTAC+AGG + tig0001724:31212-31231 Msa1338210:intron 35.0%
TACAGGTCATAACATGAACA+AGG + tig0001724:31229-31248 Msa1338210:intron 35.0%
CAAGGAGAACAACAACTTAA+TGG + tig0001724:31247-31266 Msa1338210:CDS 35.0%
TCACGCAATTGAGAACTAAT+GGG - tig0001724:31293-31312 None:intergenic 35.0%
TTCACGCAATTGAGAACTAA+TGG - tig0001724:31294-31313 None:intergenic 35.0%
TTCATGTTGAATGTTTCCCA+AGG - tig0001724:31657-31676 None:intergenic 35.0%
TGGGAAACATTCAACATGAA+TGG + tig0001724:31657-31676 Msa1338210:CDS 35.0%
ACATTCAACATGAATGGTTC+TGG + tig0001724:31663-31682 Msa1338210:CDS 35.0%
!! TCTTGGTTCTGTAATTTCAG+TGG - tig0001724:31592-31611 None:intergenic 35.0%
TGCAAATTGAATGTTTCCCA+AGG - tig0001724:31849-31868 None:intergenic 35.0%
TGGGAAACATTCAATTTGCA+TGG + tig0001724:31849-31868 Msa1338210:CDS 35.0%
ACATTCAATTTGCATGGTTC+TGG + tig0001724:31855-31874 Msa1338210:CDS 35.0%
AAACACAGCTGAAAAGTAAG+TGG + tig0001724:31999-32018 Msa1338210:intron 35.0%
TTCACGAAGCTCAAGTATAT+AGG - tig0001724:32393-32412 None:intergenic 35.0%
! CTTGATGATTTGAAGGACAT+TGG + tig0001724:32574-32593 Msa1338210:CDS 35.0%
! CATTGGACTTTCTGAAAAAC+AGG + tig0001724:32591-32610 Msa1338210:CDS 35.0%
GGACAAGAGAGAAACAAATA+AGG + tig0001724:32980-32999 Msa1338210:three_prime_UTR 35.0%
CAATGGCATCAAAGAAGGTT+CGG + tig0001724:26570-26589 Msa1338210:exon 40.0%
AATGGCATCAAAGAAGGTTC+GGG + tig0001724:26571-26590 Msa1338210:exon 40.0%
! ATCAGAAAAGCCGCGAATTT+TGG - tig0001724:26603-26622 None:intergenic 40.0%
!! AAGAACTGTGGATTGGGTTT+CGG + tig0001724:26640-26659 Msa1338210:CDS 40.0%
GAGTTTCAGCTTAGTGAAGT+TGG + tig0001724:26858-26877 Msa1338210:intron 40.0%
GCATAGTGAAATCGAGTTTC+AGG + tig0001724:27363-27382 Msa1338210:intron 40.0%
GGTAATTGGAAAAAGGGTTG+TGG + tig0001724:27488-27507 Msa1338210:intron 40.0%
!! TTTGTTCTGAAAGGGCTCTT+TGG + tig0001724:28150-28169 Msa1338210:intron 40.0%
! TTTCTACGAGGTTGATCATC+AGG + tig0001724:28252-28271 Msa1338210:CDS 40.0%
CACGGAAGAATCCAGTTTAA+AGG + tig0001724:28331-28350 Msa1338210:CDS 40.0%
TAGCGATGACTTGACATCTT+CGG - tig0001724:28663-28682 None:intergenic 40.0%
GTTATTCTCAACATGACCAG+AGG - tig0001724:28790-28809 None:intergenic 40.0%
GTAAGTTTACTTTCCCGGAA+GGG - tig0001724:28882-28901 None:intergenic 40.0%
TGTAAGTTTACTTTCCCGGA+AGG - tig0001724:28883-28902 None:intergenic 40.0%
TGCGTGTAAGTTTACTTTCC+CGG - tig0001724:28887-28906 None:intergenic 40.0%
!! GGGAACTAGCAAAGTTTTGT+TGG + tig0001724:28926-28945 Msa1338210:CDS 40.0%
TTGCCAAGACACTGTTTACA+TGG + tig0001724:29076-29095 Msa1338210:CDS 40.0%
