AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002420.t1 MTR_2g013120 97.863 655 14 0 1 655 1 655 0.0 1324
MS.gene002420.t1 MTR_3g099190 80.892 628 114 3 31 655 27 651 0.0 1066
MS.gene002420.t1 MTR_2g027220 77.098 572 127 2 66 633 42 613 0.0 946
MS.gene002420.t1 MTR_6g004200 24.644 491 330 11 84 550 6 480 5.88e-35 140
MS.gene002420.t1 MTR_7g069540 23.034 534 361 16 63 574 28 533 6.08e-17 85.1
MS.gene002420.t1 MTR_2g009330 21.722 511 334 17 96 574 64 540 1.43e-15 80.9
MS.gene002420.t1 MTR_4g017200 22.325 542 377 17 52 574 19 535 2.36e-15 80.1
MS.gene002420.t1 MTR_5g046610 22.325 542 377 17 52 574 19 535 2.47e-15 80.1
MS.gene002420.t1 MTR_2g027200 50.000 62 12 1 555 616 1 43 5.53e-14 67.0
MS.gene002420.t1 MTR_2g015560 21.942 515 340 17 88 572 26 508 6.06e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002420.t1 AT3G48560 83.959 586 94 0 70 655 85 670 0.0 1047
MS.gene002420.t1 AT5G17380 27.328 494 309 12 84 550 14 484 9.33e-47 174
MS.gene002420.t1 AT5G01330 24.237 524 321 17 88 574 36 520 9.31e-20 94.0
MS.gene002420.t1 AT5G01320 22.562 523 331 15 88 574 47 531 1.13e-17 87.4
MS.gene002420.t1 AT4G33070 22.328 524 331 15 88 574 51 535 1.87e-16 83.6
MS.gene002420.t1 AT5G54960 22.180 532 366 16 61 572 30 533 5.57e-16 82.0

Find 213 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGGGATCAATCGAATTT+TGG 0.232600 2.4:-71327237 MS.gene002420:CDS
CCCAATATGTTGAAGTTTGC+AGG 0.240705 2.4:-71326699 MS.gene002420:CDS
GATCAACCTATTAGGTTAAC+TGG 0.252439 2.4:-71327692 MS.gene002420:CDS
AATATTTCTTTCTCATTGGC+TGG 0.252481 2.4:+71326723 None:intergenic
TTCAACAACAATATCTTAAC+AGG 0.266547 2.4:+71326825 None:intergenic
GTGTTTGGGGAAGTGGAAAA+TGG 0.269439 2.4:+71328349 None:intergenic
CGCTATGGGATTTGGATTGC+CGG 0.275397 2.4:-71326961 MS.gene002420:CDS
ACCTGCAAACTTCAACATAT+TGG 0.275568 2.4:+71326698 None:intergenic
CGAATTGGGATCAACCTATT+AGG 0.276452 2.4:-71327700 MS.gene002420:CDS
ACAGATTGTGAGGTTGTTAT+TGG 0.278604 2.4:-71327624 MS.gene002420:CDS
GGTCTTGGCGCTATGGGATT+TGG 0.283365 2.4:-71326969 MS.gene002420:CDS
AGGTTTGATGATCGGGTTAC+TGG 0.289362 2.4:-71327377 MS.gene002420:CDS
TTGAGTTTGAAGGGAGTGTT+TGG 0.289702 2.4:+71328334 None:intergenic
CCTGCAAACTTCAACATATT+GGG 0.314608 2.4:+71326699 None:intergenic
CAGGTAGGTGTGAGCTCTAT+TGG 0.318135 2.4:+71326752 None:intergenic
TGCTAGTACTTTGATGGGGT+TGG 0.322703 2.4:-71327510 MS.gene002420:CDS
AACAGGTTTCTGTTCCGAAT+TGG 0.337313 2.4:-71327715 MS.gene002420:CDS
TGTTCCAAATGTGCCTCTTT+CGG 0.341709 2.4:+71327644 None:intergenic
ATATACCCAGTTAACCTAAT+AGG 0.345011 2.4:+71327686 None:intergenic
ATTTGGATTGCCGGCTGCCA+TGG 0.358680 2.4:-71326952 MS.gene002420:CDS
GGGGAATATTTCTTTCTCAT+TGG 0.363131 2.4:+71326719 None:intergenic
GAAGGGAGTGTTTGGGGAAG+TGG 0.366408 2.4:+71328342 None:intergenic
GGCACCGAAAGAGGCACATT+TGG 0.369187 2.4:-71327648 MS.gene002420:CDS
GATCCATTTGCAGGAATCAT+TGG 0.370032 2.4:+71326549 None:intergenic
TGATTCTGAAAACGTGGTTT+TGG 0.372112 2.4:+71328377 None:intergenic
GGATTTGAAGTTGGCTTTGA+AGG 0.374802 2.4:-71327255 MS.gene002420:CDS
ACCTGTTGCTAGTACTTTGA+TGG 0.375227 2.4:-71327516 MS.gene002420:CDS
CAGCCTCATGTGTCGGTTTG+TGG 0.375821 2.4:-71327278 MS.gene002420:CDS
AAGCTTTATGATGAATGTTC+AGG 0.379274 2.4:-71326877 MS.gene002420:CDS
ACAGGTTTCTGTTCCGAATT+GGG 0.386257 2.4:-71327714 MS.gene002420:CDS
TCCTCAAAGGATCCATTTGC+AGG 0.389166 2.4:+71326540 None:intergenic
ATGTGCCTCTTTCGGTGCCT+TGG 0.389362 2.4:+71327652 None:intergenic
ACCTAAGGATATTCAGCAAC+AGG 0.392227 2.4:-71327732 MS.gene002420:CDS
GGTTAACTGGGTATATGAAT+AGG 0.392870 2.4:-71327679 MS.gene002420:CDS
TTCTGCTGGTCTTGGCGCTA+TGG 0.393331 2.4:-71326976 MS.gene002420:CDS
ACAGCAGCTCCCATGGCAGC+CGG 0.395329 2.4:+71326942 None:intergenic
GATATTGATGCTGCTGAGAT+TGG 0.396931 2.4:-71327311 MS.gene002420:CDS
TGGGGTTAGGTTTGATGATC+GGG 0.402613 2.4:-71327384 MS.gene002420:CDS
GGTGTCTGCATCGCCACTTC+CGG 0.403895 2.4:-71328010 MS.gene002420:CDS
AGAGCGGTGGTTGAGTTTGA+AGG 0.403984 2.4:+71328324 None:intergenic
GGGTTCGTTAGGGGCAAATC+GGG 0.405793 2.4:+71328228 None:intergenic
GCTAGTACTTTGATGGGGTT+GGG 0.408704 2.4:-71327509 MS.gene002420:CDS
TGGTTGACTTCTGCTGGTCT+TGG 0.411154 2.4:-71326984 MS.gene002420:CDS
ATAGAGAGTAAGCTTGATTT+CGG 0.412100 2.4:-71327203 MS.gene002420:CDS
GAGAATTCGTTGCAGATGCT+TGG 0.413491 2.4:-71327467 MS.gene002420:CDS
AACTGAATGATCAGAAAGTT+AGG 0.416856 2.4:-71327166 MS.gene002420:CDS
AGCCTCATGTGTCGGTTTGT+GGG 0.418936 2.4:-71327277 MS.gene002420:CDS
TTGGGGTTAGGTTTGATGAT+CGG 0.419793 2.4:-71327385 MS.gene002420:CDS
TGTGCCTCTTTCGGTGCCTT+GGG 0.420636 2.4:+71327653 None:intergenic
AGGCGGTTTGTTGAGTTAAC+CGG 0.420654 2.4:-71327542 MS.gene002420:CDS
GGGGTTCGTTAGGGGCAAAT+CGG 0.423916 2.4:+71328227 None:intergenic
TCCTCCGCAGTATGCTATAC+AGG 0.426227 2.4:-71327108 MS.gene002420:CDS
TGCATCGCCACTTCCGGCCC+AGG 0.426512 2.4:-71328004 MS.gene002420:CDS
CGTCGAAGCACTTGAACGTC+AGG 0.428461 2.4:-71328185 MS.gene002420:CDS
ATTTCCATTGAAGCGCCGCC+AGG 0.431656 2.4:+71328139 None:intergenic
