AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016742


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016742.t1 MTR_5g085480 67.179 716 198 9 28 722 2 701 0.0 885
MS.gene016742.t1 MTR_5g085830 59.066 728 239 12 4 713 21 707 0.0 788
MS.gene016742.t1 MTR_5g085810 57.279 735 227 13 27 711 36 733 0.0 743
MS.gene016742.t1 MTR_5g085480 65.946 555 155 7 188 722 1 541 0.0 669
MS.gene016742.t1 MTR_2g033050 80.101 397 75 3 75 468 1 396 0.0 651
MS.gene016742.t1 MTR_5g085500 51.600 500 126 12 300 718 1 465 1.24e-137 413
MS.gene016742.t1 MTR_5g085490 71.329 286 78 3 2 285 9 292 5.31e-137 405
MS.gene016742.t1 MTR_2g033045 78.995 219 24 2 499 717 28 224 2.61e-105 323
MS.gene016742.t1 MTR_5g085440 82.297 209 27 4 522 722 159 365 1.58e-103 321
MS.gene016742.t1 MTR_5g085440 81.818 154 28 0 2 155 3 156 5.65e-84 270
MS.gene016742.t1 MTR_5g085520 70.707 198 56 2 82 277 1 198 8.42e-87 272
MS.gene016742.t1 MTR_5g085530 78.082 73 15 1 279 350 1 73 7.43e-33 121
MS.gene016742.t1 MTR_2g096190 25.966 466 276 14 235 677 63 482 3.37e-23 104
MS.gene016742.t1 MTR_7g100390 26.622 447 275 10 235 663 46 457 1.91e-22 102
MS.gene016742.t1 MTR_4g062100 24.667 450 282 12 235 663 67 480 5.52e-22 100
MS.gene016742.t1 MTR_2g101310 22.676 441 278 12 277 665 145 574 9.16e-22 100
MS.gene016742.t1 MTR_7g117620 24.891 458 284 14 242 683 85 498 1.01e-20 97.1
MS.gene016742.t1 MTR_1g069110 24.609 447 267 12 286 696 30 442 7.43e-19 90.5
MS.gene016742.t1 MTR_1g032100 23.529 510 312 14 231 717 49 503 1.52e-18 90.1
MS.gene016742.t1 MTR_2g096760 33.529 170 101 5 274 434 15 181 6.79e-18 87.4
MS.gene016742.t1 MTR_2g101310 22.478 347 215 9 277 580 145 480 1.64e-15 80.5
MS.gene016742.t1 MTR_2g101320 21.831 426 280 10 277 656 145 563 7.63e-15 78.6
MS.gene016742.t1 MTR_8g105260 21.978 455 255 12 231 663 91 467 1.04e-13 74.7
MS.gene016742.t1 MTR_7g099580 29.101 189 122 6 242 420 12 198 2.37e-13 72.4
MS.gene016742.t1 MTR_3g016210 26.531 245 156 5 245 466 13 256 2.64e-13 73.2
MS.gene016742.t1 MTR_8g072510 27.500 240 153 6 245 468 13 247 2.81e-13 73.2
MS.gene016742.t1 MTR_7g100430 24.272 309 192 9 114 418 65 335 1.09e-12 71.6
MS.gene016742.t1 MTR_8g066670 25.912 274 183 7 220 477 1052 1321 5.02e-12 70.1
MS.gene016742.t1 MTR_8g467780 29.508 183 107 5 289 453 62 240 6.44e-11 65.9
MS.gene016742.t1 MTR_8g073260 27.049 244 159 6 242 470 11 250 6.51e-11 65.5
MS.gene016742.t1 MTR_5g085560 44.681 94 37 3 500 579 24 116 6.63e-11 60.8
MS.gene016742.t1 MTR_4g021880 26.601 203 132 6 241 434 73 267 9.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016742.t1 AT1G03670 28.855 655 310 19 84 706 73 603 1.84e-59 212
MS.gene016742.t1 AT4G03500 27.663 629 349 11 84 705 80 609 1.26e-58 210