ACATGGTAAGCTTAGCATCA+CGG + tig0001724:29093-29112 Msa1338210:CDS 40.0%
TTTCTTCATGGAGTCTAAGG+GGG - tig0001724:29141-29160 None:intergenic 40.0%
TGAGCTTGCATTGTTCTTTG+TGG - tig0001724:29297-29316 None:intergenic 40.0%
AAGTTCAGTAAGACAGAACG+TGG + tig0001724:29406-29425 Msa1338210:CDS 40.0%
! ACTTTTCTTGGTGGAATCTG+AGG - tig0001724:29624-29643 None:intergenic 40.0%
! TGAACTTGCACTTTTCTTGG+TGG - tig0001724:29633-29652 None:intergenic 40.0%
! AGCTGAACTTGCACTTTTCT+TGG - tig0001724:29636-29655 None:intergenic 40.0%
TGTTGACGCTGATACACTTT+GGG - tig0001724:29738-29757 None:intergenic 40.0%
TTGTTGACGCTGATACACTT+TGG - tig0001724:29739-29758 None:intergenic 40.0%
!!! ACCTTTTTCCTTTGGGTTGA+AGG + tig0001724:29911-29930 Msa1338210:intron 40.0%
TCCTTCAACCCAAAGGAAAA+AGG - tig0001724:29915-29934 None:intergenic 40.0%
!! CTGAGCTGGACTAGTATTTA+TGG - tig0001724:30067-30086 None:intergenic 40.0%
AGTTTGAGTACAAACTGAGC+TGG - tig0001724:30081-30100 None:intergenic 40.0%
GCTCAGTTTGTACTCAAACT+AGG + tig0001724:30081-30100 Msa1338210:intron 40.0%
TCAACTGGTGTATCAAATGC+AGG + tig0001724:30271-30290 Msa1338210:intron 40.0%
!! TAGAGCATCGGAGTCTTTAT+TGG + tig0001724:30508-30527 Msa1338210:CDS 40.0%
TTTGAATGCTAGCAGTGAAG+TGG + tig0001724:30893-30912 Msa1338210:CDS 40.0%
ATTTGATCCCACAGTGGAAA+AGG + tig0001724:30917-30936 Msa1338210:CDS 40.0%
! TCTCCAGGTTATTTCGTTTG+AGG + tig0001724:31074-31093 Msa1338210:intron 40.0%
GATTTGTCGATAGCAGATGA+AGG + tig0001724:31129-31148 Msa1338210:CDS 40.0%
TCTGGTAACTGCATACACAA+TGG - tig0001724:31341-31360 None:intergenic 40.0%
TGTATGCAGTTACCAGAGAA+CGG + tig0001724:31344-31363 Msa1338210:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG - tig0001724:31456-31475 None:intergenic 40.0%
! TGCTTGTTGAATGTTTCCCA+AGG - tig0001724:31464-31483 None:intergenic 40.0%
TGGGAAACATTCAACAAGCA+CGG + tig0001724:31464-31483 Msa1338210:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG - tig0001724:31456-31475 None:intergenic 40.0%
!! CATGAATGGTTCTGGAATGA+AGG + tig0001724:31671-31690 Msa1338210:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG - tig0001724:31456-31475 None:intergenic 40.0%
!! TTTGCATGGTTCTGGAATGA+AGG + tig0001724:31863-31882 Msa1338210:CDS 40.0%
GAAGTGAGATTTCTCATAGG+AGG - tig0001724:32198-32217 None:intergenic 40.0%
CATACACTCTTGAAAGGTTC+TGG - tig0001724:32422-32441 None:intergenic 40.0%
GATCAAGGGAATGATGAAGA+AGG + tig0001724:32730-32749 Msa1338210:intron 40.0%
