Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070507.t1 | XP_024640313.1 | 62.7 | 656 | 166 | 8 | 2 | 593 | 55 | 695 | 2.60E-177 | 632.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070507.t1 | Q8LPS2 | 27.0 | 607 | 331 | 16 | 3 | 567 | 102 | 638 | 6.8e-09 | 63.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070507.t1 | G7KHB3 | 62.7 | 656 | 166 | 8 | 2 | 593 | 55 | 695 | 1.9e-177 | 632.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070507.t1 | MTR_5g085480 | 67.231 | 650 | 154 | 9 | 2 | 595 | 55 | 701 | 0.0 | 795 |
MS.gene070507.t1 | MTR_5g085830 | 63.141 | 624 | 187 | 10 | 2 | 591 | 94 | 708 | 0.0 | 717 |
MS.gene070507.t1 | MTR_5g085810 | 59.202 | 652 | 193 | 9 | 2 | 588 | 90 | 733 | 0.0 | 684 |
MS.gene070507.t1 | MTR_5g085480 | 66.544 | 544 | 124 | 8 | 107 | 595 | 1 | 541 | 0.0 | 651 |
MS.gene070507.t1 | MTR_2g033050 | 73.300 | 397 | 102 | 3 | 1 | 394 | 8 | 403 | 0.0 | 598 |
MS.gene070507.t1 | MTR_5g085500 | 44.201 | 457 | 167 | 10 | 225 | 593 | 7 | 463 | 1.19e-102 | 319 |
MS.gene070507.t1 | MTR_5g085490 | 72.549 | 204 | 54 | 2 | 1 | 202 | 87 | 290 | 6.88e-94 | 290 |
MS.gene070507.t1 | MTR_5g085520 | 68.182 | 198 | 61 | 2 | 1 | 196 | 1 | 198 | 3.55e-83 | 259 |
MS.gene070507.t1 | MTR_5g085440 | 49.838 | 309 | 124 | 6 | 287 | 593 | 79 | 358 | 2.21e-79 | 255 |
MS.gene070507.t1 | MTR_5g085440 | 77.027 | 74 | 17 | 0 | 1 | 74 | 83 | 156 | 9.04e-30 | 121 |
MS.gene070507.t1 | MTR_2g033045 | 65.366 | 205 | 67 | 1 | 389 | 593 | 23 | 223 | 2.20e-78 | 250 |
MS.gene070507.t1 | MTR_5g085530 | 78.082 | 73 | 15 | 1 | 198 | 269 | 1 | 73 | 3.55e-32 | 119 |
MS.gene070507.t1 | MTR_1g032100 | 24.691 | 486 | 307 | 16 | 147 | 595 | 47 | 510 | 7.27e-23 | 102 |
MS.gene070507.t1 | MTR_1g115575 | 24.111 | 506 | 343 | 14 | 100 | 573 | 66 | 562 | 9.37e-23 | 102 |
MS.gene070507.t1 | MTR_2g096190 | 23.063 | 542 | 316 | 15 | 33 | 555 | 24 | 483 | 1.55e-22 | 102 |
MS.gene070507.t1 | MTR_7g100430 | 22.703 | 555 | 341 | 17 | 33 | 569 | 65 | 549 | 1.40e-20 | 96.3 |
MS.gene070507.t1 | MTR_4g062100 | 21.343 | 581 | 322 | 17 | 33 | 571 | 28 | 515 | 1.19e-19 | 93.2 |
MS.gene070507.t1 | MTR_1g069110 | 25.587 | 383 | 237 | 9 | 226 | 563 | 53 | 432 | 2.49e-18 | 88.6 |
MS.gene070507.t1 | MTR_7g117620 | 22.924 | 554 | 320 | 19 | 33 | 562 | 40 | 510 | 3.72e-17 | 85.1 |
MS.gene070507.t1 | MTR_7g100390 | 22.693 | 401 | 258 | 9 | 161 | 540 | 88 | 457 | 1.10e-16 | 83.6 |
MS.gene070507.t1 | MTR_7g100390 | 25.524 | 286 | 172 | 8 | 6 | 276 | 14 | 273 | 7.44e-12 | 68.6 |
MS.gene070507.t1 | MTR_3g105650 | 22.938 | 388 | 269 | 7 | 164 | 532 | 8 | 384 | 5.24e-15 | 77.8 |
MS.gene070507.t1 | MTR_3g016210 | 27.027 | 259 | 163 | 8 | 150 | 385 | 1 | 256 | 8.70e-15 | 77.4 |
MS.gene070507.t1 | MTR_8g105260 | 21.645 | 462 | 289 | 15 | 145 | 573 | 86 | 507 | 9.62e-15 | 77.8 |
MS.gene070507.t1 | MTR_8g069880 | 25.641 | 312 | 207 | 7 | 160 | 457 | 6 | 306 | 1.16e-14 | 77.0 |
MS.gene070507.t1 | MTR_7g021090 | 27.301 | 326 | 188 | 14 | 154 | 457 | 4 | 302 | 3.03e-14 | 75.5 |
MS.gene070507.t1 | MTR_8g073260 | 27.019 | 322 | 205 | 10 | 161 | 465 | 11 | 319 | 3.14e-14 | 75.5 |
MS.gene070507.t1 | MTR_8g062410 | 28.346 | 254 | 160 | 7 | 150 | 387 | 1 | 248 | 3.97e-14 | 75.5 |
MS.gene070507.t1 | MTR_2g101320 | 27.273 | 220 | 143 | 6 | 196 | 404 | 145 | 358 | 2.16e-13 | 73.6 |
MS.gene070507.t1 | MTR_2g101310 | 24.889 | 225 | 145 | 5 | 196 | 405 | 145 | 360 | 3.43e-13 | 72.8 |
MS.gene070507.t1 | MTR_7g099580 | 28.500 | 200 | 131 | 6 | 150 | 339 | 1 | 198 | 6.59e-13 | 70.9 |
MS.gene070507.t1 | MTR_2g101310 | 24.889 | 225 | 145 | 5 | 196 | 405 | 145 | 360 | 9.84e-13 | 71.2 |
MS.gene070507.t1 | MTR_5g043640 | 32.468 | 154 | 92 | 4 | 219 | 370 | 50 | 193 | 2.31e-12 | 67.8 |
MS.gene070507.t1 | MTR_7g451420 | 29.843 | 191 | 119 | 5 | 208 | 387 | 60 | 246 | 2.74e-12 | 68.6 |
MS.gene070507.t1 | MTR_1g059930 | 25.926 | 243 | 161 | 5 | 164 | 391 | 15 | 253 | 2.86e-12 | 69.3 |
MS.gene070507.t1 | MTR_8g040930 | 29.534 | 193 | 120 | 5 | 208 | 387 | 10 | 199 | 8.87e-12 | 67.4 |
MS.gene070507.t1 | MTR_8g041240 | 29.534 | 193 | 120 | 5 | 208 | 387 | 10 | 199 | 8.87e-12 | 67.4 |
MS.gene070507.t1 | MTR_8g467780 | 27.807 | 187 | 105 | 5 | 208 | 372 | 62 | 240 | 1.31e-11 | 67.4 |
MS.gene070507.t1 | MTR_2g096760 | 31.138 | 167 | 99 | 5 | 196 | 351 | 18 | 179 | 2.99e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070507.t1 | AT4G03500 | 30.656 | 610 | 326 | 12 | 3 | 589 | 80 | 615 | 8.14e-73 | 245 |
MS.gene070507.t1 | AT4G03500 | 30.656 | 610 | 326 | 12 | 3 | 589 | 80 | 615 | 8.14e-73 | 245 |
MS.gene070507.t1 | AT4G03500 | 30.656 | 610 | 326 | 12 | 3 | 589 | 103 | 638 | 1.49e-72 | 245 |
MS.gene070507.t1 | AT1G03670 | 30.210 | 619 | 325 | 18 | 3 | 592 | 73 | 613 | 4.00e-70 | 238 |
MS.gene070507.t1 | AT4G03460 | 31.485 | 613 | 312 | 14 | 3 | 583 | 81 | 617 | 4.84e-68 | 233 |
MS.gene070507.t1 | AT4G03460 | 30.882 | 612 | 315 | 14 | 4 | 583 | 50 | 585 | 4.31e-65 | 224 |
MS.gene070507.t1 | AT4G03490 | 28.458 | 629 | 343 | 18 | 3 | 587 | 27 | 592 | 1.50e-58 | 206 |
MS.gene070507.t1 | AT4G03490 | 28.458 | 629 | 343 | 18 | 3 | 587 | 37 | 602 | 2.12e-58 | 206 |
MS.gene070507.t1 | AT4G03490 | 28.900 | 609 | 322 | 20 | 3 | 567 | 37 | 578 | 1.89e-55 | 200 |
MS.gene070507.t1 | AT4G03490 | 28.020 | 596 | 306 | 19 | 3 | 567 | 27 | 530 | 1.50e-50 | 185 |
MS.gene070507.t1 | AT4G03490 | 28.523 | 596 | 303 | 19 | 3 | 567 | 17 | 520 | 2.07e-50 | 185 |
MS.gene070507.t1 | AT4G03440 | 27.750 | 609 | 349 | 18 | 3 | 564 | 119 | 683 | 3.55e-50 | 185 |
MS.gene070507.t1 | AT4G03440 | 27.750 | 609 | 349 | 18 | 3 | 564 | 119 | 683 | 3.55e-50 | 185 |
MS.gene070507.t1 | AT4G03440 | 27.750 | 609 | 349 | 18 | 3 | 564 | 126 | 690 | 3.94e-50 | 185 |
MS.gene070507.t1 | AT4G03450 | 28.235 | 595 | 359 | 16 | 6 | 582 | 75 | 619 | 5.24e-45 | 169 |
MS.gene070507.t1 | AT4G03450 | 28.519 | 547 | 328 | 14 | 6 | 539 | 75 | 571 | 4.61e-44 | 166 |
MS.gene070507.t1 | AT4G03480 | 27.656 | 546 | 293 | 18 | 3 | 493 | 158 | 656 | 9.71e-39 | 151 |
MS.gene070507.t1 | AT4G03480 | 27.505 | 549 | 293 | 18 | 3 | 493 | 158 | 659 | 2.18e-38 | 150 |
MS.gene070507.t1 | AT4G14390 | 25.308 | 569 | 357 | 14 | 13 | 550 | 109 | 640 | 2.46e-35 | 142 |
MS.gene070507.t1 | AT4G14390 | 25.308 | 569 | 357 | 14 | 13 | 550 | 90 | 621 | 2.89e-35 | 141 |
MS.gene070507.t1 | AT4G03470 | 26.273 | 609 | 350 | 19 | 13 | 577 | 96 | 649 | 3.89e-35 | 141 |
MS.gene070507.t1 | AT4G14390 | 25.263 | 570 | 357 | 14 | 13 | 550 | 109 | 641 | 8.68e-35 | 140 |
MS.gene070507.t1 | AT4G14400 | 26.544 | 599 | 344 | 18 | 3 | 567 | 36 | 572 | 3.07e-33 | 135 |
MS.gene070507.t1 | AT4G14400 | 26.544 | 599 | 344 | 18 | 3 | 567 | 36 | 572 | 3.07e-33 | 135 |
MS.gene070507.t1 | AT4G14400 | 27.667 | 600 | 336 | 20 | 3 | 567 | 102 | 638 | 3.17e-33 | 135 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT4G05040 | 31.304 | 345 | 185 | 8 | 3 | 337 | 116 | 418 | 1.08e-32 | 133 |
MS.gene070507.t1 | AT5G60070 | 25.536 | 466 | 289 | 14 | 154 | 573 | 70 | 523 | 5.08e-26 | 112 |
MS.gene070507.t1 | AT4G14390 | 26.772 | 381 | 236 | 11 | 13 | 372 | 90 | 448 | 1.16e-21 | 99.4 |
MS.gene070507.t1 | AT3G12360 | 22.632 | 570 | 330 | 16 | 34 | 573 | 60 | 548 | 3.62e-20 | 94.7 |
MS.gene070507.t1 | AT3G12360 | 22.592 | 571 | 331 | 16 | 33 | 573 | 71 | 560 | 4.32e-20 | 94.7 |
MS.gene070507.t1 | AT3G09550 | 21.961 | 510 | 329 | 15 | 33 | 533 | 92 | 541 | 1.41e-19 | 93.2 |
MS.gene070507.t1 | AT3G09550 | 21.961 | 510 | 329 | 15 | 33 | 533 | 85 | 534 | 1.49e-19 | 93.2 |
MS.gene070507.t1 | AT3G09550 | 21.961 | 510 | 329 | 15 | 33 | 533 | 85 | 534 | 1.49e-19 | 93.2 |
MS.gene070507.t1 | AT2G01680 | 23.750 | 480 | 278 | 16 | 134 | 575 | 72 | 501 | 5.77e-19 | 90.9 |
MS.gene070507.t1 | AT5G02620 | 24.823 | 423 | 265 | 13 | 154 | 535 | 53 | 463 | 4.31e-18 | 88.2 |
MS.gene070507.t1 | AT5G02620 | 24.823 | 423 | 265 | 13 | 154 | 535 | 53 | 463 | 4.31e-18 | 88.2 |
MS.gene070507.t1 | AT5G02620 | 24.823 | 423 | 265 | 13 | 154 | 535 | 53 | 463 | 4.31e-18 | 88.2 |
MS.gene070507.t1 | AT1G07710 | 23.937 | 447 | 288 | 13 | 154 | 562 | 63 | 495 | 3.41e-17 | 85.5 |
MS.gene070507.t1 | AT1G07710 | 23.937 | 447 | 288 | 13 | 154 | 562 | 63 | 495 | 3.41e-17 | 85.5 |
MS.gene070507.t1 | AT1G34050 | 22.222 | 513 | 325 | 18 | 101 | 585 | 85 | 551 | 1.50e-16 | 83.6 |
MS.gene070507.t1 | AT2G31820 | 24.943 | 437 | 282 | 14 | 161 | 562 | 193 | 618 | 3.26e-16 | 82.8 |
MS.gene070507.t1 | AT5G02620 | 23.756 | 442 | 269 | 13 | 154 | 535 | 53 | 486 | 3.82e-16 | 82.0 |
MS.gene070507.t1 | AT5G02620 | 23.756 | 442 | 269 | 13 | 154 | 535 | 53 | 486 | 3.82e-16 | 82.0 |
MS.gene070507.t1 | AT5G54710 | 21.697 | 613 | 402 | 17 | 3 | 563 | 19 | 605 | 1.25e-15 | 80.9 |
MS.gene070507.t1 | AT1G14500 | 24.228 | 421 | 257 | 13 | 191 | 573 | 39 | 435 | 1.24e-13 | 73.9 |
MS.gene070507.t1 | AT5G54710 | 22.266 | 503 | 320 | 15 | 96 | 563 | 94 | 560 | 1.37e-13 | 74.3 |
MS.gene070507.t1 | AT1G05640 | 22.162 | 555 | 326 | 19 | 33 | 562 | 110 | 583 | 2.29e-13 | 73.6 |
MS.gene070507.t1 | AT2G03430 | 32.484 | 157 | 94 | 4 | 216 | 370 | 40 | 186 | 4.35e-13 | 69.7 |
MS.gene070507.t1 | AT1G10340 | 22.614 | 482 | 298 | 13 | 96 | 537 | 63 | 509 | 8.50e-13 | 71.6 |
MS.gene070507.t1 | AT1G10340 | 22.614 | 482 | 294 | 15 | 96 | 537 | 63 | 505 | 2.72e-11 | 67.0 |
MS.gene070507.t1 | AT5G51160 | 23.894 | 339 | 199 | 12 | 220 | 511 | 44 | 370 | 6.91e-11 | 65.1 |
Find 105 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCGGCTTAACATCTTTC+TGG | 0.084927 | 5.4:-67672391 | None:intergenic |
CTTTACCTTGCTGTTGAAAA+TGG | 0.104649 | 5.4:+67672329 | MS.gene070507:CDS |
GACTCTTCATCATACTCTTC+TGG | 0.146198 | 5.4:-67672089 | None:intergenic |
GTTCTATTATCCTCCTCTTT+TGG | 0.153837 | 5.4:+67677104 | MS.gene070507:CDS |
TTCATTATCTTTGGCTTTCA+TGG | 0.158618 | 5.4:+67677201 | MS.gene070507:CDS |
TTCCATCTTCGTTCCTTAAA+TGG | 0.163270 | 5.4:-67674983 | None:intergenic |
CTCTCTCATTTCATTATCTT+TGG | 0.168581 | 5.4:+67677192 | MS.gene070507:CDS |
ATGCTTCATCATTGTCAATT+TGG | 0.179466 | 5.4:-67676823 | None:intergenic |
AGCCAACTTGGATCCATTTA+AGG | 0.202008 | 5.4:+67674970 | MS.gene070507:CDS |
CAAGAGCCGTTTCATTATTC+TGG | 0.222103 | 5.4:-67675424 | None:intergenic |
CCAATTCATCTAGCATCTTA+TGG | 0.233508 | 5.4:+67675113 | MS.gene070507:CDS |
TTGGACAGGATGGTATAAAA+AGG | 0.273495 | 5.4:+67672033 | MS.gene070507:CDS |
TTAAATTTGAACAAAAGATT+TGG | 0.289445 | 5.4:-67671924 | None:intergenic |
TTAGCCAGTTATACTAATAT+TGG | 0.290809 | 5.4:+67672014 | MS.gene070507:CDS |
CTGTCCAATATTAGTATAAC+TGG | 0.295186 | 5.4:-67672018 | None:intergenic |
CCATAAGATGCTAGATGAAT+TGG | 0.297882 | 5.4:-67675113 | None:intergenic |
TCTTCATCATTGTGTTCAAT+AGG | 0.310132 | 5.4:-67676866 | None:intergenic |
TTATCTTTGGCTTTCATGGC+TGG | 0.329139 | 5.4:+67677205 | MS.gene070507:CDS |
AAAAGATTGAAACAAATAAA+AGG | 0.329594 | 5.4:+67676894 | MS.gene070507:CDS |
CAAATCGTTATGCCGCTTCT+TGG | 0.333653 | 5.4:+67677166 | MS.gene070507:CDS |
GTATGATGAAGAGTCAAATA+TGG | 0.336358 | 5.4:+67672097 | MS.gene070507:CDS |
ACAATTCAAAGGGACAAATA+TGG | 0.343812 | 5.4:+67675083 | MS.gene070507:CDS |
ACTCTTCATCATACTCTTCT+GGG | 0.351775 | 5.4:-67672088 | None:intergenic |
CTGTTATCAGTGAACTTACT+TGG | 0.359026 | 5.4:+67677236 | MS.gene070507:CDS |
CTTCATCATTGTGTTCAATA+GGG | 0.361356 | 5.4:-67676865 | None:intergenic |
TGGAGACACCCCTTTGCATT+TGG | 0.361651 | 5.4:+67675322 | MS.gene070507:CDS |
CTTCGGCTTAACATCTTTCT+GGG | 0.362716 | 5.4:-67672390 | None:intergenic |
AGGGAGTATTGCACTTGGTT+TGG | 0.368458 | 5.4:-67676846 | None:intergenic |
TTTACCTTGCTGTTGAAAAT+GGG | 0.380315 | 5.4:+67672330 | MS.gene070507:CDS |
CAAGAAGCGGCATAACGATT+TGG | 0.389915 | 5.4:-67677165 | None:intergenic |
GAGGAGGATAATAGAACTAA+TGG | 0.390704 | 5.4:-67677098 | None:intergenic |
AACACTTGGAATAACTGAAT+TGG | 0.418036 | 5.4:+67677129 | MS.gene070507:CDS |
TACAAAACTGAAGATTTGTC+TGG | 0.424015 | 5.4:+67672239 | MS.gene070507:CDS |
AGATGATAAATCAGAAAGAT+AGG | 0.425002 | 5.4:+67675297 | MS.gene070507:CDS |
AATGTTTGCAGCATCTTACA+TGG | 0.427993 | 5.4:+67676750 | MS.gene070507:intron |
GCAGCATGTTTAGCTGTTCC+AGG | 0.429250 | 5.4:+67676992 | MS.gene070507:CDS |
TAAGTGTTGAAACAATTGTA+AGG | 0.440585 | 5.4:-67676952 | None:intergenic |
TTCATGATTGCTGCTACAAC+AGG | 0.442160 | 5.4:-67672422 | None:intergenic |
ATCACTTGCAGAAGGTAAAT+CGG | 0.445679 | 5.4:+67677396 | MS.gene070507:CDS |
TCAAGCATCTCTGTGGGATC+AGG | 0.447170 | 5.4:-67675176 | None:intergenic |
GTAATAATTCAACACCTTCA+AGG | 0.447605 | 5.4:-67675040 | None:intergenic |
TACTAGAAATCAAGCCAACT+TGG | 0.451428 | 5.4:+67674958 | MS.gene070507:CDS |