MS.gene016742.t1 AT4G03500 27.663 629 349 11 84 705 80 609 1.26e-58 210
MS.gene016742.t1 AT4G03500 27.663 629 349 11 84 705 103 632 1.65e-58 210
MS.gene016742.t1 AT4G03490 26.833 682 358 23 84 722 37 620 4.31e-51 188
MS.gene016742.t1 AT4G03460 31.537 501 245 10 233 706 188 617 1.22e-47 179
MS.gene016742.t1 AT4G03460 31.537 501 245 10 233 706 156 585 1.32e-47 178
MS.gene016742.t1 AT4G03490 25.254 689 360 22 84 722 27 610 2.28e-38 151
MS.gene016742.t1 AT4G03450 26.521 641 350 19 87 713 75 608 1.99e-37 149
MS.gene016742.t1 AT4G03490 25.037 667 344 20 84 710 37 587 1.38e-36 147
MS.gene016742.t1 AT4G03450 26.949 590 324 17 87 662 75 571 9.65e-36 144
MS.gene016742.t1 AT4G03490 27.483 433 213 13 84 489 27 385 7.46e-31 129
MS.gene016742.t1 AT4G03490 21.599 588 374 18 160 710 2 539 4.44e-21 98.6
MS.gene016742.t1 AT4G03480 29.356 419 232 13 75 453 142 536 9.21e-31 129
MS.gene016742.t1 AT4G03490 27.483 433 213 13 84 489 17 375 1.06e-30 129
MS.gene016742.t1 AT4G03490 23.039 408 249 12 335 710 155 529 5.10e-21 98.6
MS.gene016742.t1 AT4G03480 29.756 410 245 14 75 453 142 539 1.30e-30 128
MS.gene016742.t1 AT4G03440 30.273 403 226 14 79 451 107 484 2.83e-29 124
MS.gene016742.t1 AT4G03440 30.273 403 226 14 79 451 107 484 2.83e-29 124
MS.gene016742.t1 AT4G03440 30.273 403 226 14 79 451 114 491 2.90e-29 124
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G05040 28.788 396 220 10 75 453 100 450 3.06e-28 120
MS.gene016742.t1 AT4G03470 28.272 382 225 10 75 453 111 446 1.91e-26 115
MS.gene016742.t1 AT4G14390 27.179 390 229 10 74 453 123 467 5.32e-26 114
MS.gene016742.t1 AT4G14390 27.179 390 229 10 74 453 104 448 5.58e-26 114
MS.gene016742.t1 AT4G14390 27.179 390 229 10 74 453 104 448 7.29e-26 112
MS.gene016742.t1 AT4G14390 27.110 391 229 10 74 453 123 468 1.72e-25 112
MS.gene016742.t1 AT5G02620 26.022 465 283 13 235 674 53 481 5.66e-23 103
MS.gene016742.t1 AT5G02620 26.022 465 283 13 235 674 53 481 5.66e-23 103
MS.gene016742.t1 AT5G02620 26.022 465 283 13 235 674 53 481 5.66e-23 103
MS.gene016742.t1 AT4G14400 27.436 390 227 14 80 453 91 440 7.55e-23 104
MS.gene016742.t1 AT4G14400 27.436 390 227 14 80 453 25 374 1.19e-22 103
MS.gene016742.t1 AT4G14400 27.436 390 227 14 80 453 25 374 1.19e-22 103
MS.gene016742.t1 AT5G60070 24.330 448 289 12 235 663 70 486 1.27e-21 99.8
MS.gene016742.t1 AT3G12360 22.376 505 320 12 234 721 125 574 3.42e-21 99.0
MS.gene016742.t1 AT3G12360 22.376 505 320 12 234 721 113 562 3.63e-21 98.6
MS.gene016742.t1 AT5G02620 25.336 446 299 10 235 658 53 486 6.89e-21 97.4
MS.gene016742.t1 AT5G02620 25.336 446 299 10 235 658 53 486 6.89e-21 97.4
MS.gene016742.t1 AT2G31820 24.837 459 281 13 242 678 193 609 2.98e-20 96.3
MS.gene016742.t1 AT5G50140 23.950 476 284 13 277 686 34 497 1.28e-19 93.6