GGAATGATGAAGAAGGAAGT+TGG + tig0001724:32737-32756 Msa1338210:CDS 40.0%
TCGGTGAAGACTCAAGATTC+TGG + tig0001724:26659-26678 Msa1338210:CDS 45.0%
GTTAATCCTTGTGGTGCAGT+CGG + tig0001724:27857-27876 Msa1338210:intron 45.0%
TCAAAAGCTGCCGAAACAAG+AGG - tig0001724:27949-27968 None:intergenic 45.0%
! CTTGTTTCGGCAGCTTTTGA+AGG + tig0001724:27949-27968 Msa1338210:CDS 45.0%
GTTATTGCTCATGGAGCTAG+AGG + tig0001724:27985-28004 Msa1338210:CDS 45.0%
TACGTCTGAGTTTCTCTCCA+TGG + tig0001724:28198-28217 Msa1338210:CDS 45.0%
CTCTCCATGGCTGAGAAAAA+TGG + tig0001724:28211-28230 Msa1338210:CDS 45.0%
CCTGACTGAGTCCTTTAAAC+TGG - tig0001724:28345-28364 None:intergenic 45.0%
CCAGTTTAAAGGACTCAGTC+AGG + tig0001724:28342-28361 Msa1338210:CDS 45.0%
! GTCGTTGCATTTTTGCTTGC+AGG + tig0001724:28436-28455 Msa1338210:intron 45.0%
AACAAGGCTGCACCCAAAAA+AGG + tig0001724:28515-28534 Msa1338210:CDS 45.0%
!!! GCACGCTCAATGCCTTTTTT+GGG - tig0001724:28530-28549 None:intergenic 45.0%
!!! AGCACGCTCAATGCCTTTTT+TGG - tig0001724:28531-28550 None:intergenic 45.0%
CATGCACAATCAAACCCATG+TGG - tig0001724:28562-28581 None:intergenic 45.0%
CAGGTTACGAAGATGCTAGA+AGG + tig0001724:28751-28770 Msa1338210:intron 45.0%
AGGAAAAGTAGTGATGCCTC+TGG + tig0001724:28771-28790 Msa1338210:CDS 45.0%
CGCCTTACTGAATGTTTGTC+AGG + tig0001724:28830-28849 Msa1338210:CDS 45.0%
CGCCTGACAAACATTCAGTA+AGG - tig0001724:28835-28854 None:intergenic 45.0%
CATATTGCAGGACTCCTTGA+GGG + tig0001724:28905-28924 Msa1338210:CDS 45.0%
ATATTGCAGGACTCCTTGAG+GGG + tig0001724:28906-28925 Msa1338210:CDS 45.0%
AACTTTGCTAGTTCCCCTCA+AGG - tig0001724:28922-28941 None:intergenic 45.0%
ACAGTGTCTTGGCAAAACGA+TGG - tig0001724:29071-29090 None:intergenic 45.0%
AACTAGACAGATAGCGACCT+TGG + tig0001724:29172-29191 Msa1338210:CDS 45.0%
AAGTTCAGCAAGACAGACAG+TGG + tig0001724:29550-29569 Msa1338210:CDS 45.0%
GTTGACGCTGATACACTTTG+GGG - tig0001724:29737-29756 None:intergenic 45.0%
GCGTCAACAACGAAATTACC+AGG + tig0001724:29749-29768 Msa1338210:CDS 45.0%
! TCTCAGCTTTAACAGCAGAG+TGG - tig0001724:29957-29976 None:intergenic 45.0%
CTCTGCTGTTAAAGCTGAGA+AGG + tig0001724:29957-29976 Msa1338210:CDS 45.0%
ATCCCAAGATGAACACAACC+TGG + tig0001724:30697-30716 Msa1338210:intron 45.0%
GTCCAGGTTGTGTTCATCTT+GGG - tig0001724:30702-30721 None:intergenic 45.0%
TGTCCAGGTTGTGTTCATCT+TGG - tig0001724:30703-30722 None:intergenic 45.0%
AGTGGAATTTGATCCCACAG+TGG + tig0001724:30911-30930 Msa1338210:CDS 45.0%
CGCAATTGAGAACTAATGGG+TGG - tig0001724:31290-31309 None:intergenic 45.0%