AGATTTGTCTGGATACTCAT+TGG | 0.451663 | 5.4:+67672250 | MS.gene070507:CDS |
CATAAGATGCTAGATGAATT+GGG | 0.462698 | 5.4:-67675112 | None:intergenic |
CATGGAACATTGCATGATAT+AGG | 0.465600 | 5.4:-67677039 | None:intergenic |
ATCTTGCAGCCAAATGCAAA+GGG | 0.474929 | 5.4:-67675331 | None:intergenic |
ACCTCTTGCAGCAACATGTA+AGG | 0.481999 | 5.4:-67671964 | None:intergenic |
GCAAATGCTGTACAATTCAA+AGG | 0.486473 | 5.4:+67675072 | MS.gene070507:CDS |
CTTTCTGATTTATCATCTGA+CGG | 0.487010 | 5.4:-67675292 | None:intergenic |
GCATCTGTAGGTTACCTTGA+AGG | 0.492224 | 5.4:+67675026 | MS.gene070507:CDS |
TTCCAAGTGTTGCCCAAAAG+AGG | 0.497010 | 5.4:-67677117 | None:intergenic |
ATCCATTTAAGGAACGAAGA+TGG | 0.498301 | 5.4:+67674981 | MS.gene070507:CDS |
GTGACGGAGAAGAATGTTCA+AGG | 0.508947 | 5.4:+67672137 | MS.gene070507:CDS |
TTCCTTAAATGGATCCAAGT+TGG | 0.515707 | 5.4:-67674972 | None:intergenic |
CAGAAGGTAAATCGGATCAT+TGG | 0.516155 | 5.4:+67677404 | MS.gene070507:CDS |
TATCAGTGAACTTACTTGGT+TGG | 0.523227 | 5.4:+67677240 | MS.gene070507:CDS |
CTACATATTGCAGCTTGGTA+TGG | 0.527273 | 5.4:+67671864 | MS.gene070507:CDS |
CAAATGCTGTACAATTCAAA+GGG | 0.529015 | 5.4:+67675073 | MS.gene070507:CDS |
TTCTTGTTGATGATGAGGGA+AGG | 0.541567 | 5.4:-67677330 | None:intergenic |
TTCGGCTTAACATCTTTCTG+GGG | 0.545567 | 5.4:-67672389 | None:intergenic |
TGGACTGCACTTAAATCTGC+TGG | 0.547758 | 5.4:+67676770 | MS.gene070507:CDS |
GCAATCATGAAGCAGAATCA+AGG | 0.549271 | 5.4:+67672434 | MS.gene070507:CDS |
CAGTTATACTAATATTGGAC+AGG | 0.552254 | 5.4:+67672019 | MS.gene070507:CDS |
ACAACAGGCGATAATCCCTT+CGG | 0.560127 | 5.4:-67672407 | None:intergenic |
GTGACAAGAGCAATATCAGT+AGG | 0.561089 | 5.4:+67672189 | MS.gene070507:CDS |
GGACTTGTTAAAATTTGTGA+CGG | 0.563845 | 5.4:+67672121 | MS.gene070507:CDS |
CTTCATTATGCAGCATCTGT+AGG | 0.564584 | 5.4:+67675014 | MS.gene070507:CDS |
ACTAAGTAGAACACAGTCAT+GGG | 0.567710 | 5.4:-67675362 | None:intergenic |
TTACCTTGCTGTTGAAAATG+GGG | 0.569536 | 5.4:+67672331 | MS.gene070507:CDS |
ATTTAAGGAACGAAGATGGA+AGG | 0.570643 | 5.4:+67674985 | MS.gene070507:CDS |
ATAAATCAGAAAGATAGGAA+TGG | 0.570805 | 5.4:+67675302 | MS.gene070507:CDS |
GGTTAACCAGAATAATGAAA+CGG | 0.573010 | 5.4:+67675418 | MS.gene070507:CDS |
GATCTTGCAGCCAAATGCAA+AGG | 0.573294 | 5.4:-67675332 | None:intergenic |
AAGTGATGCTAGAACAAGAA+GGG | 0.574540 | 5.4:-67677380 | None:intergenic |
AACTAAGTAGAACACAGTCA+TGG | 0.578346 | 5.4:-67675363 | None:intergenic |
GTTCTAGCATCACTTGCAGA+AGG | 0.580819 | 5.4:+67677388 | MS.gene070507:CDS |
TATACTAATATTGGACAGGA+TGG | 0.580979 | 5.4:+67672023 | MS.gene070507:CDS |
CTTCACATTGCAGCAGACAA+TGG | 0.589479 | 5.4:+67675221 | MS.gene070507:CDS |
CCAGAAAGATGTTAAGCCGA+AGG | 0.591109 | 5.4:+67672391 | MS.gene070507:CDS |
CAAGTGATGCTAGAACAAGA+AGG | 0.591944 | 5.4:-67677381 | None:intergenic |
TGACAAGAGCAATATCAGTA+GGG | 0.593339 | 5.4:+67672190 | MS.gene070507:CDS |
TCGGCTTAACATCTTTCTGG+GGG | 0.594102 | 5.4:-67672388 | None:intergenic |
ACAGATGCTGCATAATGAAG+TGG | 0.596788 | 5.4:-67675011 | None:intergenic |
TGATGAAGATAATGAAGGCA+TGG | 0.603587 | 5.4:-67677057 | None:intergenic |
CAGAAAGATGTTAAGCCGAA+GGG | 0.606259 | 5.4:+67672392 | MS.gene070507:CDS |
GCCTTACATGTTGCTGCAAG+AGG | 0.610873 | 5.4:+67671963 | MS.gene070507:CDS |
CAGTGCTACATATTGCAGCT+TGG | 0.620056 | 5.4:+67671859 | MS.gene070507:CDS |
GTAATAGGAAATGTATCGCA+TGG | 0.620439 | 5.4:-67677356 | None:intergenic |
TCAATAGGGAGTATTGCACT+TGG | 0.622226 | 5.4:-67676851 | None:intergenic |
TGCTGTTGAAAATGGGGACA+AGG | 0.624792 | 5.4:+67672337 | MS.gene070507:CDS |
AGAAGTGTCAAGCATCTCTG+TGG | 0.631679 | 5.4:-67675183 | None:intergenic |
TTACATGTTGCTGCAAGAGG+TGG | 0.637643 | 5.4:+67671966 | MS.gene070507:CDS |
GCTGTTCCAGGTGAAGCACA+AGG | 0.637740 | 5.4:+67677004 | MS.gene070507:CDS |
TATTGTGATGAAGATAATGA+AGG | 0.638649 | 5.4:-67677062 | None:intergenic |
ATGAGAGAGATACCAAGAAG+CGG | 0.645046 | 5.4:-67677178 | None:intergenic |
GAAGTGTCAAGCATCTCTGT+GGG | 0.645090 | 5.4:-67675182 | None:intergenic |
AGCATCTTATGGTGGCCATG+TGG | 0.645724 | 5.4:+67675124 | MS.gene070507:CDS |
AGTGATGCTAGAACAAGAAG+GGG | 0.647780 | 5.4:-67677379 | None:intergenic |
CAAGTGTTGCCCAAAAGAGG+AGG | 0.648243 | 5.4:-67677114 | None:intergenic |
TGATGAAGAGTCAAATATGG+AGG | 0.657104 | 5.4:+67672100 | MS.gene070507:CDS |
AGGCAACACTATGTTACATG+AGG | 0.678880 | 5.4:+67672157 | MS.gene070507:CDS |
ACTTCTTCACTACTTCCACA+TGG | 0.680029 | 5.4:-67675139 | None:intergenic |
ATTCATCTAGCATCTTATGG+TGG | 0.698790 | 5.4:+67675116 | MS.gene070507:CDS |
TCTTGCAGCCAAATGCAAAG+GGG | 0.746892 | 5.4:-67675330 | None:intergenic |
GTGATGCTAGAACAAGAAGG+GGG | 0.759890 | 5.4:-67677378 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAATATTTTATTTTTTT+AGG | - | chr5.4:67674029-67674048 | None:intergenic | 0.0% |
!!! | AAAAATATTTTATTTTTTTA+GGG | - | chr5.4:67674028-67674047 | None:intergenic | 0.0% |
!! | ATATTTATAATATAACACTA+TGG | + | chr5.4:67674130-67674149 | MS.gene070507:intron | 10.0% |
!! | ATTAAATTAAAAACTTAAGT+TGG | + | chr5.4:67676183-67676202 | MS.gene070507:intron | 10.0% |
!! | TAACAACATTTATTATTATT+AGG | - | chr5.4:67673617-67673636 | None:intergenic | 10.0% |
!! | TTAAATTAAAAACTTAAGTT+GGG | + | chr5.4:67676184-67676203 | MS.gene070507:intron | 10.0% |
!! | TTATTAATCTAAACTATTAA+CGG | - | chr5.4:67673981-67674000 | None:intergenic | 10.0% |
!! | TTATTATATATTCTATATAG+TGG | - | chr5.4:67673189-67673208 | None:intergenic | 10.0% |
!! | TTTAATAAAAAATGAGAAAA+AGG | + | chr5.4:67676523-67676542 | MS.gene070507:intron | 10.0% |
!!! | AATTAATATAAGGATAATTT+TGG | + | chr5.4:67673659-67673678 | MS.gene070507:intron | 10.0% |
!!! | ACAAAAAAATTATCATTTTA+GGG | + | chr5.4:67676024-67676043 | MS.gene070507:intron | 10.0% |
!!! | GCATATATTTAATTTTTTTT+AGG | + | chr5.4:67672748-67672767 | MS.gene070507:intron | 10.0% |
!!! | TCAAAATACATATTTTATAA+TGG | + | chr5.4:67676112-67676131 | MS.gene070507:intron | 10.0% |
!!! | TTCTATTTTTAAATTCTTAA+AGG | + | chr5.4:67674557-67674576 | MS.gene070507:intron | 10.0% |
!! | AAAAGATTGAAACAAATAAA+AGG | + | chr5.4:67676894-67676913 | MS.gene070507:CDS | 15.0% |
!! | AAATTTATCAGTATATTAAG+TGG | + | chr5.4:67675525-67675544 | MS.gene070507:intron | 15.0% |
!! | ATAAATTTATAAGTTTGTGA+GGG | - | chr5.4:67675513-67675532 | None:intergenic | 15.0% |
!! | ATGTGAAAAATAAAAGATAA+TGG | + | chr5.4:67676582-67676601 | MS.gene070507:intron | 15.0% |
!! | CAAAAATAATTAGGTTTAAA+TGG | + | chr5.4:67675806-67675825 | MS.gene070507:intron | 15.0% |
!! | GTTACAAATATATAAGATAA+AGG | + | chr5.4:67676613-67676632 | MS.gene070507:intron | 15.0% |
!! | TAATAATAAATGTTGTTACA+AGG | + | chr5.4:67673619-67673638 | MS.gene070507:intron | 15.0% |
!! | TTAAATTTGAACAAAAGATT+TGG | - | chr5.4:67671927-67671946 | None:intergenic | 15.0% |
!! | TTATATATTTGTAACACTTT+CGG | - | chr5.4:67676608-67676627 | None:intergenic | 15.0% |
!! | TTTCTTATTAACTTCTTTAA+AGG | + | chr5.4:67674642-67674661 | MS.gene070507:intron | 15.0% |
!!! | AAACAACTTTTACTATTATT+AGG | - | chr5.4:67673581-67673600 | None:intergenic | 15.0% |
!!! | AAATACATATTTTATAATGG+AGG | + | chr5.4:67676115-67676134 | MS.gene070507:intron | 15.0% |
!!! | AAATCATAATTTTGAAATGA+AGG | - | chr5.4:67675858-67675877 | None:intergenic | 15.0% |
!!! | AAGATTCATTTTATAATGAA+GGG | + | chr5.4:67673063-67673082 | MS.gene070507:intron | 15.0% |
!!! | ACTTCAAAAATTATGATTTT+TGG | - | chr5.4:67675754-67675773 | None:intergenic | 15.0% |
!!! | ATAATTTTTGAAGTTGAATT+TGG | + | chr5.4:67675760-67675779 | MS.gene070507:intron | 15.0% |
!!! | ATACGAAAATTATCAATTTT+TGG | - | chr5.4:67675683-67675702 | None:intergenic | 15.0% |
!!! | ATTTTAATTAAAAGTGTGTT+TGG | + | chr5.4:67673354-67673373 | MS.gene070507:intron | 15.0% |
!!! | CAAAAAAATTATCATTTTAG+GGG | + | chr5.4:67676025-67676044 | MS.gene070507:intron | 15.0% |
!!! | CCTTATTTAATTAAGTTTAA+GGG | - | chr5.4:67673425-67673444 | None:intergenic | 15.0% |
!!! | GACAAAAAAATTATCATTTT+AGG | + | chr5.4:67676023-67676042 | MS.gene070507:intron | 15.0% |
!!! | GATTTGATATATTTTTATGA+AGG | - | chr5.4:67675566-67675585 | None:intergenic | 15.0% |
!!! | TACGAAAATTATCAATTTTT+GGG | - | chr5.4:67675682-67675701 | None:intergenic | 15.0% |
!!! | TCCTTATTTAATTAAGTTTA+AGG | - | chr5.4:67673426-67673445 | None:intergenic | 15.0% |
!!! | TGAATATACAAATTGATTTT+TGG | - | chr5.4:67674485-67674504 | None:intergenic | 15.0% |
!!! | TGAGATTTTGAATTAATATA+AGG | + | chr5.4:67673649-67673668 | MS.gene070507:intron | 15.0% |
!! | AAGAAAACAAGTTATGTTAT+AGG | - | chr5.4:67676689-67676708 | None:intergenic | 20.0% |
!! | ACTTTCAAAATTTACAATCT+AGG | + | chr5.4:67672506-67672525 | MS.gene070507:intron | 20.0% |
!! | AGTACCTCAATAAAATTTAA+TGG | + | chr5.4:67674325-67674344 | MS.gene070507:intron | 20.0% |
!! | ATGGTTTATTGAATAATTGA+TGG | - | chr5.4:67673219-67673238 | None:intergenic | 20.0% |
!! | CCCTTAAACTTAATTAAATA+AGG | + | chr5.4:67673422-67673441 | MS.gene070507:intron | 20.0% |
!! | GAAAAAATTTGATGCTTATT+AGG | - | chr5.4:67674257-67674276 | None:intergenic | 20.0% |
!! | GAGAAAATTAATTTATCTTC+TGG | + | chr5.4:67672530-67672549 | MS.gene070507:intron | 20.0% |
!! | GATAAATTTATAAGTTTGTG+AGG | - | chr5.4:67675514-67675533 | None:intergenic | 20.0% |
!! | GATAATTAATAACGACAATT+TGG | + | chr5.4:67672981-67673000 | MS.gene070507:intron | 20.0% |
!! | TAAATTTATAAGTTTGTGAG+GGG | - | chr5.4:67675512-67675531 | None:intergenic | 20.0% |
!! | TAACCAAAATAACAAAAAAG+TGG | + | chr5.4:67675385-67675404 | MS.gene070507:CDS | 20.0% |
!! | TATATATTTGTAACACTTTC+GGG | - | chr5.4:67676640-67676659 | None:intergenic | 20.0% |
!! | TGTACACAATACTAAATATA+CGG | - | chr5.4:67672910-67672929 | None:intergenic | 20.0% |
!!! | AAACTTAATGTCTTAAGTTT+TGG | + | chr5.4:67676336-67676355 | MS.gene070507:intron | 20.0% |
!!! | AGTAAATAATCACTCTTTTT+GGG | - | chr5.4:67675935-67675954 | None:intergenic | 20.0% |
!!! | ATTAATTTATCTTCTGGTTA+TGG | + | chr5.4:67672536-67672555 | MS.gene070507:intron | 20.0% |
!!! | ATTACAACAACTTGTTAAAT+AGG | - | chr5.4:67675888-67675907 | None:intergenic | 20.0% |
!!! | CAAAAAAAATTAGCACTTTT+AGG | + | chr5.4:67675728-67675747 | MS.gene070507:intron | 20.0% |
!!! | CAAGATTCATTTTATAATGA+AGG | + | chr5.4:67673062-67673081 | MS.gene070507:intron | 20.0% |
!!! | GATTTTTAATTTGAAGTGTT+TGG | - | chr5.4:67673743-67673762 | None:intergenic | 20.0% |
!!! | TAATATAAGGATAATTTTGG+CGG | + | chr5.4:67673662-67673681 | MS.gene070507:intron | 20.0% |
!!! | TATATTTTTATGAAGGAGTA+AGG | - | chr5.4:67675559-67675578 | None:intergenic | 20.0% |
!!! | TCATCCATTAAATTTTATTG+AGG | - | chr5.4:67674332-67674351 | None:intergenic | 20.0% |
!!! | TGTGAATATTTTAAACCTAA+TGG | - | chr5.4:67674078-67674097 | None:intergenic | 20.0% |
!!! | TTACAACAACTTGTTAAATA+GGG | - | chr5.4:67675887-67675906 | None:intergenic | 20.0% |
!!! | TTTAAATGGACTTATGAAAT+AGG | + | chr5.4:67675820-67675839 | MS.gene070507:intron | 20.0% |
!!! | TTTGGTTCAATTTTTAGAAA+GGG | - | chr5.4:67673725-67673744 | None:intergenic | 20.0% |
! | AAACATTCTATATCTTTGGT+TGG | - | chr5.4:67674598-67674617 | None:intergenic | 25.0% |
! | AACACATTAGCAAATTCAAA+GGG | + | chr5.4:67675603-67675622 | MS.gene070507:intron | 25.0% |
! | AACATTCTATATCTTTGGTT+GGG | - | chr5.4:67674597-67674616 | None:intergenic | 25.0% |
! | AATATTCGAATAATAGCAAC+TGG | - | chr5.4:67672570-67672589 | None:intergenic | 25.0% |
! | AATTGAGAATGAATAAAGAG+TGG | + | chr5.4:67674701-67674720 | MS.gene070507:intron | 25.0% |
! | ACATAAACATAAAATCAGTG+AGG | - | chr5.4:67674918-67674937 | None:intergenic | 25.0% |
! | AGAAGTTAATAAGAAAGAAG+AGG | - | chr5.4:67674638-67674657 | None:intergenic | 25.0% |
! | AGATGATAAATCAGAAAGAT+AGG | + | chr5.4:67675297-67675316 | MS.gene070507:CDS | 25.0% |
! | AGGTTATAAAAAACTAGTTG+TGG | - | chr5.4:67673955-67673974 | None:intergenic | 25.0% |
! | ATAAATCAGAAAGATAGGAA+TGG | + | chr5.4:67675302-67675321 | MS.gene070507:CDS | 25.0% |
! | ATTGAGAATGAATAAAGAGT+GGG | + | chr5.4:67674702-67674721 | MS.gene070507:intron | 25.0% |
! | GAAAAAATTTGATGCGTATT+AGG | - | chr5.4:67674300-67674319 | None:intergenic | 25.0% |
! | GAAGTTAATAAGAAAGAAGA+GGG | - | chr5.4:67674637-67674656 | None:intergenic | 25.0% |
! | GAGTTCTTTATTCATATTGA+CGG | + | chr5.4:67673836-67673855 | MS.gene070507:intron | 25.0% |
! | GTCAAAACATTCTATATCTT+TGG | - | chr5.4:67674602-67674621 | None:intergenic | 25.0% |
! | TAATGACGTACAATTATTGA+TGG | - | chr5.4:67674358-67674377 | None:intergenic | 25.0% |
! | TAATTGAAGTTAGTACCATT+AGG | + | chr5.4:67674060-67674079 | MS.gene070507:intron | 25.0% |
! | TATCACCTAGCTATTTAATT+AGG | - | chr5.4:67672462-67672481 | None:intergenic | 25.0% |
! | TATTGTGATGAAGATAATGA+AGG | - | chr5.4:67677065-67677084 | None:intergenic | 25.0% |
! | TTAGCCAGTTATACTAATAT+TGG | + | chr5.4:67672014-67672033 | MS.gene070507:CDS | 25.0% |
! | TTCTCTACTCAATCAAAATT+GGG | + | chr5.4:67675704-67675723 | MS.gene070507:intron | 25.0% |
! | TTCTCTTCTCATTCAAAATT+GGG | + | chr5.4:67676000-67676019 | MS.gene070507:intron | 25.0% |
! | TTTCTCTACTCAATCAAAAT+TGG | + | chr5.4:67675703-67675722 | MS.gene070507:intron | 25.0% |
! | TTTCTCTTCTCATTCAAAAT+TGG | + | chr5.4:67675999-67676018 | MS.gene070507:intron | 25.0% |
!! | ATACCAAAATGATCAACTTT+TGG | - | chr5.4:67675978-67675997 | None:intergenic | 25.0% |
!! | GACACTTTTATTGTAAAACA+GGG | - | chr5.4:67672813-67672832 | None:intergenic | 25.0% |
!! | GAGTAAATAATCACTCTTTT+TGG | - | chr5.4:67675936-67675955 | None:intergenic | 25.0% |
!! | TATTTGATAATTGACGCATA+TGG | - | chr5.4:67673238-67673257 | None:intergenic | 25.0% |
!! | TGACACTTTTATTGTAAAAC+AGG | - | chr5.4:67672814-67672833 | None:intergenic | 25.0% |
!! | TTATGTGACATCTTTGAAAA+GGG | + | chr5.4:67676244-67676263 | MS.gene070507:intron | 25.0% |
!! | TTTATGTGACATCTTTGAAA+AGG | + | chr5.4:67676243-67676262 | MS.gene070507:intron | 25.0% |
!!! | ACTCCTAAAGTTTTGATTTT+TGG | + | chr5.4:67675656-67675675 | MS.gene070507:intron | 25.0% |
!!! | CTTAAGTTGGGTTTTATAAT+TGG | + | chr5.4:67676196-67676215 | MS.gene070507:intron | 25.0% |
!!! | GATCCACTTTTTTGTTATTT+TGG | - | chr5.4:67675391-67675410 | None:intergenic | 25.0% |
!!! | GTTTGGTTCAATTTTTAGAA+AGG | - | chr5.4:67673726-67673745 | None:intergenic | 25.0% |
!!! | TAAGTGTTGAAACAATTGTA+AGG | - | chr5.4:67676955-67676974 | None:intergenic | 25.0% |
!!! | TACAACAACTTGTTAAATAG+GGG | - | chr5.4:67675886-67675905 | None:intergenic | 25.0% |
!!! | TTGGTTCAATTTTTAGAAAG+GGG | - | chr5.4:67673724-67673743 | None:intergenic | 25.0% |
AAAGATGAGGATTTATCATG+CGG | - | chr5.4:67675470-67675489 | None:intergenic | 30.0% | |
AACACTTGGAATAACTGAAT+TGG | + | chr5.4:67677129-67677148 | MS.gene070507:CDS | 30.0% | |
AATAAGAGCTTCATTGTGAA+TGG | - | chr5.4:67674169-67674188 | None:intergenic | 30.0% | |
ACAAAAAAGTGGATCTTGAT+AGG | + | chr5.4:67675396-67675415 | MS.gene070507:CDS | 30.0% | |
ACAATTCAAAGGGACAAATA+TGG | + | chr5.4:67675083-67675102 | MS.gene070507:CDS | 30.0% | |
ACACATTAGCAAATTCAAAG+GGG | + | chr5.4:67675604-67675623 | MS.gene070507:intron | 30.0% | |
AGCTCAAAGTTAATGATCTT+TGG | + | chr5.4:67676397-67676416 | MS.gene070507:intron | 30.0% | |
AGGTACCTAATTAAATAGCT+AGG | + | chr5.4:67672454-67672473 | MS.gene070507:intron | 30.0% | |
AGTCATAACCAGAAAAACAT+TGG | - | chr5.4:67677266-67677285 | None:intergenic | 30.0% | |
ATGCTTCATCATTGTCAATT+TGG | - | chr5.4:67676826-67676845 | None:intergenic | 30.0% | |
CAAAAAAGTGGATCTTGATA+GGG | + | chr5.4:67675397-67675416 | MS.gene070507:CDS | 30.0% | |
CAAATGCTGTACAATTCAAA+GGG | + | chr5.4:67675073-67675092 | MS.gene070507:CDS | 30.0% | |
CAGTTATACTAATATTGGAC+AGG | + | chr5.4:67672019-67672038 | MS.gene070507:CDS | 30.0% | |
CATAAGATGCTAGATGAATT+GGG | - | chr5.4:67675115-67675134 | None:intergenic | 30.0% | |
CTACCTCTCTCAATATATAT+AGG | - | chr5.4:67673903-67673922 | None:intergenic | 30.0% | |
CTCTCTCATTTCATTATCTT+TGG | + | chr5.4:67677192-67677211 | MS.gene070507:CDS | 30.0% | |
CTGTCCAATATTAGTATAAC+TGG | - | chr5.4:67672021-67672040 | None:intergenic | 30.0% | |
CTTCATCATTGTGTTCAATA+GGG | - | chr5.4:67676868-67676887 | None:intergenic | 30.0% | |
CTTTCTGATTTATCATCTGA+CGG | - | chr5.4:67675295-67675314 | None:intergenic | 30.0% | |
GAACACATTAGCAAATTCAA+AGG | + | chr5.4:67675602-67675621 | MS.gene070507:intron | 30.0% | |
GCTCAAAGTTAATGATCTTT+GGG | + | chr5.4:67676398-67676417 | MS.gene070507:intron | 30.0% | |
GGTTAACCAGAATAATGAAA+CGG | + | chr5.4:67675418-67675437 | MS.gene070507:CDS | 30.0% | |
GTAATAATTCAACACCTTCA+AGG | - | chr5.4:67675043-67675062 | None:intergenic | 30.0% | |
GTATGATGAAGAGTCAAATA+TGG | + | chr5.4:67672097-67672116 | MS.gene070507:CDS | 30.0% | |
GTTATAGGCAAAATTGCATT+CGG | - | chr5.4:67676674-67676693 | None:intergenic | 30.0% | |
GTTCCTATATATATTGAGAG+AGG | + | chr5.4:67673897-67673916 | MS.gene070507:intron | 30.0% | |
TACAAAACTGAAGATTTGTC+TGG | + | chr5.4:67672239-67672258 | MS.gene070507:CDS | 30.0% | |
TATACTAATATTGGACAGGA+TGG | + | chr5.4:67672023-67672042 | MS.gene070507:CDS | 30.0% | |
TCTCACGTTGTTTATAAAAG+TGG | + | chr5.4:67676281-67676300 | MS.gene070507:intron | 30.0% | |
TCTCTACTCAATCAAAATTG+GGG | + | chr5.4:67675705-67675724 | MS.gene070507:intron | 30.0% | |
TCTCTTCTCATTCAAAATTG+GGG | + | chr5.4:67676001-67676020 | MS.gene070507:intron | 30.0% | |
TCTTCATCATTGTGTTCAAT+AGG | - | chr5.4:67676869-67676888 | None:intergenic | 30.0% | |
TGCGGGAAACAAAAATAATT+AGG | + | chr5.4:67675797-67675816 | MS.gene070507:intron | 30.0% | |
TTATAGGCAAAATTGCATTC+GGG | - | chr5.4:67676673-67676692 | None:intergenic | 30.0% | |
TTCTTTATTCATATTGACGG+AGG | + | chr5.4:67673839-67673858 | MS.gene070507:intron | 30.0% | |
! | ACTCCTAAAGTTGTGATTTT+TGG | + | chr5.4:67675952-67675971 | MS.gene070507:intron | 30.0% |
! | ACTGGCTAATAGCTTTTTAA+CGG | - | chr5.4:67672003-67672022 | None:intergenic | 30.0% |
! | ATCTAAACTATTAACGGATC+AGG | - | chr5.4:67673975-67673994 | None:intergenic | 30.0% |
! | CTAATAGCTTTTTAACGGTT+GGG | - | chr5.4:67671998-67672017 | None:intergenic | 30.0% |
! | TAAGGTTTTCTATACTCTGT+GGG | - | chr5.4:67676937-67676956 | None:intergenic | 30.0% |
! | TATGACTGTGATTTTTGTTG+TGG | + | chr5.4:67677279-67677298 | MS.gene070507:CDS | 30.0% |
! | TTCTATTATCCTCCTCTTTT+GGG | + | chr5.4:67677105-67677124 | MS.gene070507:CDS | 30.0% |
! | TTCTCTCTCTTCAATTTTCT+AGG | - | chr5.4:67674422-67674441 | None:intergenic | 30.0% |
!! | ATTTTTGTTTCCCGCATTTT+TGG | - | chr5.4:67675793-67675812 | None:intergenic | 30.0% |
!! | GGACTTGTTAAAATTTGTGA+CGG | + | chr5.4:67672121-67672140 | MS.gene070507:CDS | 30.0% |
!! | TTCAATTTTTAGAAAGGGGA+GGG | - | chr5.4:67673720-67673739 | None:intergenic | 30.0% |
!! | TTCATTATCTTTGGCTTTCA+TGG | + | chr5.4:67677201-67677220 | MS.gene070507:CDS | 30.0% |
!! | TTTACCTTGCTGTTGAAAAT+GGG | + | chr5.4:67672330-67672349 | MS.gene070507:CDS | 30.0% |
!!! | GTTTTTCTTGTTGATGATGA+GGG | - | chr5.4:67677337-67677356 | None:intergenic | 30.0% |
AAACAACCACACAAATGAGT+TGG | - | chr5.4:67676376-67676395 | None:intergenic | 35.0% | |
AACTAAGTAGAACACAGTCA+TGG | - | chr5.4:67675366-67675385 | None:intergenic | 35.0% | |
AAGATGAGGATTTATCATGC+GGG | - | chr5.4:67675469-67675488 | None:intergenic | 35.0% | |
AAGTGATGCTAGAACAAGAA+GGG | - | chr5.4:67677383-67677402 | None:intergenic | 35.0% | |
AATGTTTGCAGCATCTTACA+TGG | + | chr5.4:67676750-67676769 | MS.gene070507:intron | 35.0% | |
ACTAAGTAGAACACAGTCAT+GGG | - | chr5.4:67675365-67675384 | None:intergenic | 35.0% | |
ACTCTTCATCATACTCTTCT+GGG | - | chr5.4:67672091-67672110 | None:intergenic | 35.0% | |
ACTTGTCTGTCTTAAAGATG+AGG | - | chr5.4:67675483-67675502 | None:intergenic | 35.0% | |
AGATTTGTCTGGATACTCAT+TGG | + | chr5.4:67672250-67672269 | MS.gene070507:CDS | 35.0% | |
AGGATGGTATAAAAAGGGAA+TGG | + | chr5.4:67672039-67672058 | MS.gene070507:CDS | 35.0% | |
ATCACTTGCAGAAGGTAAAT+CGG | + | chr5.4:67677396-67677415 | MS.gene070507:CDS | 35.0% | |
ATCCATTTAAGGAACGAAGA+TGG | + | chr5.4:67674981-67675000 | MS.gene070507:CDS | 35.0% | |
ATTCATCTAGCATCTTATGG+TGG | + | chr5.4:67675116-67675135 | MS.gene070507:CDS | 35.0% | |
ATTTAAGGAACGAAGATGGA+AGG | + | chr5.4:67674985-67675004 | MS.gene070507:CDS | 35.0% | |
CATGGAACATTGCATGATAT+AGG | - | chr5.4:67677042-67677061 | None:intergenic | 35.0% | |
CCAATTCATCTAGCATCTTA+TGG | + | chr5.4:67675113-67675132 | MS.gene070507:CDS | 35.0% | |
CCATAAGATGCTAGATGAAT+TGG | - | chr5.4:67675116-67675135 | None:intergenic | 35.0% | |
CGAAGTAGACGATGAAATAA+TGG | + | chr5.4:67673488-67673507 | MS.gene070507:intron | 35.0% | |
CTGTTATCAGTGAACTTACT+TGG | + | chr5.4:67677236-67677255 | MS.gene070507:CDS | 35.0% | |
GAGGAGGATAATAGAACTAA+TGG | - | chr5.4:67677101-67677120 | None:intergenic | 35.0% | |
GCAAATGCTGTACAATTCAA+AGG | + | chr5.4:67675072-67675091 | MS.gene070507:CDS | 35.0% | |
GGGCCAAAAATCAAAACTTT+AGG | - | chr5.4:67675662-67675681 | None:intergenic | 35.0% | |
GTAATAGGAAATGTATCGCA+TGG | - | chr5.4:67677359-67677378 | None:intergenic | 35.0% | |
TACTAGAAATCAAGCCAACT+TGG | + | chr5.4:67674958-67674977 | MS.gene070507:CDS | 35.0% | |
TAGAGAATGCTGGATATGAA+AGG | - | chr5.4:67674456-67674475 | None:intergenic | 35.0% | |
TATCAGTGAACTTACTTGGT+TGG | + | chr5.4:67677240-67677259 | MS.gene070507:CDS | 35.0% | |
TCCAAAATGTGGAAAATACG+AGG | + | chr5.4:67676088-67676107 | MS.gene070507:intron | 35.0% | |
TCCTAAAGTTGAAATCCGTT+TGG | + | chr5.4:67673260-67673279 | MS.gene070507:intron | 35.0% | |
TGACAAGAGCAATATCAGTA+GGG | + | chr5.4:67672190-67672209 | MS.gene070507:CDS | 35.0% | |
TGAGGCAAATTGCAGTTATT+AGG | + | chr5.4:67674890-67674909 | MS.gene070507:intron | 35.0% | |
TGATGAAGAGTCAAATATGG+AGG | + | chr5.4:67672100-67672119 | MS.gene070507:CDS | 35.0% | |
TGATGAAGATAATGAAGGCA+TGG | - | chr5.4:67677060-67677079 | None:intergenic | 35.0% | |
TGGACAGGATGGTATAAAAA+GGG | + | chr5.4:67672034-67672053 | MS.gene070507:CDS | 35.0% | |
TGGCCAAAAATCACAACTTT+AGG | - | chr5.4:67675958-67675977 | None:intergenic | 35.0% | |
TTCCATCTTCGTTCCTTAAA+TGG | - | chr5.4:67674986-67675005 | None:intergenic | 35.0% | |
TTCCTTAAATGGATCCAAGT+TGG | - | chr5.4:67674975-67674994 | None:intergenic | 35.0% | |
TTGCACTAGAATCCAAAATG+TGG | + | chr5.4:67676077-67676096 | MS.gene070507:intron | 35.0% | |
TTGGACAGGATGGTATAAAA+AGG | + | chr5.4:67672033-67672052 | MS.gene070507:CDS | 35.0% | |
TTGGTTGTTATAGAGAATGC+TGG | - | chr5.4:67674466-67674485 | None:intergenic | 35.0% | |
! | AAAAGTGTGTTTGGTTCACA+AGG | + | chr5.4:67673363-67673382 | MS.gene070507:intron | 35.0% |
! | AAAGTGTGTTTGGTTCACAA+GGG | + | chr5.4:67673364-67673383 | MS.gene070507:intron | 35.0% |
! | ACCAAACGGATTTCAACTTT+AGG | - | chr5.4:67673264-67673283 | None:intergenic | 35.0% |
! | GAGAGAGGTAGTAATTTTTG+AGG | + | chr5.4:67673912-67673931 | MS.gene070507:intron | 35.0% |
! | GCTAATAGCTTTTTAACGGT+TGG | - | chr5.4:67671999-67672018 | None:intergenic | 35.0% |
! | GTAAGGTTTTCTATACTCTG+TGG | - | chr5.4:67676938-67676957 | None:intergenic | 35.0% |
! | GTTCTATTATCCTCCTCTTT+TGG | + | chr5.4:67677104-67677123 | MS.gene070507:CDS | 35.0% |
! | TCCTCGTATTTTCCACATTT+TGG | - | chr5.4:67676092-67676111 | None:intergenic | 35.0% |
! | TTAATACCCTTAAAGAGTGC+TGG | + | chr5.4:67674853-67674872 | MS.gene070507:intron | 35.0% |
! | TTGGACTAGAACCAAAAATG+CGG | + | chr5.4:67675779-67675798 | MS.gene070507:intron | 35.0% |
! | TTTATACCAGCCTTGCTATA+TGG | - | chr5.4:67676470-67676489 | None:intergenic | 35.0% |
!! | CTTTACCTTGCTGTTGAAAA+TGG | + | chr5.4:67672329-67672348 | MS.gene070507:CDS | 35.0% |
!! | GTTCAATTTTTAGAAAGGGG+AGG | - | chr5.4:67673721-67673740 | None:intergenic | 35.0% |
!! | TAATACCCTTAAAGAGTGCT+GGG | + | chr5.4:67674854-67674873 | MS.gene070507:intron | 35.0% |
!! | TCAATTTTTAGAAAGGGGAG+GGG | - | chr5.4:67673719-67673738 | None:intergenic | 35.0% |
!! | TCTTATTTGAGCATCGAAGT+AGG | + | chr5.4:67674182-67674201 | MS.gene070507:intron | 35.0% |
!! | TGGCCAAAAGTTGATCATTT+TGG | + | chr5.4:67675972-67675991 | MS.gene070507:intron | 35.0% |
!! | TTACCTTGCTGTTGAAAATG+GGG | + | chr5.4:67672331-67672350 | MS.gene070507:CDS | 35.0% |
!!! | GGTTTTTCTTGTTGATGATG+AGG | - | chr5.4:67677338-67677357 | None:intergenic | 35.0% |
!!! | TTTTTTCCTTGTTGTCCGTT+TGG | - | chr5.4:67673806-67673825 | None:intergenic | 35.0% |
ACAGATGCTGCATAATGAAG+TGG | - | chr5.4:67675014-67675033 | None:intergenic | 40.0% | |
ACCTGGACATAATAAACGTG+AGG | - | chr5.4:67676428-67676447 | None:intergenic | 40.0% | |
ACTTCTTCACTACTTCCACA+TGG | - | chr5.4:67675142-67675161 | None:intergenic | 40.0% | |
AGCCAACTTGGATCCATTTA+AGG | + | chr5.4:67674970-67674989 | MS.gene070507:CDS | 40.0% | |
AGGCAACACTATGTTACATG+AGG | + | chr5.4:67672157-67672176 | MS.gene070507:CDS | 40.0% | |
AGTGATGCTAGAACAAGAAG+GGG | - | chr5.4:67677382-67677401 | None:intergenic | 40.0% | |
ATAGCCAAGACCCTAAGTTA+GGG | - | chr5.4:67673165-67673184 | None:intergenic | 40.0% | |
ATCTTGCAGCCAAATGCAAA+GGG | - | chr5.4:67675334-67675353 | None:intergenic | 40.0% | |
ATGAGAGAGATACCAAGAAG+CGG | - | chr5.4:67677181-67677200 | None:intergenic | 40.0% | |
ATGTTTCGCACCATATAGCA+AGG | + | chr5.4:67676457-67676476 | MS.gene070507:intron | 40.0% | |
CAAGAGCCGTTTCATTATTC+TGG | - | chr5.4:67675427-67675446 | None:intergenic | 40.0% | |
CAAGTGATGCTAGAACAAGA+AGG | - | chr5.4:67677384-67677403 | None:intergenic | 40.0% | |
CAGAAAGATGTTAAGCCGAA+GGG | + | chr5.4:67672392-67672411 | MS.gene070507:CDS | 40.0% | |
CAGAAGGTAAATCGGATCAT+TGG | + | chr5.4:67677404-67677423 | MS.gene070507:CDS | 40.0% | |
CCTGGACATAATAAACGTGA+GGG | - | chr5.4:67676427-67676446 | None:intergenic | 40.0% | |
CTACATATTGCAGCTTGGTA+TGG | + | chr5.4:67671864-67671883 | MS.gene070507:CDS | 40.0% | |
CTCCTAATTCTCGAACCAAA+CGG | - | chr5.4:67673278-67673297 | None:intergenic | 40.0% | |
CTGGACATAATAAACGTGAG+GGG | - | chr5.4:67676426-67676445 | None:intergenic | 40.0% | |
CTTCATTATGCAGCATCTGT+AGG | + | chr5.4:67675014-67675033 | MS.gene070507:CDS | 40.0% | |
CTTCGGCTTAACATCTTTCT+GGG | - | chr5.4:67672393-67672412 | None:intergenic | 40.0% | |
GACTCTTCATCATACTCTTC+TGG | - | chr5.4:67672092-67672111 | None:intergenic | 40.0% | |
GCAATCATGAAGCAGAATCA+AGG | + | chr5.4:67672434-67672453 | MS.gene070507:CDS | 40.0% | |
GTGACAAGAGCAATATCAGT+AGG | + | chr5.4:67672189-67672208 | MS.gene070507:CDS | 40.0% | |
TAGAACAAGAAGGGGGTAAT+AGG | - | chr5.4:67677374-67677393 | None:intergenic | 40.0% | |
TCCAAAACTCTCGAACCAAA+CGG | + | chr5.4:67673788-67673807 | MS.gene070507:intron | 40.0% | |
TGATGTCCAACTCATTTGTG+TGG | + | chr5.4:67676367-67676386 | MS.gene070507:intron | 40.0% | |
TGTATCCCAGCACTCTTTAA+GGG | - | chr5.4:67674862-67674881 | None:intergenic | 40.0% | |
TTCATGATTGCTGCTACAAC+AGG | - | chr5.4:67672425-67672444 | None:intergenic | 40.0% | |
TTCGGCTTAACATCTTTCTG+GGG | - | chr5.4:67672392-67672411 | None:intergenic | 40.0% | |
TTTATTATGTCCAGGTCGTG+CGG | + | chr5.4:67676432-67676451 | MS.gene070507:intron | 40.0% | |
! | AAGTGTGTTTGGTTCACAAG+GGG | + | chr5.4:67673365-67673384 | MS.gene070507:intron | 40.0% |
! | ATAGTTTGCACCCCTAACTT+AGG | + | chr5.4:67673151-67673170 | MS.gene070507:intron | 40.0% |
! | ATCCGTTTGGTTCGAGAATT+AGG | + | chr5.4:67673273-67673292 | MS.gene070507:intron | 40.0% |
! | CTGGGATACACTGTTTTATG+AGG | + | chr5.4:67674872-67674891 | MS.gene070507:intron | 40.0% |
! | CTTTTTAACGAGTGTCTCCA+GGG | + | chr5.4:67674726-67674745 | MS.gene070507:intron | 40.0% |
! | GTTTGGTTCGAGAATTAGGA+GGG | + | chr5.4:67673277-67673296 | MS.gene070507:intron | 40.0% |
! | TAGTTTGCACCCCTAACTTA+GGG | + | chr5.4:67673152-67673171 | MS.gene070507:intron | 40.0% |
! | TCTTTTTAACGAGTGTCTCC+AGG | + | chr5.4:67674725-67674744 | MS.gene070507:intron | 40.0% |
! | TGGACTAGAACCAAAAATGC+GGG | + | chr5.4:67675780-67675799 | MS.gene070507:intron | 40.0% |
! | TGTGACATCTTTGAAAAGGG+AGG | + | chr5.4:67676247-67676266 | MS.gene070507:intron | 40.0% |
! | TTTGGTTCGAGAATTAGGAG+GGG | + | chr5.4:67673278-67673297 | MS.gene070507:intron | 40.0% |
!! | AGGGAAGGAATTTTAACGGA+GGG | + | chr5.4:67673316-67673335 | MS.gene070507:intron | 40.0% |
!! | TCAATAGGGAGTATTGCACT+TGG | - | chr5.4:67676854-67676873 | None:intergenic | 40.0% |
!! | TTATCTTTGGCTTTCATGGC+TGG | + | chr5.4:67677205-67677224 | MS.gene070507:CDS | 40.0% |
!! | TTCTTGTTGATGATGAGGGA+AGG | - | chr5.4:67677333-67677352 | None:intergenic | 40.0% |
!! | TTGGTTGGCCAATGTTTTTC+TGG | + | chr5.4:67677255-67677274 | MS.gene070507:CDS | 40.0% |
!!! | TTTGGTTCGAGAGTTTTGGA+GGG | - | chr5.4:67673788-67673807 | None:intergenic | 40.0% |
ACAACAGGCGATAATCCCTT+CGG | - | chr5.4:67672410-67672429 | None:intergenic | 45.0% | |
ACCTCTTGCAGCAACATGTA+AGG | - | chr5.4:67671967-67671986 | None:intergenic | 45.0% | |
CAAGAAGCGGCATAACGATT+TGG | - | chr5.4:67677168-67677187 | None:intergenic | 45.0% | |
CAGTGCTACATATTGCAGCT+TGG | + | chr5.4:67671859-67671878 | MS.gene070507:CDS | 45.0% | |
CATAGCCAAGACCCTAAGTT+AGG | - | chr5.4:67673166-67673185 | None:intergenic | 45.0% | |
CCAGAAAGATGTTAAGCCGA+AGG | + | chr5.4:67672391-67672410 | MS.gene070507:CDS | 45.0% | |
CCCTCACGTTTATTATGTCC+AGG | + | chr5.4:67676424-67676443 | MS.gene070507:intron | 45.0% | |
CCTTCGGCTTAACATCTTTC+TGG | - | chr5.4:67672394-67672413 | None:intergenic | 45.0% | |
CTTCACATTGCAGCAGACAA+TGG | + | chr5.4:67675221-67675240 | MS.gene070507:CDS | 45.0% | |
GATCTTGCAGCCAAATGCAA+AGG | - | chr5.4:67675335-67675354 | None:intergenic | 45.0% | |
GCATCTGTAGGTTACCTTGA+AGG | + | chr5.4:67675026-67675045 | MS.gene070507:CDS | 45.0% | |
GTGATGCTAGAACAAGAAGG+GGG | - | chr5.4:67677381-67677400 | None:intergenic | 45.0% | |
GTGTATCCCAGCACTCTTTA+AGG | - | chr5.4:67674863-67674882 | None:intergenic | 45.0% | |
GTTCTAGCATCACTTGCAGA+AGG | + | chr5.4:67677388-67677407 | MS.gene070507:CDS | 45.0% | |
TAGCCAAGACCCTAAGTTAG+GGG | - | chr5.4:67673164-67673183 | None:intergenic | 45.0% | |
TCGGCTTAACATCTTTCTGG+GGG | - | chr5.4:67672391-67672410 | None:intergenic | 45.0% | |
TCTTGCAGCCAAATGCAAAG+GGG | - | chr5.4:67675333-67675352 | None:intergenic | 45.0% | |
TGCTGTTGAAAATGGGGACA+AGG | + | chr5.4:67672337-67672356 | MS.gene070507:CDS | 45.0% | |
TGGACTGCACTTAAATCTGC+TGG | + | chr5.4:67676770-67676789 | MS.gene070507:CDS | 45.0% | |
TTACATGTTGCTGCAAGAGG+TGG | + | chr5.4:67671966-67671985 | MS.gene070507:CDS | 45.0% | |
! | CAAATCGTTATGCCGCTTCT+TGG | + | chr5.4:67677166-67677185 | MS.gene070507:CDS | 45.0% |
! | CGTTTGGTTCGAGAATTAGG+AGG | + | chr5.4:67673276-67673295 | MS.gene070507:intron | 45.0% |
! | GAAGTGTCAAGCATCTCTGT+GGG | - | chr5.4:67675185-67675204 | None:intergenic | 45.0% |
! | GGGGAGGGAAGGAATTTTAA+CGG | + | chr5.4:67673312-67673331 | MS.gene070507:intron | 45.0% |
! | GTGACGGAGAAGAATGTTCA+AGG | + | chr5.4:67672137-67672156 | MS.gene070507:CDS | 45.0% |
! | TGTCCCCATTTTCAACAGCA+AGG | - | chr5.4:67672337-67672356 | None:intergenic | 45.0% |
! | TTCCAAGTGTTGCCCAAAAG+AGG | - | chr5.4:67677120-67677139 | None:intergenic | 45.0% |
!! | AAGGAATTTTAACGGAGGGG+AGG | + | chr5.4:67673320-67673339 | MS.gene070507:intron | 45.0% |
!! | AGAAGTGTCAAGCATCTCTG+TGG | - | chr5.4:67675186-67675205 | None:intergenic | 45.0% |
!! | AGGAATTTTAACGGAGGGGA+GGG | + | chr5.4:67673321-67673340 | MS.gene070507:intron | 45.0% |
!! | AGGGAGTATTGCACTTGGTT+TGG | - | chr5.4:67676849-67676868 | None:intergenic | 45.0% |
!! | ATTTTTAGAAAGGGGAGGGG+AGG | - | chr5.4:67673716-67673735 | None:intergenic | 45.0% |
!! | GAGGGAAGGAATTTTAACGG+AGG | + | chr5.4:67673315-67673334 | MS.gene070507:intron | 45.0% |
!! | GGGAAGGAATTTTAACGGAG+GGG | + | chr5.4:67673317-67673336 | MS.gene070507:intron | 45.0% |
!! | GTTTGGTTCGAGAGTTTTGG+AGG | - | chr5.4:67673789-67673808 | None:intergenic | 45.0% |
!! | TCCGTTTGGTTCGAGAGTTT+TGG | - | chr5.4:67673792-67673811 | None:intergenic | 45.0% |
!! | TTTTTAGAAAGGGGAGGGGA+GGG | - | chr5.4:67673715-67673734 | None:intergenic | 45.0% |
!!! | TTGGTTCGAGAGTTTTGGAG+GGG | - | chr5.4:67673787-67673806 | None:intergenic | 45.0% |
!!! | AAGTTTTTAATTTAATTATT+TGG | - | chr5.4:67676179-67676198 | None:intergenic | 5.0% |
AGCATCTTATGGTGGCCATG+TGG | + | chr5.4:67675124-67675143 | MS.gene070507:CDS | 50.0% | |
CTCGAACCAAACGGACAACA+AGG | + | chr5.4:67673797-67673816 | MS.gene070507:intron | 50.0% | |
GCAGCATGTTTAGCTGTTCC+AGG | + | chr5.4:67676992-67677011 | MS.gene070507:CDS | 50.0% | |
GCCTTACATGTTGCTGCAAG+AGG | + | chr5.4:67671963-67671982 | MS.gene070507:CDS | 50.0% | |
GTTCGAGAATTAGGAGGGGA+GGG | + | chr5.4:67673282-67673301 | MS.gene070507:intron | 50.0% | |
TCAAGCATCTCTGTGGGATC+AGG | - | chr5.4:67675179-67675198 | None:intergenic | 50.0% | |
TGGAGACACCCCTTTGCATT+TGG | + | chr5.4:67675322-67675341 | MS.gene070507:CDS | 50.0% | |
TTCGAGAATTAGGAGGGGAG+GGG | + | chr5.4:67673283-67673302 | MS.gene070507:intron | 50.0% | |
TTCGCACCATATAGCAAGGC+TGG | + | chr5.4:67676461-67676480 | MS.gene070507:intron | 50.0% | |
! | AGAATGCTTACAGAGTGCCC+TGG | - | chr5.4:67674746-67674765 | None:intergenic | 50.0% |
! | CAAGTGTTGCCCAAAAGAGG+AGG | - | chr5.4:67677117-67677136 | None:intergenic | 50.0% |
! | CTCCTCTTTTGGGCAACACT+TGG | + | chr5.4:67677115-67677134 | MS.gene070507:CDS | 50.0% |
! | GCTTTTCCTTGTGCTTCACC+TGG | - | chr5.4:67677013-67677032 | None:intergenic | 50.0% |
! | GTGTTTGGTTCACAAGGGGA+GGG | + | chr5.4:67673369-67673388 | MS.gene070507:intron | 50.0% |
! | TGTGTTTGGTTCACAAGGGG+AGG | + | chr5.4:67673368-67673387 | MS.gene070507:intron | 50.0% |
! | TGTTTGGTTCACAAGGGGAG+GGG | + | chr5.4:67673370-67673389 | MS.gene070507:intron | 50.0% |
!! | GGAATTTTAACGGAGGGGAG+GGG | + | chr5.4:67673322-67673341 | MS.gene070507:intron | 50.0% |
!! | TTTTAGAAAGGGGAGGGGAG+GGG | - | chr5.4:67673714-67673733 | None:intergenic | 50.0% |
!!! | TTCGAGAGTTTTGGAGGGGA+GGG | - | chr5.4:67673783-67673802 | None:intergenic | 50.0% |
AGAATTAGGAGGGGAGGGGA+GGG | + | chr5.4:67673287-67673306 | MS.gene070507:intron | 55.0% | |
CGAAACATTTCCGCACGACC+TGG | - | chr5.4:67676445-67676464 | None:intergenic | 55.0% | |
GCACCCCTAACTTAGGGTCT+TGG | + | chr5.4:67673158-67673177 | MS.gene070507:intron | 55.0% | |
GCTGTTCCAGGTGAAGCACA+AGG | + | chr5.4:67677004-67677023 | MS.gene070507:CDS | 55.0% | |
GGTTCGAGAATTAGGAGGGG+AGG | + | chr5.4:67673281-67673300 | MS.gene070507:intron | 55.0% | |
! | TTTTAACGGAGGGGAGGGGA+GGG | + | chr5.4:67673326-67673345 | MS.gene070507:intron | 55.0% |
!! | ATTTTAACGGAGGGGAGGGG+AGG | + | chr5.4:67673325-67673344 | MS.gene070507:intron | 55.0% |
!!! | GTTCGAGAGTTTTGGAGGGG+AGG | - | chr5.4:67673784-67673803 | None:intergenic | 55.0% |
!!! | TCGAGAGTTTTGGAGGGGAG+GGG | - | chr5.4:67673782-67673801 | None:intergenic | 55.0% |
GAATTAGGAGGGGAGGGGAG+GGG | + | chr5.4:67673288-67673307 | MS.gene070507:intron | 60.0% | |
GAGAATTAGGAGGGGAGGGG+AGG | + | chr5.4:67673286-67673305 | MS.gene070507:intron | 60.0% | |
TGGTTCACAAGGGGAGGGGA+GGG | + | chr5.4:67673374-67673393 | MS.gene070507:intron | 60.0% | |
TTGGTTCACAAGGGGAGGGG+AGG | + | chr5.4:67673373-67673392 | MS.gene070507:intron | 60.0% | |
TTTAACGGAGGGGAGGGGAG+GGG | + | chr5.4:67673327-67673346 | MS.gene070507:intron | 60.0% | |
!!! | AGAGTTTTGGAGGGGAGGGG+AGG | - | chr5.4:67673779-67673798 | None:intergenic | 60.0% |
!!! | AGTTTTGGAGGGGAGGGGAG+GGG | - | chr5.4:67673777-67673796 | None:intergenic | 60.0% |
!!! | GAGTTTTGGAGGGGAGGGGA+GGG | - | chr5.4:67673778-67673797 | None:intergenic | 60.0% |
AGAAAGGGGAGGGGAGGGGT+GGG | - | chr5.4:67673710-67673729 | None:intergenic | 65.0% | |
TAGAAAGGGGAGGGGAGGGG+TGG | - | chr5.4:67673711-67673730 | None:intergenic | 65.0% | |
GAAAGGGGAGGGGAGGGGTG+GGG | - | chr5.4:67673709-67673728 | None:intergenic | 70.0% | |
TAGGAGGGGAGGGGAGGGGA+GGG | + | chr5.4:67673292-67673311 | MS.gene070507:intron | 70.0% | |
TTAGGAGGGGAGGGGAGGGG+AGG | + | chr5.4:67673291-67673310 | MS.gene070507:intron | 70.0% | |
TTGGAGGGGAGGGGAGGGGA+GGG | - | chr5.4:67673773-67673792 | None:intergenic | 70.0% | |
TTTGGAGGGGAGGGGAGGGG+AGG | - | chr5.4:67673774-67673793 | None:intergenic | 70.0% | |
AGGAGGGGAGGGGAGGGGAG+GGG | + | chr5.4:67673293-67673312 | MS.gene070507:intron | 75.0% | |
AGGGGAGGGGAGGGGAGGGA+AGG | + | chr5.4:67673301-67673320 | MS.gene070507:intron | 75.0% | |
TGGAGGGGAGGGGAGGGGAG+GGG | - | chr5.4:67673772-67673791 | None:intergenic | 75.0% | |
! | AGGGGAGGGGAGGGGAGGGG+AGG | + | chr5.4:67673296-67673315 | MS.gene070507:intron | 80.0% |
! | AGGGGAGGGGAGGGGAGGGG+AGG | - | chr5.4:67673315-67673296 | None:intergenic | 80.0% |
! | AGGGGAGGGGAGGGGTGGGG+AGG | - | chr5.4:67673706-67673725 | None:intergenic | 80.0% |
! | GGGAGGGGAGGGGAGGGGAG+GGG | - | chr5.4:67673317-67673298 | None:intergenic | 80.0% |
! | GGGAGGGGAGGGGTGGGGAG+GGG | - | chr5.4:67673704-67673723 | None:intergenic | 80.0% |
! | GGGGAGGGGAGGGGAGGGGA+GGG | + | chr5.4:67673297-67673316 | MS.gene070507:intron | 80.0% |
! | GGGGAGGGGAGGGGAGGGGA+GGG | - | chr5.4:67673316-67673297 | None:intergenic | 80.0% |
! | GGGGAGGGGAGGGGTGGGGA+GGG | - | chr5.4:67673705-67673724 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 67671849 | 67677432 | 67671849 | ID=MS.gene070507 |
chr5.4 | mRNA | 67671849 | 67677432 | 67671849 | ID=MS.gene070507.t1;Parent=MS.gene070507 |
chr5.4 | exon | 67671849 | 67672455 | 67671849 | ID=MS.gene070507.t1.exon1;Parent=MS.gene070507.t1 |
chr5.4 | CDS | 67671849 | 67672455 | 67671849 | ID=cds.MS.gene070507.t1;Parent=MS.gene070507.t1 |
chr5.4 | exon | 67674943 | 67675451 | 67674943 | ID=MS.gene070507.t1.exon2;Parent=MS.gene070507.t1 |
chr5.4 | CDS | 67674943 | 67675451 | 67674943 | ID=cds.MS.gene070507.t1;Parent=MS.gene070507.t1 |
chr5.4 | exon | 67676761 | 67677432 | 67676761 | ID=MS.gene070507.t1.exon3;Parent=MS.gene070507.t1 |
chr5.4 | CDS | 67676761 | 67677432 | 67676761 | ID=cds.MS.gene070507.t1;Parent=MS.gene070507.t1 |
Gene Sequence |
Protein sequence |