Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057884.t1 | XP_024640313.1 | 60 | 705 | 250 | 6 | 43 | 724 | 6 | 701 | 5.20E-180 | 641.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057884.t1 | G7KHB3 | 60.0 | 705 | 250 | 6 | 43 | 724 | 6 | 701 | 3.8e-180 | 641.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057884.t1 | MTR_5g085480 | 67.465 | 710 | 189 | 8 | 43 | 724 | 6 | 701 | 0.0 | 884 |
MS.gene057884.t1 | MTR_5g085830 | 61.505 | 691 | 230 | 12 | 38 | 715 | 40 | 707 | 0.0 | 785 |
MS.gene057884.t1 | MTR_5g085810 | 60.333 | 721 | 218 | 14 | 38 | 713 | 36 | 733 | 0.0 | 776 |
MS.gene057884.t1 | MTR_5g085480 | 65.461 | 553 | 152 | 7 | 199 | 724 | 1 | 541 | 0.0 | 659 |
MS.gene057884.t1 | MTR_2g033050 | 78.680 | 394 | 76 | 4 | 86 | 477 | 1 | 388 | 0.0 | 625 |
MS.gene057884.t1 | MTR_5g085490 | 76.552 | 290 | 52 | 4 | 2 | 288 | 9 | 285 | 2.16e-150 | 439 |
MS.gene057884.t1 | MTR_5g085500 | 54.697 | 479 | 126 | 9 | 318 | 720 | 2 | 465 | 1.39e-148 | 441 |
MS.gene057884.t1 | MTR_5g085440 | 52.273 | 396 | 115 | 11 | 335 | 724 | 38 | 365 | 1.27e-105 | 327 |
MS.gene057884.t1 | MTR_5g085440 | 67.262 | 168 | 44 | 1 | 2 | 169 | 3 | 159 | 5.67e-65 | 220 |
MS.gene057884.t1 | MTR_2g033045 | 75.455 | 220 | 34 | 2 | 500 | 719 | 25 | 224 | 1.74e-100 | 311 |
MS.gene057884.t1 | MTR_5g085520 | 75.743 | 202 | 46 | 2 | 93 | 291 | 1 | 202 | 3.55e-95 | 294 |
MS.gene057884.t1 | MTR_5g085530 | 77.941 | 68 | 14 | 1 | 301 | 367 | 6 | 73 | 1.45e-29 | 112 |
MS.gene057884.t1 | MTR_2g096190 | 26.360 | 478 | 292 | 14 | 226 | 679 | 41 | 482 | 1.54e-25 | 112 |
MS.gene057884.t1 | MTR_7g100390 | 26.974 | 456 | 284 | 11 | 245 | 680 | 46 | 472 | 4.70e-24 | 107 |
MS.gene057884.t1 | MTR_4g062100 | 26.872 | 454 | 280 | 18 | 245 | 675 | 67 | 491 | 1.12e-23 | 106 |
MS.gene057884.t1 | MTR_7g117620 | 27.333 | 450 | 275 | 18 | 252 | 685 | 85 | 498 | 9.86e-23 | 103 |
MS.gene057884.t1 | MTR_1g069110 | 27.506 | 389 | 225 | 15 | 303 | 656 | 30 | 396 | 1.01e-21 | 99.4 |
MS.gene057884.t1 | MTR_1g115575 | 25.591 | 465 | 305 | 14 | 245 | 698 | 128 | 562 | 3.31e-21 | 99.0 |
MS.gene057884.t1 | MTR_1g032100 | 26.793 | 474 | 286 | 17 | 238 | 687 | 47 | 483 | 5.16e-21 | 97.8 |
MS.gene057884.t1 | MTR_7g100430 | 23.946 | 522 | 317 | 14 | 235 | 698 | 55 | 554 | 5.73e-19 | 91.7 |
MS.gene057884.t1 | MTR_2g101310 | 23.009 | 452 | 269 | 15 | 301 | 682 | 152 | 594 | 3.87e-17 | 85.9 |
MS.gene057884.t1 | MTR_8g105260 | 25.594 | 379 | 245 | 11 | 301 | 665 | 112 | 467 | 4.82e-16 | 82.4 |
MS.gene057884.t1 | MTR_5g085560 | 42.857 | 119 | 45 | 5 | 482 | 581 | 2 | 116 | 7.61e-14 | 69.3 |
MS.gene057884.t1 | MTR_2g101320 | 23.022 | 417 | 257 | 11 | 301 | 658 | 152 | 563 | 7.91e-14 | 75.5 |
MS.gene057884.t1 | MTR_8g073260 | 27.719 | 285 | 162 | 10 | 306 | 582 | 62 | 310 | 3.28e-11 | 66.6 |
MS.gene057884.t1 | MTR_2g101310 | 26.027 | 219 | 145 | 5 | 301 | 511 | 152 | 361 | 7.93e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057884.t1 | AT4G03460 | 30.255 | 628 | 333 | 11 | 95 | 708 | 81 | 617 | 1.65e-65 | 229 |
MS.gene057884.t1 | AT4G03500 | 29.027 | 627 | 334 | 12 | 95 | 707 | 80 | 609 | 1.27e-63 | 224 |
MS.gene057884.t1 | AT4G03500 | 29.027 | 627 | 334 | 12 | 95 | 707 | 80 | 609 | 1.27e-63 | 224 |
MS.gene057884.t1 | AT4G03460 | 29.464 | 672 | 360 | 15 | 58 | 708 | 7 | 585 | 1.34e-63 | 223 |
MS.gene057884.t1 | AT4G03500 | 29.027 | 627 | 334 | 12 | 95 | 707 | 103 | 632 | 1.45e-63 | 224 |
MS.gene057884.t1 | AT1G03670 | 27.994 | 643 | 322 | 20 | 95 | 708 | 73 | 603 | 5.56e-56 | 202 |
MS.gene057884.t1 | AT4G03490 | 27.339 | 684 | 351 | 24 | 91 | 724 | 33 | 620 | 1.56e-53 | 196 |
MS.gene057884.t1 | AT4G03490 | 27.339 | 684 | 351 | 24 | 91 | 724 | 23 | 610 | 1.63e-53 | 195 |
MS.gene057884.t1 | AT4G03490 | 27.124 | 671 | 342 | 22 | 91 | 721 | 33 | 596 | 5.23e-52 | 192 |
MS.gene057884.t1 | AT4G03490 | 25.753 | 664 | 322 | 21 | 91 | 721 | 13 | 538 | 2.31e-44 | 170 |
MS.gene057884.t1 | AT4G03490 | 25.753 | 664 | 322 | 21 | 91 | 721 | 23 | 548 | 3.16e-44 | 169 |
MS.gene057884.t1 | AT4G03440 | 26.923 | 676 | 364 | 22 | 90 | 717 | 107 | 700 | 1.69e-41 | 162 |
MS.gene057884.t1 | AT4G03440 | 26.923 | 676 | 364 | 22 | 90 | 717 | 107 | 700 | 1.69e-41 | 162 |
MS.gene057884.t1 | AT4G03440 | 26.923 | 676 | 364 | 22 | 90 | 717 | 114 | 707 | 2.30e-41 | 162 |
MS.gene057884.t1 | AT4G03480 | 28.028 | 578 | 311 | 17 | 86 | 618 | 142 | 659 | 3.67e-39 | 154 |
MS.gene057884.t1 | AT4G03480 | 27.863 | 585 | 300 | 19 | 86 | 618 | 142 | 656 | 1.91e-38 | 152 |
MS.gene057884.t1 | AT4G03450 | 25.949 | 632 | 356 | 17 | 98 | 715 | 75 | 608 | 9.04e-36 | 144 |
MS.gene057884.t1 | AT4G03470 | 26.761 | 639 | 321 | 22 | 82 | 689 | 107 | 629 | 1.82e-35 | 143 |
MS.gene057884.t1 | AT4G03450 | 25.990 | 581 | 332 | 15 | 98 | 664 | 75 | 571 | 3.85e-35 | 142 |
MS.gene057884.t1 | AT4G14390 | 25.122 | 613 | 355 | 16 | 86 | 682 | 124 | 648 | 1.46e-33 | 137 |
MS.gene057884.t1 | AT4G14390 | 25.327 | 612 | 354 | 16 | 86 | 682 | 105 | 628 | 3.27e-33 | 136 |
MS.gene057884.t1 | AT4G14390 | 25.327 | 612 | 354 | 16 | 86 | 682 | 124 | 647 | 5.16e-33 | 136 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G05040 | 26.465 | 529 | 264 | 13 | 89 | 594 | 110 | 536 | 1.56e-29 | 124 |
MS.gene057884.t1 | AT4G14400 | 24.719 | 623 | 357 | 21 | 86 | 688 | 93 | 623 | 2.40e-26 | 115 |
MS.gene057884.t1 | AT4G14400 | 24.719 | 623 | 357 | 21 | 86 | 688 | 27 | 557 | 4.24e-26 | 114 |
MS.gene057884.t1 | AT4G14400 | 24.719 | 623 | 357 | 21 | 86 | 688 | 27 | 557 | 4.24e-26 | 114 |
MS.gene057884.t1 | AT5G60070 | 26.432 | 454 | 292 | 13 | 245 | 681 | 70 | 498 | 1.27e-25 | 112 |
MS.gene057884.t1 | AT5G02620 | 27.231 | 437 | 271 | 15 | 245 | 660 | 53 | 463 | 3.18e-25 | 110 |
MS.gene057884.t1 | AT5G02620 | 27.231 | 437 | 271 | 15 | 245 | 660 | 53 | 463 | 3.18e-25 | 110 |
MS.gene057884.t1 | AT5G02620 | 27.231 | 437 | 271 | 15 | 245 | 660 | 53 | 463 | 3.18e-25 | 110 |
MS.gene057884.t1 | AT3G12360 | 25.358 | 489 | 317 | 17 | 244 | 723 | 113 | 562 | 8.44e-24 | 107 |
MS.gene057884.t1 | AT3G12360 | 25.358 | 489 | 317 | 17 | 244 | 723 | 125 | 574 | 1.20e-23 | 106 |
MS.gene057884.t1 | AT5G02620 | 26.247 | 461 | 268 | 16 | 245 | 660 | 53 | 486 | 7.21e-23 | 103 |
MS.gene057884.t1 | AT5G02620 | 26.247 | 461 | 268 | 16 | 245 | 660 | 53 | 486 | 7.21e-23 | 103 |
MS.gene057884.t1 | AT4G14390 | 26.379 | 417 | 253 | 13 | 63 | 470 | 77 | 448 | 2.00e-21 | 99.0 |
MS.gene057884.t1 | AT3G09550 | 24.947 | 473 | 300 | 12 | 244 | 698 | 146 | 581 | 1.77e-20 | 96.7 |
MS.gene057884.t1 | AT3G09550 | 24.947 | 473 | 300 | 12 | 244 | 698 | 139 | 574 | 2.31e-20 | 96.3 |
MS.gene057884.t1 | AT3G09550 | 24.947 | 473 | 300 | 12 | 244 | 698 | 139 | 574 | 2.31e-20 | 96.3 |
MS.gene057884.t1 | AT2G31820 | 23.284 | 408 | 253 | 10 | 324 | 687 | 227 | 618 | 1.38e-17 | 87.8 |
MS.gene057884.t1 | AT1G05640 | 25.877 | 456 | 289 | 17 | 252 | 687 | 157 | 583 | 1.55e-17 | 87.4 |
MS.gene057884.t1 | AT1G07710 | 27.149 | 442 | 272 | 13 | 245 | 665 | 63 | 475 | 2.11e-17 | 86.7 |
MS.gene057884.t1 | AT1G07710 | 27.149 | 442 | 272 | 13 | 245 | 665 | 63 | 475 | 2.11e-17 | 86.7 |
MS.gene057884.t1 | AT2G01680 | 23.656 | 465 | 298 | 14 | 241 | 685 | 52 | 479 | 2.71e-17 | 86.3 |
MS.gene057884.t1 | AT5G54710 | 22.258 | 620 | 420 | 17 | 95 | 688 | 19 | 602 | 2.24e-16 | 83.6 |
MS.gene057884.t1 | AT5G54710 | 24.378 | 402 | 267 | 10 | 302 | 688 | 178 | 557 | 3.98e-16 | 82.8 |
MS.gene057884.t1 | AT1G34050 | 20.857 | 537 | 356 | 14 | 191 | 710 | 67 | 551 | 2.22e-15 | 80.5 |
MS.gene057884.t1 | AT2G24600 | 22.951 | 549 | 327 | 18 | 128 | 659 | 37 | 506 | 7.62e-12 | 68.9 |
MS.gene057884.t1 | AT2G24600 | 22.951 | 549 | 327 | 18 | 128 | 659 | 37 | 506 | 7.62e-12 | 68.9 |
MS.gene057884.t1 | AT1G10340 | 22.299 | 435 | 270 | 16 | 252 | 659 | 109 | 502 | 1.74e-11 | 67.8 |
MS.gene057884.t1 | AT5G51160 | 25.182 | 274 | 173 | 8 | 318 | 582 | 44 | 294 | 2.44e-11 | 67.0 |
Find 125 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTATCTTTGGCTTTCA+TGG | 0.158618 | 5.3:+69266933 | MS.gene057884:CDS |
TTGCAATTATTAGACATTAT+TGG | 0.187691 | 5.3:+69265415 | MS.gene057884:intron |
CGCTCTCATTTCATTATCTT+TGG | 0.211926 | 5.3:+69266924 | MS.gene057884:CDS |
AGAAAGAGTGAAACTTAATT+TGG | 0.212292 | 5.3:+69265916 | MS.gene057884:CDS |
TTCGGCTTATCATCATTCTT+AGG | 0.212895 | 5.3:-69265127 | None:intergenic |
GTGCTACCATCATACTCTTT+TGG | 0.232922 | 5.3:+69266836 | MS.gene057884:CDS |
TGCAATTATTAGACATTATT+GGG | 0.236103 | 5.3:+69265416 | MS.gene057884:intron |
GTTCAACATTGTCTTCATTT+TGG | 0.244831 | 5.3:-69266552 | None:intergenic |
GAAGCATATCACTTGGTATA+TGG | 0.252631 | 5.3:+69264515 | MS.gene057884:CDS |
GTTAGAATACACTAACAATT+TGG | 0.259464 | 5.3:+69264802 | MS.gene057884:CDS |
CCATATGATGCTAGATGAAT+TGG | 0.269046 | 5.3:-69265632 | None:intergenic |
ACAATTCAAAGGGACAAATT+AGG | 0.272197 | 5.3:+69265602 | MS.gene057884:CDS |
CAAGAGCTGTTTCGTTGTTT+TGG | 0.276243 | 5.3:-69265943 | None:intergenic |
TGAAGTGCTAGTACTCTTCT+AGG | 0.277176 | 5.3:-69266475 | None:intergenic |
GTTTCACTCTTTCTTTGCTT+TGG | 0.290699 | 5.3:-69265907 | None:intergenic |
AAAATTGTTATGCGGCTTCT+TGG | 0.295438 | 5.3:+69266898 | MS.gene057884:CDS |
TTTCTGTTTCTCCTCTGTTT+TGG | 0.308847 | 5.3:-69266617 | None:intergenic |
TTAAATGTGAACAAAAGTTT+TGG | 0.315107 | 5.3:-69264665 | None:intergenic |
CTTCACATTGCATCAAACTA+TGG | 0.318717 | 5.3:+69265740 | MS.gene057884:CDS |
TTATCTTTGGCTTTCATGGC+TGG | 0.329139 | 5.3:+69266937 | MS.gene057884:CDS |
GATAAGCCTTCAGAAGAAAA+AGG | 0.333198 | 5.3:-69264383 | None:intergenic |
AAGGATCTCAGTTACCTCTA+AGG | 0.337675 | 5.3:-69264450 | None:intergenic |
CTTCATTACGCATCGACTAT+AGG | 0.350424 | 5.3:+69265533 | MS.gene057884:CDS |
AGGAGATACTCCTTTGCATT+TGG | 0.359239 | 5.3:+69265841 | MS.gene057884:CDS |
ACTAAGTGGTACACAGTTCT+AGG | 0.364146 | 5.3:-69265881 | None:intergenic |
CTATGATGAAAAGTCAAATA+TGG | 0.374976 | 5.3:+69264838 | MS.gene057884:CDS |
GAGGAATGTAGCAAAGTCTT+TGG | 0.375367 | 5.3:-69264542 | None:intergenic |
GAGTATGATGGTAGCACTAA+TGG | 0.379466 | 5.3:-69266830 | None:intergenic |
CTTTACCTTGCGGTCGAGAA+TGG | 0.383586 | 5.3:+69265067 | MS.gene057884:CDS |
TCGGCTTATCATCATTCTTA+GGG | 0.387298 | 5.3:-69265126 | None:intergenic |
TGAATTTGAATCACTTGGTT+TGG | 0.387429 | 5.3:-69266506 | None:intergenic |
ATATGAAATTGAACCCTTAG+AGG | 0.390512 | 5.3:+69264436 | MS.gene057884:CDS |
TTCGATGTTTGTCCCTTGAA+TGG | 0.398626 | 5.3:-69265502 | None:intergenic |
TACCTTGATTGCTGCTACAA+CGG | 0.399472 | 5.3:-69265161 | None:intergenic |
TTTACCTTGCGGTCGAGAAT+GGG | 0.401135 | 5.3:+69265068 | MS.gene057884:CDS |
ACCTTGATTGCTGCTACAAC+GGG | 0.401924 | 5.3:-69265160 | None:intergenic |
CCAATTCATCTAGCATCATA+TGG | 0.404047 | 5.3:+69265632 | MS.gene057884:CDS |
GGCTTCATCCTGCTCTGGTT+GGG | 0.414988 | 5.3:-69264345 | None:intergenic |
AACACTTGGAATAACTGAAT+TGG | 0.418036 | 5.3:+69266861 | MS.gene057884:CDS |
TCAAGCATTTCTGTGGGATC+TGG | 0.420298 | 5.3:-69265695 | None:intergenic |
AAGGAATGTGAGTAGCTATA+AGG | 0.420352 | 5.3:+69264406 | MS.gene057884:CDS |
AATGTTTGCAGCTTCTTACA+TGG | 0.425057 | 5.3:+69266419 | MS.gene057884:intron |
TTTGTTTCACTTTGTTGAGA+TGG | 0.426628 | 5.3:-69266574 | None:intergenic |
AAGCATATCACTTGGTATAT+GGG | 0.427805 | 5.3:+69264516 | MS.gene057884:CDS |
GGACGCAGTCAAACTAATCT+TGG | 0.439229 | 5.3:+69265096 | MS.gene057884:CDS |
AAGGGTTCAATTTCATATCC+AGG | 0.443417 | 5.3:-69264431 | None:intergenic |
TTATCAAATTCGCAACAGTT+TGG | 0.447270 | 5.3:-69264473 | None:intergenic |
GTAATAATTCAACACCTTCA+AGG | 0.447605 | 5.3:-69265559 | None:intergenic |
GTGAAGAAGGAGAATGTTCA+AGG | 0.451150 | 5.3:+69264878 | MS.gene057884:CDS |
TACTAGAAAAGAAGCCAACT+TGG | 0.462511 | 5.3:+69265477 | MS.gene057884:CDS |
CTTTGCTTTGGTTAACTAAG+TGG | 0.465768 | 5.3:-69265895 | None:intergenic |
GCAAATGTTGCACAATTCAA+AGG | 0.478259 | 5.3:+69265591 | MS.gene057884:CDS |
ACCTCTTGCAGCAACATGTA+AGG | 0.481999 | 5.3:-69264705 | None:intergenic |
AGGCTTCATCCTGCTCTGGT+TGG | 0.483443 | 5.3:-69264346 | None:intergenic |
CTTGAAACATTGCTTGACAT+AGG | 0.487734 | 5.3:-69266771 | None:intergenic |
GATAAGGCTTCATCCTGCTC+TGG | 0.488659 | 5.3:-69264350 | None:intergenic |
GGTATCCGCCCAACCAGAGC+AGG | 0.491386 | 5.3:+69264337 | MS.gene057884:CDS |
CGTGATGCCAAGAAAAGATA+AGG | 0.491664 | 5.3:-69267111 | None:intergenic |
TTTCTTCTGAAGGCTTATCA+AGG | 0.491934 | 5.3:+69264387 | MS.gene057884:CDS |
CAAATTCGCAACAGTTTGGA+AGG | 0.493552 | 5.3:-69264469 | None:intergenic |
AGCAGGATGAAGCCTTATCT+AGG | 0.499898 | 5.3:+69264354 | MS.gene057884:CDS |
GCCCGTTGTAGCAGCAATCA+AGG | 0.503007 | 5.3:+69265159 | MS.gene057884:CDS |
TCCCTTGAATGGATCCAAGT+TGG | 0.503972 | 5.3:-69265491 | None:intergenic |
CCAACTGAGTTCACTAATAA+CGG | 0.506737 | 5.3:-69266968 | None:intergenic |
AGCCAACTTGGATCCATTCA+AGG | 0.510712 | 5.3:+69265489 | MS.gene057884:CDS |
ATACTACAAAGTCAAATTCG+TGG | 0.514369 | 5.3:+69265785 | MS.gene057884:CDS |
TTATGTGACAAGAGCATTAG+TGG | 0.520589 | 5.3:+69264926 | MS.gene057884:CDS |
TATTAGTGAACTCAGTTGGT+TGG | 0.523598 | 5.3:+69266972 | MS.gene057884:CDS |
GAAACTCATTGTCAAAATGT+TGG | 0.529265 | 5.3:+69264999 | MS.gene057884:CDS |
CATATGATGCTAGATGAATT+GGG | 0.531667 | 5.3:-69265631 | None:intergenic |
TTTGGTGAATTTGAATCACT+TGG | 0.531776 | 5.3:-69266511 | None:intergenic |
AAAAGGCAGATTCCTAGATA+AGG | 0.532082 | 5.3:-69264366 | None:intergenic |
TCGACTATAGGTTACCTTGA+AGG | 0.532334 | 5.3:+69265545 | MS.gene057884:CDS |
CAAATGTTGCACAATTCAAA+GGG | 0.536101 | 5.3:+69265592 | MS.gene057884:CDS |
ACTGAAAGTAAACTTGATCA+AGG | 0.538412 | 5.3:+69267135 | MS.gene057884:CDS |
CCGTTATTAGTGAACTCAGT+TGG | 0.545315 | 5.3:+69266968 | MS.gene057884:CDS |
AGCATATCACTTGGTATATG+GGG | 0.548683 | 5.3:+69264517 | MS.gene057884:CDS |
CATGTTATGCTAATATTGAA+CGG | 0.550479 | 5.3:+69264759 | MS.gene057884:CDS |
AGGATCTCAGTTACCTCTAA+GGG | 0.553398 | 5.3:-69264449 | None:intergenic |
GCTTAGTGAAGCATATCACT+TGG | 0.554255 | 5.3:+69264508 | MS.gene057884:CDS |
GCTGTTCCAGGTGAAGCAGA+TGG | 0.557218 | 5.3:+69266736 | MS.gene057884:CDS |
GTGAGTAGCTATAAGGAACC+TGG | 0.561645 | 5.3:+69264413 | MS.gene057884:CDS |
GAGATTATAATATGCCCCAT+TGG | 0.562469 | 5.3:+69264303 | None:intergenic |
CTACATATTGCAGCTTGGAA+TGG | 0.566846 | 5.3:+69264605 | MS.gene057884:CDS |
AAAAGTGTCAAGCATTTCTG+TGG | 0.568047 | 5.3:-69265702 | None:intergenic |
TGGACTGCACTTAAAGCTGC+TGG | 0.572507 | 5.3:+69266439 | MS.gene057884:CDS |
TTCATCCTGCTCTGGTTGGG+CGG | 0.573410 | 5.3:-69264342 | None:intergenic |
TATGTGACAAGAGCATTAGT+GGG | 0.582601 | 5.3:+69264927 | MS.gene057884:CDS |
TGTTGCCCAAAAGAGTATGA+TGG | 0.588494 | 5.3:-69266842 | None:intergenic |
TTACTCTCAAAATTGTTATG+CGG | 0.589694 | 5.3:+69266890 | MS.gene057884:CDS |
ATTATAATATGCCCCATTGG+AGG | 0.594558 | 5.3:+69264306 | None:intergenic |
TTGATGATGATGGAAGGAAA+AGG | 0.595577 | 5.3:-69267056 | None:intergenic |
TGTCCCCATTCTCGACCGCA+AGG | 0.595849 | 5.3:-69265072 | None:intergenic |
CAGTGCTACATATTGCAGCT+TGG | 0.607320 | 5.3:+69264600 | MS.gene057884:CDS |
GCCTTACATGTTGCTGCAAG+AGG | 0.610873 | 5.3:+69264704 | MS.gene057884:CDS |
GGCTTGCTAGTTGATGATGA+TGG | 0.611945 | 5.3:-69267066 | None:intergenic |
TTACCTTGCGGTCGAGAATG+GGG | 0.615766 | 5.3:+69265069 | MS.gene057884:CDS |
ACAACGGGCGATAATCCCTT+CGG | 0.620725 | 5.3:-69265145 | None:intergenic |
ATAGTCGATGCGTAATGAAG+AGG | 0.623634 | 5.3:-69265530 | None:intergenic |
TAAGAATGATGATAAGCCGA+AGG | 0.624360 | 5.3:+69265129 | MS.gene057884:CDS |
AGGCAACATTATGTTACATG+AGG | 0.627564 | 5.3:+69264898 | MS.gene057884:CDS |
GCCAACTTGGATCCATTCAA+GGG | 0.628602 | 5.3:+69265490 | MS.gene057884:CDS |
GATCTTGCAGCCAAATGCAA+AGG | 0.631460 | 5.3:-69265851 | None:intergenic |
TGCGGTCGAGAATGGGGACA+AGG | 0.634129 | 5.3:+69265075 | MS.gene057884:CDS |
GAAATCTGTACTTTACCTTG+CGG | 0.636916 | 5.3:+69265057 | MS.gene057884:CDS |
TTACATGTTGCTGCAAGAGG+TGG | 0.637643 | 5.3:+69264707 | MS.gene057884:CDS |
TAATGAGAAATGTACCGCAA+TGG | 0.638151 | 5.3:-69267087 | None:intergenic |
AAGAATGATGATAAGCCGAA+GGG | 0.643420 | 5.3:+69265130 | MS.gene057884:CDS |
AAAGTGTCAAGCATTTCTGT+GGG | 0.645470 | 5.3:-69265701 | None:intergenic |
CATTGTTAGTGCACTCTACG+AGG | 0.645969 | 5.3:+69265967 | MS.gene057884:CDS |
TGATGAAAAGTCAAATATGG+AGG | 0.647702 | 5.3:+69264841 | MS.gene057884:CDS |
AGCATCATATGGTGGCCATG+TGG | 0.648207 | 5.3:+69265643 | MS.gene057884:CDS |
TAAGTGTTGAAACAATTGTG+AGG | 0.650525 | 5.3:-69266684 | None:intergenic |
TAACTTTATTCAGTCGACCA+CGG | 0.651056 | 5.3:-69267165 | None:intergenic |
ATCAAACTATGGAAAACATG+AGG | 0.653608 | 5.3:+69265751 | MS.gene057884:CDS |
TTGATCAAGGTGTTAATCCG+TGG | 0.654695 | 5.3:+69267148 | MS.gene057884:CDS |
AAACTATGGAAAACATGAGG+TGG | 0.654727 | 5.3:+69265754 | MS.gene057884:CDS |
TGCTAGTTGATGATGATGGA+AGG | 0.661467 | 5.3:-69267062 | None:intergenic |
ATTCAAGGGACAAACATCGA+AGG | 0.667952 | 5.3:+69265504 | MS.gene057884:CDS |
CATCAACTAGCAAGCCATTG+CGG | 0.674472 | 5.3:+69267073 | MS.gene057884:CDS |
TGAAATGTCAACCAAAACAG+AGG | 0.675245 | 5.3:+69266606 | MS.gene057884:CDS |
GCATATCACTTGGTATATGG+GGG | 0.676472 | 5.3:+69264518 | MS.gene057884:CDS |
ACTTCTTCACTACTTCCACA+TGG | 0.680029 | 5.3:-69265658 | None:intergenic |
ATTCATCTAGCATCATATGG+TGG | 0.697537 | 5.3:+69265635 | MS.gene057884:CDS |
ATGTGACAAGAGCATTAGTG+GGG | 0.704069 | 5.3:+69264928 | MS.gene057884:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGATTTATTTGATATTTA+TGG | - | chr5.3:69266241-69266260 | None:intergenic | 10.0% |
!! | ATAAATCAAAAAGATAATAA+AGG | + | chr5.3:69265821-69265840 | MS.gene057884:CDS | 10.0% |
!! | AATTTAATTAATGATGTATG+TGG | + | chr5.3:69266108-69266127 | MS.gene057884:intron | 15.0% |
!! | GGTGTATATAATATATATTA+TGG | - | chr5.3:69266135-69266154 | None:intergenic | 15.0% |
!!! | AATTTGTTTATAATTGACAA+CGG | + | chr5.3:69266182-69266201 | MS.gene057884:intron | 15.0% |
!! | AACATACTTATAAATTTGTG+AGG | - | chr5.3:69266032-69266051 | None:intergenic | 20.0% |
!! | ACATACTTATAAATTTGTGA+GGG | - | chr5.3:69266031-69266050 | None:intergenic | 20.0% |
!! | AGGTATGTAATTAAATAACT+AGG | + | chr5.3:69265179-69265198 | MS.gene057884:intron | 20.0% |
!! | ATTTAGAAATTCTTGTAACT+TGG | + | chr5.3:69266291-69266310 | MS.gene057884:intron | 20.0% |
!! | TATGTAATTAAATAACTAGG+TGG | + | chr5.3:69265182-69265201 | MS.gene057884:intron | 20.0% |
!! | TGCAATTATTAGACATTATT+GGG | + | chr5.3:69265416-69265435 | MS.gene057884:intron | 20.0% |
!! | TTGCAATTATTAGACATTAT+TGG | + | chr5.3:69265415-69265434 | MS.gene057884:intron | 20.0% |
!!! | AAAAAGGTAAGTAAACTTTT+AGG | + | chr5.3:69265267-69265286 | MS.gene057884:intron | 20.0% |
!!! | AAGTAAACTTTTAGGTAATA+TGG | + | chr5.3:69265275-69265294 | MS.gene057884:intron | 20.0% |
!!! | CTTAAATTGAGTATTTTATG+AGG | + | chr5.3:69265384-69265403 | MS.gene057884:intron | 20.0% |
!!! | TCTTTATCTGATTCTATTTT+TGG | - | chr5.3:69266532-69266551 | None:intergenic | 20.0% |
!!! | TTAAATGTGAACAAAAGTTT+TGG | - | chr5.3:69264668-69264687 | None:intergenic | 20.0% |
!!! | TTTTAGATTCATTCGATTTA+TGG | - | chr5.3:69266156-69266175 | None:intergenic | 20.0% |
! | AATAACAATCCTTTCTAACT+TGG | - | chr5.3:69266348-69266367 | None:intergenic | 25.0% |
! | AGAAAGAGTGAAACTTAATT+TGG | + | chr5.3:69265916-69265935 | MS.gene057884:CDS | 25.0% |
! | CATACTTATAAATTTGTGAG+GGG | - | chr5.3:69266030-69266049 | None:intergenic | 25.0% |
! | CATGTTATGCTAATATTGAA+CGG | + | chr5.3:69264759-69264778 | MS.gene057884:CDS | 25.0% |
! | CTATGATGAAAAGTCAAATA+TGG | + | chr5.3:69264838-69264857 | MS.gene057884:CDS | 25.0% |
! | GTTAGAATACACTAACAATT+TGG | + | chr5.3:69264802-69264821 | MS.gene057884:CDS | 25.0% |
! | TAAATCACATGACTGAAAAA+AGG | + | chr5.3:69265251-69265270 | MS.gene057884:intron | 25.0% |
! | TTACTCTCAAAATTGTTATG+CGG | + | chr5.3:69266890-69266909 | MS.gene057884:CDS | 25.0% |
!! | ACATGCTAATAGCTTTTTAA+CGG | - | chr5.3:69264744-69264763 | None:intergenic | 25.0% |
!! | CTTGTTAAATTTTGTGAAGA+AGG | + | chr5.3:69264865-69264884 | MS.gene057884:CDS | 25.0% |
!! | TCATTATCCTTATCTTTTCT+TGG | + | chr5.3:69267104-69267123 | MS.gene057884:CDS | 25.0% |
!!! | TAAACTTTTAGGTAATATGG+AGG | + | chr5.3:69265278-69265297 | MS.gene057884:intron | 25.0% |
!!! | TTCAAGTTTTGTTAAATCAG+AGG | - | chr5.3:69264564-69264583 | None:intergenic | 25.0% |
AACACTTGGAATAACTGAAT+TGG | + | chr5.3:69266861-69266880 | MS.gene057884:CDS | 30.0% | |
AAGCATATCACTTGGTATAT+GGG | + | chr5.3:69264516-69264535 | MS.gene057884:CDS | 30.0% | |
ACAATTCAAAGGGACAAATT+AGG | + | chr5.3:69265602-69265621 | MS.gene057884:CDS | 30.0% | |
ACTGAAAGTAAACTTGATCA+AGG | + | chr5.3:69267135-69267154 | MS.gene057884:CDS | 30.0% | |
AGTCATAACCAGAAAAACAT+TGG | - | chr5.3:69266998-69267017 | None:intergenic | 30.0% | |
ATACTACAAAGTCAAATTCG+TGG | + | chr5.3:69265785-69265804 | MS.gene057884:CDS | 30.0% | |
ATATGAAATTGAACCCTTAG+AGG | + | chr5.3:69264436-69264455 | MS.gene057884:CDS | 30.0% | |
ATCAAACTATGGAAAACATG+AGG | + | chr5.3:69265751-69265770 | MS.gene057884:CDS | 30.0% | |
ATTTAGTGACCAAGTTAGAA+AGG | + | chr5.3:69266336-69266355 | MS.gene057884:intron | 30.0% | |
CAAATGTTGCACAATTCAAA+GGG | + | chr5.3:69265592-69265611 | MS.gene057884:CDS | 30.0% | |
CATATGATGCTAGATGAATT+GGG | - | chr5.3:69265634-69265653 | None:intergenic | 30.0% | |
GAAACTCATTGTCAAAATGT+TGG | + | chr5.3:69264999-69265018 | MS.gene057884:CDS | 30.0% | |
GGAGTATAATATATGCAAAG+CGG | + | chr5.3:69266207-69266226 | MS.gene057884:intron | 30.0% | |
GTAATAATTCAACACCTTCA+AGG | - | chr5.3:69265562-69265581 | None:intergenic | 30.0% | |
TGAATTTGAATCACTTGGTT+TGG | - | chr5.3:69266509-69266528 | None:intergenic | 30.0% | |
TGATGAAAAGTCAAATATGG+AGG | + | chr5.3:69264841-69264860 | MS.gene057884:CDS | 30.0% | |
TGTTTATAATTGACAACGGA+GGG | + | chr5.3:69266186-69266205 | MS.gene057884:intron | 30.0% | |
TTATCAAATTCGCAACAGTT+TGG | - | chr5.3:69264476-69264495 | None:intergenic | 30.0% | |
TTGTTTATAATTGACAACGG+AGG | + | chr5.3:69266185-69266204 | MS.gene057884:intron | 30.0% | |
TTTGGTGAATTTGAATCACT+TGG | - | chr5.3:69266514-69266533 | None:intergenic | 30.0% | |
TTTGTTTCACTTTGTTGAGA+TGG | - | chr5.3:69266577-69266596 | None:intergenic | 30.0% | |
! | ACTTTTCATCATAGTCTTCT+GGG | - | chr5.3:69264832-69264851 | None:intergenic | 30.0% |
! | CTAATAGCTTTTTAACGGTT+TGG | - | chr5.3:69264739-69264758 | None:intergenic | 30.0% |
! | GTAGCACTGTATTTTTCATA+GGG | - | chr5.3:69264589-69264608 | None:intergenic | 30.0% |
! | GTTCAACATTGTCTTCATTT+TGG | - | chr5.3:69266555-69266574 | None:intergenic | 30.0% |
! | TAGCACTGTATTTTTCATAG+GGG | - | chr5.3:69264588-69264607 | None:intergenic | 30.0% |
! | TATGACTGTGATTTTTGTTG+CGG | + | chr5.3:69267011-69267030 | MS.gene057884:CDS | 30.0% |
! | TGTAGCACTGTATTTTTCAT+AGG | - | chr5.3:69264590-69264609 | None:intergenic | 30.0% |
!! | TAAGTGTTGAAACAATTGTG+AGG | - | chr5.3:69266687-69266706 | None:intergenic | 30.0% |
!! | TGATAAATCATCTTTGAGAC+AGG | + | chr5.3:69265991-69266010 | MS.gene057884:intron | 30.0% |
!! | TTCATTATCTTTGGCTTTCA+TGG | + | chr5.3:69266933-69266952 | MS.gene057884:CDS | 30.0% |
!!! | CTAGGTGGTAACATTTTTTT+CGG | + | chr5.3:69265197-69265216 | MS.gene057884:intron | 30.0% |
AAAAGGCAGATTCCTAGATA+AGG | - | chr5.3:69264369-69264388 | None:intergenic | 35.0% | |
AAAATTGTTATGCGGCTTCT+TGG | + | chr5.3:69266898-69266917 | MS.gene057884:CDS | 35.0% | |
AAACTATGGAAAACATGAGG+TGG | + | chr5.3:69265754-69265773 | MS.gene057884:CDS | 35.0% | |
AAGAATGATGATAAGCCGAA+GGG | + | chr5.3:69265130-69265149 | MS.gene057884:CDS | 35.0% | |
AAGGAATGTGAGTAGCTATA+AGG | + | chr5.3:69264406-69264425 | MS.gene057884:CDS | 35.0% | |
AAGGGTTCAATTTCATATCC+AGG | - | chr5.3:69264434-69264453 | None:intergenic | 35.0% | |
AATGTTTGCAGCTTCTTACA+TGG | + | chr5.3:69266419-69266438 | MS.gene057884:intron | 35.0% | |
AGCATATCACTTGGTATATG+GGG | + | chr5.3:69264517-69264536 | MS.gene057884:CDS | 35.0% | |
AGGCAACATTATGTTACATG+AGG | + | chr5.3:69264898-69264917 | MS.gene057884:CDS | 35.0% | |
ATTCATCTAGCATCATATGG+TGG | + | chr5.3:69265635-69265654 | MS.gene057884:CDS | 35.0% | |
CCAACTGAGTTCACTAATAA+CGG | - | chr5.3:69266971-69266990 | None:intergenic | 35.0% | |
CCAATTCATCTAGCATCATA+TGG | + | chr5.3:69265632-69265651 | MS.gene057884:CDS | 35.0% | |
CCATATGATGCTAGATGAAT+TGG | - | chr5.3:69265635-69265654 | None:intergenic | 35.0% | |
CGCTCTCATTTCATTATCTT+TGG | + | chr5.3:69266924-69266943 | MS.gene057884:CDS | 35.0% | |
CTTCACATTGCATCAAACTA+TGG | + | chr5.3:69265740-69265759 | MS.gene057884:CDS | 35.0% | |
CTTGAAACATTGCTTGACAT+AGG | - | chr5.3:69266774-69266793 | None:intergenic | 35.0% | |
CTTTGCTTTGGTTAACTAAG+TGG | - | chr5.3:69265898-69265917 | None:intergenic | 35.0% | |
GAAATCTGTACTTTACCTTG+CGG | + | chr5.3:69265057-69265076 | MS.gene057884:CDS | 35.0% | |
GAAGCATATCACTTGGTATA+TGG | + | chr5.3:69264515-69264534 | MS.gene057884:CDS | 35.0% | |
GATAAGCCTTCAGAAGAAAA+AGG | - | chr5.3:69264386-69264405 | None:intergenic | 35.0% | |
GCAAATGTTGCACAATTCAA+AGG | + | chr5.3:69265591-69265610 | MS.gene057884:CDS | 35.0% | |
GTTTCACTCTTTCTTTGCTT+TGG | - | chr5.3:69265910-69265929 | None:intergenic | 35.0% | |
TAAAACGTCAAAAGCTGTGA+GGG | - | chr5.3:69266079-69266098 | None:intergenic | 35.0% | |
TAAGAATGATGATAAGCCGA+AGG | + | chr5.3:69265129-69265148 | MS.gene057884:CDS | 35.0% | |
TAATGAGAAATGTACCGCAA+TGG | - | chr5.3:69267090-69267109 | None:intergenic | 35.0% | |
TACTAGAAAAGAAGCCAACT+TGG | + | chr5.3:69265477-69265496 | MS.gene057884:CDS | 35.0% | |
TATTAGTGAACTCAGTTGGT+TGG | + | chr5.3:69266972-69266991 | MS.gene057884:CDS | 35.0% | |
TCGGCTTATCATCATTCTTA+GGG | - | chr5.3:69265129-69265148 | None:intergenic | 35.0% | |
TGAAATGTCAACCAAAACAG+AGG | + | chr5.3:69266606-69266625 | MS.gene057884:CDS | 35.0% | |
TGAACGGCATGATGTAAAAA+TGG | + | chr5.3:69264775-69264794 | MS.gene057884:CDS | 35.0% | |
TTCGGCTTATCATCATTCTT+AGG | - | chr5.3:69265130-69265149 | None:intergenic | 35.0% | |
! | AAAGTGTCAAGCATTTCTGT+GGG | - | chr5.3:69265704-69265723 | None:intergenic | 35.0% |
! | AATCTGCCTTTTTCTTCTGA+AGG | + | chr5.3:69264377-69264396 | MS.gene057884:CDS | 35.0% |
! | GACTTTTCATCATAGTCTTC+TGG | - | chr5.3:69264833-69264852 | None:intergenic | 35.0% |
! | TGCTACCATCATACTCTTTT+GGG | + | chr5.3:69266837-69266856 | MS.gene057884:CDS | 35.0% |
! | TTTCTTCTGAAGGCTTATCA+AGG | + | chr5.3:69264387-69264406 | MS.gene057884:CDS | 35.0% |
!! | AAAAGTGTCAAGCATTTCTG+TGG | - | chr5.3:69265705-69265724 | None:intergenic | 35.0% |
!! | AGTTGGCTTCTTTTCTAGTA+TGG | - | chr5.3:69265477-69265496 | None:intergenic | 35.0% |
!! | TATGTGACAAGAGCATTAGT+GGG | + | chr5.3:69264927-69264946 | MS.gene057884:CDS | 35.0% |
!! | TTATGTGACAAGAGCATTAG+TGG | + | chr5.3:69264926-69264945 | MS.gene057884:CDS | 35.0% |
!! | TTGATGATGATGGAAGGAAA+AGG | - | chr5.3:69267059-69267078 | None:intergenic | 35.0% |
!! | TTTCTGTTTCTCCTCTGTTT+TGG | - | chr5.3:69266620-69266639 | None:intergenic | 35.0% |
!!! | AGTATGGTTTTGAGCATTTC+TGG | - | chr5.3:69265461-69265480 | None:intergenic | 35.0% |
!!! | ATACCACTTTTTTCCTCCAA+TGG | - | chr5.3:69264322-69264341 | None:intergenic | 35.0% |
!!! | TACCACTTTTTTCCTCCAAT+GGG | - | chr5.3:69264321-69264340 | None:intergenic | 35.0% |
!!! | TGGTAACATTTTTTTCGGCA+GGG | + | chr5.3:69265202-69265221 | MS.gene057884:intron | 35.0% |
AAAACGTCAAAAGCTGTGAG+GGG | - | chr5.3:69266078-69266097 | None:intergenic | 40.0% | |
AAGGATCTCAGTTACCTCTA+AGG | - | chr5.3:69264453-69264472 | None:intergenic | 40.0% | |
ACTAAGTGGTACACAGTTCT+AGG | - | chr5.3:69265884-69265903 | None:intergenic | 40.0% | |
ACTTCTTCACTACTTCCACA+TGG | - | chr5.3:69265661-69265680 | None:intergenic | 40.0% | |
AGGAGATACTCCTTTGCATT+TGG | + | chr5.3:69265841-69265860 | MS.gene057884:CDS | 40.0% | |
AGGATCTCAGTTACCTCTAA+GGG | - | chr5.3:69264452-69264471 | None:intergenic | 40.0% | |
ATAGTCGATGCGTAATGAAG+AGG | - | chr5.3:69265533-69265552 | None:intergenic | 40.0% | |
ATTCAAGGGACAAACATCGA+AGG | + | chr5.3:69265504-69265523 | MS.gene057884:CDS | 40.0% | |
CAAATTCGCAACAGTTTGGA+AGG | - | chr5.3:69264472-69264491 | None:intergenic | 40.0% | |
CCGTTATTAGTGAACTCAGT+TGG | + | chr5.3:69266968-69266987 | MS.gene057884:CDS | 40.0% | |
CGTGATGCCAAGAAAAGATA+AGG | - | chr5.3:69267114-69267133 | None:intergenic | 40.0% | |
CTAAAACGTCAAAAGCTGTG+AGG | - | chr5.3:69266080-69266099 | None:intergenic | 40.0% | |
CTACATATTGCAGCTTGGAA+TGG | + | chr5.3:69264605-69264624 | MS.gene057884:CDS | 40.0% | |
GAGGAATGTAGCAAAGTCTT+TGG | - | chr5.3:69264545-69264564 | None:intergenic | 40.0% | |
GAGTATGATGGTAGCACTAA+TGG | - | chr5.3:69266833-69266852 | None:intergenic | 40.0% | |
GCATATCACTTGGTATATGG+GGG | + | chr5.3:69264518-69264537 | MS.gene057884:CDS | 40.0% | |
GCTTAGTGAAGCATATCACT+TGG | + | chr5.3:69264508-69264527 | MS.gene057884:CDS | 40.0% | |
GGCATGATGTAAAAATGGCA+TGG | + | chr5.3:69264780-69264799 | MS.gene057884:CDS | 40.0% | |
GTGAAGAAGGAGAATGTTCA+AGG | + | chr5.3:69264878-69264897 | MS.gene057884:CDS | 40.0% | |
TACCTTGATTGCTGCTACAA+CGG | - | chr5.3:69265164-69265183 | None:intergenic | 40.0% | |
TCGACTATAGGTTACCTTGA+AGG | + | chr5.3:69265545-69265564 | MS.gene057884:CDS | 40.0% | |
TTCGATGTTTGTCCCTTGAA+TGG | - | chr5.3:69265505-69265524 | None:intergenic | 40.0% | |
! | ATACTCTTTTGGGCAACACT+TGG | + | chr5.3:69266847-69266866 | MS.gene057884:CDS | 40.0% |
! | CTCACAGCTTTTGACGTTTT+AGG | + | chr5.3:69266078-69266097 | MS.gene057884:intron | 40.0% |
! | GTGCTACCATCATACTCTTT+TGG | + | chr5.3:69266836-69266855 | MS.gene057884:CDS | 40.0% |
! | TGAAGTGCTAGTACTCTTCT+AGG | - | chr5.3:69266478-69266497 | None:intergenic | 40.0% |
! | TGTTGCCCAAAAGAGTATGA+TGG | - | chr5.3:69266845-69266864 | None:intergenic | 40.0% |
! | TTGATCAAGGTGTTAATCCG+TGG | + | chr5.3:69267148-69267167 | MS.gene057884:CDS | 40.0% |
!! | ATGTGACAAGAGCATTAGTG+GGG | + | chr5.3:69264928-69264947 | MS.gene057884:CDS | 40.0% |
!! | CAAGAGCTGTTTCGTTGTTT+TGG | - | chr5.3:69265946-69265965 | None:intergenic | 40.0% |
!! | CTTCATTACGCATCGACTAT+AGG | + | chr5.3:69265533-69265552 | MS.gene057884:CDS | 40.0% |
!! | TGCTAGTTGATGATGATGGA+AGG | - | chr5.3:69267065-69267084 | None:intergenic | 40.0% |
!! | TTATCTTTGGCTTTCATGGC+TGG | + | chr5.3:69266937-69266956 | MS.gene057884:CDS | 40.0% |
!! | TTGGTTGGCCAATGTTTTTC+TGG | + | chr5.3:69266987-69267006 | MS.gene057884:CDS | 40.0% |
!!! | ACCACTTTTTTCCTCCAATG+GGG | - | chr5.3:69264320-69264339 | None:intergenic | 40.0% |
!!! | GTGGTAACATTTTTTTCGGC+AGG | + | chr5.3:69265201-69265220 | MS.gene057884:intron | 40.0% |
ACCTCTTGCAGCAACATGTA+AGG | - | chr5.3:69264708-69264727 | None:intergenic | 45.0% | |
ACCTTGATTGCTGCTACAAC+GGG | - | chr5.3:69265163-69265182 | None:intergenic | 45.0% | |
AGCCAACTTGGATCCATTCA+AGG | + | chr5.3:69265489-69265508 | MS.gene057884:CDS | 45.0% | |
CAGTGCTACATATTGCAGCT+TGG | + | chr5.3:69264600-69264619 | MS.gene057884:CDS | 45.0% | |
CATCAACTAGCAAGCCATTG+CGG | + | chr5.3:69267073-69267092 | MS.gene057884:CDS | 45.0% | |
CATTGTTAGTGCACTCTACG+AGG | + | chr5.3:69265967-69265986 | MS.gene057884:CDS | 45.0% | |
GATCTTGCAGCCAAATGCAA+AGG | - | chr5.3:69265854-69265873 | None:intergenic | 45.0% | |
GCCAACTTGGATCCATTCAA+GGG | + | chr5.3:69265490-69265509 | MS.gene057884:CDS | 45.0% | |
GGACGCAGTCAAACTAATCT+TGG | + | chr5.3:69265096-69265115 | MS.gene057884:CDS | 45.0% | |
GTGAGTAGCTATAAGGAACC+TGG | + | chr5.3:69264413-69264432 | MS.gene057884:CDS | 45.0% | |
TCAAGCATTTCTGTGGGATC+TGG | - | chr5.3:69265698-69265717 | None:intergenic | 45.0% | |
TCCCTTGAATGGATCCAAGT+TGG | - | chr5.3:69265494-69265513 | None:intergenic | 45.0% | |
TTACATGTTGCTGCAAGAGG+TGG | + | chr5.3:69264707-69264726 | MS.gene057884:CDS | 45.0% | |
TTTACCTTGCGGTCGAGAAT+GGG | + | chr5.3:69265068-69265087 | MS.gene057884:CDS | 45.0% | |
! | AGCAGGATGAAGCCTTATCT+AGG | + | chr5.3:69264354-69264373 | MS.gene057884:CDS | 45.0% |
!! | GGCTTGCTAGTTGATGATGA+TGG | - | chr5.3:69267069-69267088 | None:intergenic | 45.0% |
!!! | TTTTTTTCGGCAGGGAAGCT+AGG | + | chr5.3:69265210-69265229 | MS.gene057884:intron | 45.0% |
!! | TTTAAATCAAATTAAAATTT+AGG | - | chr5.3:69265313-69265332 | None:intergenic | 5.0% |
ACAACGGGCGATAATCCCTT+CGG | - | chr5.3:69265148-69265167 | None:intergenic | 50.0% | |
AGCATCATATGGTGGCCATG+TGG | + | chr5.3:69265643-69265662 | MS.gene057884:CDS | 50.0% | |
CTTTACCTTGCGGTCGAGAA+TGG | + | chr5.3:69265067-69265086 | MS.gene057884:CDS | 50.0% | |
GATAAGGCTTCATCCTGCTC+TGG | - | chr5.3:69264353-69264372 | None:intergenic | 50.0% | |
GCCCCATTGGAGGAAAAAAG+TGG | + | chr5.3:69264316-69264335 | MS.gene057884:CDS | 50.0% | |
GCCTTACATGTTGCTGCAAG+AGG | + | chr5.3:69264704-69264723 | MS.gene057884:CDS | 50.0% | |
TGGACTGCACTTAAAGCTGC+TGG | + | chr5.3:69266439-69266458 | MS.gene057884:CDS | 50.0% | |
TTACCTTGCGGTCGAGAATG+GGG | + | chr5.3:69265069-69265088 | MS.gene057884:CDS | 50.0% | |
! | GCTTTTCCATCTGCTTCACC+TGG | - | chr5.3:69266745-69266764 | None:intergenic | 50.0% |
!!! | GCAGCATGTTTTGCTGTTCC+AGG | + | chr5.3:69266724-69266743 | MS.gene057884:CDS | 50.0% |
AGGCTTCATCCTGCTCTGGT+TGG | - | chr5.3:69264349-69264368 | None:intergenic | 55.0% | |
GCCCGTTGTAGCAGCAATCA+AGG | + | chr5.3:69265159-69265178 | MS.gene057884:CDS | 55.0% | |
GCTGTTCCAGGTGAAGCAGA+TGG | + | chr5.3:69266736-69266755 | MS.gene057884:CDS | 55.0% | |
GGCTTCATCCTGCTCTGGTT+GGG | - | chr5.3:69264348-69264367 | None:intergenic | 55.0% | |
TTCATCCTGCTCTGGTTGGG+CGG | - | chr5.3:69264345-69264364 | None:intergenic | 55.0% | |
TGCGGTCGAGAATGGGGACA+AGG | + | chr5.3:69265075-69265094 | MS.gene057884:CDS | 60.0% | |
TGTCCCCATTCTCGACCGCA+AGG | - | chr5.3:69265075-69265094 | None:intergenic | 60.0% | |
GGTATCCGCCCAACCAGAGC+AGG | + | chr5.3:69264337-69264356 | MS.gene057884:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 69264314 | 69267182 | 69264314 | ID=MS.gene057884 |
chr5.3 | mRNA | 69264314 | 69267182 | 69264314 | ID=MS.gene057884.t1;Parent=MS.gene057884 |
chr5.3 | exon | 69264314 | 69265180 | 69264314 | ID=MS.gene057884.t1.exon1;Parent=MS.gene057884.t1 |
chr5.3 | CDS | 69264314 | 69265180 | 69264314 | ID=cds.MS.gene057884.t1;Parent=MS.gene057884.t1 |
chr5.3 | exon | 69265428 | 69265988 | 69265428 | ID=MS.gene057884.t1.exon2;Parent=MS.gene057884.t1 |
chr5.3 | CDS | 69265428 | 69265988 | 69265428 | ID=cds.MS.gene057884.t1;Parent=MS.gene057884.t1 |
chr5.3 | exon | 69266430 | 69267182 | 69266430 | ID=MS.gene057884.t1.exon3;Parent=MS.gene057884.t1 |
chr5.3 | CDS | 69266430 | 69267182 | 69266430 | ID=cds.MS.gene057884.t1;Parent=MS.gene057884.t1 |
Gene Sequence |
Protein sequence |