TGTGAAATGCATCCGTTCTC+TGG - tig0001724:31359-31378 None:intergenic 45.0%
!! CAACAAGCACGGTTCTGAAA+TGG + tig0001724:31475-31494 Msa1338210:CDS 45.0%
GAACCAAGAACTCCTGATAC+TGG + tig0001724:31795-31814 Msa1338210:CDS 45.0%
CTTCCAGTATCAGGAGTTCT+TGG - tig0001724:31801-31820 None:intergenic 45.0%
ACATCTCGTCTTCCAGTATC+AGG - tig0001724:31810-31829 None:intergenic 45.0%
GGAAATGACATACAACGCAG+TGG - tig0001724:32842-32861 None:intergenic 45.0%
! TGAATACCGACTGCACCACA+AGG - tig0001724:27866-27885 None:intergenic 50.0%
! GGAGGTGAAGCCTCTTGTTT+CGG + tig0001724:27936-27955 Msa1338210:CDS 50.0%
! AAAGGGCTCTTTGGAGAGAC+CGG + tig0001724:28159-28178 Msa1338210:intron 50.0%
CGCTGCATGTTCTGCAAACA+AGG + tig0001724:28499-28518 Msa1338210:CDS 50.0%
CGTGCTCATAGAAGCCACAT+GGG + tig0001724:28545-28564 Msa1338210:CDS 50.0%
CTTGACATCTTCGGTTGAGC+AGG - tig0001724:28654-28673 None:intergenic 50.0%
ATGAAAGCCGTGTTCCCTTC+CGG + tig0001724:28865-28884 Msa1338210:CDS 50.0%
TACTTTCCCGGAAGGGAACA+CGG - tig0001724:28875-28894 None:intergenic 50.0%
GCATATTGCAGGACTCCTTG+AGG + tig0001724:28904-28923 Msa1338210:CDS 50.0%
! AGCTTTAACAGCAGAGTGGC+TGG - tig0001724:29953-29972 None:intergenic 50.0%
!! CAAGCACGGTTCTGAAATGG+AGG + tig0001724:31478-31497 Msa1338210:CDS 50.0%
GAACCAAGAACTCCTGATGC+TGG + tig0001724:31603-31622 Msa1338210:CDS 50.0%
CTTCCAGCATCAGGAGTTCT+TGG - tig0001724:31609-31628 None:intergenic 50.0%
AGAACTCCTGATGCTGGAAG+AGG + tig0001724:31609-31628 Msa1338210:CDS 50.0%
ACATCTCCTCTTCCAGCATC+AGG - tig0001724:31618-31637 None:intergenic 50.0%
TACAACGCAGTGGCAACTGT+AGG - tig0001724:32832-32851 None:intergenic 50.0%
CGGGTCGTAGCCAAAATTCG+CGG + tig0001724:26590-26609 Msa1338210:CDS 55.0%
GTGGTGCAGTCGGTATTCAG+TGG + tig0001724:27867-27886 Msa1338210:intron 55.0%
! AAGGGCTCTTTGGAGAGACC+GGG + tig0001724:28160-28179 Msa1338210:intron 55.0%
! CTCTTTGGAGAGACCGGGTT+TGG + tig0001724:28165-28184 Msa1338210:CDS 55.0%
GCGTGCTCATAGAAGCCACA+TGG + tig0001724:28544-28563 Msa1338210:CDS 55.0%
TGAAAGCCGTGTTCCCTTCC+GGG + tig0001724:28866-28885 Msa1338210:CDS 55.0%
GCTCATGGAGCTAGAGGCAG+TGG + tig0001724:27991-28010 Msa1338210:CDS 60.0%
GTAGCCAGCGCTGCCAAACC+CGG - tig0001724:28181-28200 None:intergenic 65.0%
GAGACCGGGTTTGGCAGCGC+TGG + tig0001724:28174-28193 Msa1338210:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0001724 gene 26438 33037 26438 ID=Msa1338210;Name=Msa1338210
tig0001724 mRNA 26438 33037 26438 ID=Msa1338210-mRNA-1;Parent=Msa1338210;Name=Msa1338210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=134|1|1|1|1|1|20|262|899
tig0001724 exon 26438 26717 26438 ID=Msa1338210-mRNA-1:exon:1505;Parent=Msa1338210-mRNA-1
tig0001724 exon 27876 28032 27876 ID=Msa1338210-mRNA-1:exon:1506;Parent=Msa1338210-mRNA-1
tig0001724 exon 28163 28363 28163 ID=Msa1338210-mRNA-1:exon:1507;Parent=Msa1338210-mRNA-1
tig0001724 exon 28458 28644 28458 ID=Msa1338210-mRNA-1:exon:1508;Parent=Msa1338210-mRNA-1
tig0001724 exon 28754 28959 28754 ID=Msa1338210-mRNA-1:exon:1509;Parent=Msa1338210-mRNA-1
tig0001724 exon 29065 29831 29065 ID=Msa1338210-mRNA-1:exon:1510;Parent=Msa1338210-mRNA-1
tig0001724 exon 29933 29978 29933 ID=Msa1338210-mRNA-1:exon:1511;Parent=Msa1338210-mRNA-1
tig0001724 exon 30293 30349 30293 ID=Msa1338210-mRNA-1:exon:1512;Parent=Msa1338210-mRNA-1
tig0001724 exon 30485 30529 30485 ID=Msa1338210-mRNA-1:exon:1513;Parent=Msa1338210-mRNA-1
tig0001724 exon 30620 30676 30620 ID=Msa1338210-mRNA-1:exon:1514;Parent=Msa1338210-mRNA-1
tig0001724 exon 30882 30938 30882 ID=Msa1338210-mRNA-1:exon:1515;Parent=Msa1338210-mRNA-1
tig0001724 exon 31081 31150 31081 ID=Msa1338210-mRNA-1:exon:1516;Parent=Msa1338210-mRNA-1
tig0001724 exon 31234 31499 31234 ID=Msa1338210-mRNA-1:exon:1517;Parent=Msa1338210-mRNA-1
tig0001724 exon 31585 31692 31585 ID=Msa1338210-mRNA-1:exon:1518;Parent=Msa1338210-mRNA-1
tig0001724 exon 31777 31884 31777 ID=Msa1338210-mRNA-1:exon:1519;Parent=Msa1338210-mRNA-1
tig0001724 exon 31967 32013 31967 ID=Msa1338210-mRNA-1:exon:1520;Parent=Msa1338210-mRNA-1
tig0001724 exon 32264 32285 32264 ID=Msa1338210-mRNA-1:exon:1521;Parent=Msa1338210-mRNA-1
tig0001724 exon 32368 32436 32368 ID=Msa1338210-mRNA-1:exon:1522;Parent=Msa1338210-mRNA-1
tig0001724 exon 32574 32612 32574 ID=Msa1338210-mRNA-1:exon:1523;Parent=Msa1338210-mRNA-1
tig0001724 exon 32731 33037 32731 ID=Msa1338210-mRNA-1:exon:1524;Parent=Msa1338210-mRNA-1
tig0001724 five_prime_UTR 26438 26571 26438 ID=Msa1338210-mRNA-1:five_prime_utr;Parent=Msa1338210-mRNA-1
tig0001724 CDS 26572 26717 26572 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 27876 28032 27876 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 28163 28363 28163 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 28458 28644 28458 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 28754 28959 28754 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 29065 29831 29065 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 