TGAGTTTGAAGGGAGTGTTT+GGG 0.434798 2.4:+71328335 None:intergenic
CCATCACCGGTCAGGTTCCC+CGG 0.439113 2.4:-71327922 MS.gene002420:CDS
TCTTATTGCCATCACCGGTC+AGG 0.440205 2.4:-71327930 MS.gene002420:CDS
TCTGCTGGTCTTGGCGCTAT+GGG 0.442287 2.4:-71326975 MS.gene002420:CDS
GCTCGTTCCTCCGGTCTCCC+TGG 0.442490 2.4:-71328031 MS.gene002420:CDS
CAATAGAGCTCACACCTACC+TGG 0.446335 2.4:-71326751 MS.gene002420:CDS
TTTGGATTGCCGGCTGCCAT+GGG 0.447144 2.4:-71326951 MS.gene002420:CDS
GATTTGAAGTTGGCTTTGAA+GGG 0.448952 2.4:-71327254 MS.gene002420:CDS
TCTCATTGGCTGGGTCTCCC+AGG 0.453592 2.4:+71326733 None:intergenic
CCTGTTGCTAGTACTTTGAT+GGG 0.454512 2.4:-71327515 MS.gene002420:CDS
GTTGGGTTCCTATCCTAGTT+CGG 0.456275 2.4:-71327492 MS.gene002420:CDS
TGTTTGGGGAAGTGGAAAAT+GGG 0.456756 2.4:+71328350 None:intergenic
TGCAGGTGCTTGTGGTATAC+CGG 0.457670 2.4:-71326682 MS.gene002420:CDS
CATCAAGAAGGTAGGGGCCA+GGG 0.457929 2.4:+71326601 None:intergenic
ACATCAAGAAGGTAGGGGCC+AGG 0.461753 2.4:+71326600 None:intergenic
CATCAGTACCAATCATTCTC+CGG 0.464538 2.4:+71327903 None:intergenic
TATGATGAATGTTCAGGAGT+TGG 0.465434 2.4:-71326871 MS.gene002420:CDS
CAGGTTCCCCGGAGAATGAT+TGG 0.466447 2.4:-71327911 MS.gene002420:CDS
ATCAGTACCAATCATTCTCC+GGG 0.467400 2.4:+71327904 None:intergenic
CCGGGGAACCTGACCGGTGA+TGG 0.468521 2.4:+71327922 None:intergenic
TTAGGTATATCGATCAAAAC+AGG 0.472536 2.4:+71327749 None:intergenic
AGTAGGGTTGGAGATGGAAG+CGG 0.473325 2.4:+71328291 None:intergenic
TTGCAGATGCTTGGGATGCA+TGG 0.475365 2.4:-71327458 MS.gene002420:CDS
CCCATCAAAGTACTAGCAAC+AGG 0.475566 2.4:+71327515 None:intergenic
TTACCCTGGCGGCGCTTCAA+TGG 0.476078 2.4:-71328143 MS.gene002420:CDS
AACCACAATAGCGTCGGGAT+TGG 0.482109 2.4:+71326917 None:intergenic
GTAAGCTTGATTTCGGAGGT+TGG 0.484920 2.4:-71327196 MS.gene002420:CDS
AGGCAGTGGTTGACTTCTGC+TGG 0.485926 2.4:-71326990 MS.gene002420:CDS
CTAATAGGTTGATCCCAATT+CGG 0.489964 2.4:+71327701 None:intergenic
TTCTTGACGAGCTTACCAAT+GGG 0.490237 2.4:-71327085 MS.gene002420:CDS
TTGCCAATGATTCCTGCAAA+TGG 0.490698 2.4:-71326552 MS.gene002420:CDS
GATGCAGACACCAGGGAGAC+CGG 0.491267 2.4:+71328021 None:intergenic
ATATTTCTTTCTCATTGGCT+GGG 0.491931 2.4:+71326724 None:intergenic
GAGGGTTACGCTCGTTCCTC+CGG 0.496778 2.4:-71328040 MS.gene002420:CDS
CTCTTTGTCACACGAGCTGC+CGG 0.502154 2.4:+71326663 None:intergenic
CCACCACCAACATACAAAAC+AGG 0.502296 2.4:+71327590 None:intergenic
AGTAGCACCTGGGCCGGAAG+TGG 0.502445 2.4:+71327997 None:intergenic
TCCTGCAAATGGATCCTTTG+AGG 0.504950 2.4:-71326541 MS.gene002420:CDS
AGAATTCGTTGCAGATGCTT+GGG 0.506752 2.4:-71327466 MS.gene002420:CDS
GAAGTGGCGATGCAGACACC+AGG 0.511122 2.4:+71328013 None:intergenic
GGTTTGTGGGGATTTGAAGT+TGG 0.511799 2.4:-71327264 MS.gene002420:CDS
ACCTGTTGCTGAATATCCTT+AGG 0.511983 2.4:+71327731 None:intergenic
TGACCGGTGATGGCAATAAG+AGG 0.515800 2.4:+71327932 None:intergenic
GCCCCTAACGAACCCCGAAA+AGG 0.516458 2.4:-71328220 MS.gene002420:CDS
GATCTAGTTACCTCAACAAT+CGG 0.519783 2.4:+71327866 None:intergenic
TGAATTGTAGCGAGGAATTG+AGG 0.520671 2.4:-71327562 MS.gene002420:CDS
TCAAACTTCTTATAACTCAT+CGG 0.521295 2.4:+71327140 None:intergenic
ATATTGATGCTGCTGAGATT+GGG 0.522267 2.4:-71327310 MS.gene002420:CDS
ATTGGCAACAGCAGCTCCCA+TGG 0.524757 2.4:+71326935 None:intergenic
GAGCGGTGGTTGAGTTTGAA+GGG 0.528109 2.4:+71328325 None:intergenic
TCAGGAGTTGGCTACTATCA+AGG 0.529463 2.4:-71326859 MS.gene002420:CDS
CATTCTCCGGGGAACCTGAC+CGG 0.531322 2.4:+71327916 None:intergenic
GTTCTTGACGAGCTTACCAA+TGG 0.533777 2.4:-71327086 MS.gene002420:CDS
GGGGAGGCTATCATAAGTAC+TGG 0.534253 2.4:-71327065 MS.gene002420:CDS
GCCTCATGTGTCGGTTTGTG+GGG 0.534297 2.4:-71327276 MS.gene002420:CDS
AACGCTTCATTCACTATCCT+AGG 0.535019 2.4:+71327800 None:intergenic
CTGACGAGATTAGTAGCACC+TGG 0.538331 2.4:+71327986 None:intergenic
ATTGGCTGGGTCTCCCAGGT+AGG 0.539147 2.4:+71326737 None:intergenic
TTGAAGTTTGCAGGTGCTTG+TGG 0.539914 2.4:-71326690 MS.gene002420:CDS
ACAAATGTCTTCGCTTACCC+TGG 0.542915 2.4:-71328157 MS.gene002420:CDS
ATCAAGAAGGTAGGGGCCAG+GGG 0.543925 2.4:+71326602 None:intergenic
ACAATGACATCAAGAAGGTA+GGG 0.544765 2.4:+71326594 None:intergenic
ATATCGATCAAAACAGGTCC+AGG 0.546128 2.4:+71327755 None:intergenic
TCAAGAAACTCCGATTGTTG+AGG 0.547823 2.4:-71327876 MS.gene002420:CDS
CTTGGGTATGGTTGTCCAGT+GGG 0.549540 2.4:-71326793 MS.gene002420:CDS
GTTGTTGAACAATCAACACT+TGG 0.549760 2.4:-71326811 MS.gene002420:CDS
GTTACCCAAGGCACCGAAAG+AGG 0.549898 2.4:-71327657 MS.gene002420:CDS
ATGTCAACCACAATAGCGTC+GGG 0.553806 2.4:+71326912 None:intergenic
GTTCCTCTTATTGCCATCAC+CGG 0.554774 2.4:-71327935 MS.gene002420:CDS
ATTCTCATCCGAACTAGGAT+AGG 0.554840 2.4:+71327484 None:intergenic
CACATTTGGAACAGATTGTG+AGG 0.555893 2.4:-71327634 MS.gene002420:CDS
AACGAATTCTCATCCGAACT+AGG 0.556901 2.4:+71327479 None:intergenic
GAGATTAGTAGCACCTGGGC+CGG 0.558857 2.4:+71327991 None:intergenic
AAGAACAAGATAATTATGCT+TGG 0.559558 2.4:+71327838 None:intergenic