MS.gene016742.t1 AT2G24600 24.131 518 316 16 177 670 63 527 1.19e-17 87.8
MS.gene016742.t1 AT2G24600 24.131 518 316 16 177 670 63 527 1.19e-17 87.8
MS.gene016742.t1 AT5G54710 22.168 618 374 17 84 656 19 574 1.18e-16 84.7
MS.gene016742.t1 AT3G09550 24.146 439 278 14 234 658 146 543 2.10e-16 83.6
MS.gene016742.t1 AT3G09550 24.382 283 178 8 115 394 93 342 7.17e-12 69.3
MS.gene016742.t1 AT3G09550 24.146 439 278 14 234 658 139 536 2.32e-16 83.6
MS.gene016742.t1 AT3G09550 24.296 284 179 8 114 394 85 335 7.68e-12 68.9
MS.gene016742.t1 AT3G09550 24.146 439 278 14 234 658 139 536 2.32e-16 83.6
MS.gene016742.t1 AT3G09550 24.296 284 179 8 114 394 85 335 7.68e-12 68.9
MS.gene016742.t1 AT1G05640 24.494 445 271 13 242 663 157 559 1.27e-15 81.3
MS.gene016742.t1 AT1G10340 23.353 501 307 18 177 657 63 506 1.64e-15 80.9
MS.gene016742.t1 AT2G01680 22.538 457 286 13 231 663 52 464 2.20e-15 80.1
MS.gene016742.t1 AT5G54710 22.065 494 313 12 177 656 94 529 3.18e-15 79.7
MS.gene016742.t1 AT1G34050 20.000 485 335 9 234 712 118 555 4.09e-15 79.3
MS.gene016742.t1 AT1G07710 25.169 445 285 12 235 663 63 475 6.14e-15 79.0
MS.gene016742.t1 AT1G07710 25.169 445 285 12 235 663 63 475 6.14e-15 79.0
MS.gene016742.t1 AT1G10340 23.353 501 303 19 177 657 63 502 3.25e-14 76.6
MS.gene016742.t1 AT2G24600 23.493 481 302 15 177 643 63 491 4.09e-14 76.3
MS.gene016742.t1 AT2G24600 23.493 481 302 15 177 643 63 491 4.09e-14 76.3
MS.gene016742.t1 AT5G51160 25.170 294 171 7 297 580 40 294 1.85e-13 73.6
MS.gene016742.t1 AT1G14500 24.605 443 260 16 245 656 8 407 6.98e-13 72.0
MS.gene016742.t1 AT2G28840 30.233 172 104 5 274 434 15 181 7.36e-13 72.0
MS.gene016742.t1 AT4G19150 36.220 127 74 3 308 434 20 139 7.67e-12 66.6

Find 118 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTATCTGATTCTGATTT+TGG 0.107559 5.2:-72824399 None:intergenic
TTGGTTGGCCAATGTGTTTC+TGG 0.131510 5.2:+72824863 MS.gene016742:CDS
GACTCTTCATCATACTCTTC+TGG 0.146198 5.2:-72821931 None:intergenic
AATTAATTTGATTGTCAAAT+TGG 0.185555 5.2:-72821585 None:intergenic
CGCTCTCATTTCATTATCTT+TGG 0.211926 5.2:+72824800 MS.gene016742:CDS
TTGGACAGCATGATATAAAA+AGG 0.215429 5.2:+72821875 MS.gene016742:CDS
TCCATTGAATGGATCCAATT+TGG 0.217296 5.2:-72822937 None:intergenic
CTTTACCTTGCGGTTGAAAA+TGG 0.224244 5.2:+72822171 MS.gene016742:CDS
TTCGGCTTAGCATCCTTCTT+AGG 0.225197 5.2:-72822231 None:intergenic
GGTTTGGATGCCACTCTTCT+TGG 0.229989 5.2:-72824288 None:intergenic
GTGCTACCATCATACTCTTT+TGG 0.232922 5.2:+72824712 MS.gene016742:CDS
GGCCAATGTGTTTCTGGTTA+TGG 0.260208 5.2:+72824869 MS.gene016742:CDS
ACAATTCAAAGGGACAAATT+AGG 0.261746 5.2:+72823048 MS.gene016742:CDS
ATTGTCAAATTGGCAACATT+TGG 0.262468 5.2:-72821575 None:intergenic
AAAATTGTTATGCCGCTTCT+TGG 0.265426 5.2:+72824774 MS.gene016742:CDS
CAAGAGCTGTTTCGTTGTTT+TGG 0.276243 5.2:-72823389 None:intergenic
TTAAATTTGAACAAAAGTTT+TGG 0.280811 5.2:-72821766 None:intergenic
TTAGCCAGTTATACTAATAT+TGG 0.290809 5.2:+72821856 MS.gene016742:CDS
CTGTCCAATATTAGTATAAC+TGG 0.292747 5.2:-72821860 None:intergenic
TACTAGAAAACAAGCCAAAT+TGG 0.300074 5.2:+72822923 MS.gene016742:CDS
CCATACGATGCTAGATGAAT+TGG 0.301352 5.2:-72823078 None:intergenic
CTTCACATTGCATCAAACTA+TGG 0.318717 5.2:+72823186 MS.gene016742:CDS
GGATCCCAACAAAGTGATTC+AGG 0.333650 5.2:+72824372 MS.gene016742:CDS
AGAAAGAGTGAAACTTGATT+TGG 0.333662 5.2:+72823362 MS.gene016742:CDS
GTATGATGAAGAGTCAAATA+TGG 0.336358 5.2:+72821939 MS.gene016742:CDS
ACTCTTCATCATACTCTTCT+GGG 0.351775 5.2:-72821930 None:intergenic
AACACTTGGATTAACTGAAT+TGG 0.355598 5.2:+72824737 MS.gene016742:CDS
TTTCATGTTTGTCCATTGAA+TGG 0.371890 5.2:-72822948 None:intergenic
GTTTCACTCTTTCTTTGCCT+TGG 0.372962 5.2:-72823353 None:intergenic
GAGTATGATGGTAGCACTAA+TGG 0.379466 5.2:-72824706 None:intergenic
TGGAGTTTCAACAAATTTGT+TGG 0.381612 5.2:+72821636 MS.gene016742:CDS
GCTATTCTCCAAGATTAGTT+TGG 0.384019 5.2:-72822208 None:intergenic
GAAGCATATCAATTGGTCTA+TGG 0.390920 5.2:+72821616 MS.gene016742:CDS
AGGTGACACTCCTTTGCATT+TGG 0.395086 5.2:+72823287 MS.gene016742:CDS
TGAATCTGAATCACTTGGTT+TGG 0.400624 5.2:-72824304 None:intergenic
TTGTCAAATTGGCAACATTT+GGG 0.406024 5.2:-72821574 None:intergenic
GAGGGTTCAATTTCAAGTTC+AGG 0.407035 5.2:-72821532 None:intergenic
GGATGCTGCCAAACTAATCT+TGG 0.418646 5.2:+72822200 MS.gene016742:CDS
GCTTAATGAAGCATATCAAT+TGG 0.419437 5.2:+72821609 MS.gene016742:CDS
TCGGCTTAGCATCCTTCTTA+GGG 0.421612 5.2:-72822230 None:intergenic
TACAAAACTGAAGATTTGTC+TGG 0.424015 5.2:+72822081 MS.gene016742:CDS
AATGTTTGCAGCATCTTACA+TGG 0.427993 5.2:+72824232 MS.gene016742:intron
GCAGCATGTTTAGCTGTTCC+AGG 0.429250 5.2:+72824600 MS.gene016742:CDS
ACTAAGTAGTACACAGTTGT+AGG 0.432418 5.2:-72823327 None:intergenic
TAAGTGTTGAAACAATTGTA+AGG 0.440585 5.2:-72824560 None:intergenic
TTCATGATTGCTGCTACAAC+AGG 0.442160 5.2:-72822264 None:intergenic
CTTCATTACGCAGCATCTAC+AGG 0.442175 5.2:+72822979 MS.gene016742:CDS
TCAAGCATCTCTGTGGGATC+AGG 0.447170 5.2:-72823141 None:intergenic
CAAGGATTAACACCTTGTTC+AGG 0.450221 5.2:-72825023 None:intergenic
AGATTTGTCTGGATACTCAT+TGG 0.451663 5.2:+72822092 MS.gene016742:CDS
TCCTTCCATCATCATCTACT+AGG 0.459843 5.2:+72824937 MS.gene016742:CDS
GAAGGTGTTGAATTATTACT+TGG 0.460344 5.2:+72823009 MS.gene016742:CDS
TGAACCTGAATCACTTTGTT+GGG 0.460731 5.2:-72824376 None:intergenic
GTGACAAGAGCAATATGAGC+AGG 0.467735 5.2:+72822031 MS.gene016742:CDS
CTGAACAAGGTGTTAATCCT+TGG 0.467856 5.2:+72825024 MS.gene016742:CDS
GTGAACCTGAATCACTTTGT+TGG 0.475536 5.2:-72824377 None:intergenic