29933 29978 29933 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 30293 30349 30293 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 30485 30529 30485 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 30620 30676 30620 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 30882 30938 30882 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 31081 31150 31081 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 31234 31499 31234 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 31585 31692 31585 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 31777 31884 31777 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 31967 32013 31967 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 32264 32285 32264 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 32368 32436 32368 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 32574 32612 32574 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 CDS 32731 32775 32731 ID=Msa1338210-mRNA-1:cds;Parent=Msa1338210-mRNA-1
tig0001724 three_prime_UTR 32776 33037 32776 ID=Msa1338210-mRNA-1:three_prime_utr;Parent=Msa1338210-mRNA-1
Gene Sequence

>Msa1338210

ATGGCATCAAAGAAGGTTCGGGTCGTAGCCAAAATTCGCGGCTTTTCTGATCCAGATACTGAAAATTCAAGAACTGTGGATTGGGTTTCGGTGAAGACTCAAGATTCTGGAGATGTTACTATCTCCTTTAAAGAACAATCTTCTAGTCGGTATTCAGTGGACTATTGCTATAACCAACATGATGATAATGAAATGATCTATTCAAGGGAGGTGAAGCCTCTTGTTTCGGCAGCTTTTGAAGGTTTTAACAGTACTGTTATTGCTCATGGAGCTAGAGGCAGTGGAAAAACTCACTTAATTCAGGGCTCTTTGGAGAGACCGGGTTTGGCAGCGCTGGCTACGTCTGAGTTTCTCTCCATGGCTGAGAAAAATGGAAAATCTATAGCAGTTTCTTTCTACGAGGTTGATCATCAGGACCATGCTGTCGATTTATTAAATCCAGAACAACCACATATTTTGGTGCTTGAAGATCACGGAAGAATCCAGTTTAAAGGACTCAGTCAGGCTCCTGTTAAATCCATTTCTGAGTTCCAGAATTTATACATCGCTGCATGTTCTGCAAACAAGGCTGCACCCAAAAAAGGCATTGAGCGTGCTCATAGAAGCCACATGGGTTTGATTGTGCATGTCTTTTCCCAAAATGAAAGCATGAATGGTCTTGTGAGCAAAATGAATTTTGTGGATATGGCAGGTTACGAAGATGCTAGAAGGAAAAGTAGTGATGCCTCTGGTCATGTTGAGAATAACAAACTTAACAAGTCAATTTACGCCTTACTGAATGTTTGTCAGGCGTTGAGTACAAATGAAAGCCGTGTTCCCTTCCGGGAAAGTAAACTTACACGCATATTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGTTGGTTTCATGCTTGAATCCATCGTTTTGCCAAGACACTGTTTACATGGTAAGCTTAGCATCACGGTCATGTCAATCGATTCATCAAACCCCCTTAGACTCCATGAAGAAAACTGCAAGTTCAACTAGACAGATAGCGACCTTGGATTCCACAAAGAAAAGTGCAAGTTCTGCAAGAGAGATAGCAACCTTAGATTCCACAAAGAAAAATGCAAGTTCAGCAAGAAAAATAGTGACCTTAGATTCCACAAAGAACAATGCAAGCTCAGTAAGACAGAACGTAGCCACAGATTCGTCAAACAAAATATCAAGCTCAGTAAGACAGACAGTAACCTTAGATTCCACAAAGAAAAGTGCAAGTTCAGTAAGACAGAACGTGGCCTCAGATTCTTCAAAGAAAATATCAAGTTCAGTAAGACAGACAGTAACCTTTGCTTCCACAAAGAAAAGTGCAAGTTCAGCAATACAGACAGTGACCTCAGATTCCACAAAGAAAACTGCAAGTTCAGCAAGACAGACAGTGGCCTCAGATTCAACAAAAAAAACTGCAAGTTCAGCAATACATACAGTGGCCTCAGATTCCACCAAGAAAAGTGCAAGTTCAGCTATACAGATAGTAGCTGATTCAACAAAGAAAAGCGGAAATTCAGCAATACTGACAGTGACTTATCGCAAAAAAAAGATACCCCAAAGTGTATCAGCGTCAACAACGAAATTACCAGGCTCCATATCTCATATAAAGGAAAATGGTGTTATTGCAACAAATTCTGCAATAAAAGGAAGGAAATTATTTGATGAAGCCAGCCACTCTGCTGTTAAAGCTGAGAAGGACAATTCAATATCAAAAGATGGAAATGACGCCCAAGTAAACTCTAGAGTAAATAAGGAAATTCCCATTGCTGATATTAGTAGAGCATCGGAGTCTTTATTGGACAATTCGTTATCAGAAGATGGAAATCACGATGAACTAAACTCTAGAGTTGAAAAGGATAACTCATCTTTGAATGCTAGCAGTGAAGTGGAATTTGATCCCACAGTGGAAAAGGTTATTTCGTTTGAGGATAAACACCCATATGTCATTAATTACTCCAAAGATTTGTCGATAGCAGATGAAGGTCATAACATGAACAAGGAGAACAACAACTTAATGGAAAATGAAGATTTTTCACCACCCATTAGTTCTCAATTGCGTGAACTTCAATCTCTCGTTTCGTCAACTCCATTGTGTATGCAGTTACCAGAGAACGGATGCATTTCACATGACGATGAGCAGATTTCTGCTAAAATTGCAGAACAAACAACTCTTGATACCAAAAGACGAGATGTAATAAATACCAAAAGTCCTTGGGAAACATTCAACAAGCACGGTTCTGAAATGGAGAATTCAACTGAAATTACAGAACCAAGAACTCCTGATGCTGGAAGAGGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACATGAATGGTTCTGGAATGAAGAAATCCACTGAAATTACAGAACCAAGAACTCCTGATACTGGAAGACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAATTTGCATGGTTCTGGAATGAAGAATTCTCTTGTTAAGGACTACCTTAGAATTTTAAACACAGCTGAAAAGGATGAATTAAAGAAGTTAAAGGGAATTGGAGAGAAGAGAGCAACCTATATACTTGAGCTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTTGATGATTTGAAGGACATTGGACTTTCTGAAAAACAGATCAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAATTAG

Protein sequence

>Msa1338210

MASKKVRVVAKIRGFSDPDTENSRTVDWVSVKTQDSGDVTISFKEQSSSRYSVDYCYNQHDDNEMIYSREVKPLVSAAFEGFNSTVIAHGARGSGKTHLIQGSLERPGLAALATSEFLSMAEKNGKSIAVSFYEVDHQDHAVDLLNPEQPHILVLEDHGRIQFKGLSQAPVKSISEFQNLYIAACSANKAAPKKGIERAHRSHMGLIVHVFSQNESMNGLVSKMNFVDMAGYEDARRKSSDASGHVENNKLNKSIYALLNVCQALSTNESRVPFRESKLTRILQDSLRGTSKVLLVSCLNPSFCQDTVYMVSLASRSCQSIHQTPLDSMKKTASSTRQIATLDSTKKSASSAREIATLDSTKKNASSARKIVTLDSTKNNASSVRQNVATDSSNKISSSVRQTVTLDSTKKSASSVRQNVASDSSKKISSSVRQTVTFASTKKSASSAIQTVTSDSTKKTASSARQTVASDSTKKTASSAIHTVASDSTKKSASSAIQIVADSTKKSGNSAILTVTYRKKKIPQSVSASTTKLPGSISHIKENGVIATNSAIKGRKLFDEASHSAVKAEKDNSISKDGNDAQVNSRVNKEIPIADISRASESLLDNSLSEDGNHDELNSRVEKDNSSLNASSEVEFDPTVEKVISFEDKHPYVINYSKDLSIADEGHNMNKENNNLMENEDFSPPISSQLRELQSLVSSTPLCMQLPENGCISHDDEQISAKIAEQTTLDTKRRDVINTKSPWETFNKHGSEMENSTEITEPRTPDAGRGDVMNTKSPWETFNMNGSGMKKSTEITEPRTPDTGRRDVMNTKSPWETFNLHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSEKQIKGMMKKEVGELFN*