Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67840.t1 | AES64910.2 | 87.9 | 396 | 48 | 0 | 55 | 450 | 1 | 396 | 3.70E-197 | 698 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67840.t1 | Q8LPS2 | 22.4 | 566 | 317 | 17 | 60 | 548 | 91 | 611 | 3.1e-11 | 71.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67840.t1 | G7IL25 | 87.9 | 396 | 48 | 0 | 55 | 450 | 1 | 396 | 2.6e-197 | 698.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67840.t1 | MTR_2g033050 | 93.734 | 399 | 25 | 0 | 55 | 453 | 1 | 399 | 0.0 | 782 |
MS.gene67840.t1 | MTR_5g085480 | 68.822 | 433 | 129 | 4 | 8 | 439 | 2 | 429 | 0.0 | 593 |
MS.gene67840.t1 | MTR_5g085480 | 74.167 | 120 | 31 | 0 | 429 | 548 | 528 | 647 | 4.61e-39 | 152 |
MS.gene67840.t1 | MTR_5g085830 | 62.555 | 454 | 150 | 9 | 3 | 451 | 36 | 474 | 0.0 | 534 |
MS.gene67840.t1 | MTR_5g085810 | 57.692 | 494 | 169 | 9 | 7 | 470 | 36 | 519 | 1.02e-180 | 527 |
MS.gene67840.t1 | MTR_5g085490 | 71.698 | 265 | 71 | 3 | 2 | 263 | 27 | 290 | 6.51e-125 | 369 |
MS.gene67840.t1 | MTR_5g085480 | 68.015 | 272 | 83 | 3 | 169 | 439 | 1 | 269 | 1.77e-124 | 377 |
MS.gene67840.t1 | MTR_5g085480 | 74.167 | 120 | 31 | 0 | 429 | 548 | 368 | 487 | 1.31e-39 | 152 |
MS.gene67840.t1 | MTR_5g085500 | 85.714 | 168 | 24 | 0 | 283 | 450 | 2 | 169 | 9.02e-97 | 303 |
MS.gene67840.t1 | MTR_5g085500 | 73.134 | 134 | 30 | 1 | 415 | 548 | 289 | 416 | 5.76e-53 | 187 |
MS.gene67840.t1 | MTR_5g085520 | 67.692 | 195 | 61 | 2 | 62 | 254 | 1 | 195 | 3.38e-84 | 261 |
MS.gene67840.t1 | MTR_5g085440 | 77.465 | 142 | 32 | 0 | 2 | 143 | 23 | 164 | 8.80e-71 | 231 |
MS.gene67840.t1 | MTR_5g085440 | 42.807 | 285 | 99 | 8 | 310 | 548 | 45 | 311 | 1.15e-51 | 181 |
MS.gene67840.t1 | MTR_2g033045 | 90.909 | 99 | 9 | 0 | 450 | 548 | 78 | 176 | 7.82e-53 | 182 |
MS.gene67840.t1 | MTR_5g085530 | 80.282 | 71 | 13 | 1 | 262 | 331 | 2 | 72 | 3.96e-32 | 119 |
MS.gene67840.t1 | MTR_2g096760 | 32.222 | 180 | 110 | 5 | 244 | 414 | 3 | 179 | 1.29e-15 | 79.7 |
MS.gene67840.t1 | MTR_1g069110 | 34.503 | 171 | 108 | 3 | 268 | 436 | 30 | 198 | 3.10e-15 | 78.6 |
MS.gene67840.t1 | MTR_1g115575 | 24.194 | 496 | 306 | 18 | 94 | 548 | 70 | 536 | 4.60e-13 | 72.4 |
MS.gene67840.t1 | MTR_1g032100 | 28.846 | 260 | 172 | 8 | 209 | 464 | 47 | 297 | 1.70e-12 | 70.5 |
MS.gene67840.t1 | MTR_7g100430 | 23.770 | 488 | 314 | 15 | 94 | 548 | 65 | 527 | 2.18e-12 | 70.1 |
MS.gene67840.t1 | MTR_2g101310 | 27.979 | 193 | 120 | 6 | 266 | 452 | 152 | 331 | 5.04e-11 | 65.9 |
MS.gene67840.t1 | MTR_2g101310 | 27.979 | 193 | 120 | 6 | 266 | 452 | 152 | 331 | 8.14e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67840.t1 | AT4G03490 | 28.653 | 527 | 282 | 17 | 64 | 542 | 27 | 507 | 4.65e-41 | 157 |
MS.gene67840.t1 | AT4G03490 | 28.653 | 527 | 282 | 17 | 64 | 542 | 17 | 497 | 6.51e-41 | 157 |
MS.gene67840.t1 | AT4G03460 | 28.102 | 548 | 279 | 13 | 64 | 546 | 81 | 578 | 7.52e-40 | 154 |
MS.gene67840.t1 | AT4G03460 | 27.513 | 567 | 295 | 14 | 46 | 546 | 30 | 546 | 1.40e-37 | 147 |
MS.gene67840.t1 | AT1G03670 | 26.855 | 566 | 262 | 19 | 64 | 548 | 73 | 567 | 7.21e-36 | 142 |
MS.gene67840.t1 | AT1G03670 | 27.027 | 370 | 201 | 14 | 94 | 435 | 69 | 397 | 2.73e-24 | 107 |
MS.gene67840.t1 | AT4G03440 | 25.671 | 596 | 308 | 17 | 59 | 551 | 107 | 670 | 3.63e-32 | 132 |
MS.gene67840.t1 | AT4G03440 | 25.671 | 596 | 308 | 17 | 59 | 551 | 107 | 670 | 3.63e-32 | 132 |
MS.gene67840.t1 | AT4G03440 | 25.671 | 596 | 308 | 17 | 59 | 551 | 114 | 677 | 3.94e-32 | 132 |
MS.gene67840.t1 | AT4G03500 | 29.679 | 374 | 212 | 11 | 64 | 435 | 80 | 404 | 7.85e-32 | 130 |
MS.gene67840.t1 | AT4G03500 | 29.679 | 374 | 212 | 11 | 64 | 435 | 80 | 404 | 7.85e-32 | 130 |
MS.gene67840.t1 | AT4G03500 | 29.679 | 374 | 212 | 11 | 64 | 435 | 103 | 427 | 9.31e-32 | 130 |
MS.gene67840.t1 | AT4G03490 | 26.288 | 563 | 287 | 19 | 64 | 542 | 37 | 555 | 5.14e-29 | 122 |
MS.gene67840.t1 | AT4G03490 | 26.288 | 563 | 287 | 19 | 64 | 542 | 37 | 555 | 6.51e-29 | 121 |
MS.gene67840.t1 | AT4G03490 | 26.288 | 563 | 287 | 19 | 64 | 542 | 27 | 545 | 7.00e-29 | 121 |
MS.gene67840.t1 | AT4G03450 | 30.769 | 377 | 207 | 14 | 67 | 435 | 75 | 405 | 1.31e-28 | 120 |
MS.gene67840.t1 | AT4G03450 | 30.769 | 377 | 207 | 14 | 67 | 435 | 75 | 405 | 1.56e-28 | 120 |
MS.gene67840.t1 | AT4G03480 | 29.078 | 423 | 232 | 15 | 55 | 436 | 142 | 537 | 7.36e-28 | 118 |
MS.gene67840.t1 | AT4G03480 | 28.404 | 426 | 234 | 14 | 55 | 436 | 142 | 540 | 1.06e-27 | 118 |
MS.gene67840.t1 | AT4G14390 | 24.014 | 558 | 318 | 12 | 54 | 548 | 123 | 637 | 4.15e-27 | 116 |
MS.gene67840.t1 | AT4G03470 | 27.532 | 385 | 228 | 11 | 55 | 436 | 111 | 447 | 8.53e-27 | 115 |
MS.gene67840.t1 | AT4G14390 | 24.194 | 558 | 316 | 13 | 54 | 548 | 123 | 636 | 1.42e-26 | 115 |
MS.gene67840.t1 | AT4G14390 | 24.339 | 567 | 320 | 14 | 54 | 555 | 104 | 626 | 1.89e-26 | 114 |
MS.gene67840.t1 | AT4G14400 | 26.000 | 550 | 303 | 16 | 60 | 541 | 25 | 538 | 3.22e-26 | 113 |
MS.gene67840.t1 | AT4G14400 | 26.000 | 550 | 303 | 16 | 60 | 541 | 25 | 538 | 3.22e-26 | 113 |
MS.gene67840.t1 | AT4G14400 | 26.000 | 550 | 303 | 16 | 60 | 541 | 91 | 604 | 3.24e-26 | 113 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G05040 | 26.747 | 415 | 241 | 11 | 37 | 441 | 95 | 456 | 2.41e-24 | 107 |
MS.gene67840.t1 | AT4G14390 | 25.445 | 393 | 236 | 9 | 54 | 436 | 104 | 449 | 1.18e-21 | 99.0 |
MS.gene67840.t1 | AT3G12360 | 23.614 | 487 | 315 | 16 | 95 | 548 | 60 | 522 | 9.38e-13 | 71.2 |
MS.gene67840.t1 | AT3G12360 | 23.566 | 488 | 316 | 16 | 94 | 548 | 71 | 534 | 1.24e-12 | 70.9 |
MS.gene67840.t1 | AT5G02620 | 27.778 | 288 | 167 | 9 | 167 | 442 | 18 | 276 | 1.49e-11 | 67.4 |
MS.gene67840.t1 | AT5G02620 | 27.778 | 288 | 167 | 9 | 167 | 442 | 18 | 276 | 1.49e-11 | 67.4 |
MS.gene67840.t1 | AT5G02620 | 27.778 | 288 | 167 | 9 | 167 | 442 | 18 | 276 | 1.49e-11 | 67.4 |
MS.gene67840.t1 | AT5G60070 | 27.799 | 259 | 164 | 10 | 216 | 467 | 70 | 312 | 3.29e-11 | 66.2 |
MS.gene67840.t1 | AT5G54710 | 21.220 | 410 | 279 | 9 | 49 | 436 | 3 | 390 | 4.13e-11 | 66.2 |
MS.gene67840.t1 | AT2G01680 | 25.217 | 230 | 163 | 5 | 212 | 439 | 52 | 274 | 6.50e-11 | 65.5 |
MS.gene67840.t1 | AT3G09550 | 21.712 | 479 | 313 | 13 | 94 | 537 | 92 | 543 | 8.01e-11 | 65.1 |
Find 84 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCCTCCGGCTTAACATTT+TGG | 0.090871 | 2.4:-57417539 | None:intergenic |
CCATATGATGCTAGATAAAT+TGG | 0.105662 | 2.4:-57418166 | None:intergenic |
TTGGTTGGCAAATGTGTTTC+TGG | 0.172829 | 2.4:+57419677 | MS.gene67840:CDS |
GTGCTACTATCATACTCTTT+TGG | 0.211119 | 2.4:+57419526 | MS.gene67840:CDS |
TTATCGAATTCGCAACATTT+TGG | 0.259812 | 2.4:-57416877 | None:intergenic |
ACAATTCAAAGGGACAAATT+AGG | 0.272197 | 2.4:+57418136 | MS.gene67840:CDS |
CTTCACGTTGCATCAAAATA+TGG | 0.272560 | 2.4:+57418274 | MS.gene67840:CDS |
CAAGAGCTGTTTCGTTGTTT+TGG | 0.276243 | 2.4:-57418477 | None:intergenic |
AAAATGGTCATGCCGCTTCT+TGG | 0.298384 | 2.4:+57419588 | MS.gene67840:CDS |
TTCATTATCCTTGGCTTTCA+CGG | 0.312335 | 2.4:+57419623 | MS.gene67840:CDS |
GAAGCATATGAGTTGGTATA+TGG | 0.317565 | 2.4:+57416919 | MS.gene67840:CDS |
CGCTCTCATTTCATTATCCT+TGG | 0.341201 | 2.4:+57419614 | MS.gene67840:CDS |
AGAATACACTAAAAGAAATA+AGG | 0.345078 | 2.4:+57417209 | MS.gene67840:CDS |
GAGAGTTCAGTTTCAAGTTC+AGG | 0.349217 | 2.4:-57416835 | None:intergenic |
GTTTCACTCTCTCTTTGCTT+TGG | 0.350365 | 2.4:-57418441 | None:intergenic |
AACACTTGGATTAACTGAAT+TGG | 0.355598 | 2.4:+57419551 | MS.gene67840:CDS |
TTTCGTGTCTGTCCCTTGAA+TGG | 0.356508 | 2.4:-57418036 | None:intergenic |
CTGTTATCAGTGAACTTACT+TGG | 0.359026 | 2.4:+57419658 | MS.gene67840:CDS |
AGAGAGAGTGAAACTTGATT+TGG | 0.362346 | 2.4:+57418450 | MS.gene67840:CDS |
CGTGATTCTGCTTCTGCATC+AGG | 0.363568 | 2.4:-57417584 | None:intergenic |
TTATCCTTGGCTTTCACGGC+TGG | 0.364022 | 2.4:+57419627 | MS.gene67840:CDS |
CCAATTTATCTAGCATCATA+TGG | 0.366017 | 2.4:+57418166 | MS.gene67840:CDS |
TTAAATTTGAACAAAAGCTT+TGG | 0.366914 | 2.4:-57417069 | None:intergenic |
CTTCATTACGCAGCATCTAT+AGG | 0.368482 | 2.4:+57418067 | MS.gene67840:CDS |
CTATGATGAAAAGTCAAATA+TGG | 0.374976 | 2.4:+57417245 | MS.gene67840:CDS |
AGGAGATACCCATTTGCATT+TGG | 0.375358 | 2.4:+57418375 | MS.gene67840:CDS |
GAGTATGATAGTAGCACTAA+TGG | 0.402123 | 2.4:-57419520 | None:intergenic |
ATCTCGCAGCCAAATGCAAA+TGG | 0.411669 | 2.4:-57418384 | None:intergenic |
TGGAGTTTCAACGAATTTGT+TGG | 0.413450 | 2.4:+57416939 | MS.gene67840:CDS |