GTTCTCCCTCGTCACGAACA+AGG 0.561545 2.4:-71328079 MS.gene002420:CDS
GGTACAAGAGACCGAGGCAG+TGG 0.562380 2.4:-71327004 MS.gene002420:CDS
TGCAGATGCTTGGGATGCAT+GGG 0.563717 2.4:-71327457 MS.gene002420:CDS
GCAGAAGTCAACCACTGCCT+CGG 0.568184 2.4:+71326993 None:intergenic
CAGAAAATGTTAGATACCCC+TGG 0.568513 2.4:-71326618 MS.gene002420:CDS
ATTTGAAGTTGGCTTTGAAG+GGG 0.570043 2.4:-71327253 MS.gene002420:CDS
CAATATGAACAATCTTCGCC+CGG 0.571633 2.4:+71327333 None:intergenic
ACTTATCCTGCCATCACCCT+CGG 0.572531 2.4:+71326509 None:intergenic
TACAATGACATCAAGAAGGT+AGG 0.574462 2.4:+71326593 None:intergenic
TCATAACCGAGGGTGATGGC+AGG 0.574956 2.4:-71326515 MS.gene002420:CDS
TGGTTGTCCAGTGGGAGGAT+CGG 0.577376 2.4:-71326785 MS.gene002420:CDS
GAGAACGTTACGAATGGCGG+TGG 0.578735 2.4:+71328096 None:intergenic
GAGTTTGAAGGGAGTGTTTG+GGG 0.580053 2.4:+71328336 None:intergenic
GAACAATCAACACTTGGGTA+TGG 0.580544 2.4:-71326805 MS.gene002420:CDS
CGGGAAATGAATTGTTCATG+TGG 0.582959 2.4:+71328247 None:intergenic
TTCCACCTTGTTCGTGACGA+GGG 0.583385 2.4:+71328074 None:intergenic
TATAGAACCGATCCTCCCAC+TGG 0.583559 2.4:+71326778 None:intergenic
TTAGCTTCTAGTGGTAGACC+TGG 0.583844 2.4:-71327773 MS.gene002420:CDS
CTCGGTTATGACATCCTCAA+AGG 0.584779 2.4:+71326527 None:intergenic
GGGTATGGTTGTCCAGTGGG+AGG 0.585047 2.4:-71326790 MS.gene002420:CDS
CGGCAGCTCGTGTGACAAAG+AGG 0.586144 2.4:-71326662 MS.gene002420:CDS
GGTTTGATGATCGGGTTACT+GGG 0.588175 2.4:-71327376 MS.gene002420:CDS
AGGTGGAATCTTCGCTGCCG+AGG 0.589265 2.4:-71328059 MS.gene002420:CDS
GAGAGTAAGCTTGATTTCGG+AGG 0.590245 2.4:-71327200 MS.gene002420:CDS
GGTGGAATCTTCGCTGCCGA+GGG 0.590540 2.4:-71328058 MS.gene002420:CDS
TTGTTGAACAATCAACACTT+GGG 0.590968 2.4:-71326810 MS.gene002420:CDS
GCTATCATAAGTACTGGTGT+TGG 0.593538 2.4:-71327059 MS.gene002420:CDS
ATTCCACCTTGTTCGTGACG+AGG 0.594157 2.4:+71328073 None:intergenic
GGGAAATGAATTGTTCATGT+GGG 0.594371 2.4:+71328248 None:intergenic
ATCAACCTATTAGGTTAACT+GGG 0.594575 2.4:-71327691 MS.gene002420:CDS
GATGTCATAACCGAGGGTGA+TGG 0.596424 2.4:-71326519 MS.gene002420:CDS
CTGCAAACTTCAACATATTG+GGG 0.597132 2.4:+71326700 None:intergenic
TGCCAATCCCGACGCTATTG+TGG 0.597385 2.4:-71326919 MS.gene002420:CDS
ACTTATGATAGCCTCCCCAT+TGG 0.598564 2.4:+71327070 None:intergenic
AATAGAGCTCACACCTACCT+GGG 0.601839 2.4:-71326750 MS.gene002420:CDS
AGAGATGGTGGTCGTGAACG+CGG 0.602156 2.4:+71328426 None:intergenic
TCGGGTTACTGGGAAGCTTG+AGG 0.605782 2.4:-71327366 MS.gene002420:CDS
CTGTTGCTAGTACTTTGATG+GGG 0.606374 2.4:-71327514 MS.gene002420:CDS
GTGGTTGACATCGATGGTGA+TGG 0.607155 2.4:-71326900 MS.gene002420:CDS
GGCAGCTCGTGTGACAAAGA+GGG 0.609397 2.4:-71326661 MS.gene002420:CDS
GAATAAGCAGCCTCATGTGT+CGG 0.610801 2.4:-71327285 MS.gene002420:CDS
TTTCCATTGAAGCGCCGCCA+GGG 0.615322 2.4:+71328140 None:intergenic
TTGATGTTGATGATATACCT+AGG 0.619737 2.4:-71327817 MS.gene002420:CDS
TTTGAGGATGTCATAACCGA+GGG 0.621237 2.4:-71326525 MS.gene002420:CDS
GATGTCAACCACAATAGCGT+CGG 0.624097 2.4:+71326911 None:intergenic
AAATGAATTGTTCATGTGGG+GGG 0.627111 2.4:+71328251 None:intergenic
GGAGGAACGAGCGTAACCCT+CGG 0.628310 2.4:+71328042 None:intergenic
TTGTGGTGAAGATGAAGAGA+TGG 0.630262 2.4:+71328411 None:intergenic
CAATGACATCAAGAAGGTAG+GGG 0.631239 2.4:+71326595 None:intergenic
GGCAACACATGCTCTTGATG+CGG 0.634193 2.4:+71326570 None:intergenic
TGACGAGCTTACCAATGGGG+AGG 0.634568 2.4:-71327081 MS.gene002420:CDS
GACTGTTTATGCTAATTATG+CGG 0.636569 2.4:-71327435 MS.gene002420:CDS
GAAATGAATTGTTCATGTGG+GGG 0.638104 2.4:+71328250 None:intergenic
GCAGACACCAGGGAGACCGG+AGG 0.638324 2.4:+71328024 None:intergenic
GGAAATGAATTGTTCATGTG+GGG 0.638369 2.4:+71328249 None:intergenic
TTTATAGGTACAAGAGACCG+AGG 0.639559 2.4:-71327010 MS.gene002420:CDS
TGGTGAAGATGAAGAGATGG+TGG 0.641124 2.4:+71328414 None:intergenic
GTGTTGGACAACATCAGATG+TGG 0.643554 2.4:-71327043 MS.gene002420:CDS
TGGTAGTTTGAATTGTAGCG+AGG 0.644126 2.4:-71327570 MS.gene002420:CDS
AGTACTAGCAACAGGTACAC+CGG 0.645359 2.4:+71327523 None:intergenic
GCGGTACAATGACATCAAGA+AGG 0.647744 2.4:+71326589 None:intergenic
GCTATTGTGGTTGACATCGA+TGG 0.649650 2.4:-71326906 MS.gene002420:CDS
ACTTGGGTATGGTTGTCCAG+TGG 0.649969 2.4:-71326794 MS.gene002420:CDS
GGTAAGTGATTCTGAAAACG+TGG 0.650896 2.4:+71328371 None:intergenic
AGGGAGAACGTTACGAATGG+CGG 0.651312 2.4:+71328093 None:intergenic
GTCGAAGCACTTGAACGTCA+GGG 0.655319 2.4:-71328184 MS.gene002420:CDS
TCCCCACAAACCGACACATG+AGG 0.664573 2.4:+71327275 None:intergenic
ACGAGGGAGAACGTTACGAA+TGG 0.666531 2.4:+71328090 None:intergenic
GGTGCTACTAATCTCGTCAG+TGG 0.668110 2.4:-71327983 MS.gene002420:CDS
ACCTGTATAGCATACTGCGG+AGG 0.674124 2.4:+71327107 None:intergenic
CTTTGAGGATGTCATAACCG+AGG 0.677141 2.4:-71326526 MS.gene002420:CDS
GTATATGAATAGGTTACCCA+AGG 0.677418 2.4:-71327669 MS.gene002420:CDS
CTCCCTCGTCACGAACAAGG+TGG 0.679621 2.4:-71328076 MS.gene002420:CDS
GACGTTCAAGTGCTTCGACG+AGG 0.680089 2.4:+71328188 None:intergenic
TGTTGGACAACATCAGATGT+GGG 0.692591 2.4:-71327042 MS.gene002420:CDS
AAGTGGCGATGCAGACACCA+GGG 0.695335 2.4:+71328014 None:intergenic
AATGTCTTCGCTTACCCTGG+CGG 0.697805 2.4:-71328154 MS.gene002420:CDS
TCTTGACGAGCTTACCAATG+GGG 0.698334 2.4:-71327084 MS.gene002420:CDS
TCAACAACAATATCTTAACA+GGG 0.698879 2.4:+71326826 None:intergenic
TGACGAGATTAGTAGCACCT+GGG 0.711329 2.4:+71327987 None:intergenic
GGAGTTGGCTACTATCAAGG+TGG 0.721822 2.4:-71326856 MS.gene002420:CDS
AGAACCTGTATAGCATACTG+CGG 0.744810 2.4:+71327104 None:intergenic
TCAGTACCAATCATTCTCCG+GGG 0.748029 2.4:+71327905 None:intergenic
ATTGTAGCGAGGAATTGAGG+CGG 0.749278 2.4:-71327559 MS.gene002420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAACAAGATAATTATGCT+TGG + chr2.4:71327116-71327135 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG + chr2.4:71327814-71327833 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG + chr2.4:71328128-71328147 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG + chr2.4:71328129-71328148 None:intergenic 25.0%
AACTGAATGATCAGAAAGTT+AGG - chr2.4:71327785-71327804 MS.gene002420:CDS 30.0%
AATATTTCTTTCTCATTGGC+TGG + chr2.4:71328231-71328250 None:intergenic 30.0%
ATAGAGAGTAAGCTTGATTT+CGG - chr2.4:71327748-71327767 MS.gene002420:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG + chr2.4:71327268-71327287 None:intergenic 30.0%
ATCAACCTATTAGGTTAACT+GGG - chr2.4:71327260-71327279 MS.gene002420:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG - chr2.4:71327516-71327535 MS.gene002420:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG + chr2.4:71327205-71327224 None:intergenic 30.0%
TTGTTGAACAATCAACACTT+GGG - chr2.4:71328141-71328160 MS.gene002420:CDS 30.0%
! AAGAAACCTGTTTTGTATGT+TGG - chr2.4:71327355-71327374 MS.gene002420:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG - chr2.4:71328074-71328093 MS.gene002420:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG + chr2.4:71328230-71328249 None:intergenic 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG - chr2.4:71327724-71327743 MS.gene002420:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG - chr2.4:71327725-71327744 MS.gene002420:CDS 30.0%
!! TTGATGTTGATGATATACCT+AGG - chr2.4:71327134-71327153 MS.gene002420:CDS 30.0%
!!! TGTTTTGATCGATATACCTA+AGG - chr2.4:71327204-71327223 MS.gene002420:CDS 30.0%
AAATGAATTGTTCATGTGGG+GGG + chr2.4:71326703-71326722 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG + chr2.4:71328360-71328379 None:intergenic 35.0%
ACAGATTGTGAGGTTGTTAT+TGG - chr2.4:71327327-71327346 MS.gene002420:CDS 35.0%
ACCTGCAAACTTCAACATAT+TGG + chr2.4:71328256-71328275 None:intergenic 35.0%
ATATTGATGCTGCTGAGATT+GGG - chr2.4:71327641-71327660 MS.gene002420:CDS 35.0%
CCTGCAAACTTCAACATATT+GGG + chr2.4:71328255-71328274 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG + chr2.4:71328254-71328273 None:intergenic 35.0%
GAAATGAATTGTTCATGTGG+GGG + chr2.4:71326704-71326723 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG - chr2.4:71327259-71327278 MS.gene002420:CDS 35.0%
GATCTAGTTACCTCAACAAT+CGG + chr2.4:71327088-71327107 None:intergenic 35.0%
GGAAATGAATTGTTCATGTG+GGG + chr2.4:71326705-71326724 None:intergenic 35.0%
GGGAAATGAATTGTTCATGT+GGG + chr2.4:71326706-71326725 None:intergenic 35.0%
GGGGAATATTTCTTTCTCAT+TGG + chr2.4:71328235-71328254 None:intergenic 35.0%
GGTTAACTGGGTATATGAAT+AGG - chr2.4:71327272-71327291 MS.gene002420:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG - chr2.4:71327282-71327301 MS.gene002420:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG - chr2.4:71328140-71328159 MS.gene002420:CDS 35.0%
TACAATGACATCAAGAAGGT+AGG + chr2.4:71328361-71328380 None:intergenic 35.0%
TATGATGAATGTTCAGGAGT+TGG - chr2.4:71328080-71328099 MS.gene002420:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG - chr2.4:71327358-71327377 MS.gene002420:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG - chr2.4:71327698-71327717 MS.gene002420:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG + chr2.4:71327253-71327272 None:intergenic 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG - chr2.4:71327697-71327716 MS.gene002420:CDS 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG - chr2.4:71327169-71327188 MS.gene002420:CDS 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG + chr2.4:71326577-71326596 None:intergenic 35.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG + chr2.4:71326560-71326579 None:intergenic 35.0%
AACAGGTTTCTGTTCCGAAT+TGG - chr2.4:71327236-71327255 MS.gene002420:CDS 40.0%
AACGAATTCTCATCCGAACT+AGG + chr2.4:71327475-71327494 None:intergenic 40.0%
AACGCTTCATTCACTATCCT+AGG + chr2.4:71327154-71327173 None:intergenic 40.0%
ACAGGTTTCTGTTCCGAATT+GGG - chr2.4:71327237-71327256 MS.gene002420:CDS 40.0%
ACCTAAGGATATTCAGCAAC+AGG - chr2.4:71327219-71327238 MS.gene002420:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG - chr2.4:71327435-71327454 MS.gene002420:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG + chr2.4:71327223-71327242 None:intergenic 40.0%
AGAACCTGTATAGCATACTG+CGG + chr2.4:71327850-71327869 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG - chr2.4:71327485-71327504 MS.gene002420:CDS 40.0%
ATATCGATCAAAACAGGTCC+AGG + chr2.4:71327199-71327218 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG + chr2.4:71327050-71327069 None:intergenic 40.0%
ATTCTCATCCGAACTAGGAT+AGG + chr2.4:71327470-71327489 None:intergenic 40.0%
CAATATGAACAATCTTCGCC+CGG + chr2.4:71327621-71327640 None:intergenic 40.0%
CAATGACATCAAGAAGGTAG+GGG + chr2.4:71328359-71328378 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG - chr2.4:71328333-71328352 MS.gene002420:CDS 40.0%
CATCAGTACCAATCATTCTC+CGG + chr2.4:71327051-71327070 None:intergenic 40.0%
CCCAATATGTTGAAGTTTGC+AGG - chr2.4:71328252-71328271 MS.gene002420:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG - chr2.4:71327436-71327455 MS.gene002420:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG - chr2.4:71327251-71327270 MS.gene002420:CDS 40.0%
CGGGAAATGAATTGTTCATG+TGG + chr2.4:71326707-71326726 None:intergenic 40.0%
CTGTTGCTAGTACTTTGATG+GGG - chr2.4:71327437-71327456 MS.gene002420:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG - chr2.4:71328146-71328165 MS.gene002420:CDS 40.0%
GATATTGATGCTGCTGAGAT+TGG - chr2.4:71327640-71327659 MS.gene002420:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG + chr2.4:71328405-71328424 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG - chr2.4:71327075-71327094 MS.gene002420:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG - chr2.4:71327389-71327408 MS.gene002420:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG - chr2.4:71327381-71327400 MS.gene002420:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG + chr2.4:71327310-71327329 None:intergenic 40.0%
TGTTGGACAACATCAGATGT+GGG - chr2.4:71327909-71327928 MS.gene002420:CDS 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG + chr2.4:71326604-71326623 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG - chr2.4:71327866-71327885 MS.gene002420:CDS 40.0%
TTGCCAATGATTCCTGCAAA+TGG - chr2.4:71328399-71328418 MS.gene002420:CDS 40.0%
TTGTGGTGAAGATGAAGAGA+TGG + chr2.4:71326543-71326562 None:intergenic 40.0%
TTTATAGGTACAAGAGACCG+AGG - chr2.4:71327941-71327960 MS.gene002420:CDS 40.0%
TTTGAGGATGTCATAACCGA+GGG - chr2.4:71328426-71328445 MS.gene002420:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG - chr2.4:71327547-71327566 MS.gene002420:CDS 40.0%
! CACATTTGGAACAGATTGTG+AGG - chr2.4:71327317-71327336 MS.gene002420:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG - chr2.4:71327714-71327733 MS.gene002420:CDS 40.0%
! GGTAAGTGATTCTGAAAACG+TGG + chr2.4:71326583-71326602 None:intergenic 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG - chr2.4:71327548-71327567 MS.gene002420:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG - chr2.4:71327549-71327568 MS.gene002420:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG - chr2.4:71327566-71327585 MS.gene002420:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG + chr2.4:71328320-71328339 None:intergenic 40.0%
!! AAGCGGAGATTTTGAAAGAG+CGG + chr2.4:71326646-71326665 None:intergenic 40.0%
!! GCTATCATAAGTACTGGTGT+TGG - chr2.4:71327892-71327911 MS.gene002420:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG - chr2.4:71327696-71327715 MS.gene002420:CDS 40.0%
!! TGAGTTTGAAGGGAGTGTTT+GGG + chr2.4:71326619-71326638 None:intergenic 40.0%
!! TTGAGTTTGAAGGGAGTGTT+TGG + chr2.4:71326620-71326639 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG + chr2.4:71326675-71326694 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG + chr2.4:71326680-71326699 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG + chr2.4:71326572-71326591 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG + chr2.4:71326679-71326698 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG + chr2.4:71326669-71326688 None:intergenic 40.0%
AATAGAGCTCACACCTACCT+GGG - chr2.4:71328201-71328220 MS.gene002420:CDS 45.0%
AATTGTTCATGTGGGGGGAT+GGG + chr2.4:71326698-71326717 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG - chr2.4:71326794-71326813 MS.gene002420:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG + chr2.4:71327884-71327903 None:intergenic 45.0%
AGTACTAGCAACAGGTACAC+CGG + chr2.4:71327431-71327450 None:intergenic 45.0%
ATGTCAACCACAATAGCGTC+GGG + chr2.4:71328042-71328061 None:intergenic 45.0%
ATTGTAGCGAGGAATTGAGG+CGG - chr2.4:71327392-71327411 MS.gene002420:CDS 45.0%
CCACCACCAACATACAAAAC+AGG + chr2.4:71327364-71327383 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG + chr2.4:71328427-71328446 None:intergenic 45.0%
GAATAAGCAGCCTCATGTGT+CGG - chr2.4:71327666-71327685 MS.gene002420:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG - chr2.4:71327484-71327503 MS.gene002420:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG - chr2.4:71327751-71327770 MS.gene002420:CDS 45.0%
GATGTCAACCACAATAGCGT+CGG + chr2.4:71328043-71328062 None:intergenic 45.0%
GCGGTACAATGACATCAAGA+AGG + chr2.4:71328365-71328384 None:intergenic 45.0%
GCTAGTACTTTGATGGGGTT+GGG - chr2.4:71327442-71327461 MS.gene002420:CDS 45.0%
GCTATTGTGGTTGACATCGA+TGG - chr2.4:71328045-71328064 MS.gene002420:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG - chr2.4:71327755-71327774 MS.gene002420:CDS 45.0%
GTGTTGGACAACATCAGATG+TGG - chr2.4:71327908-71327927 MS.gene002420:CDS 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG + chr2.4:71326605-71326624 None:intergenic 45.0%
GTTCCTCTTATTGCCATCAC+CGG - chr2.4:71327016-71327035 MS.gene002420:CDS 45.0%
GTTCTTGACGAGCTTACCAA+TGG - chr2.4:71327865-71327884 MS.gene002420:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG - chr2.4:71327459-71327478 MS.gene002420:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG - chr2.4:71328092-71328111 MS.gene002420:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG + chr2.4:71327049-71327068 None:intergenic 45.0%
TCCTCAAAGGATCCATTTGC+AGG + chr2.4:71328414-71328433 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG - chr2.4:71328410-71328429 MS.gene002420:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG - chr2.4:71327867-71327886 MS.gene002420:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG + chr2.4:71326967-71326986 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG - chr2.4:71327441-71327460 MS.gene002420:CDS 45.0%
TGGTGAAGATGAAGAGATGG+TGG + chr2.4:71326540-71326559 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG - chr2.4:71327178-71327197 MS.gene002420:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG - chr2.4:71328261-71328280 MS.gene002420:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG - chr2.4:71327574-71327593 MS.gene002420:CDS 45.0%
! CCCATCAAAGTACTAGCAAC+AGG + chr2.4:71327439-71327458 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG - chr2.4:71328425-71328444 MS.gene002420:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG - chr2.4:71327575-71327594 MS.gene002420:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG - chr2.4:71327687-71327706 MS.gene002420:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG - chr2.4:71327567-71327586 MS.gene002420:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG - chr2.4:71327409-71327428 MS.gene002420:CDS 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG - chr2.4:71327361-71327380 MS.gene002420:CDS 45.0%
!! GAGTTTGAAGGGAGTGTTTG+GGG + chr2.4:71326618-71326637 None:intergenic 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG - chr2.4:71327926-71327945 MS.gene002420:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG - chr2.4:71327554-71327573 MS.gene002420:CDS 45.0%
AATGTCTTCGCTTACCCTGG+CGG - chr2.4:71326797-71326816 MS.gene002420:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG + chr2.4:71327847-71327866 None:intergenic 50.0%
ACGAGGGAGAACGTTACGAA+TGG + chr2.4:71326864-71326883 None:intergenic 50.0%
ACTTATCCTGCCATCACCCT+CGG + chr2.4:71328445-71328464 None:intergenic 50.0%
ACTTGGGTATGGTTGTCCAG+TGG - chr2.4:71328157-71328176 MS.gene002420:CDS 50.0%
AGAGCGGTGGTTGAGTTTGA+AGG + chr2.4:71326630-71326649 None:intergenic 50.0%
AGGGAGAACGTTACGAATGG+CGG + chr2.4:71326861-71326880 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG + chr2.4:71326663-71326682 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG + chr2.4:71326881-71326900 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG - chr2.4:71328200-71328219 MS.gene002420:CDS 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG + chr2.4:71328202-71328221 None:intergenic 50.0%
CGCTATGGGATTTGGATTGC+CGG - chr2.4:71327990-71328009 MS.gene002420:CDS 50.0%
CTGACGAGATTAGTAGCACC+TGG + chr2.4:71326968-71326987 None:intergenic 50.0%
CTTGGGTATGGTTGTCCAGT+GGG - chr2.4:71328158-71328177 MS.gene002420:CDS 50.0%
GAATTGTTCATGTGGGGGGA+TGG + chr2.4:71326699-71326718 None:intergenic 50.0%
GAGCGGTGGTTGAGTTTGAA+GGG + chr2.4:71326629-71326648 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG - chr2.4:71328432-71328451 MS.gene002420:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG - chr2.4:71328095-71328114 MS.gene002420:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG + chr2.4:71328384-71328403 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG - chr2.4:71327886-71327905 MS.gene002420:CDS 50.0%
GTGGTTGACATCGATGGTGA+TGG - chr2.4:71328051-71328070 MS.gene002420:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG + chr2.4:71328176-71328195 None:intergenic 50.0%
TCCTCCGCAGTATGCTATAC+AGG - chr2.4:71327843-71327862 MS.gene002420:CDS 50.0%
TCTTATTGCCATCACCGGTC+AGG - chr2.4:71327021-71327040 MS.gene002420:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG - chr2.4:71327494-71327513 MS.gene002420:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG - chr2.4:71328269-71328288 MS.gene002420:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG + chr2.4:71326880-71326899 None:intergenic 50.0%
TTGCAGATGCTTGGGATGCA+TGG - chr2.4:71327493-71327512 MS.gene002420:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG + chr2.4:71328037-71328056 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG + chr2.4:71326746-71326765 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG + chr2.4:71326748-71326767 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG + chr2.4:71326747-71326766 None:intergenic 50.0%
! GTCGAAGCACTTGAACGTCA+GGG - chr2.4:71326767-71326786 MS.gene002420:CDS 50.0%
! TGACCGGTGATGGCAATAAG+AGG + chr2.4:71327022-71327041 None:intergenic 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG - chr2.4:71327967-71327986 MS.gene002420:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG - chr2.4:71327674-71327693 MS.gene002420:CDS 50.0%
!! CGGAGATTTTGAAAGAGCGG+TGG + chr2.4:71326643-71326662 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG - chr2.4:71326968-71326987 MS.gene002420:CDS 50.0%
AAGTGGCGATGCAGACACCA+GGG + chr2.4:71326940-71326959 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG + chr2.4:71328354-71328373 None:intergenic 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG + chr2.4:71328352-71328371 None:intergenic 55.0%
ATTGGCAACAGCAGCTCCCA+TGG + chr2.4:71328019-71328038 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG - chr2.4:71327040-71327059 MS.gene002420:CDS 55.0%
CATCAAGAAGGTAGGGGCCA+GGG + chr2.4:71328353-71328372 None:intergenic 55.0%
CTCTTTGTCACACGAGCTGC+CGG + chr2.4:71328291-71328310 None:intergenic 55.0%
GACGTTCAAGTGCTTCGACG+AGG + chr2.4:71326766-71326785 None:intergenic 55.0%
GAGAACGTTACGAATGGCGG+TGG + chr2.4:71326858-71326877 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG + chr2.4:71326963-71326982 None:intergenic 55.0%
GCAGAAGTCAACCACTGCCT+CGG + chr2.4:71327961-71327980 None:intergenic 55.0%
GGCAGCTCGTGTGACAAAGA+GGG - chr2.4:71328290-71328309 MS.gene002420:CDS 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG + chr2.4:71326727-71326746 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG + chr2.4:71326726-71326745 None:intergenic 55.0%
GGTCTTGGCGCTATGGGATT+TGG - chr2.4:71327982-71328001 MS.gene002420:CDS 55.0%
GTTCTCCCTCGTCACGAACA+AGG - chr2.4:71326872-71326891 MS.gene002420:CDS 55.0%
TCCCCACAAACCGACACATG+AGG + chr2.4:71327679-71327698 None:intergenic 55.0%
TCGGGTTACTGGGAAGCTTG+AGG - chr2.4:71327585-71327604 MS.gene002420:CDS 55.0%
TGACGAGCTTACCAATGGGG+AGG - chr2.4:71327870-71327889 MS.gene002420:CDS 55.0%
TGCCAATCCCGACGCTATTG+TGG - chr2.4:71328032-71328051 MS.gene002420:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG - chr2.4:71328166-71328185 MS.gene002420:CDS 55.0%
! AGAGATGGTGGTCGTGAACG+CGG + chr2.4:71326528-71326547 None:intergenic 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG - chr2.4:71327599-71327618 MS.gene002420:CDS 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG - chr2.4:71327961-71327980 MS.gene002420:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG - chr2.4:71327999-71328018 MS.gene002420:CDS 55.0%
! CGTCGAAGCACTTGAACGTC+AGG - chr2.4:71326766-71326785 MS.gene002420:CDS 55.0%
! GAACGCGGTTTTTGCAGCAG+TGG + chr2.4:71326513-71326532 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG - chr2.4:71327303-71327322 MS.gene002420:CDS 55.0%
! TCATAACCGAGGGTGATGGC+AGG - chr2.4:71328436-71328455 MS.gene002420:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG - chr2.4:71328000-71328019 MS.gene002420:CDS 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG + chr2.4:71327302-71327321 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG + chr2.4:71326815-71326834 None:intergenic 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG - chr2.4:71327673-71327692 MS.gene002420:CDS 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG + chr2.4:71326736-71326755 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG + chr2.4:71326612-71326631 None:intergenic 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG - chr2.4:71327675-71327694 MS.gene002420:CDS 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG + chr2.4:71326735-71326754 None:intergenic 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG - chr2.4:71327294-71327313 MS.gene002420:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG - chr2.4:71327976-71327995 MS.gene002420:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG + chr2.4:71327301-71327320 None:intergenic 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG - chr2.4:71327975-71327994 MS.gene002420:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG + chr2.4:71326814-71326833 None:intergenic 55.0%
AGGTGGAATCTTCGCTGCCG+AGG - chr2.4:71326892-71326911 MS.gene002420:CDS 60.0%
ATTGGCTGGGTCTCCCAGGT+AGG + chr2.4:71328217-71328236 None:intergenic 60.0%
CATTCTCCGGGGAACCTGAC+CGG + chr2.4:71327038-71327057 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG - chr2.4:71328289-71328308 MS.gene002420:CDS 60.0%
CTCCCTCGTCACGAACAAGG+TGG - chr2.4:71326875-71326894 MS.gene002420:CDS 60.0%
GAAGTGGCGATGCAGACACC+AGG + chr2.4:71326941-71326960 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG - chr2.4:71326911-71326930 MS.gene002420:CDS 60.0%
GATGCAGACACCAGGGAGAC+CGG + chr2.4:71326933-71326952 None:intergenic 60.0%
GCCCCTAACGAACCCCGAAA+AGG - chr2.4:71326731-71326750 MS.gene002420:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG + chr2.4:71326912-71326931 None:intergenic 60.0%
GGGTATGGTTGTCCAGTGGG+AGG - chr2.4:71328161-71328180 MS.gene002420:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG - chr2.4:71327947-71327966 MS.gene002420:CDS 60.0%
GGTGGAATCTTCGCTGCCGA+GGG - chr2.4:71326893-71326912 MS.gene002420:CDS 60.0%
GGTGTCTGCATCGCCACTTC+CGG - chr2.4:71326941-71326960 MS.gene002420:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG - chr2.4:71326808-71326827 MS.gene002420:CDS 60.0%
TTCATGTGGGGGGATGGGAG+TGG + chr2.4:71326693-71326712 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG - chr2.4:71327600-71327619 MS.gene002420:CDS 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG + chr2.4:71328221-71328240 None:intergenic 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG + chr2.4:71326737-71326756 None:intergenic 60.0%
ACAGCAGCTCCCATGGCAGC+CGG + chr2.4:71328012-71328031 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG + chr2.4:71326957-71326976 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG - chr2.4:71327029-71327048 MS.gene002420:CDS 65.0%
CCGGGGAACCTGACCGGTGA+TGG + chr2.4:71327032-71327051 None:intergenic 70.0%
GCAGACACCAGGGAGACCGG+AGG + chr2.4:71326930-71326949 None:intergenic 70.0%
GCTCGTTCCTCCGGTCTCCC+TGG - chr2.4:71326920-71326939 MS.gene002420:CDS 70.0%
TGCATCGCCACTTCCGGCCC+AGG - chr2.4:71326947-71326966 MS.gene002420:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 71326503 71328470 71326503 ID=MS.gene002420
chr2.4 mRNA 71326503 71328470 71326503 ID=MS.gene002420.t1;Parent=MS.gene002420
chr2.4 exon 71326503 71328470 71326503 ID=MS.gene002420.t1.exon1;Parent=MS.gene002420.t1
chr2.4 CDS 71326503 71328470 71326503 ID=cds.MS.gene002420.t1;Parent=MS.gene002420.t1
Gene Sequence

>MS.gene002420

ATGGCAGCCACTGCTGCAAAAACCGCGTTCACGACCACCATCTCTTCATCTTCACCACAATCACTTCCAAACCAAAACCACGTTTTCAGAATCACTTACCCATTTTCCACTTCCCCAAACACTCCCTTCAAACTCAACCACCGCTCTTTCAAAATCTCCGCTTCCATCTCCAACCCTACTCAAAAAACCACTCCCATCCCCCCACATGAACAATTCATTTCCCGATTTGCCCCTAACGAACCCCGAAAAGGCGCAGATATCCTCGTCGAAGCACTTGAACGTCAGGGAGTTACAAATGTCTTCGCTTACCCTGGCGGCGCTTCAATGGAAATTCATCAAGCACTCACGCGCTCCACCGCCATTCGTAACGTTCTCCCTCGTCACGAACAAGGTGGAATCTTCGCTGCCGAGGGTTACGCTCGTTCCTCCGGTCTCCCTGGTGTCTGCATCGCCACTTCCGGCCCAGGTGCTACTAATCTCGTCAGTGGACTTGCTGATGCTATGCTTGACAGTGTTCCTCTTATTGCCATCACCGGTCAGGTTCCCCGGAGAATGATTGGTACTGATGCTTTTCAAGAAACTCCGATTGTTGAGGTAACTAGATCAATCACCAAGCATAATTATCTTGTTCTTGATGTTGATGATATACCTAGGATAGTGAATGAAGCGTTTTTATTAGCTTCTAGTGGTAGACCTGGACCTGTTTTGATCGATATACCTAAGGATATTCAGCAACAGGTTTCTGTTCCGAATTGGGATCAACCTATTAGGTTAACTGGGTATATGAATAGGTTACCCAAGGCACCGAAAGAGGCACATTTGGAACAGATTGTGAGGTTGTTATTGGAGTCTAAGAAACCTGTTTTGTATGTTGGTGGTGGTAGTTTGAATTGTAGCGAGGAATTGAGGCGGTTTGTTGAGTTAACCGGTGTACCTGTTGCTAGTACTTTGATGGGGTTGGGTTCCTATCCTAGTTCGGATGAGAATTCGTTGCAGATGCTTGGGATGCATGGGACTGTTTATGCTAATTATGCGGTTGATAAGAGTGATCTTTTGCTTGCGTTTGGGGTTAGGTTTGATGATCGGGTTACTGGGAAGCTTGAGGCTTTTGCGAGCCGGGCGAAGATTGTTCATATTGATATTGATGCTGCTGAGATTGGGAAGAATAAGCAGCCTCATGTGTCGGTTTGTGGGGATTTGAAGTTGGCTTTGAAGGGGATCAATCGAATTTTGGAGAGTAATGGGATAGAGAGTAAGCTTGATTTCGGAGGTTGGAGAGAAGAACTGAATGATCAGAAAGTTAGGTTTCCGATGAGTTATAAGAAGTTTGATGAAGCTATTCCTCCGCAGTATGCTATACAGGTTCTTGACGAGCTTACCAATGGGGAGGCTATCATAAGTACTGGTGTTGGACAACATCAGATGTGGGCTGCTCAGTTTTATAGGTACAAGAGACCGAGGCAGTGGTTGACTTCTGCTGGTCTTGGCGCTATGGGATTTGGATTGCCGGCTGCCATGGGAGCTGCTGTTGCCAATCCCGACGCTATTGTGGTTGACATCGATGGTGATGGAAGCTTTATGATGAATGTTCAGGAGTTGGCTACTATCAAGGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACTTGGGTATGGTTGTCCAGTGGGAGGATCGGTTCTATAAAGCCAATAGAGCTCACACCTACCTGGGAGACCCAGCCAATGAGAAAGAAATATTCCCCAATATGTTGAAGTTTGCAGGTGCTTGTGGTATACCGGCAGCTCGTGTGACAAAGAGGGCAGACCTTAGAGCAGCGATTCAGAAAATGTTAGATACCCCTGGCCCCTACCTTCTTGATGTCATTGTACCGCATCAAGAGCATGTGTTGCCAATGATTCCTGCAAATGGATCCTTTGAGGATGTCATAACCGAGGGTGATGGCAGGATAAGTTACTGA
Protein sequence

>MS.gene002420.t1

MAATAAKTAFTTTISSSSPQSLPNQNHVFRITYPFSTSPNTPFKLNHRSFKISASISNPTQKTTPIPPHEQFISRFAPNEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSTAIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVNEAFLLASSGRPGPVLIDIPKDIQQQVSVPNWDQPIRLTGYMNRLPKAPKEAHLEQIVRLLLESKKPVLYVGGGSLNCSEELRRFVELTGVPVASTLMGLGSYPSSDENSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDAAEIGKNKQPHVSVCGDLKLALKGINRILESNGIESKLDFGGWREELNDQKVRFPMSYKKFDEAIPPQYAIQVLDELTNGEAIISTGVGQHQMWAAQFYRYKRPRQWLTSAGLGAMGFGLPAAMGAAVANPDAIVVDIDGDGSFMMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEKEIFPNMLKFAGACGIPAARVTKRADLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPANGSFEDVITEGDGRISY