Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016758.t1 | XP_003616929.1 | 82.4 | 712 | 96 | 3 | 1 | 687 | 1 | 708 | 0.00E+00 | 1086.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016758.t1 | Q8LPS2 | 24.9 | 658 | 381 | 20 | 43 | 667 | 55 | 632 | 1.4e-13 | 79.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016758.t1 | G7K7K3 | 82.4 | 712 | 96 | 3 | 1 | 687 | 1 | 708 | 0.0e+00 | 1086.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016758.t1 | MTR_5g085830 | 85.302 | 728 | 46 | 5 | 1 | 687 | 1 | 708 | 0.0 | 1233 |
MS.gene016758.t1 | MTR_5g085810 | 72.740 | 708 | 139 | 3 | 31 | 684 | 26 | 733 | 0.0 | 997 |
MS.gene016758.t1 | MTR_5g085480 | 57.781 | 694 | 236 | 11 | 42 | 684 | 2 | 689 | 0.0 | 715 |
MS.gene016758.t1 | MTR_5g085480 | 58.537 | 533 | 169 | 8 | 200 | 684 | 1 | 529 | 0.0 | 557 |
MS.gene016758.t1 | MTR_2g033050 | 63.772 | 403 | 133 | 7 | 89 | 482 | 3 | 401 | 1.25e-173 | 502 |
MS.gene016758.t1 | MTR_5g085490 | 57.088 | 261 | 105 | 3 | 41 | 294 | 32 | 292 | 1.54e-91 | 286 |
MS.gene016758.t1 | MTR_5g085500 | 62.963 | 216 | 62 | 3 | 474 | 686 | 260 | 460 | 1.54e-78 | 258 |
MS.gene016758.t1 | MTR_5g085500 | 69.277 | 166 | 47 | 2 | 310 | 473 | 2 | 165 | 1.05e-72 | 243 |
MS.gene016758.t1 | MTR_5g085440 | 45.338 | 311 | 135 | 6 | 377 | 686 | 79 | 355 | 3.46e-73 | 241 |
MS.gene016758.t1 | MTR_5g085440 | 53.548 | 155 | 64 | 3 | 20 | 167 | 3 | 156 | 1.96e-40 | 152 |
MS.gene016758.t1 | MTR_5g085520 | 60.914 | 197 | 72 | 2 | 95 | 286 | 2 | 198 | 4.49e-73 | 235 |
MS.gene016758.t1 | MTR_2g033045 | 61.502 | 213 | 63 | 3 | 475 | 687 | 28 | 221 | 2.05e-72 | 237 |
MS.gene016758.t1 | MTR_5g085530 | 71.233 | 73 | 20 | 1 | 288 | 359 | 1 | 73 | 4.94e-29 | 110 |
MS.gene016758.t1 | MTR_7g100430 | 25.659 | 417 | 267 | 13 | 251 | 657 | 162 | 545 | 5.21e-20 | 94.7 |
MS.gene016758.t1 | MTR_7g117620 | 24.176 | 455 | 279 | 13 | 240 | 655 | 74 | 501 | 8.26e-20 | 94.0 |
MS.gene016758.t1 | MTR_4g062100 | 24.027 | 437 | 282 | 13 | 251 | 667 | 109 | 515 | 4.54e-19 | 91.7 |
MS.gene016758.t1 | MTR_1g115575 | 24.537 | 432 | 274 | 14 | 251 | 669 | 170 | 562 | 1.50e-18 | 90.1 |
MS.gene016758.t1 | MTR_1g032100 | 22.912 | 467 | 307 | 12 | 244 | 675 | 53 | 501 | 3.47e-18 | 89.0 |
MS.gene016758.t1 | MTR_7g100390 | 23.362 | 458 | 297 | 14 | 251 | 687 | 88 | 512 | 1.65e-16 | 83.6 |
MS.gene016758.t1 | MTR_2g096190 | 22.989 | 435 | 246 | 11 | 251 | 647 | 105 | 488 | 6.71e-16 | 81.6 |
MS.gene016758.t1 | MTR_8g105260 | 22.803 | 421 | 284 | 10 | 244 | 636 | 60 | 467 | 3.35e-14 | 76.3 |
MS.gene016758.t1 | MTR_3g105650 | 22.590 | 363 | 253 | 9 | 297 | 643 | 55 | 405 | 7.70e-14 | 74.7 |
MS.gene016758.t1 | MTR_1g069110 | 24.703 | 421 | 242 | 18 | 295 | 655 | 30 | 435 | 1.12e-13 | 74.3 |
MS.gene016758.t1 | MTR_2g096760 | 34.356 | 163 | 97 | 6 | 286 | 441 | 18 | 177 | 3.70e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016758.t1 | AT4G03500 | 31.891 | 624 | 355 | 15 | 74 | 687 | 54 | 617 | 1.19e-74 | 253 |
MS.gene016758.t1 | AT4G03500 | 31.891 | 624 | 355 | 15 | 74 | 687 | 54 | 617 | 1.19e-74 | 253 |
MS.gene016758.t1 | AT4G03500 | 31.891 | 624 | 355 | 15 | 74 | 687 | 77 | 640 | 1.64e-74 | 253 |
MS.gene016758.t1 | AT4G03460 | 32.841 | 609 | 327 | 15 | 96 | 687 | 81 | 624 | 1.65e-68 | 236 |
MS.gene016758.t1 | AT1G03670 | 29.186 | 651 | 368 | 19 | 62 | 687 | 30 | 612 | 8.97e-67 | 231 |
MS.gene016758.t1 | AT4G03460 | 31.962 | 632 | 345 | 16 | 76 | 687 | 26 | 592 | 5.32e-66 | 228 |
MS.gene016758.t1 | AT4G03440 | 25.253 | 693 | 434 | 18 | 34 | 685 | 48 | 697 | 2.95e-49 | 184 |
MS.gene016758.t1 | AT4G03440 | 25.253 | 693 | 434 | 18 | 34 | 685 | 48 | 697 | 2.95e-49 | 184 |
MS.gene016758.t1 | AT4G03440 | 25.253 | 693 | 434 | 18 | 34 | 685 | 55 | 704 | 3.50e-49 | 184 |
MS.gene016758.t1 | AT4G03450 | 26.930 | 557 | 343 | 13 | 91 | 635 | 67 | 571 | 7.49e-44 | 167 |
MS.gene016758.t1 | AT4G03450 | 27.648 | 557 | 339 | 15 | 91 | 635 | 67 | 571 | 1.08e-43 | 167 |
MS.gene016758.t1 | AT4G03490 | 26.016 | 615 | 373 | 17 | 116 | 683 | 13 | 592 | 1.35e-43 | 166 |
MS.gene016758.t1 | AT4G03490 | 26.016 | 615 | 373 | 17 | 116 | 683 | 23 | 602 | 1.53e-43 | 166 |
MS.gene016758.t1 | AT4G14390 | 26.403 | 606 | 347 | 17 | 89 | 668 | 107 | 639 | 6.43e-42 | 162 |
MS.gene016758.t1 | AT4G14390 | 26.403 | 606 | 347 | 17 | 89 | 668 | 126 | 658 | 6.45e-42 | 162 |
MS.gene016758.t1 | AT4G03490 | 26.263 | 594 | 354 | 17 | 116 | 663 | 23 | 578 | 1.29e-41 | 162 |
MS.gene016758.t1 | AT4G14390 | 26.194 | 607 | 348 | 17 | 89 | 668 | 126 | 659 | 2.70e-41 | 160 |
MS.gene016758.t1 | AT4G03470 | 26.136 | 616 | 359 | 15 | 82 | 673 | 106 | 649 | 5.17e-41 | 160 |
MS.gene016758.t1 | AT4G03480 | 25.777 | 547 | 333 | 15 | 82 | 589 | 144 | 656 | 6.51e-39 | 153 |
MS.gene016758.t1 | AT4G03480 | 25.636 | 550 | 333 | 15 | 82 | 589 | 144 | 659 | 1.77e-38 | 152 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G05040 | 28.630 | 489 | 278 | 14 | 90 | 567 | 110 | 538 | 2.20e-35 | 142 |
MS.gene016758.t1 | AT4G03490 | 24.916 | 594 | 324 | 17 | 116 | 663 | 3 | 520 | 4.04e-35 | 142 |
MS.gene016758.t1 | AT4G03490 | 24.916 | 594 | 324 | 17 | 116 | 663 | 13 | 530 | 5.46e-35 | 141 |
MS.gene016758.t1 | AT4G14400 | 26.656 | 649 | 381 | 22 | 43 | 667 | 55 | 632 | 6.40e-34 | 138 |
MS.gene016758.t1 | AT4G14400 | 27.167 | 600 | 354 | 19 | 89 | 667 | 29 | 566 | 5.38e-33 | 135 |
MS.gene016758.t1 | AT4G14400 | 27.167 | 600 | 354 | 19 | 89 | 667 | 29 | 566 | 5.38e-33 | 135 |
MS.gene016758.t1 | AT4G14390 | 25.519 | 482 | 274 | 15 | 89 | 552 | 107 | 521 | 2.94e-27 | 117 |
MS.gene016758.t1 | AT3G12360 | 23.937 | 447 | 294 | 12 | 233 | 669 | 150 | 560 | 8.54e-20 | 94.4 |
MS.gene016758.t1 | AT3G12360 | 23.937 | 447 | 294 | 12 | 233 | 669 | 138 | 548 | 1.07e-19 | 94.0 |
MS.gene016758.t1 | AT5G02620 | 24.528 | 424 | 279 | 8 | 240 | 631 | 49 | 463 | 1.17e-18 | 90.5 |
MS.gene016758.t1 | AT5G02620 | 24.528 | 424 | 279 | 8 | 240 | 631 | 49 | 463 | 1.17e-18 | 90.5 |
MS.gene016758.t1 | AT5G02620 | 24.528 | 424 | 279 | 8 | 240 | 631 | 49 | 463 | 1.17e-18 | 90.5 |
MS.gene016758.t1 | AT2G31820 | 25.172 | 437 | 275 | 12 | 251 | 655 | 193 | 609 | 1.01e-17 | 87.8 |
MS.gene016758.t1 | AT5G60070 | 24.508 | 457 | 274 | 13 | 244 | 657 | 70 | 498 | 1.75e-17 | 86.7 |
MS.gene016758.t1 | AT3G09550 | 23.005 | 426 | 288 | 10 | 251 | 669 | 182 | 574 | 7.42e-17 | 85.1 |
MS.gene016758.t1 | AT3G09550 | 23.005 | 426 | 288 | 10 | 251 | 669 | 182 | 574 | 7.42e-17 | 85.1 |
MS.gene016758.t1 | AT3G09550 | 23.316 | 386 | 256 | 10 | 251 | 629 | 189 | 541 | 8.51e-17 | 84.7 |
MS.gene016758.t1 | AT5G02620 | 23.714 | 447 | 277 | 11 | 240 | 631 | 49 | 486 | 1.23e-16 | 84.0 |
MS.gene016758.t1 | AT5G02620 | 23.714 | 447 | 277 | 11 | 240 | 631 | 49 | 486 | 1.23e-16 | 84.0 |
MS.gene016758.t1 | AT1G34050 | 23.454 | 388 | 269 | 10 | 287 | 657 | 158 | 534 | 3.39e-16 | 82.8 |
MS.gene016758.t1 | AT1G07710 | 25.059 | 427 | 272 | 10 | 244 | 636 | 63 | 475 | 9.69e-16 | 81.3 |
MS.gene016758.t1 | AT1G07710 | 25.059 | 427 | 272 | 10 | 244 | 636 | 63 | 475 | 9.69e-16 | 81.3 |
MS.gene016758.t1 | AT5G54710 | 21.154 | 624 | 395 | 17 | 96 | 657 | 19 | 607 | 1.98e-15 | 80.5 |
MS.gene016758.t1 | AT1G14500 | 23.754 | 341 | 232 | 7 | 254 | 577 | 8 | 337 | 6.12e-14 | 75.1 |
MS.gene016758.t1 | AT5G54710 | 22.139 | 533 | 346 | 15 | 159 | 657 | 65 | 562 | 7.31e-14 | 75.5 |
MS.gene016758.t1 | AT2G24600 | 23.299 | 485 | 299 | 17 | 244 | 679 | 102 | 562 | 2.82e-13 | 73.6 |
MS.gene016758.t1 | AT2G24600 | 23.299 | 485 | 299 | 17 | 244 | 679 | 102 | 562 | 2.82e-13 | 73.6 |
MS.gene016758.t1 | AT1G05640 | 23.266 | 447 | 272 | 11 | 251 | 655 | 157 | 574 | 1.31e-12 | 71.6 |
MS.gene016758.t1 | AT5G51160 | 24.096 | 249 | 174 | 6 | 316 | 553 | 50 | 294 | 7.95e-12 | 68.6 |
Find 112 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGTTGGCAAATGTGTTTC+TGG | 0.117659 | 5.2:-73047881 | MS.gene016758:CDS |
CTTTACCTTGCAGTTGAAAA+TGG | 0.134927 | 5.2:-73053488 | MS.gene016758:CDS |
CTCACTATCTTTGGCTTTCA+TGG | 0.187047 | 5.2:-73047935 | MS.gene016758:CDS |
GTTCTACTATCATACTCTTT+TGG | 0.214445 | 5.2:-73048032 | MS.gene016758:CDS |
TCTGGTTGTAGCTTCAATTT+TGG | 0.221874 | 5.2:-73047863 | MS.gene016758:CDS |
CAACAGCTGTTTGGTTGTTT+TGG | 0.225543 | 5.2:+73052489 | None:intergenic |
AAAATTGTGATGCCACTTCT+TGG | 0.239970 | 5.2:-73047970 | MS.gene016758:CDS |
CGCTCTCGTCTCACTATCTT+TGG | 0.243454 | 5.2:-73047944 | MS.gene016758:CDS |
CTACTGAAGCAGTGATTATA+AGG | 0.264237 | 5.2:+73048166 | None:intergenic |
TCTGGCTTAGCAACATTGTT+GGG | 0.267728 | 5.2:+73053428 | None:intergenic |
GAAGGTGTTGTTTATTTAAC+TGG | 0.268434 | 5.2:-73052869 | MS.gene016758:CDS |
CCATATGATGCTAGATGAAT+TGG | 0.269046 | 5.2:+73052800 | None:intergenic |
CTCAATCGTTGAAATGCTAT+TGG | 0.276610 | 5.2:-73053813 | MS.gene016758:CDS |
CTATCTTTGGCTTTCATGGC+TGG | 0.314170 | 5.2:-73047931 | MS.gene016758:CDS |
ATTTAACAGACACATATAAA+AGG | 0.323577 | 5.2:-73052928 | MS.gene016758:CDS |
ACCAATCAGAGGGACAAATA+TGG | 0.331557 | 5.2:-73052830 | MS.gene016758:CDS |
AGAGAGAAAGTCACCAATTC+AGG | 0.340344 | 5.2:+73047994 | None:intergenic |
AAGGAAAAGAAAGGGGTAAT+AGG | 0.347339 | 5.2:+73047765 | None:intergenic |
GAAGTGACTGAAATTCTTCC+AGG | 0.349778 | 5.2:-73054088 | MS.gene016758:CDS |
CTCGAAGTCGAATGAGAATA+AGG | 0.351874 | 5.2:-73048286 | MS.gene016758:CDS |
CTGTTATCAGTGAACTTACT+TGG | 0.359026 | 5.2:-73047900 | MS.gene016758:CDS |
CTTCATTATGCAGCATCTAT+AGG | 0.365900 | 5.2:-73052899 | MS.gene016758:CDS |
CCGACAAACAATTTAGAGAT+AGG | 0.371005 | 5.2:-73048215 | MS.gene016758:CDS |
AAAACTTGGATTACCTGAAT+TGG | 0.382129 | 5.2:-73048007 | MS.gene016758:CDS |
CCCATATTTGTCCCTCTGAT+TGG | 0.383497 | 5.2:+73052829 | None:intergenic |
GCTTGTGAGCTCTATAAAAT+CGG | 0.390302 | 5.2:-73053578 | MS.gene016758:CDS |
TTTACCTTGCAGTTGAAAAT+GGG | 0.391614 | 5.2:-73053487 | MS.gene016758:CDS |
TCAAGCATCTCTGTGGGATC+TGG | 0.393203 | 5.2:+73052737 | None:intergenic |
ATAAATCAAAAGGATAATAA+AGG | 0.398982 | 5.2:-73052605 | MS.gene016758:CDS |
ACAGCGGGTGATAATCCTTC+TGG | 0.400924 | 5.2:+73053410 | None:intergenic |
CCAATTCATCTAGCATCATA+TGG | 0.404047 | 5.2:-73052800 | MS.gene016758:CDS |
TTCTGGCTTAGCAACATTGT+TGG | 0.414677 | 5.2:+73053427 | None:intergenic |
TGATAACTTCAACAGCTGTT+TGG | 0.417621 | 5.2:+73052480 | None:intergenic |
GAGTATGATAGTAGAACTAA+TGG | 0.419829 | 5.2:+73048038 | None:intergenic |
CAACAATATTTCTTTCTGAC+AGG | 0.429591 | 5.2:-73048240 | MS.gene016758:CDS |
GAGACATGGAGATTGCAAAA+AGG | 0.433025 | 5.2:-73054243 | None:intergenic |
TTAAATAAACAACACCTTCA+AGG | 0.442132 | 5.2:+73052873 | None:intergenic |
CTTCATGATTGCTGCTACAG+CGG | 0.448842 | 5.2:+73053394 | None:intergenic |
CCTATCTCTAAATTGTTTGT+CGG | 0.450041 | 5.2:+73048215 | None:intergenic |
AGGAGATACTCCTTTGCATC+TGG | 0.457244 | 5.2:-73052585 | MS.gene016758:CDS |
CTTGTGAGCTCTATAAAATC+GGG | 0.457732 | 5.2:-73053577 | MS.gene016758:CDS |
TGTCGTGACAAGAAGAGAAT+TGG | 0.459799 | 5.2:-73053620 | MS.gene016758:CDS |
TGATAAAATGATAAATCAAA+AGG | 0.463286 | 5.2:-73052615 | MS.gene016758:CDS |
TCAATCGTTGAAATGCTATT+GGG | 0.472210 | 5.2:-73053812 | MS.gene016758:CDS |
CCAATCAGAGGGACAAATAT+GGG | 0.480495 | 5.2:-73052829 | MS.gene016758:CDS |
TTCTCATTGTCAATAGAGCC+TGG | 0.485967 | 5.2:+73054070 | None:intergenic |
TACTACAACAGAAGCCAACT+TGG | 0.486146 | 5.2:-73052955 | MS.gene016758:CDS |
TATCAGTGAACTTACTTGGT+TGG | 0.494896 | 5.2:-73047896 | MS.gene016758:CDS |
GCATCTATAGGTTACCTTGA+AGG | 0.499660 | 5.2:-73052887 | MS.gene016758:CDS |
TCGGATAAGATAGAAGACTA+TGG | 0.504707 | 5.2:-73053728 | MS.gene016758:CDS |
CTGGCTTAGCAACATTGTTG+GGG | 0.507775 | 5.2:+73053429 | None:intergenic |
AAGTATACAGAGCTGGTTCA+AGG | 0.508593 | 5.2:-73054027 | MS.gene016758:CDS |
TGATGAAGATAATGAAAACT+TGG | 0.509544 | 5.2:+73048079 | None:intergenic |
AGAATTTCAGTCACTTCAGA+TGG | 0.509729 | 5.2:+73054094 | None:intergenic |
GTAAATGTTGCACCAATCAG+AGG | 0.511371 | 5.2:-73052841 | MS.gene016758:CDS |
GCAATCATGAAGCGGAATCA+AGG | 0.512521 | 5.2:-73053383 | MS.gene016758:intron |
GAGATATGCAAGGAAAAGAA+AGG | 0.524623 | 5.2:+73047756 | None:intergenic |
TTGAAGATGATGGGACGAAA+AGG | 0.526811 | 5.2:+73047812 | None:intergenic |
TCTCGCAGAGTCTGAGAACT+AGG | 0.527111 | 5.2:-73047737 | None:intergenic |
CTTAATCAAGTATACAGAGC+TGG | 0.529024 | 5.2:-73054034 | MS.gene016758:CDS |
GGAAGCAGTCAAAGTAATCA+TGG | 0.529658 | 5.2:-73053459 | MS.gene016758:CDS |
TTCATGATTGCTGCTACAGC+GGG | 0.530725 | 5.2:+73053395 | None:intergenic |
CATATGATGCTAGATGAATT+GGG | 0.531667 | 5.2:+73052801 | None:intergenic |
CATACCAAGCTGATATATGT+AGG | 0.537746 | 5.2:+73053945 | None:intergenic |
CTTAATTTCTGTCGAAAGAG+AGG | 0.538109 | 5.2:+73053988 | None:intergenic |
CGACAAACAATTTAGAGATA+GGG | 0.543996 | 5.2:-73048214 | MS.gene016758:CDS |
GGAGGACCTACTAAAATTTG+TGG | 0.544322 | 5.2:-73053690 | MS.gene016758:CDS |
CGTGACAAGAAGAGAATTGG+TGG | 0.545748 | 5.2:-73053617 | MS.gene016758:CDS |
TACTGAAGCAGTGATTATAA+GGG | 0.546627 | 5.2:+73048167 | None:intergenic |
CTACATATATCAGCTTGGTA+TGG | 0.548666 | 5.2:-73053944 | MS.gene016758:CDS |
CTTGGAACATTGCATGACAT+AGG | 0.549010 | 5.2:+73048097 | None:intergenic |
AGATATGCAAGGAAAAGAAA+GGG | 0.551701 | 5.2:+73047757 | None:intergenic |
CTTAACATGGGATGAAAGAG+TGG | 0.555263 | 5.2:-73052528 | MS.gene016758:CDS |
TGAAAGAGTGGATCTTCAGC+TGG | 0.558747 | 5.2:-73052516 | MS.gene016758:CDS |
TTAACCTCGAACAAAAGTGT+TGG | 0.559267 | 5.2:+73053884 | None:intergenic |
GCTGTTCCAGGTGAAGCCGA+TGG | 0.572123 | 5.2:-73048132 | MS.gene016758:CDS |
AGGGGTAATAGGAAATGAGT+CGG | 0.572589 | 5.2:+73047776 | None:intergenic |
AACAATGTTGCTAAGCCAGA+AGG | 0.572661 | 5.2:-73053425 | MS.gene016758:CDS |
ACGAGAGCGATTCCAAGAAG+TGG | 0.573148 | 5.2:+73047958 | None:intergenic |
TCTGTTAAATGTATCCAAGT+TGG | 0.575310 | 5.2:+73052941 | None:intergenic |
ATAGATGCTGCATAATGAAG+TGG | 0.581421 | 5.2:+73052902 | None:intergenic |
TCAGAGGGTTCAGCATTACT+CGG | 0.582586 | 5.2:+73048369 | None:intergenic |
GATTGTGCAGCCAGATGCAA+AGG | 0.590219 | 5.2:+73052575 | None:intergenic |
CTTCATGTTGCAGCATACCA+TGG | 0.593980 | 5.2:-73052692 | MS.gene016758:CDS |
AGTTTCCTCACTCTGTAAGA+CGG | 0.596790 | 5.2:+73054132 | None:intergenic |
TGCAGTTGAAAATGGGGACA+AGG | 0.599206 | 5.2:-73053480 | MS.gene016758:CDS |
TTACATATTGCTGCAAGAGG+TGG | 0.606317 | 5.2:-73053842 | MS.gene016758:CDS |
TGAAACCGTCTTACAGAGTG+AGG | 0.611326 | 5.2:-73054137 | MS.gene016758:CDS |
TTACCTTGCAGTTGAAAATG+GGG | 0.612809 | 5.2:-73053486 | MS.gene016758:CDS |
CTGTAGCAGCAATCATGAAG+CGG | 0.614832 | 5.2:-73053391 | MS.gene016758:CDS |
CTGTCCTACATATATCAGCT+TGG | 0.616688 | 5.2:-73053949 | MS.gene016758:CDS |
TGAAGTGTCAAGCATCTCTG+TGG | 0.624244 | 5.2:+73052730 | None:intergenic |
GTGACAAGAAGAGAATTGGT+GGG | 0.625352 | 5.2:-73053616 | MS.gene016758:CDS |
ATACAGAGCTGGTTCAAGGA+GGG | 0.625675 | 5.2:-73054023 | MS.gene016758:CDS |
GCGTTACATATTGCTGCAAG+AGG | 0.627173 | 5.2:-73053845 | MS.gene016758:CDS |
TAAATGTTGCACCAATCAGA+GGG | 0.629780 | 5.2:-73052840 | MS.gene016758:CDS |
CAGACTCTGCGAGATATGCA+AGG | 0.631860 | 5.2:+73047746 | None:intergenic |
AGGAAACACTATGTTTCATG+AGG | 0.632079 | 5.2:-73053651 | MS.gene016758:CDS |
TCGGGGATTCATCGTCAAAG+TGG | 0.632120 | 5.2:-73053559 | MS.gene016758:CDS |
TAGGGTAGAGACACTCACAT+TGG | 0.634002 | 5.2:-73048196 | MS.gene016758:CDS |
GAAGTGTCAAGCATCTCTGT+GGG | 0.635125 | 5.2:+73052731 | None:intergenic |
TGTGTAATCAGAAATGCTGA+AGG | 0.641467 | 5.2:-73052981 | MS.gene016758:intron |
GTAATAGGAAATGAGTCGGA+AGG | 0.642076 | 5.2:+73047780 | None:intergenic |
AGCATCATATGGTGGCCATG+TGG | 0.648207 | 5.2:-73052789 | MS.gene016758:CDS |
TGACAAGAAGAGAATTGGTG+GGG | 0.649870 | 5.2:-73053615 | MS.gene016758:CDS |
TTAAAGTCGAATAAGAACAA+AGG | 0.662129 | 5.2:-73048318 | MS.gene016758:CDS |
TTGTGAGCTCTATAAAATCG+GGG | 0.668499 | 5.2:-73053576 | MS.gene016758:CDS |
AGCATACCATGGAAAACATG+AGG | 0.680010 | 5.2:-73052681 | MS.gene016758:CDS |
TATACAGAGCTGGTTCAAGG+AGG | 0.681826 | 5.2:-73054024 | MS.gene016758:CDS |
ATTCATCTAGCATCATATGG+TGG | 0.697537 | 5.2:-73052797 | MS.gene016758:CDS |
GATATGCAAGGAAAAGAAAG+GGG | 0.702065 | 5.2:+73047758 | None:intergenic |
ACTTCTCTACTACTTCCACA+TGG | 0.734547 | 5.2:+73052774 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATTATATGGTATATTA+TGG | + | chr5.2:73051707-73051726 | None:intergenic | 10.0% |
!! | AAATTTATGAAAAATATGTA+TGG | + | chr5.2:73051761-73051780 | None:intergenic | 10.0% |
!! | ATCATAGTTAAAAAAATTAT+TGG | - | chr5.2:73048875-73048894 | MS.gene016758:intron | 10.0% |
!! | CTAAATAATATAAAATTGAT+GGG | + | chr5.2:73051015-73051034 | None:intergenic | 10.0% |
!!! | AGAATTTTATAACATTTAAT+TGG | + | chr5.2:73049763-73049782 | None:intergenic | 10.0% |
!!! | ATATACCATATAATATTTTA+TGG | - | chr5.2:73051709-73051728 | MS.gene016758:intron | 10.0% |
!!! | GTATTATTATTTTAATACAA+TGG | - | chr5.2:73051676-73051695 | MS.gene016758:intron | 10.0% |
!!! | GTTCTTTTTTTTTTTTTTTT+TGG | - | chr5.2:73048774-73048793 | MS.gene016758:intron | 10.0% |
!! | AAACTAAAGATATAACAAAA+AGG | - | chr5.2:73051916-73051935 | MS.gene016758:intron | 15.0% |
!! | ACTTATATATTTATTCTCAT+TGG | - | chr5.2:73051387-73051406 | MS.gene016758:intron | 15.0% |
!! | ACTTCAAATTATAATCAATA+TGG | + | chr5.2:73049618-73049637 | None:intergenic | 15.0% |
!! | AGATACCATAAAATATTATA+TGG | + | chr5.2:73051717-73051736 | None:intergenic | 15.0% |
!! | ATAAATCAAAAGGATAATAA+AGG | - | chr5.2:73049371-73049390 | MS.gene016758:intron | 15.0% |
!! | ATTTCAAAAGTTAAACTAAA+AGG | - | chr5.2:73050617-73050636 | MS.gene016758:intron | 15.0% |
!! | CTTCAAATTATAATCAATAT+GGG | + | chr5.2:73049617-73049636 | None:intergenic | 15.0% |
!! | GCTAAATAATATAAAATTGA+TGG | + | chr5.2:73051016-73051035 | None:intergenic | 15.0% |
!! | TAAATAACTAACAAATTTAG+TGG | - | chr5.2:73052503-73052522 | MS.gene016758:CDS | 15.0% |
!! | TGATAAAATGATAAATCAAA+AGG | - | chr5.2:73049361-73049380 | MS.gene016758:intron | 15.0% |
!! | TGTGTTACATATAATATAAA+AGG | + | chr5.2:73049847-73049866 | None:intergenic | 15.0% |
!! | TTAGTTAAAAATTAACTGAA+TGG | + | chr5.2:73049677-73049696 | None:intergenic | 15.0% |
!!! | AAAAAATATTTTTGTATCAG+AGG | + | chr5.2:73047802-73047821 | None:intergenic | 15.0% |
!!! | AAAAATATTTTTGTATCAGA+GGG | + | chr5.2:73047801-73047820 | None:intergenic | 15.0% |
!!! | AAATACACTTTTAAATCATA+AGG | - | chr5.2:73052054-73052073 | MS.gene016758:intron | 15.0% |
!!! | TTTGTATTATTTTGATACAA+AGG | - | chr5.2:73051430-73051449 | MS.gene016758:intron | 15.0% |
!! | AACATGAATGTAAAAAGATA+AGG | + | chr5.2:73048696-73048715 | None:intergenic | 20.0% |
!! | ATGAGATATTGTTTACAAAA+TGG | + | chr5.2:73051461-73051480 | None:intergenic | 20.0% |
!! | ATTAAAGAGAATAAACAAGA+GGG | - | chr5.2:73049996-73050015 | MS.gene016758:intron | 20.0% |
!! | ATTCATTTCTATCTGATATA+AGG | - | chr5.2:73051803-73051822 | MS.gene016758:intron | 20.0% |
!! | ATTTAACAGACACATATAAA+AGG | - | chr5.2:73049048-73049067 | MS.gene016758:intron | 20.0% |
!! | CAAGTCTATAAAAATAAACT+CGG | - | chr5.2:73051296-73051315 | MS.gene016758:intron | 20.0% |
!! | CAATTGAATAGCTATTATTA+AGG | + | chr5.2:73050469-73050488 | None:intergenic | 20.0% |
!! | TATATCAGATAGAAATGAAT+TGG | + | chr5.2:73051803-73051822 | None:intergenic | 20.0% |
!! | TATTAAAGAGAATAAACAAG+AGG | - | chr5.2:73049995-73050014 | MS.gene016758:intron | 20.0% |
!! | TTAAGATTGTTGCAAAAATT+AGG | - | chr5.2:73052849-73052868 | MS.gene016758:CDS | 20.0% |
!! | TTTACAATGTTATAATGAGA+TGG | - | chr5.2:73051983-73052002 | MS.gene016758:intron | 20.0% |
!!! | AGAGCATATTTACAAATTTT+TGG | - | chr5.2:73052435-73052454 | MS.gene016758:intron | 20.0% |
!!! | AGTTTAACTTTTGAAATATG+TGG | + | chr5.2:73050614-73050633 | None:intergenic | 20.0% |
!!! | ATACTAATCATTTGATTTCA+TGG | + | chr5.2:73048736-73048755 | None:intergenic | 20.0% |
!!! | GTTTAACTTTTGAAATATGT+GGG | + | chr5.2:73050613-73050632 | None:intergenic | 20.0% |
!!! | TAATTTTTGCAACAATCTTA+AGG | + | chr5.2:73052850-73052869 | None:intergenic | 20.0% |
!!! | TCAAAAATATTGACTTTCTT+GGG | + | chr5.2:73050297-73050316 | None:intergenic | 20.0% |
!!! | TCAGTAATACACATTATTTT+AGG | - | chr5.2:73047772-73047791 | MS.gene016758:CDS | 20.0% |
!!! | TGTTATATCTTTAGTTTTCT+TGG | + | chr5.2:73051913-73051932 | None:intergenic | 20.0% |
!!! | TTAACTGAATGGTTAATTTT+TGG | + | chr5.2:73049666-73049685 | None:intergenic | 20.0% |
!!! | TTGGATTTATTTTTCCATTA+TGG | + | chr5.2:73051627-73051646 | None:intergenic | 20.0% |
!!! | TTGGTTTTGTTGTAATTTTT+GGG | + | chr5.2:73053525-73053544 | None:intergenic | 20.0% |
!!! | TTTAACTTTTGAAATATGTG+GGG | + | chr5.2:73050612-73050631 | None:intergenic | 20.0% |
!!! | TTTTAACTATGATTGAAACT+CGG | + | chr5.2:73048868-73048887 | None:intergenic | 20.0% |
! | AAAGAAAATATAACTGCCTT+TGG | - | chr5.2:73050499-73050518 | MS.gene016758:intron | 25.0% |
! | AAATATGTATGGTAGAATCA+TGG | + | chr5.2:73051750-73051769 | None:intergenic | 25.0% |
! | AATGGCTAACACTTATTTAA+AGG | + | chr5.2:73051877-73051896 | None:intergenic | 25.0% |
! | AATGTAAAAAGATAAGGCAT+AGG | + | chr5.2:73048690-73048709 | None:intergenic | 25.0% |
! | ACTATGGTGAAAAATCAAAT+GGG | - | chr5.2:73048264-73048283 | MS.gene016758:CDS | 25.0% |
! | ACTTATCTTTCTTGAAATTG+CGG | - | chr5.2:73050030-73050049 | MS.gene016758:intron | 25.0% |
! | AGGTAATAAATTTACTCATG+TGG | - | chr5.2:73048613-73048632 | MS.gene016758:intron | 25.0% |
! | AGTAGACATGCAATATATTA+TGG | + | chr5.2:73051502-73051521 | None:intergenic | 25.0% |
! | ATCAAATGATTAGTATCAAG+TGG | - | chr5.2:73048740-73048759 | MS.gene016758:intron | 25.0% |
! | CAAAAATTACAACAAAACCA+AGG | - | chr5.2:73053524-73053543 | MS.gene016758:CDS | 25.0% |
! | CATTGTAAAACTTTGCATTT+AGG | + | chr5.2:73051972-73051991 | None:intergenic | 25.0% |
! | CTTAAAAGGAGTTTAATATC+AGG | - | chr5.2:73049729-73049748 | MS.gene016758:intron | 25.0% |
! | CTTATTAACATGTGTATGTA+TGG | + | chr5.2:73052119-73052138 | None:intergenic | 25.0% |
! | GATAAATTTCAGTAGTTGTT+GGG | - | chr5.2:73048635-73048654 | MS.gene016758:intron | 25.0% |
! | GTCAATATTTGTGAATTAAG+CGG | + | chr5.2:73051241-73051260 | None:intergenic | 25.0% |
! | GTTAAGTAAAAAACAGCTTT+GGG | + | chr5.2:73049434-73049453 | None:intergenic | 25.0% |
! | TAAAACCTGTTGCAAAAATT+AGG | - | chr5.2:73049917-73049936 | MS.gene016758:intron | 25.0% |
! | TACATACACATGTTAATAAG+TGG | - | chr5.2:73052119-73052138 | MS.gene016758:intron | 25.0% |
! | TATAATGAGATGGCATAAAA+AGG | - | chr5.2:73051993-73052012 | MS.gene016758:intron | 25.0% |
! | TATAGACTTGATGAAATAAG+AGG | + | chr5.2:73051286-73051305 | None:intergenic | 25.0% |
! | TGATGAAGATAATGAAAACT+TGG | + | chr5.2:73053900-73053919 | None:intergenic | 25.0% |
! | TGTGTGGATTTATATTATAC+AGG | - | chr5.2:73051569-73051588 | MS.gene016758:intron | 25.0% |
! | TGTTAAGTAAAAAACAGCTT+TGG | + | chr5.2:73049435-73049454 | None:intergenic | 25.0% |
! | TTAAAGTCGAATAAGAACAA+AGG | - | chr5.2:73053658-73053677 | MS.gene016758:CDS | 25.0% |
! | TTAAATAAACAACACCTTCA+AGG | + | chr5.2:73049106-73049125 | None:intergenic | 25.0% |
! | TTAAATCAGTTTGCAAAAGA+TGG | + | chr5.2:73052801-73052820 | None:intergenic | 25.0% |
! | TTATATAACGGTTTAGTGTT+TGG | + | chr5.2:73050124-73050143 | None:intergenic | 25.0% |
! | TTTAACTATGATTGAAACTC+GGG | + | chr5.2:73048867-73048886 | None:intergenic | 25.0% |
! | TTTCCTATAGTGTATGATAA+TGG | + | chr5.2:73051048-73051067 | None:intergenic | 25.0% |
!! | AAAGTTATATTTTCCCAATG+TGG | + | chr5.2:73051550-73051569 | None:intergenic | 25.0% |
!! | AAGTTATATTTTCCCAATGT+GGG | + | chr5.2:73051549-73051568 | None:intergenic | 25.0% |
!! | ACACAAAAATCATGTTTTGT+AGG | - | chr5.2:73052567-73052586 | MS.gene016758:CDS | 25.0% |
!! | ATCTTTTTACGGAAACAAAT+AGG | + | chr5.2:73050395-73050414 | None:intergenic | 25.0% |
!! | CAATTTTCGACAAACTTAAA+AGG | - | chr5.2:73049715-73049734 | MS.gene016758:intron | 25.0% |
!! | CACAAAAATCATGTTTTGTA+GGG | - | chr5.2:73052568-73052587 | MS.gene016758:CDS | 25.0% |
!! | GAGCTTATGCTAATTTTAAA+CGG | - | chr5.2:73048186-73048205 | MS.gene016758:CDS | 25.0% |
!! | TCTTTTTACGGAAACAAATA+GGG | + | chr5.2:73050394-73050413 | None:intergenic | 25.0% |
!! | TTATTCCTAATTTTTGCAAC+AGG | + | chr5.2:73049925-73049944 | None:intergenic | 25.0% |
!! | TTCTACTATCATACTCTTTT+GGG | - | chr5.2:73053945-73053964 | MS.gene016758:CDS | 25.0% |
!!! | AAAGTATTGATTGTTTTGCA+TGG | + | chr5.2:73048472-73048491 | None:intergenic | 25.0% |
!!! | AAATTTTTCTAAGAGTACCT+TGG | + | chr5.2:73052544-73052563 | None:intergenic | 25.0% |
!!! | AAGCTGTTTTTTACTTAACA+TGG | - | chr5.2:73049435-73049454 | MS.gene016758:intron | 25.0% |
!!! | ACCAATTTTGTTTATCGTTT+TGG | - | chr5.2:73050328-73050347 | MS.gene016758:intron | 25.0% |
!!! | AGAAAGTCAATATTTTTGAG+AGG | - | chr5.2:73050298-73050317 | MS.gene016758:intron | 25.0% |
!!! | AGCTGTTTTTTACTTAACAT+GGG | - | chr5.2:73049436-73049455 | MS.gene016758:intron | 25.0% |
!!! | ATTTTTTGGTTGAAGATGAT+GGG | + | chr5.2:73054176-73054195 | None:intergenic | 25.0% |
!!! | CCAATTTTGTTTATCGTTTT+GGG | - | chr5.2:73050329-73050348 | MS.gene016758:intron | 25.0% |
!!! | CTCAAAAATATTGACTTTCT+TGG | + | chr5.2:73050298-73050317 | None:intergenic | 25.0% |
!!! | CTTGGTTTTGTTGTAATTTT+TGG | + | chr5.2:73053526-73053545 | None:intergenic | 25.0% |
!!! | TTAACTTTTGAAATATGTGG+GGG | + | chr5.2:73050611-73050630 | None:intergenic | 25.0% |
!!! | TTTACAAATTTTTGGCAAAC+AGG | - | chr5.2:73052443-73052462 | MS.gene016758:intron | 25.0% |
!!! | TTTTGGCTAAAAATCAATCT+TGG | + | chr5.2:73049649-73049668 | None:intergenic | 25.0% |
AAAACTTGGATTACCTGAAT+TGG | - | chr5.2:73053969-73053988 | MS.gene016758:CDS | 30.0% | |
AAGTGACAACAATTCCATAA+TGG | - | chr5.2:73051610-73051629 | MS.gene016758:intron | 30.0% | |
AATTTACCCACAATTCTTCA+AGG | - | chr5.2:73048660-73048679 | MS.gene016758:intron | 30.0% | |
AGATATGCAAGGAAAAGAAA+GGG | + | chr5.2:73054222-73054241 | None:intergenic | 30.0% | |
ATTTACCCACAATTCTTCAA+GGG | - | chr5.2:73048661-73048680 | MS.gene016758:intron | 30.0% | |
CAACAATATTTCTTTCTGAC+AGG | - | chr5.2:73053736-73053755 | MS.gene016758:CDS | 30.0% | |
CATATGATGCTAGATGAATT+GGG | + | chr5.2:73049178-73049197 | None:intergenic | 30.0% | |
CATCCATTATCATACACTAT+AGG | - | chr5.2:73051042-73051061 | MS.gene016758:intron | 30.0% | |
CCCAAAACGATAAACAAAAT+TGG | + | chr5.2:73050332-73050351 | None:intergenic | 30.0% | |
CCCTTAAAATCATTGAGAAA+GGG | + | chr5.2:73052618-73052637 | None:intergenic | 30.0% | |
CCTATCTCTAAATTGTTTGT+CGG | + | chr5.2:73053764-73053783 | None:intergenic | 30.0% | |
CGACAAACAATTTAGAGATA+GGG | - | chr5.2:73053762-73053781 | MS.gene016758:CDS | 30.0% | |
CTAAACCGTTATATAACATG+AGG | - | chr5.2:73050128-73050147 | MS.gene016758:intron | 30.0% | |
CTATGGTGAAAAATCAAATG+GGG | - | chr5.2:73048265-73048284 | MS.gene016758:CDS | 30.0% | |
CTTGGTTATATGTTGCTAAA+TGG | + | chr5.2:73051895-73051914 | None:intergenic | 30.0% | |
GACTATGGTGAAAAATCAAA+TGG | - | chr5.2:73048263-73048282 | MS.gene016758:CDS | 30.0% | |
GAGTATGATAGTAGAACTAA+TGG | + | chr5.2:73053941-73053960 | None:intergenic | 30.0% | |
GGATAAATTTCAGTAGTTGT+TGG | - | chr5.2:73048634-73048653 | MS.gene016758:intron | 30.0% | |
GTTAGAACACACAAAAAGAT+CGG | - | chr5.2:73048229-73048248 | MS.gene016758:CDS | 30.0% | |
TAAACGGCACGATATAAAAA+AGG | - | chr5.2:73048202-73048221 | MS.gene016758:CDS | 30.0% | |
TACTGAAGCAGTGATTATAA+GGG | + | chr5.2:73053812-73053831 | None:intergenic | 30.0% | |
TCAATCGTTGAAATGCTATT+GGG | - | chr5.2:73048164-73048183 | MS.gene016758:CDS | 30.0% | |
TCCCTTAAAATCATTGAGAA+AGG | + | chr5.2:73052619-73052638 | None:intergenic | 30.0% | |
TCTGTTAAATGTATCCAAGT+TGG | + | chr5.2:73049038-73049057 | None:intergenic | 30.0% | |
TGATTGTAGTATACACTAGA+TGG | + | chr5.2:73050942-73050961 | None:intergenic | 30.0% | |
TGGGAAAATATAACTTTGTG+TGG | - | chr5.2:73051553-73051572 | MS.gene016758:intron | 30.0% | |
TTCACATCAATTTAGATGTC+AGG | - | chr5.2:73051850-73051869 | MS.gene016758:intron | 30.0% | |
TTCATTGATAAAGCATGATG+TGG | + | chr5.2:73052671-73052690 | None:intergenic | 30.0% | |
TTTACCTTGCAGTTGAAAAT+GGG | - | chr5.2:73048489-73048508 | MS.gene016758:intron | 30.0% | |
! | AAGGTTAAAAAGAGTTTTCC+TGG | - | chr5.2:73050636-73050655 | MS.gene016758:intron | 30.0% |
! | ACCCTTTCTCAATGATTTTA+AGG | - | chr5.2:73052614-73052633 | MS.gene016758:CDS | 30.0% |
! | AGGTTAAAAAGAGTTTTCCT+GGG | - | chr5.2:73050637-73050656 | MS.gene016758:intron | 30.0% |
! | AGTTATATTTTCCCAATGTG+GGG | + | chr5.2:73051548-73051567 | None:intergenic | 30.0% |
! | ATCATGTTTTGTAGGGTATA+AGG | - | chr5.2:73052575-73052594 | MS.gene016758:CDS | 30.0% |
! | CCCTTTCTCAATGATTTTAA+GGG | - | chr5.2:73052615-73052634 | MS.gene016758:CDS | 30.0% |
! | CTTTTTACGGAAACAAATAG+GGG | + | chr5.2:73050393-73050412 | None:intergenic | 30.0% |
! | GTTCTACTATCATACTCTTT+TGG | - | chr5.2:73053944-73053963 | MS.gene016758:CDS | 30.0% |
! | TATGTATGGAAGTGTATGTA+TGG | + | chr5.2:73052105-73052124 | None:intergenic | 30.0% |
! | TTTTTCTTGCTACTGATCAA+AGG | - | chr5.2:73050362-73050381 | MS.gene016758:intron | 30.0% |
!! | AATATTTTTGTATCAGAGGG+AGG | + | chr5.2:73047798-73047817 | None:intergenic | 30.0% |
!! | ATGTCGACTCCAATTTATAA+GGG | - | chr5.2:73048917-73048936 | MS.gene016758:intron | 30.0% |
!! | GAAGGTGTTGTTTATTTAAC+TGG | - | chr5.2:73049107-73049126 | MS.gene016758:intron | 30.0% |
!!! | ACTTTCCACTTTTTGTTGTT+TGG | + | chr5.2:73053635-73053654 | None:intergenic | 30.0% |
!!! | GATTTTTTGGTTGAAGATGA+TGG | + | chr5.2:73054177-73054196 | None:intergenic | 30.0% |
!!! | GGATAGTTGTGTATTTTTTG+TGG | + | chr5.2:73052336-73052355 | None:intergenic | 30.0% |
AAAATCATTGAGAAAGGGTC+AGG | + | chr5.2:73052613-73052632 | None:intergenic | 35.0% | |
AAGGAAAAGAAAGGGGTAAT+AGG | + | chr5.2:73054214-73054233 | None:intergenic | 35.0% | |
ACATCGTAGATGTAATGCAT+CGG | - | chr5.2:73050663-73050682 | MS.gene016758:intron | 35.0% | |
ACATGATGTCATGAATCAGT+TGG | + | chr5.2:73052178-73052197 | None:intergenic | 35.0% | |
ACTCGAATACGACAAGTAAT+GGG | + | chr5.2:73051167-73051186 | None:intergenic | 35.0% | |
AGAATTTCAGTCACTTCAGA+TGG | + | chr5.2:73047885-73047904 | None:intergenic | 35.0% | |
AGACTTAACACACAGTGAAT+TGG | - | chr5.2:73050725-73050744 | MS.gene016758:intron | 35.0% | |
AGGAAACACTATGTTTCATG+AGG | - | chr5.2:73048325-73048344 | MS.gene016758:CDS | 35.0% | |
ATAAATTGGAGTCGACATGA+AGG | + | chr5.2:73048915-73048934 | None:intergenic | 35.0% | |
ATAGATGCTGCATAATGAAG+TGG | + | chr5.2:73049077-73049096 | None:intergenic | 35.0% | |
ATATGCTCTTAGTGTACTAG+TGG | + | chr5.2:73052424-73052443 | None:intergenic | 35.0% | |
ATCCGTATATAAAACCCCTT+GGG | + | chr5.2:73051218-73051237 | None:intergenic | 35.0% | |
ATGATTACCATAAGCCCTTA+TGG | + | chr5.2:73050973-73050992 | None:intergenic | 35.0% | |
ATTCATCTAGCATCATATGG+TGG | - | chr5.2:73049179-73049198 | MS.gene016758:intron | 35.0% | |
ATTGATAAAGCATGATGTGG+TGG | + | chr5.2:73052668-73052687 | None:intergenic | 35.0% | |
CATACCAAGCTGATATATGT+AGG | + | chr5.2:73048034-73048053 | None:intergenic | 35.0% | |
CCAATTCATCTAGCATCATA+TGG | - | chr5.2:73049176-73049195 | MS.gene016758:intron | 35.0% | |
CCATATGATGCTAGATGAAT+TGG | + | chr5.2:73049179-73049198 | None:intergenic | 35.0% | |
CCGACAAACAATTTAGAGAT+AGG | - | chr5.2:73053761-73053780 | MS.gene016758:CDS | 35.0% | |
CTACATATATCAGCTTGGTA+TGG | - | chr5.2:73048032-73048051 | MS.gene016758:CDS | 35.0% | |
CTACTGAAGCAGTGATTATA+AGG | + | chr5.2:73053813-73053832 | None:intergenic | 35.0% | |
CTCAATCGTTGAAATGCTAT+TGG | - | chr5.2:73048163-73048182 | MS.gene016758:CDS | 35.0% | |
CTCTGATGTGATTCATATCA+GGG | + | chr5.2:73050228-73050247 | None:intergenic | 35.0% | |
CTGTTATCAGTGAACTTACT+TGG | - | chr5.2:73054076-73054095 | MS.gene016758:CDS | 35.0% | |
CTTAATCAAGTATACAGAGC+TGG | - | chr5.2:73047942-73047961 | MS.gene016758:CDS | 35.0% | |
CTTAATTTCTGTCGAAAGAG+AGG | + | chr5.2:73047991-73048010 | None:intergenic | 35.0% | |
CTTCATTATGCAGCATCTAT+AGG | - | chr5.2:73049077-73049096 | MS.gene016758:intron | 35.0% | |
CTTGTGAGCTCTATAAAATC+GGG | - | chr5.2:73048399-73048418 | MS.gene016758:intron | 35.0% | |
CTTTACCTTGCAGTTGAAAA+TGG | - | chr5.2:73048488-73048507 | MS.gene016758:intron | 35.0% | |
GAATCTATCTCAAAGATAGC+AGG | - | chr5.2:73050263-73050282 | MS.gene016758:intron | 35.0% | |
GAGATATGCAAGGAAAAGAA+AGG | + | chr5.2:73054223-73054242 | None:intergenic | 35.0% | |
GAGTCCAAATTCAAGATCAT+TGG | - | chr5.2:73052757-73052776 | MS.gene016758:CDS | 35.0% | |
GATATGCAAGGAAAAGAAAG+GGG | + | chr5.2:73054221-73054240 | None:intergenic | 35.0% | |
GCTTGTGAGCTCTATAAAAT+CGG | - | chr5.2:73048398-73048417 | MS.gene016758:intron | 35.0% | |
TAAATGTTGCACCAATCAGA+GGG | - | chr5.2:73049136-73049155 | MS.gene016758:intron | 35.0% | |
TAGAAGACGCCCTTATAAAT+TGG | + | chr5.2:73048929-73048948 | None:intergenic | 35.0% | |
TATCAGTGAACTTACTTGGT+TGG | - | chr5.2:73054080-73054099 | MS.gene016758:CDS | 35.0% | |
TCACGCCTCATGTTATATAA+CGG | + | chr5.2:73050136-73050155 | None:intergenic | 35.0% | |
TCAGTGTATCAACAACAATG+AGG | - | chr5.2:73052360-73052379 | MS.gene016758:intron | 35.0% | |
TCGGATAAGATAGAAGACTA+TGG | - | chr5.2:73048248-73048267 | MS.gene016758:CDS | 35.0% | |
TGACACCAAACAACAAAAAG+TGG | - | chr5.2:73053627-73053646 | MS.gene016758:CDS | 35.0% | |
TGATAACTTCAACAGCTGTT+TGG | + | chr5.2:73049499-73049518 | None:intergenic | 35.0% | |
TGATTACCATAAGCCCTTAT+GGG | + | chr5.2:73050972-73050991 | None:intergenic | 35.0% | |
TGTGTAATCAGAAATGCTGA+AGG | - | chr5.2:73048995-73049014 | MS.gene016758:intron | 35.0% | |
TTACCTTGCAGTTGAAAATG+GGG | - | chr5.2:73048490-73048509 | MS.gene016758:intron | 35.0% | |
TTACTTGTTTACTGAGCCAA+AGG | + | chr5.2:73050518-73050537 | None:intergenic | 35.0% | |
TTCCCTAAATTTCTTCCCAA+GGG | - | chr5.2:73051200-73051219 | MS.gene016758:intron | 35.0% | |
TTGCATACAACAAGTGTCTT+GGG | + | chr5.2:73050768-73050787 | None:intergenic | 35.0% | |
TTGGCAGATTATCACTTTCA+TGG | + | chr5.2:73050105-73050124 | None:intergenic | 35.0% | |
TTGTGAGCTCTATAAAATCG+GGG | - | chr5.2:73048400-73048419 | MS.gene016758:intron | 35.0% | |
TTTCCCTAAATTTCTTCCCA+AGG | - | chr5.2:73051199-73051218 | MS.gene016758:intron | 35.0% | |
! | AAAATTGTGATGCCACTTCT+TGG | - | chr5.2:73054006-73054025 | MS.gene016758:CDS | 35.0% |
! | ATACTCTTTTGGGCAAAACT+TGG | - | chr5.2:73053955-73053974 | MS.gene016758:CDS | 35.0% |
! | GGGGGATTGTTGTAATTTTT+GGG | + | chr5.2:73050593-73050612 | None:intergenic | 35.0% |
! | GTGTTAAGTCTCATTAGTCT+AGG | + | chr5.2:73050716-73050735 | None:intergenic | 35.0% |
! | GTTATATTTTCCCAATGTGG+GGG | + | chr5.2:73051547-73051566 | None:intergenic | 35.0% |
! | TAAGTCTCATTAGTCTAGGA+CGG | + | chr5.2:73050712-73050731 | None:intergenic | 35.0% |
! | TCTGGTTGTAGCTTCAATTT+TGG | - | chr5.2:73054113-73054132 | MS.gene016758:CDS | 35.0% |
! | TGAATTGGTTTAGCAAGCTA+TGG | - | chr5.2:73050740-73050759 | MS.gene016758:intron | 35.0% |
! | TGGGGGATTGTTGTAATTTT+TGG | + | chr5.2:73050594-73050613 | None:intergenic | 35.0% |
! | TTAACCTCGAACAAAAGTGT+TGG | + | chr5.2:73048095-73048114 | None:intergenic | 35.0% |
!! | CATGTCGACTCCAATTTATA+AGG | - | chr5.2:73048916-73048935 | MS.gene016758:intron | 35.0% |
!! | TAGGTTGTTTGCTTTTCCAT+CGG | + | chr5.2:73053863-73053882 | None:intergenic | 35.0% |
!! | TCAGTGCCACAAATTTTAGT+AGG | + | chr5.2:73048295-73048314 | None:intergenic | 35.0% |
!! | TTCCCAAGGGGTTTTATATA+CGG | - | chr5.2:73051213-73051232 | MS.gene016758:intron | 35.0% |
!!! | AATGAGTCGGAAGGATTTTT+TGG | + | chr5.2:73054190-73054209 | None:intergenic | 35.0% |
!!! | TTTGTTTATCGTTTTGGGAG+AGG | - | chr5.2:73050334-73050353 | MS.gene016758:intron | 35.0% |
!!! | TTTTGTTGTTTGGTGTCAGA+GGG | + | chr5.2:73053625-73053644 | None:intergenic | 35.0% |
!!! | TTTTTGTTGTTTGGTGTCAG+AGG | + | chr5.2:73053626-73053645 | None:intergenic | 35.0% |
AAAACCAAGGTTGAGAAGGT+TGG | - | chr5.2:73053537-73053556 | MS.gene016758:CDS | 40.0% | |
AACAATGTTGCTAAGCCAGA+AGG | - | chr5.2:73048551-73048570 | MS.gene016758:intron | 40.0% | |
AACCCCTTGGGAAGAAATTT+AGG | + | chr5.2:73051206-73051225 | None:intergenic | 40.0% | |
AATTCTACATACCTCTCTGG+CGG | + | chr5.2:73049549-73049568 | None:intergenic | 40.0% | |
ACAATCATACACCACCCATA+AGG | - | chr5.2:73050955-73050974 | MS.gene016758:intron | 40.0% | |
ACCAATCAGAGGGACAAATA+TGG | - | chr5.2:73049146-73049165 | MS.gene016758:intron | 40.0% | |
ACCAATTCTACATACCTCTC+TGG | + | chr5.2:73049552-73049571 | None:intergenic | 40.0% | |
ACCCATTGAACCTTCTTCAT+GGG | - | chr5.2:73051117-73051136 | MS.gene016758:intron | 40.0% | |
ACCCCTTGGGAAGAAATTTA+GGG | + | chr5.2:73051205-73051224 | None:intergenic | 40.0% | |
ACCTATATGAGTGTCAAGTG+GGG | + | chr5.2:73050915-73050934 | None:intergenic | 40.0% | |
ACTTCTCTACTACTTCCACA+TGG | + | chr5.2:73049205-73049224 | None:intergenic | 40.0% | |
AGAGAGAAAGTCACCAATTC+AGG | + | chr5.2:73053985-73054004 | None:intergenic | 40.0% | |
AGCATACCATGGAAAACATG+AGG | - | chr5.2:73049295-73049314 | MS.gene016758:intron | 40.0% | |
AGCTATTCAATTGTGCACGT+TGG | - | chr5.2:73050476-73050495 | MS.gene016758:intron | 40.0% | |
AGGGGTAATAGGAAATGAGT+CGG | + | chr5.2:73054203-73054222 | None:intergenic | 40.0% | |
AGTTTCCTCACTCTGTAAGA+CGG | + | chr5.2:73047847-73047866 | None:intergenic | 40.0% | |
ATCCCATGAAGAAGGTTCAA+TGG | + | chr5.2:73051122-73051141 | None:intergenic | 40.0% | |
ATGAGGCGGATAAATCCTTA+AGG | + | chr5.2:73050171-73050190 | None:intergenic | 40.0% | |
CAACAAAACCAAGGTTGAGA+AGG | - | chr5.2:73053533-73053552 | MS.gene016758:CDS | 40.0% | |
CAATCATACACCACCCATAA+GGG | - | chr5.2:73050956-73050975 | MS.gene016758:intron | 40.0% | |
CACCTATATGAGTGTCAAGT+GGG | + | chr5.2:73050916-73050935 | None:intergenic | 40.0% | |
CACTCGAATACGACAAGTAA+TGG | + | chr5.2:73051168-73051187 | None:intergenic | 40.0% | |
CATTACTTGTCGTATTCGAG+TGG | - | chr5.2:73051166-73051185 | MS.gene016758:intron | 40.0% | |
CCAATCAGAGGGACAAATAT+GGG | - | chr5.2:73049147-73049166 | MS.gene016758:intron | 40.0% | |
CCTCTGATGTGATTCATATC+AGG | + | chr5.2:73050229-73050248 | None:intergenic | 40.0% | |
CCTGATATGAATCACATCAG+AGG | - | chr5.2:73050226-73050245 | MS.gene016758:intron | 40.0% | |
CTCGAAGTCGAATGAGAATA+AGG | - | chr5.2:73053690-73053709 | MS.gene016758:CDS | 40.0% | |
CTGTCCTACATATATCAGCT+TGG | - | chr5.2:73048027-73048046 | MS.gene016758:CDS | 40.0% | |
CTTAACATGGGATGAAAGAG+TGG | - | chr5.2:73049448-73049467 | MS.gene016758:intron | 40.0% | |
CTTGCATACAACAAGTGTCT+TGG | + | chr5.2:73050769-73050788 | None:intergenic | 40.0% | |
CTTGGAACATTGCATGACAT+AGG | + | chr5.2:73053882-73053901 | None:intergenic | 40.0% | |
GAAGTGACTGAAATTCTTCC+AGG | - | chr5.2:73047888-73047907 | MS.gene016758:CDS | 40.0% | |
GATCCGTATATAAAACCCCT+TGG | + | chr5.2:73051219-73051238 | None:intergenic | 40.0% | |
GATCTCCAATCACAAAGGTT+GGG | - | chr5.2:73051139-73051158 | MS.gene016758:intron | 40.0% | |
GATCTTGAATTTGGACTCTG+AGG | + | chr5.2:73052755-73052774 | None:intergenic | 40.0% | |
GATGGAGAAAATGATCAGAG+TGG | + | chr5.2:73052783-73052802 | None:intergenic | 40.0% | |
GCATCTATAGGTTACCTTGA+AGG | - | chr5.2:73049089-73049108 | MS.gene016758:intron | 40.0% | |
GGAAGAACATGTTGTATCCT+GGG | + | chr5.2:73050207-73050226 | None:intergenic | 40.0% | |
GGAAGCAGTCAAAGTAATCA+TGG | - | chr5.2:73048517-73048536 | MS.gene016758:intron | 40.0% | |
GGAGGACCTACTAAAATTTG+TGG | - | chr5.2:73048286-73048305 | MS.gene016758:CDS | 40.0% | |
GGCACGATATAAAAAAGGCA+TGG | - | chr5.2:73048207-73048226 | MS.gene016758:CDS | 40.0% | |
GTAAATGTTGCACCAATCAG+AGG | - | chr5.2:73049135-73049154 | MS.gene016758:intron | 40.0% | |
GTAATAGGAAATGAGTCGGA+AGG | + | chr5.2:73054199-73054218 | None:intergenic | 40.0% | |
GTAGATGTAATGCATCGGAA+CGG | - | chr5.2:73050668-73050687 | MS.gene016758:intron | 40.0% | |
GTGACAAGAAGAGAATTGGT+GGG | - | chr5.2:73048360-73048379 | MS.gene016758:CDS | 40.0% | |
GTGGCCAATGATCTTGAATT+TGG | + | chr5.2:73052764-73052783 | None:intergenic | 40.0% | |
TACATCTACGATGTTTACCC+AGG | + | chr5.2:73050657-73050676 | None:intergenic | 40.0% | |
TACCCATTGAACCTTCTTCA+TGG | - | chr5.2:73051116-73051135 | MS.gene016758:intron | 40.0% | |
TACTACAACAGAAGCCAACT+TGG | - | chr5.2:73049021-73049040 | MS.gene016758:intron | 40.0% | |
TCACCTATATGAGTGTCAAG+TGG | + | chr5.2:73050917-73050936 | None:intergenic | 40.0% | |
TCCCATGAAGAAGGTTCAAT+GGG | + | chr5.2:73051121-73051140 | None:intergenic | 40.0% | |
TCCCTAAATTTCTTCCCAAG+GGG | - | chr5.2:73051201-73051220 | MS.gene016758:intron | 40.0% | |
TCTTGAAATTGCGGTGATTG+CGG | - | chr5.2:73050039-73050058 | MS.gene016758:intron | 40.0% | |
TGACAAAGTCACTGTCCTTA+AGG | - | chr5.2:73050153-73050172 | MS.gene016758:intron | 40.0% | |
TGACAAGAAGAGAATTGGTG+GGG | - | chr5.2:73048361-73048380 | MS.gene016758:CDS | 40.0% | |
TGGTGAAAAATCAAATGGGG+AGG | - | chr5.2:73048268-73048287 | MS.gene016758:CDS | 40.0% | |
TGTCGTGACAAGAAGAGAAT+TGG | - | chr5.2:73048356-73048375 | MS.gene016758:CDS | 40.0% | |
TGTTGTTGATACACTGATGC+AGG | + | chr5.2:73052357-73052376 | None:intergenic | 40.0% | |
TTACATATTGCTGCAAGAGG+TGG | - | chr5.2:73048134-73048153 | MS.gene016758:CDS | 40.0% | |
TTCTCATTGTCAATAGAGCC+TGG | + | chr5.2:73047909-73047928 | None:intergenic | 40.0% | |
TTGGTTGGCAAATGTGTTTC+TGG | - | chr5.2:73054095-73054114 | MS.gene016758:CDS | 40.0% | |
TTTGCAGCAACTTACTCGTA+TGG | - | chr5.2:73049876-73049895 | MS.gene016758:intron | 40.0% | |
! | AAGTATACAGAGCTGGTTCA+AGG | - | chr5.2:73047949-73047968 | MS.gene016758:CDS | 40.0% |
! | AAGTCTCATTAGTCTAGGAC+GGG | + | chr5.2:73050711-73050730 | None:intergenic | 40.0% |
! | CAACAGCTGTTTGGTTGTTT+TGG | + | chr5.2:73049490-73049509 | None:intergenic | 40.0% |
! | CTACTACCTCATGTTTTCCA+TGG | + | chr5.2:73049304-73049323 | None:intergenic | 40.0% |
! | GTGGCACTGAAAAATGTTGA+AGG | - | chr5.2:73048305-73048324 | MS.gene016758:CDS | 40.0% |
! | TCTGGCTTAGCAACATTGTT+GGG | + | chr5.2:73048551-73048570 | None:intergenic | 40.0% |
!! | AGACACTTGTTGTATGCAAG+AGG | - | chr5.2:73050769-73050788 | MS.gene016758:intron | 40.0% |
!! | CAAGTTTGTGTCACTTTGTC+TGG | + | chr5.2:73053575-73053594 | None:intergenic | 40.0% |
!! | CACTTTGTCTGGCTTTATCA+TGG | + | chr5.2:73053564-73053583 | None:intergenic | 40.0% |
!! | CTAAGAGTACCTTGGTCATT+GGG | + | chr5.2:73052536-73052555 | None:intergenic | 40.0% |
!! | CTCACTATCTTTGGCTTTCA+TGG | - | chr5.2:73054041-73054060 | MS.gene016758:CDS | 40.0% |
!! | TCTAAGAGTACCTTGGTCAT+TGG | + | chr5.2:73052537-73052556 | None:intergenic | 40.0% |
!! | TTCTGGCTTAGCAACATTGT+TGG | + | chr5.2:73048552-73048571 | None:intergenic | 40.0% |
!! | TTGAAGATGATGGGACGAAA+AGG | + | chr5.2:73054167-73054186 | None:intergenic | 40.0% |
ACAGACATTCATCACGAGCA+AGG | - | chr5.2:73052692-73052711 | MS.gene016758:CDS | 45.0% | |
AGAACATGTTGTATCCTGGG+AGG | + | chr5.2:73050204-73050223 | None:intergenic | 45.0% | |
AGGAGATACTCCTTTGCATC+TGG | - | chr5.2:73049391-73049410 | MS.gene016758:intron | 45.0% | |
AGGCTACCCTTGAAGAATTG+TGG | + | chr5.2:73048670-73048689 | None:intergenic | 45.0% | |
CATGGGATCTCCAATCACAA+AGG | - | chr5.2:73051134-73051153 | MS.gene016758:intron | 45.0% | |
CCCATATTTGTCCCTCTGAT+TGG | + | chr5.2:73049150-73049169 | None:intergenic | 45.0% | |
CGCGTAACAGCAAGAATTGT+GGG | + | chr5.2:73050815-73050834 | None:intergenic | 45.0% | |
CGTAACAGCAAGAATTGTGG+GGG | + | chr5.2:73050813-73050832 | None:intergenic | 45.0% | |
CGTGACAAGAAGAGAATTGG+TGG | - | chr5.2:73048359-73048378 | MS.gene016758:CDS | 45.0% | |
CTGGCTTAGCAACATTGTTG+GGG | + | chr5.2:73048550-73048569 | None:intergenic | 45.0% | |
CTGTAGCAGCAATCATGAAG+CGG | - | chr5.2:73048585-73048604 | MS.gene016758:intron | 45.0% | |
CTTCATGATTGCTGCTACAG+CGG | + | chr5.2:73048585-73048604 | None:intergenic | 45.0% | |
CTTCATGTTGCAGCATACCA+TGG | - | chr5.2:73049284-73049303 | MS.gene016758:intron | 45.0% | |
GATTGGAGATCCCATGAAGA+AGG | + | chr5.2:73051130-73051149 | None:intergenic | 45.0% | |
GCAATCATGAAGCGGAATCA+AGG | - | chr5.2:73048593-73048612 | MS.gene016758:intron | 45.0% | |
GCGTAACAGCAAGAATTGTG+GGG | + | chr5.2:73050814-73050833 | None:intergenic | 45.0% | |
GCGTTACATATTGCTGCAAG+AGG | - | chr5.2:73048131-73048150 | MS.gene016758:CDS | 45.0% | |
GGATCTCCAATCACAAAGGT+TGG | - | chr5.2:73051138-73051157 | MS.gene016758:intron | 45.0% | |
GGCTACCCTTGAAGAATTGT+GGG | + | chr5.2:73048669-73048688 | None:intergenic | 45.0% | |
GGGAAGAACATGTTGTATCC+TGG | + | chr5.2:73050208-73050227 | None:intergenic | 45.0% | |
TAGGGTAGAGACACTCACAT+TGG | - | chr5.2:73053780-73053799 | MS.gene016758:CDS | 45.0% | |
TCAGAGGGTTCAGCATTACT+CGG | + | chr5.2:73053610-73053629 | None:intergenic | 45.0% | |
TGAAACCGTCTTACAGAGTG+AGG | - | chr5.2:73047839-73047858 | MS.gene016758:CDS | 45.0% | |
TGAAAGAGTGGATCTTCAGC+TGG | - | chr5.2:73049460-73049479 | MS.gene016758:intron | 45.0% | |
TGCAGTTGAAAATGGGGACA+AGG | - | chr5.2:73048496-73048515 | MS.gene016758:intron | 45.0% | |
TTACCATAAGCCCTTATGGG+TGG | + | chr5.2:73050969-73050988 | None:intergenic | 45.0% | |
TTCATGATTGCTGCTACAGC+GGG | + | chr5.2:73048584-73048603 | None:intergenic | 45.0% | |
! | ATACAGAGCTGGTTCAAGGA+GGG | - | chr5.2:73047953-73047972 | MS.gene016758:CDS | 45.0% |
! | CTAGAGCACTCATGAATACC+AGG | + | chr5.2:73050865-73050884 | None:intergenic | 45.0% |
! | GAAGTGTCAAGCATCTCTGT+GGG | + | chr5.2:73049248-73049267 | None:intergenic | 45.0% |
! | GCCAGAGAGGTATGTAGAAT+TGG | - | chr5.2:73049548-73049567 | MS.gene016758:intron | 45.0% |
! | TATACAGAGCTGGTTCAAGG+AGG | - | chr5.2:73047952-73047971 | MS.gene016758:CDS | 45.0% |
! | TGAAGTGTCAAGCATCTCTG+TGG | + | chr5.2:73049249-73049268 | None:intergenic | 45.0% |
! | TGCTCCAACACTTTTGTTCG+AGG | - | chr5.2:73048088-73048107 | MS.gene016758:CDS | 45.0% |
! | TGTCCCCATTTTCAACTGCA+AGG | + | chr5.2:73048496-73048515 | None:intergenic | 45.0% |
!! | CCACAATTCTTGCTGTTACG+CGG | - | chr5.2:73050813-73050832 | MS.gene016758:intron | 45.0% |
!! | CTATCTTTGGCTTTCATGGC+TGG | - | chr5.2:73054045-73054064 | MS.gene016758:CDS | 45.0% |
!! | AAGAAAATATATATATTTAT+TGG | + | chr5.2:73051646-73051665 | None:intergenic | 5.0% |
!!! | AAAAAAAAAAAATCTTTTTA+CGG | + | chr5.2:73050406-73050425 | None:intergenic | 5.0% |
AAGCGACAAACCCCCACATT+GGG | - | chr5.2:73051534-73051553 | MS.gene016758:intron | 50.0% | |
ACACCACCCATAAGGGCTTA+TGG | - | chr5.2:73050963-73050982 | MS.gene016758:intron | 50.0% | |
ACAGCGGGTGATAATCCTTC+TGG | + | chr5.2:73048569-73048588 | None:intergenic | 50.0% | |
ACGAGAGCGATTCCAAGAAG+TGG | + | chr5.2:73054021-73054040 | None:intergenic | 50.0% | |
AGCATCATATGGTGGCCATG+TGG | - | chr5.2:73049187-73049206 | MS.gene016758:intron | 50.0% | |
CAGACTCTGCGAGATATGCA+AGG | + | chr5.2:73054233-73054252 | None:intergenic | 50.0% | |
CCGCGTAACAGCAAGAATTG+TGG | + | chr5.2:73050816-73050835 | None:intergenic | 50.0% | |
CGCTCTCGTCTCACTATCTT+TGG | - | chr5.2:73054032-73054051 | MS.gene016758:CDS | 50.0% | |
GAGGATATGCGCTTATGAGG+CGG | + | chr5.2:73050185-73050204 | None:intergenic | 50.0% | |
GATTGTGCAGCCAGATGCAA+AGG | + | chr5.2:73049404-73049423 | None:intergenic | 50.0% | |
GCCCCACTTGACACTCATAT+AGG | - | chr5.2:73050911-73050930 | MS.gene016758:intron | 50.0% | |
GGGAACCCAACCTTTGTGAT+TGG | + | chr5.2:73051147-73051166 | None:intergenic | 50.0% | |
TAAGCGACAAACCCCCACAT+TGG | - | chr5.2:73051533-73051552 | MS.gene016758:intron | 50.0% | |
TCAAGCATCTCTGTGGGATC+TGG | + | chr5.2:73049242-73049261 | None:intergenic | 50.0% | |
TCATAAGCGCATATCCTCCC+AGG | - | chr5.2:73050187-73050206 | MS.gene016758:intron | 50.0% | |
TCGGGGATTCATCGTCAAAG+TGG | - | chr5.2:73048417-73048436 | MS.gene016758:intron | 50.0% | |
TGATTGCGGTGACTTGACGT+CGG | - | chr5.2:73050053-73050072 | MS.gene016758:intron | 50.0% | |
TGGACCAACCTTCTCAACCT+TGG | + | chr5.2:73053544-73053563 | None:intergenic | 50.0% | |
TGGGAGGATATGCGCTTATG+AGG | + | chr5.2:73050188-73050207 | None:intergenic | 50.0% | |
TTACGCGGTTGTGCGCTAAT+AGG | - | chr5.2:73050828-73050847 | MS.gene016758:intron | 50.0% | |
! | GCATTACTCGGCTCTGATTG+TGG | + | chr5.2:73053598-73053617 | None:intergenic | 50.0% |
!! | CGTATGGCTTTGACTTCTGC+TGG | - | chr5.2:73049892-73049911 | MS.gene016758:intron | 50.0% |
!!! | GCAGCATGTTTTGCTGTTCC+AGG | - | chr5.2:73053832-73053851 | MS.gene016758:CDS | 50.0% |
ATGAATACCAGGCACGCGCA+CGG | + | chr5.2:73050854-73050873 | None:intergenic | 55.0% | |
CGGAACGGTGTAGCAAGCTA+TGG | - | chr5.2:73050683-73050702 | MS.gene016758:intron | 55.0% | |
CGGTGACTTGACGTCGGTAA+CGG | - | chr5.2:73050059-73050078 | MS.gene016758:intron | 55.0% | |
GGCGATACACCCAATGACCA+AGG | - | chr5.2:73052524-73052543 | MS.gene016758:CDS | 55.0% | |
TCGTAATTCGTCCGCCAGAG+AGG | - | chr5.2:73049535-73049554 | MS.gene016758:intron | 55.0% | |
!!! | GCTTTTCCATCGGCTTCACC+TGG | + | chr5.2:73053853-73053872 | None:intergenic | 55.0% |
CTGAGGCTCGTCGTCGTAGT+GGG | + | chr5.2:73052738-73052757 | None:intergenic | 60.0% | |
GCTGTTCCAGGTGAAGCCGA+TGG | - | chr5.2:73053844-73053863 | MS.gene016758:CDS | 60.0% | |
! | TCTGAGGCTCGTCGTCGTAG+TGG | + | chr5.2:73052739-73052758 | None:intergenic | 60.0% |
!! | AGTGCTCTAGAGACCCGCCA+CGG | - | chr5.2:73050875-73050894 | MS.gene016758:intron | 60.0% |
CCGCCACGGTCTCATGCAAG+CGG | - | chr5.2:73050889-73050908 | MS.gene016758:intron | 65.0% | |
CCGCTTGCATGAGACCGTGG+CGG | + | chr5.2:73050892-73050911 | None:intergenic | 65.0% | |
CGCTTGCATGAGACCGTGGC+GGG | + | chr5.2:73050891-73050910 | None:intergenic | 65.0% | |
TAATAGGCCGTGCGCGTGCC+TGG | - | chr5.2:73050844-73050863 | MS.gene016758:intron | 65.0% | |
GGGCCGCTTGCATGAGACCG+TGG | + | chr5.2:73050895-73050914 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 73047738 | 73054260 | 73047738 | ID=MS.gene016758 |
chr5.2 | mRNA | 73047738 | 73054260 | 73047738 | ID=MS.gene016758.t1;Parent=MS.gene016758 |
chr5.2 | exon | 73053384 | 73054260 | 73053384 | ID=MS.gene016758.t1.exon1;Parent=MS.gene016758.t1 |
chr5.2 | CDS | 73053384 | 73054260 | 73053384 | ID=cds.MS.gene016758.t1;Parent=MS.gene016758.t1 |
chr5.2 | exon | 73052462 | 73052992 | 73052462 | ID=MS.gene016758.t1.exon2;Parent=MS.gene016758.t1 |
chr5.2 | CDS | 73052462 | 73052992 | 73052462 | ID=cds.MS.gene016758.t1;Parent=MS.gene016758.t1 |
chr5.2 | exon | 73047738 | 73048393 | 73047738 | ID=MS.gene016758.t1.exon3;Parent=MS.gene016758.t1 |
chr5.2 | CDS | 73047738 | 73048393 | 73047738 | ID=cds.MS.gene016758.t1;Parent=MS.gene016758.t1 |
Gene Sequence |
Protein sequence |