ATTCTACAAAGTCAAATTCC+TGG | 0.419120 | 2.4:+57418319 | MS.gene67840:CDS |
GCAGCATGTTTAGCTGTTCC+AGG | 0.421814 | 2.4:+57419414 | MS.gene67840:CDS |
ACTAAGTAGTACACAGTTGT+AGG | 0.432418 | 2.4:-57418415 | None:intergenic |
TACAAAACTAAAGATTTGTC+TGG | 0.438776 | 2.4:+57417387 | MS.gene67840:CDS |
AGATTTGTCTGGATACTCAT+TGG | 0.440290 | 2.4:+57417398 | MS.gene67840:CDS |
TCAAGCATCTCTGTGGGATC+AGG | 0.447170 | 2.4:-57418229 | None:intergenic |
GTAATAATTCAACACCTTCA+AGG | 0.447605 | 2.4:-57418093 | None:intergenic |
GTGACAAAAGCAATATGAGC+AGG | 0.458677 | 2.4:+57417337 | MS.gene67840:CDS |
GAAGGTGTTGAATTATTACT+TGG | 0.460344 | 2.4:+57418097 | MS.gene67840:CDS |
GTGAAGGAGAAGAATGTTCA+AGG | 0.463351 | 2.4:+57417285 | MS.gene67840:CDS |
ATCAGGATAGCTGCTCCAAC+AGG | 0.464368 | 2.4:-57417567 | None:intergenic |
GCAAATGTTGCACAATTCAA+AGG | 0.478259 | 2.4:+57418125 | MS.gene67840:CDS |
TATCAGTGAACTTACTTGGT+TGG | 0.494896 | 2.4:+57419662 | MS.gene67840:CDS |
TTTATCATCTTATCAAGTCC+AGG | 0.495253 | 2.4:-57418337 | None:intergenic |
GCATCTATAGGTTACCTTGA+AGG | 0.502099 | 2.4:+57418079 | MS.gene67840:CDS |
TACTAGAAAACAAACCAACT+TGG | 0.508083 | 2.4:+57418011 | MS.gene67840:CDS |
GCATTACATGTTGCTGCAAA+TGG | 0.508699 | 2.4:+57417108 | MS.gene67840:CDS |
TGATAAATCATCTTTGAGAC+AGG | 0.508726 | 2.4:+57418525 | MS.gene67840:CDS |
AACCAACTTGGATCCATTCA+AGG | 0.510363 | 2.4:+57418023 | MS.gene67840:CDS |
TCCCTTGAATGGATCCAAGT+TGG | 0.514316 | 2.4:-57418025 | None:intergenic |
CATATGATGCTAGATAAATT+GGG | 0.525715 | 2.4:-57418165 | None:intergenic |
ATCAAAATATGGAAAATATG+AGG | 0.526032 | 2.4:+57418285 | MS.gene67840:CDS |
GCTTAATGAAGCATATGAGT+TGG | 0.526786 | 2.4:+57416912 | MS.gene67840:CDS |
CTACATATTGCAGCTTGGTA+TGG | 0.527273 | 2.4:+57417009 | MS.gene67840:CDS |
CAAATGTTGCACAATTCAAA+GGG | 0.536101 | 2.4:+57418126 | MS.gene67840:CDS |
TTTCCTTGCTGTTGTAAAAG+GGG | 0.555064 | 2.4:+57417479 | MS.gene67840:CDS |
TCTCGCAGCCAAATGCAAAT+GGG | 0.561018 | 2.4:-57418383 | None:intergenic |
CCCCAAAATGTTAAGCCGGA+GGG | 0.569320 | 2.4:+57417537 | MS.gene67840:CDS |
CCGGAGGGATTATCGCCTGT+TGG | 0.571141 | 2.4:+57417552 | MS.gene67840:CDS |
TGCTGTTGTAAAAGGGGACA+AGG | 0.583573 | 2.4:+57417485 | MS.gene67840:CDS |
ATAGATGCTGCGTAATGAAG+AGG | 0.590428 | 2.4:-57418064 | None:intergenic |
AGATATTATTAATCATGCAA+AGG | 0.594423 | 2.4:+57417446 | MS.gene67840:CDS |
TGACAAAAGCAATATGAGCA+GGG | 0.597098 | 2.4:+57417338 | MS.gene67840:CDS |
CAAATTATGCGAATATTGAA+CGG | 0.599636 | 2.4:+57417163 | MS.gene67840:CDS |
GCTGTTCCAGGTGAAGCAGA+AGG | 0.600903 | 2.4:+57419426 | MS.gene67840:CDS |
CATGGAACATTGCATGACAT+AGG | 0.603090 | 2.4:-57419461 | None:intergenic |
ATGAGAGCGATTCCAAGAAG+CGG | 0.617860 | 2.4:-57419600 | None:intergenic |
CAGTGCTACATATTGCAGCT+TGG | 0.620056 | 2.4:+57417004 | MS.gene67840:CDS |
AAGACCAGCCGTGAAAGCCA+AGG | 0.623205 | 2.4:-57419631 | None:intergenic |
CCAACAGGCGATAATCCCTC+CGG | 0.625624 | 2.4:-57417552 | None:intergenic |
TGATGAAGATAATGAAAACA+TGG | 0.628001 | 2.4:-57419479 | None:intergenic |
CTGATGCAGAAGCAGAATCA+CGG | 0.632234 | 2.4:+57417585 | MS.gene67840:CDS |
AGAAGTGTCAAGCATCTCTG+TGG | 0.632597 | 2.4:-57418236 | None:intergenic |
ACCAACTTGGATCCATTCAA+GGG | 0.638851 | 2.4:+57418024 | MS.gene67840:CDS |
AATGCACATGGATTATGGGA+CGG | 0.645078 | 2.4:-57419739 | None:intergenic |
GAAGTGTCAAGCATCTCTGT+GGG | 0.645090 | 2.4:-57418235 | None:intergenic |
TGATGAAAAGTCAAATATGG+AGG | 0.647702 | 2.4:+57417248 | MS.gene67840:CDS |
TTACATGTTGCTGCAAATGG+TGG | 0.653269 | 2.4:+57417111 | MS.gene67840:CDS |
AAAATATGGAAAATATGAGG+TGG | 0.653988 | 2.4:+57418288 | MS.gene67840:CDS |
ATTCAAGGGACAGACACGAA+AGG | 0.655159 | 2.4:+57418038 | MS.gene67840:CDS |
AATGAATGTTAGTAACGATG+AGG | 0.663276 | 2.4:+57416810 | None:intergenic |
AGCATCATATGGTGGCCGTG+TGG | 0.669028 | 2.4:+57418177 | MS.gene67840:CDS |
AGGCAACACTATGTTACATG+AGG | 0.678880 | 2.4:+57417305 | MS.gene67840:CDS |
ATTTATCTAGCATCATATGG+TGG | 0.680345 | 2.4:+57418169 | MS.gene67840:CDS |
ACTTCTTCACTACTTCCACA+CGG | 0.688873 | 2.4:-57418192 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAAATTTTTTTTTTTTT+AGG | + | chr2.4:57418935-57418954 | MS.gene67840:intron | 0.0% |
!! | ATAAATCAAAAAGATAATAA+AGG | + | chr2.4:57418355-57418374 | MS.gene67840:CDS | 10.0% |
!! | TATAAGTAAATTTAAATCAA+TGG | + | chr2.4:57418579-57418598 | MS.gene67840:intron | 10.0% |
!! | GATCAAAATAAAAATGATTT+AGG | - | chr2.4:57419144-57419163 | None:intergenic | 15.0% |
!! | TGAAAAAAGTTAAAAGAAAA+AGG | + | chr2.4:57419062-57419081 | MS.gene67840:intron | 15.0% |
!! | AGAATACACTAAAAGAAATA+AGG | + | chr2.4:57417209-57417228 | MS.gene67840:CDS | 20.0% |
!! | AGATATTATTAATCATGCAA+AGG | + | chr2.4:57417446-57417465 | MS.gene67840:CDS | 20.0% |
!! | ATCAAAATATGGAAAATATG+AGG | + | chr2.4:57418285-57418304 | MS.gene67840:CDS | 20.0% |
!! | ATTTAAATCAATGGTTAAAC+AGG | + | chr2.4:57418588-57418607 | MS.gene67840:intron | 20.0% |
!! | TTAAATTTGAACAAAAGCTT+TGG | - | chr2.4:57417072-57417091 | None:intergenic | 20.0% |
!!! | ATGTTTCTATAAACTTGTTA+TGG | + | chr2.4:57417800-57417819 | MS.gene67840:intron | 20.0% |
!!! | GAATTAGGATTATTTTTGAA+TGG | - | chr2.4:57419173-57419192 | None:intergenic | 20.0% |
!!! | TGAACTAAAAGAAAAAGTAT+TGG | + | chr2.4:57419326-57419345 | MS.gene67840:intron | 20.0% |
!!! | TTTTTATCTGATTCTTCTTT+TGG | - | chr2.4:57419282-57419301 | None:intergenic | 20.0% |
! | AAAATATGGAAAATATGAGG+TGG | + | chr2.4:57418288-57418307 | MS.gene67840:CDS | 25.0% |
! | AACCTAAATATAAAGGTTTC+AGG | + | chr2.4:57419025-57419044 | MS.gene67840:intron | 25.0% |
! | AAGAAGAAAAATGAATAAGG+TGG | - | chr2.4:57419719-57419738 | None:intergenic | 25.0% |
! | CAAATTATGCGAATATTGAA+CGG | + | chr2.4:57417163-57417182 | MS.gene67840:CDS | 25.0% |
! | CATATGATGCTAGATAAATT+GGG | - | chr2.4:57418168-57418187 | None:intergenic | 25.0% |
! | CTATGATGAAAAGTCAAATA+TGG | + | chr2.4:57417245-57417264 | MS.gene67840:CDS | 25.0% |
! | GAGTACAATATTAGAAACTA+GGG | + | chr2.4:57417650-57417669 | MS.gene67840:intron | 25.0% |
! | GAGTATACTTGTAACAAAAT+GGG | + | chr2.4:57417950-57417969 | MS.gene67840:intron | 25.0% |
! | TACAAAACTAAAGATTTGTC+TGG | + | chr2.4:57417387-57417406 | MS.gene67840:CDS | 25.0% |
! | TGAGTACAATATTAGAAACT+AGG | + | chr2.4:57417649-57417668 | MS.gene67840:intron | 25.0% |
! | TGAGTATACTTGTAACAAAA+TGG | + | chr2.4:57417949-57417968 | MS.gene67840:intron | 25.0% |
! | TGATGAAGATAATGAAAACA+TGG | - | chr2.4:57419482-57419501 | None:intergenic | 25.0% |
!!! | TAAGTGTTGAAACAATTGTA+AGG | - | chr2.4:57419377-57419396 | None:intergenic | 25.0% |
!!! | TTTCTATAAACTTGTTATGG+CGG | + | chr2.4:57417803-57417822 | MS.gene67840:intron | 25.0% |
!!! | TTTTTTGAGATGCTTCTTTT+TGG | - | chr2.4:57419305-57419324 | None:intergenic | 25.0% |
!!! | TTTTTTTTTTTTTAGGCCCA+TGG | + | chr2.4:57418942-57418961 | MS.gene67840:intron | 25.0% |
AACAAAAATTGAGACTCCTA+TGG | + | chr2.4:57416975-57416994 | MS.gene67840:CDS | 30.0% | |
AACACTTGGATTAACTGAAT+TGG | + | chr2.4:57419551-57419570 | MS.gene67840:CDS | 30.0% | |
ACAATTCAAAGGGACAAATT+AGG | + | chr2.4:57418136-57418155 | MS.gene67840:CDS | 30.0% | |
ATTCTACAAAGTCAAATTCC+TGG | + | chr2.4:57418319-57418338 | MS.gene67840:CDS | 30.0% | |
ATTTATCTAGCATCATATGG+TGG | + | chr2.4:57418169-57418188 | MS.gene67840:CDS | 30.0% | |
CAAATGTTGCACAATTCAAA+GGG | + | chr2.4:57418126-57418145 | MS.gene67840:CDS | 30.0% | |
CCAATTTATCTAGCATCATA+TGG | + | chr2.4:57418166-57418185 | MS.gene67840:CDS | 30.0% | |
CCATATGATGCTAGATAAAT+TGG | - | chr2.4:57418169-57418188 | None:intergenic | 30.0% | |
CGGAAGAAGAAAAATGAATA+AGG | - | chr2.4:57419722-57419741 | None:intergenic | 30.0% | |
CTAATTCTAATAGGCCTAAA+AGG | + | chr2.4:57418846-57418865 | MS.gene67840:intron | 30.0% | |
GGTCACAAACCTAAATATAA+AGG | + | chr2.4:57419018-57419037 | MS.gene67840:intron | 30.0% | |
GTAATAATTCAACACCTTCA+AGG | - | chr2.4:57418096-57418115 | None:intergenic | 30.0% | |
GTGTTATCATTCAAGTGATT+TGG | - | chr2.4:57417927-57417946 | None:intergenic | 30.0% | |
TAAACAGGTCAATTCTTACT+TGG | + | chr2.4:57418603-57418622 | MS.gene67840:intron | 30.0% | |
TACTAGAAAACAAACCAACT+TGG | + | chr2.4:57418011-57418030 | MS.gene67840:CDS | 30.0% | |
TGAACGGCATGATATAAAAA+TGG | + | chr2.4:57417179-57417198 | MS.gene67840:CDS | 30.0% | |
TGATGAAAAGTCAAATATGG+AGG | + | chr2.4:57417248-57417267 | MS.gene67840:CDS | 30.0% | |
TTTATCATCTTATCAAGTCC+AGG | - | chr2.4:57418340-57418359 | None:intergenic | 30.0% | |
! | ACTTTTCATCATAGTCTTCT+TGG | - | chr2.4:57417239-57417258 | None:intergenic | 30.0% |
! | CTTTTAGGCCTATTAGAATT+AGG | - | chr2.4:57418848-57418867 | None:intergenic | 30.0% |
! | GGTAACTTTTACTCTCAAAA+TGG | + | chr2.4:57419572-57419591 | MS.gene67840:CDS | 30.0% |
! | TGCTACTATCATACTCTTTT+GGG | + | chr2.4:57419527-57419546 | MS.gene67840:CDS | 30.0% |
! | TTATATTTAGGTTTGTGACC+AGG | - | chr2.4:57419018-57419037 | None:intergenic | 30.0% |
! | TTATCGAATTCGCAACATTT+TGG | - | chr2.4:57416880-57416899 | None:intergenic | 30.0% |
!! | ATTTGCTAGTAGCTTTTCAA+TGG | - | chr2.4:57417148-57417167 | None:intergenic | 30.0% |
!! | GAAGGTGTTGAATTATTACT+TGG | + | chr2.4:57418097-57418116 | MS.gene67840:CDS | 30.0% |
!! | TATAAGGTGTCGTATATATG+CGG | + | chr2.4:57418754-57418773 | MS.gene67840:intron | 30.0% |
!! | TGATAAATCATCTTTGAGAC+AGG | + | chr2.4:57418525-57418544 | MS.gene67840:CDS | 30.0% |
!!! | AGTTGGTTTGTTTTCTAGTA+TGG | - | chr2.4:57418011-57418030 | None:intergenic | 30.0% |
!!! | GGACTTGTTAAATTTTGTGA+AGG | + | chr2.4:57417269-57417288 | MS.gene67840:CDS | 30.0% |
!!! | TTTTCCTTGCTGTTGTAAAA+GGG | + | chr2.4:57417478-57417497 | MS.gene67840:CDS | 30.0% |
AATGTTTGCAGCATCTTACA+TGG | + | chr2.4:57419196-57419215 | MS.gene67840:intron | 35.0% | |
ACTAAGTAGTACACAGTTGT+AGG | - | chr2.4:57418418-57418437 | None:intergenic | 35.0% | |
ACTTATAATCACTGCTTCAG+TGG | + | chr2.4:57419392-57419411 | MS.gene67840:intron | 35.0% | |
AGAGAGAGTGAAACTTGATT+TGG | + | chr2.4:57418450-57418469 | MS.gene67840:CDS | 35.0% | |
AGATTTGTCTGGATACTCAT+TGG | + | chr2.4:57417398-57417417 | MS.gene67840:CDS | 35.0% | |
ATTCTTACTTGGTCACAAAC+AGG | + | chr2.4:57418614-57418633 | MS.gene67840:intron | 35.0% | |
CAAGAGGACCTAATTCTAAT+AGG | + | chr2.4:57418837-57418856 | MS.gene67840:intron | 35.0% | |
CGCCTGAAACCTTTATATTT+AGG | - | chr2.4:57419030-57419049 | None:intergenic | 35.0% | |
CTGTTATCAGTGAACTTACT+TGG | + | chr2.4:57419658-57419677 | MS.gene67840:CDS | 35.0% | |
CTTCACGTTGCATCAAAATA+TGG | + | chr2.4:57418274-57418293 | MS.gene67840:CDS | 35.0% | |
GAGTATGATAGTAGCACTAA+TGG | - | chr2.4:57419523-57419542 | None:intergenic | 35.0% | |
GCAAATGTTGCACAATTCAA+AGG | + | chr2.4:57418125-57418144 | MS.gene67840:CDS | 35.0% | |
GCTTAATGAAGCATATGAGT+TGG | + | chr2.4:57416912-57416931 | MS.gene67840:CDS | 35.0% | |
GGCATGATATAAAAATGGCA+TGG | + | chr2.4:57417184-57417203 | MS.gene67840:CDS | 35.0% | |
GGGGATTGAAAAAAATTGGA+GGG | + | chr2.4:57418896-57418915 | MS.gene67840:intron | 35.0% | |
TAAAACAAGGGGACAGAAAA+TGG | + | chr2.4:57418870-57418889 | MS.gene67840:intron | 35.0% | |
TATCAGTGAACTTACTTGGT+TGG | + | chr2.4:57419662-57419681 | MS.gene67840:CDS | 35.0% | |
TGAAAATGACTACCGTATAC+AGG | + | chr2.4:57418789-57418808 | MS.gene67840:intron | 35.0% | |
TGACAAAAGCAATATGAGCA+GGG | + | chr2.4:57417338-57417357 | MS.gene67840:CDS | 35.0% | |
TGGAGTTTCAACGAATTTGT+TGG | + | chr2.4:57416939-57416958 | MS.gene67840:CDS | 35.0% | |
TTCTTACTTGGTCACAAACA+GGG | + | chr2.4:57418615-57418634 | MS.gene67840:intron | 35.0% | |
! | TGTAGCACTGTATTTTCCAT+AGG | - | chr2.4:57416994-57417013 | None:intergenic | 35.0% |
! | TTCATTATCCTTGGCTTTCA+CGG | + | chr2.4:57419623-57419642 | MS.gene67840:CDS | 35.0% |
!! | ACGGTAGTCATTTTCATCTT+TGG | - | chr2.4:57418785-57418804 | None:intergenic | 35.0% |
!! | CCTTTAGAATGATCTCAAGA+GGG | + | chr2.4:57417693-57417712 | MS.gene67840:intron | 35.0% |
!! | CGGTAGTCATTTTCATCTTT+GGG | - | chr2.4:57418784-57418803 | None:intergenic | 35.0% |
!! | CTTTAGAATGATCTCAAGAG+GGG | + | chr2.4:57417694-57417713 | MS.gene67840:intron | 35.0% |
!! | GAAGCATATGAGTTGGTATA+TGG | + | chr2.4:57416919-57416938 | MS.gene67840:CDS | 35.0% |
!! | GTGCTACTATCATACTCTTT+TGG | + | chr2.4:57419526-57419545 | MS.gene67840:CDS | 35.0% |
!! | TTTCCTTGCTGTTGTAAAAG+GGG | + | chr2.4:57417479-57417498 | MS.gene67840:CDS | 35.0% |
!!! | CTTTTCCTTGCTGTTGTAAA+AGG | + | chr2.4:57417477-57417496 | MS.gene67840:CDS | 35.0% |
AAATGACTACCGTATACAGG+AGG | + | chr2.4:57418792-57418811 | MS.gene67840:intron | 40.0% | |
AACCAACTTGGATCCATTCA+AGG | + | chr2.4:57418023-57418042 | MS.gene67840:CDS | 40.0% | |
ACCAACTTGGATCCATTCAA+GGG | + | chr2.4:57418024-57418043 | MS.gene67840:CDS | 40.0% | |
ACTTCTTCACTACTTCCACA+CGG | - | chr2.4:57418195-57418214 | None:intergenic | 40.0% | |
AGGAGATACCCATTTGCATT+TGG | + | chr2.4:57418375-57418394 | MS.gene67840:CDS | 40.0% | |
AGGCAACACTATGTTACATG+AGG | + | chr2.4:57417305-57417324 | MS.gene67840:CDS | 40.0% | |
AGGCCTAAAAGGCTAAAACA+AGG | + | chr2.4:57418857-57418876 | MS.gene67840:intron | 40.0% | |
ATAGATGCTGCGTAATGAAG+AGG | - | chr2.4:57418067-57418086 | None:intergenic | 40.0% | |
CATGGAACATTGCATGACAT+AGG | - | chr2.4:57419464-57419483 | None:intergenic | 40.0% | |
CCCTCTTGAGATCATTCTAA+AGG | - | chr2.4:57417696-57417715 | None:intergenic | 40.0% | |
CGCTCTCATTTCATTATCCT+TGG | + | chr2.4:57419614-57419633 | MS.gene67840:CDS | 40.0% | |
CTACATATTGCAGCTTGGTA+TGG | + | chr2.4:57417009-57417028 | MS.gene67840:CDS | 40.0% | |
CTTCATTACGCAGCATCTAT+AGG | + | chr2.4:57418067-57418086 | MS.gene67840:CDS | 40.0% | |
GACCGTCAATCTATCCTTAA+GGG | - | chr2.4:57417905-57417924 | None:intergenic | 40.0% | |
GCATCTATAGGTTACCTTGA+AGG | + | chr2.4:57418079-57418098 | MS.gene67840:CDS | 40.0% | |
GCATTACATGTTGCTGCAAA+TGG | + | chr2.4:57417108-57417127 | MS.gene67840:CDS | 40.0% | |
GCCTAAAAGGCTAAAACAAG+GGG | + | chr2.4:57418859-57418878 | MS.gene67840:intron | 40.0% | |
GCTGCAAACATTGTCGAATT+AGG | - | chr2.4:57419188-57419207 | None:intergenic | 40.0% | |
GCTGGGGGATTGAAAAAAAT+TGG | + | chr2.4:57418892-57418911 | MS.gene67840:intron | 40.0% | |
GGCCTAAAAGGCTAAAACAA+GGG | + | chr2.4:57418858-57418877 | MS.gene67840:intron | 40.0% | |
GGGGGATTGAAAAAAATTGG+AGG | + | chr2.4:57418895-57418914 | MS.gene67840:intron | 40.0% | |
GGGTATTTATAGCCCTTCAT+GGG | + | chr2.4:57417714-57417733 | MS.gene67840:intron | 40.0% | |
GTGAAGGAGAAGAATGTTCA+AGG | + | chr2.4:57417285-57417304 | MS.gene67840:CDS | 40.0% | |
GTGACAAAAGCAATATGAGC+AGG | + | chr2.4:57417337-57417356 | MS.gene67840:CDS | 40.0% | |
GTTTCACTCTCTCTTTGCTT+TGG | - | chr2.4:57418444-57418463 | None:intergenic | 40.0% | |
TGCCCTTAAGGATAGATTGA+CGG | + | chr2.4:57417900-57417919 | MS.gene67840:intron | 40.0% | |
TGGATTGCACTTAAATCTGC+TGG | + | chr2.4:57419216-57419235 | MS.gene67840:intron | 40.0% | |
TTACATGTTGCTGCAAATGG+TGG | + | chr2.4:57417111-57417130 | MS.gene67840:CDS | 40.0% | |
TTGGTTGGCAAATGTGTTTC+TGG | + | chr2.4:57419677-57419696 | MS.gene67840:CDS | 40.0% | |
! | ATACTCTTTTGGGCAACACT+TGG | + | chr2.4:57419537-57419556 | MS.gene67840:CDS | 40.0% |
! | CGAATTCGCAACATTTTGGA+AGG | - | chr2.4:57416876-57416895 | None:intergenic | 40.0% |
! | GAATTAGGTCCTCTTGCTTT+TGG | - | chr2.4:57418833-57418852 | None:intergenic | 40.0% |
!! | AGAATGCTCTAGAGTGACTT+AGG | - | chr2.4:57417778-57417797 | None:intergenic | 40.0% |
!! | CAAGAGCTGTTTCGTTGTTT+TGG | - | chr2.4:57418480-57418499 | None:intergenic | 40.0% |
!! | GAATGCTCTAGAGTGACTTA+GGG | - | chr2.4:57417777-57417796 | None:intergenic | 40.0% |
!! | GAGAGTTCAGTTTCAAGTTC+AGG | - | chr2.4:57416838-57416857 | None:intergenic | 40.0% |
!! | GCCTTTAGAATGATCTCAAG+AGG | + | chr2.4:57417692-57417711 | MS.gene67840:intron | 40.0% |
!! | TCAGCTCTGAGAATGAAAAG+AGG | + | chr2.4:57418660-57418679 | MS.gene67840:intron | 40.0% |
!!! | TCCCCTTGTTTTAGCCTTTT+AGG | - | chr2.4:57418863-57418882 | None:intergenic | 40.0% |
!!! | TCTTGCTTTTGGTGTTAGGT+GGG | - | chr2.4:57418822-57418841 | None:intergenic | 40.0% |
ACCGAATTACAAGCCCATGA+AGG | - | chr2.4:57417730-57417749 | None:intergenic | 45.0% | |
ACTTAAGCCCCAAGCAACTT+GGG | + | chr2.4:57417751-57417770 | MS.gene67840:intron | 45.0% | |
ATCTCGCAGCCAAATGCAAA+TGG | - | chr2.4:57418387-57418406 | None:intergenic | 45.0% | |
ATGAGAGCGATTCCAAGAAG+CGG | - | chr2.4:57419603-57419622 | None:intergenic | 45.0% | |
ATTCAAGGGACAGACACGAA+AGG | + | chr2.4:57418038-57418057 | MS.gene67840:CDS | 45.0% | |
CACCTAACACCAAAAGCAAG+AGG | + | chr2.4:57418821-57418840 | MS.gene67840:intron | 45.0% | |
CAGTGCTACATATTGCAGCT+TGG | + | chr2.4:57417004-57417023 | MS.gene67840:CDS | 45.0% | |
CCCTTCATGGGCTTGTAATT+CGG | + | chr2.4:57417726-57417745 | MS.gene67840:intron | 45.0% | |
CCGAATTACAAGCCCATGAA+GGG | - | chr2.4:57417729-57417748 | None:intergenic | 45.0% | |
CTGATGCAGAAGCAGAATCA+CGG | + | chr2.4:57417585-57417604 | MS.gene67840:CDS | 45.0% | |
GGACCGTCAATCTATCCTTA+AGG | - | chr2.4:57417906-57417925 | None:intergenic | 45.0% | |
TCCCTTGAATGGATCCAAGT+TGG | - | chr2.4:57418028-57418047 | None:intergenic | 45.0% | |
TCTCGCAGCCAAATGCAAAT+GGG | - | chr2.4:57418386-57418405 | None:intergenic | 45.0% | |
TGCTGTTGTAAAAGGGGACA+AGG | + | chr2.4:57417485-57417504 | MS.gene67840:CDS | 45.0% | |
TTGCCCCCAAAATGTTAAGC+CGG | + | chr2.4:57417533-57417552 | MS.gene67840:CDS | 45.0% | |
TTTCGTGTCTGTCCCTTGAA+TGG | - | chr2.4:57418039-57418058 | None:intergenic | 45.0% | |
! | AAAATGGTCATGCCGCTTCT+TGG | + | chr2.4:57419588-57419607 | MS.gene67840:CDS | 45.0% |
! | ATCCCTCCGGCTTAACATTT+TGG | - | chr2.4:57417542-57417561 | None:intergenic | 45.0% |
! | GAAGTGTCAAGCATCTCTGT+GGG | - | chr2.4:57418238-57418257 | None:intergenic | 45.0% |
! | GGGGTATTTATAGCCCTTCA+TGG | + | chr2.4:57417713-57417732 | MS.gene67840:intron | 45.0% |
! | TCCCTCCGGCTTAACATTTT+GGG | - | chr2.4:57417541-57417560 | None:intergenic | 45.0% |
! | TGTCCCCTTTTACAACAGCA+AGG | - | chr2.4:57417485-57417504 | None:intergenic | 45.0% |
! | TTTAGGTTTGTGACCAGGCT+CGG | - | chr2.4:57419013-57419032 | None:intergenic | 45.0% |
!! | AGAAGTGTCAAGCATCTCTG+TGG | - | chr2.4:57418239-57418258 | None:intergenic | 45.0% |
!!! | CTCTTGCTTTTGGTGTTAGG+TGG | - | chr2.4:57418823-57418842 | None:intergenic | 45.0% |
!!! | CTTGCTTTTGGTGTTAGGTG+GGG | - | chr2.4:57418821-57418840 | None:intergenic | 45.0% |
!!! | GTCCTCTTGCTTTTGGTGTT+AGG | - | chr2.4:57418826-57418845 | None:intergenic | 45.0% |
!!! | TTGCTTTTGGTGTTAGGTGG+GGG | - | chr2.4:57418820-57418839 | None:intergenic | 45.0% |
!!! | TTTTTTAGGCCCATGGCTGA+GGG | + | chr2.4:57418949-57418968 | MS.gene67840:intron | 45.0% |
!!! | TTTTTTTAGGCCCATGGCTG+AGG | + | chr2.4:57418948-57418967 | MS.gene67840:intron | 45.0% |
!!! | TTTTTTAAAAGATAAATATA+AGG | + | chr2.4:57418738-57418757 | MS.gene67840:intron | 5.0% |
AAGGGGACAGAAAATGGCTG+GGG | + | chr2.4:57418876-57418895 | MS.gene67840:intron | 50.0% | |
ACAAGGGGACAGAAAATGGC+TGG | + | chr2.4:57418874-57418893 | MS.gene67840:intron | 50.0% | |
ACTTAGGGCCCAAGTTGCTT+GGG | - | chr2.4:57417762-57417781 | None:intergenic | 50.0% | |
AGCCTCCGAATTCTTAGGGA+CGG | - | chr2.4:57418641-57418660 | None:intergenic | 50.0% | |
AGCTGAGCCTCCGAATTCTT+AGG | - | chr2.4:57418646-57418665 | None:intergenic | 50.0% | |
ATCAGGATAGCTGCTCCAAC+AGG | - | chr2.4:57417570-57417589 | None:intergenic | 50.0% | |
CAAGGGGACAGAAAATGGCT+GGG | + | chr2.4:57418875-57418894 | MS.gene67840:intron | 50.0% | |
CCCCAAAATGTTAAGCCGGA+GGG | + | chr2.4:57417537-57417556 | MS.gene67840:CDS | 50.0% | |
CGTGATTCTGCTTCTGCATC+AGG | - | chr2.4:57417587-57417606 | None:intergenic | 50.0% | |
GACTTAAGCCCCAAGCAACT+TGG | + | chr2.4:57417750-57417769 | MS.gene67840:intron | 50.0% | |
GCAAACAGCTCAACAGAGCT+GGG | - | chr2.4:57418978-57418997 | None:intergenic | 50.0% | |
GCAGCATGTTTAGCTGTTCC+AGG | + | chr2.4:57419414-57419433 | MS.gene67840:CDS | 50.0% | |
GCTGAGCCTCCGAATTCTTA+GGG | - | chr2.4:57418645-57418664 | None:intergenic | 50.0% | |
TCAAGCATCTCTGTGGGATC+AGG | - | chr2.4:57418232-57418251 | None:intergenic | 50.0% | |
TGCAAACAGCTCAACAGAGC+TGG | - | chr2.4:57418979-57418998 | None:intergenic | 50.0% | |
TGGAGGGCAGTAGTACTAGT+GGG | + | chr2.4:57418912-57418931 | MS.gene67840:intron | 50.0% | |
TTGGAGGGCAGTAGTACTAG+TGG | + | chr2.4:57418911-57418930 | MS.gene67840:intron | 50.0% | |
! | CCCTCCGGCTTAACATTTTG+GGG | - | chr2.4:57417540-57417559 | None:intergenic | 50.0% |
! | CCTCCGGCTTAACATTTTGG+GGG | - | chr2.4:57417539-57417558 | None:intergenic | 50.0% |
! | GCTTTTCCTTCTGCTTCACC+TGG | - | chr2.4:57419435-57419454 | None:intergenic | 50.0% |
! | TTATCCTTGGCTTTCACGGC+TGG | + | chr2.4:57419627-57419646 | MS.gene67840:CDS | 50.0% |
AAGACCAGCCGTGAAAGCCA+AGG | - | chr2.4:57419634-57419653 | None:intergenic | 55.0% | |
AGCATCATATGGTGGCCGTG+TGG | + | chr2.4:57418177-57418196 | MS.gene67840:CDS | 55.0% | |
AGGGGACAGAAAATGGCTGG+GGG | + | chr2.4:57418877-57418896 | MS.gene67840:intron | 55.0% | |
CAGGGCCGTCCCTAAGAATT+CGG | + | chr2.4:57418633-57418652 | MS.gene67840:intron | 55.0% | |
CCAACAGGCGATAATCCCTC+CGG | - | chr2.4:57417555-57417574 | None:intergenic | 55.0% | |
CCCCCAAAATGTTAAGCCGG+AGG | + | chr2.4:57417536-57417555 | MS.gene67840:CDS | 55.0% | |
CTAGGGTCTCATGAGCCCTT+CGG | + | chr2.4:57417845-57417864 | MS.gene67840:intron | 55.0% | |
CTTAGGGCCCAAGTTGCTTG+GGG | - | chr2.4:57417761-57417780 | None:intergenic | 55.0% | |
GACTTAGGGCCCAAGTTGCT+TGG | - | chr2.4:57417763-57417782 | None:intergenic | 55.0% | |
GCTGTTCCAGGTGAAGCAGA+AGG | + | chr2.4:57419426-57419445 | MS.gene67840:CDS | 55.0% | |
GGCACATATGCCCTCCAGAA+GGG | - | chr2.4:57417884-57417903 | None:intergenic | 55.0% | |
GTGGGGGTTCCTCCTGTATA+CGG | - | chr2.4:57418804-57418823 | None:intergenic | 55.0% | |
TAGGGTCTCATGAGCCCTTC+GGG | + | chr2.4:57417846-57417865 | MS.gene67840:intron | 55.0% | |
TTGTTATGGCGGCGCCCTTA+GGG | + | chr2.4:57417814-57417833 | MS.gene67840:intron | 55.0% | |
! | GGAGGGCATATGTGCCCTTA+AGG | + | chr2.4:57417888-57417907 | MS.gene67840:intron | 55.0% |
AGGGTCTCATGAGCCCTTCG+GGG | + | chr2.4:57417847-57417866 | MS.gene67840:intron | 60.0% | |
CCGGAGGGATTATCGCCTGT+TGG | + | chr2.4:57417552-57417571 | MS.gene67840:CDS | 60.0% | |
CGAAGGGCTCATGAGACCCT+AGG | - | chr2.4:57417847-57417866 | None:intergenic | 60.0% | |
GAGCTGTTTGCACCCCCTCA+GGG | + | chr2.4:57418987-57419006 | MS.gene67840:intron | 60.0% | |
GGCCGTCCCTAAGAATTCGG+AGG | + | chr2.4:57418636-57418655 | MS.gene67840:intron | 60.0% | |
GGCGTCTAAGCCCTTCTGGA+GGG | + | chr2.4:57417871-57417890 | MS.gene67840:intron | 60.0% | |
GGGCACATATGCCCTCCAGA+AGG | - | chr2.4:57417885-57417904 | None:intergenic | 60.0% | |
TGAGCTGTTTGCACCCCCTC+AGG | + | chr2.4:57418986-57419005 | MS.gene67840:intron | 60.0% | |
TGTTATGGCGGCGCCCTTAG+GGG | + | chr2.4:57417815-57417834 | MS.gene67840:intron | 60.0% | |
TTTAGGCCCATGGCTGAGGG+AGG | + | chr2.4:57418952-57418971 | MS.gene67840:intron | 60.0% | |
! | CTTGTTATGGCGGCGCCCTT+AGG | + | chr2.4:57417813-57417832 | MS.gene67840:intron | 60.0% |
GGGCGTCTAAGCCCTTCTGG+AGG | + | chr2.4:57417870-57417889 | MS.gene67840:intron | 65.0% | |
GGGTCTCATGAGCCCTTCGG+GGG | + | chr2.4:57417848-57417867 | MS.gene67840:intron | 65.0% | |
GGTCTCATGAGCCCTTCGGG+GGG | + | chr2.4:57417849-57417868 | MS.gene67840:intron | 65.0% | |
GTCTCATGAGCCCTTCGGGG+GGG | + | chr2.4:57417850-57417869 | MS.gene67840:intron | 65.0% | |
GTTATGGCGGCGCCCTTAGG+GGG | + | chr2.4:57417816-57417835 | MS.gene67840:intron | 65.0% | |
ACCCTAGGCGCGTCCCCCTA+AGG | - | chr2.4:57417832-57417851 | None:intergenic | 70.0% | |
AGCTGGGCCTCCCTCAGCCA+TGG | - | chr2.4:57418962-57418981 | None:intergenic | 70.0% | |
CCCTAGGCGCGTCCCCCTAA+GGG | - | chr2.4:57417831-57417850 | None:intergenic | 70.0% | |
CCCTTAGGGGGACGCGCCTA+GGG | + | chr2.4:57417828-57417847 | MS.gene67840:intron | 70.0% | |
GCTGGGCCTCCCTCAGCCAT+GGG | - | chr2.4:57418961-57418980 | None:intergenic | 70.0% | |
GGCTTAGACGCCCCCCCGAA+GGG | - | chr2.4:57417863-57417882 | None:intergenic | 70.0% | |
GTGACCAGGCTCGGCCCTGA+GGG | - | chr2.4:57419004-57419023 | None:intergenic | 70.0% | |
TGACCAGGCTCGGCCCTGAG+GGG | - | chr2.4:57419003-57419022 | None:intergenic | 70.0% | |
TGTGACCAGGCTCGGCCCTG+AGG | - | chr2.4:57419005-57419024 | None:intergenic | 70.0% | |
!! | GGGGGGCGTCTAAGCCCTTC+TGG | + | chr2.4:57417867-57417886 | MS.gene67840:intron | 70.0% |
GACCAGGCTCGGCCCTGAGG+GGG | - | chr2.4:57419002-57419021 | None:intergenic | 75.0% | |
GCCCTTAGGGGGACGCGCCT+AGG | + | chr2.4:57417827-57417846 | MS.gene67840:intron | 75.0% | |
GGGCTTAGACGCCCCCCCGA+AGG | - | chr2.4:57417864-57417883 | None:intergenic | 75.0% | |
! | CACCCCCTCAGGGCCGAGCC+TGG | + | chr2.4:57418997-57419016 | MS.gene67840:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 57416811 | 57419749 | 57416811 | ID=MS.gene67840 |
chr2.4 | mRNA | 57416811 | 57419749 | 57416811 | ID=MS.gene67840.t1;Parent=MS.gene67840 |
chr2.4 | exon | 57416811 | 57417606 | 57416811 | ID=MS.gene67840.t1.exon1;Parent=MS.gene67840.t1 |
chr2.4 | CDS | 57416811 | 57417606 | 57416811 | ID=cds.MS.gene67840.t1;Parent=MS.gene67840.t1 |
chr2.4 | exon | 57417996 | 57418550 | 57417996 | ID=MS.gene67840.t1.exon2;Parent=MS.gene67840.t1 |
chr2.4 | CDS | 57417996 | 57418550 | 57417996 | ID=cds.MS.gene67840.t1;Parent=MS.gene67840.t1 |
chr2.4 | exon | 57419412 | 57419749 | 57419412 | ID=MS.gene67840.t1.exon3;Parent=MS.gene67840.t1 |
chr2.4 | CDS | 57419412 | 57419749 | 57419412 | ID=cds.MS.gene67840.t1;Parent=MS.gene67840.t1 |
Gene Sequence |
Protein sequence |