AAGGAATGTTAGTAGTGAAA+AGG 0.480134 5.2:+72821507 MS.gene016742:CDS
GCATCTACAGGTTATCTTGA+AGG 0.481004 5.2:+72822991 MS.gene016742:CDS
GCCAAATTGGATCCATTCAA+TGG 0.490408 5.2:+72822936 MS.gene016742:CDS
ACTACTAACATTCCTTGATA+CGG 0.495639 5.2:-72821500 None:intergenic
CATACGATGCTAGATGAATT+GGG 0.501488 5.2:-72823077 None:intergenic
GCAAATGCTGCACAATTCAA+AGG 0.501880 5.2:+72823037 MS.gene016742:CDS
TGCAAGATGAAGCCGTATCA+AGG 0.505158 5.2:+72821488 MS.gene016742:CDS
AACAGAAATTGAGACTCCTA+TGG 0.509157 5.2:+72821672 MS.gene016742:CDS
ATCAAACTATGGAAAATATG+AGG 0.510180 5.2:+72823197 MS.gene016742:CDS
CTACATATTGCAGCTTGGTA+TGG 0.527273 5.2:+72821706 MS.gene016742:CDS
CTTGGAGAATAGCCCTAAGA+AGG 0.531650 5.2:+72822218 MS.gene016742:CDS
TTTGTTGGGATCCTTCAAGA+TGG 0.536052 5.2:-72824362 None:intergenic
GAATTTGTGACGGAGAAGAA+TGG 0.536444 5.2:+72821973 MS.gene016742:CDS
GATACGGCTTCATCTTGCAA+TGG 0.537281 5.2:-72821484 None:intergenic
TATCAGTGAACTCAGTTGGT+TGG 0.544404 5.2:+72824848 MS.gene016742:CDS
CAAATGCTGCACAATTCAAA+GGG 0.544446 5.2:+72823038 MS.gene016742:CDS
TGGACTGCACTTAAATCTGC+TGG 0.547758 5.2:+72824252 MS.gene016742:CDS
GCAATCATGAAGCAGAATCA+AGG 0.549271 5.2:+72822276 MS.gene016742:CDS
CAGTTATCAGTGAACTCAGT+TGG 0.550086 5.2:+72824844 MS.gene016742:CDS
CCAATTCATCTAGCATCGTA+TGG 0.551447 5.2:+72823078 MS.gene016742:CDS
ACAACAGGCGATAATCCCTT+CGG 0.560127 5.2:-72822249 None:intergenic
AATGACCTCAATGACTTCTG+AGG 0.562524 5.2:-72821551 None:intergenic
TTTGGTGAATCTGAATCACT+TGG 0.569155 5.2:-72824309 None:intergenic
GGCTTCCTAGTAGATGATGA+TGG 0.569426 5.2:-72824942 None:intergenic
TGTTGCCCAAAAGAGTATGA+TGG 0.588494 5.2:-72824718 None:intergenic
GTAGATGCTGCGTAATGAAG+AGG 0.589723 5.2:-72822976 None:intergenic
ATTCAATGGACAAACATGAA+AGG 0.591966 5.2:+72822950 MS.gene016742:CDS
GGACTTGTTAGAATTTGTGA+CGG 0.594343 5.2:+72821963 MS.gene016742:CDS
CGCCATAACCAGAAACACAT+TGG 0.594531 5.2:-72824871 None:intergenic
ATGACCTCAATGACTTCTGA+GGG 0.600511 5.2:-72821550 None:intergenic
GCTGTTCCAGGTGAAGCAGA+AGG 0.600903 5.2:+72824612 MS.gene016742:CDS
TCCTAGTAGATGATGATGGA+AGG 0.602445 5.2:-72824938 None:intergenic
TATAATATGCCTCATCCAGA+GGG 0.602495 5.2:+72821442 None:intergenic
TAAGAAGGATGCTAAGCCGA+AGG 0.603220 5.2:+72822233 MS.gene016742:CDS
TGATGAAGATAATGAAAGCA+TGG 0.607796 5.2:-72824665 None:intergenic
GAAATCAGTACTTTACCTTG+CGG 0.610836 5.2:+72822161 MS.gene016742:CDS
AAGAAGGATGCTAAGCCGAA+GGG 0.615867 5.2:+72822234 MS.gene016742:CDS
ATGAGAGCGATTCCAAGAAG+CGG 0.617860 5.2:-72824786 None:intergenic
TGAACCCTCAGAAGTCATTG+AGG 0.619198 5.2:+72821546 MS.gene016742:CDS
TGACAAGAGCAATATGAGCA+GGG 0.620460 5.2:+72822032 MS.gene016742:CDS
CATCACTTACACTAAGACCA+AGG 0.620872 5.2:-72825041 None:intergenic
GTGACGGAGAAGAATGGTCA+AGG 0.622304 5.2:+72821979 MS.gene016742:CDS
AGTAGTACACAGTTGTAGGA+TGG 0.631426 5.2:-72823323 None:intergenic
GATCTTGCAGCCAAATGCAA+AGG 0.631460 5.2:-72823297 None:intergenic
AGAAGTGTCAAGCATCTCTG+TGG 0.631679 5.2:-72823148 None:intergenic
TAATGAGAAATGTACCGCAA+TGG 0.638151 5.2:-72824963 None:intergenic
CAGTGCTACATATTGCAGCT+TGG 0.640810 5.2:+72821701 MS.gene016742:CDS
TGCGGTTGAAAATGGAGACA+AGG 0.642265 5.2:+72822179 MS.gene016742:CDS
GAAGTGTCAAGCATCTCTGT+GGG 0.645090 5.2:-72823147 None:intergenic
GCATTACATGTTGCTGCAAG+AGG 0.645771 5.2:+72821805 MS.gene016742:CDS
TTACATGTTGCTGCAAGAGG+TGG 0.650910 5.2:+72821808 MS.gene016742:CDS
AAACTATGGAAAATATGAGG+TGG 0.653988 5.2:+72823200 MS.gene016742:CDS
TTATAATATGCCTCATCCAG+AGG 0.656293 5.2:+72821441 None:intergenic
TGATGAAGAGTCAAATATGG+AGG 0.657104 5.2:+72821942 MS.gene016742:CDS
GTGTACTACTTAGTTAACCA+AGG 0.661765 5.2:+72823336 MS.gene016742:CDS
AAAGCAAAGTCCAAGAAGAG+TGG 0.661770 5.2:+72824278 MS.gene016742:CDS
ATTCATCTAGCATCGTATGG+TGG 0.672890 5.2:+72823081 MS.gene016742:CDS
AGGCAACACTATGTTACATG+AGG 0.678880 5.2:+72821999 MS.gene016742:CDS
ACTTCTTCACTACTTCCACA+TGG 0.680029 5.2:-72823104 None:intergenic
AGCATCGTATGGTGGCCATG+TGG 0.685642 5.2:+72823089 MS.gene016742:CDS
CATCTACTAGGAAGCCATTG+CGG 0.700888 5.2:+72824949 MS.gene016742:CDS
ACTGAAAGTAAACCTGAACA+AGG 0.702715 5.2:+72825011 MS.gene016742:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTTAAAAGAAACA+AGG + chr5.2:72824091-72824110 MS.gene016742:intron 10.0%
!!! AATTAATGATTTTATATTCT+TGG + chr5.2:72822631-72822650 MS.gene016742:intron 10.0%
!!! GATTAAAAAAGTTTAATTTT+AGG + chr5.2:72823595-72823614 MS.gene016742:intron 10.0%
!!! TTCTCTATTTTTTTTTTTTT+TGG - chr5.2:72822580-72822599 None:intergenic 10.0%
!!! TTGATTTTATTATCAATTAA+TGG + chr5.2:72822540-72822559 MS.gene016742:intron 10.0%
!! ATAAATCAAAAAGATAACAA+AGG + chr5.2:72823267-72823286 MS.gene016742:CDS 15.0%
!! ATATAAGTAGATTAAATGAA+TGG + chr5.2:72823527-72823546 MS.gene016742:intron 15.0%
!! TTAGAATACACTAAAAATAA+TGG + chr5.2:72821904-72821923 MS.gene016742:CDS 15.0%
!!! AATTAATTTGATTGTCAAAT+TGG - chr5.2:72821588-72821607 None:intergenic 15.0%
!!! AGTGTTTAATTTTAAATGAA+TGG + chr5.2:72823637-72823656 MS.gene016742:intron 15.0%
!!! TTAAATTTGAACAAAAGTTT+TGG - chr5.2:72821769-72821788 None:intergenic 15.0%
!!! TTTAAAATTAAACACTTTAG+AGG - chr5.2:72823633-72823652 None:intergenic 15.0%
!! AAAAATTTAACAAGCCAAAA+TGG + chr5.2:72822685-72822704 MS.gene016742:intron 20.0%
!! AAATTAGGATTACTCTTATA+TGG - chr5.2:72824172-72824191 None:intergenic 20.0%
!! AAGTTCAATATAAATCTCTT+AGG - chr5.2:72824145-72824164 None:intergenic 20.0%
!! ACAAAAAATAGATGCAAATT+AGG - chr5.2:72824187-72824206 None:intergenic 20.0%
!! ATTGATTAAAGAACTTAACT+AGG + chr5.2:72823730-72823749 MS.gene016742:intron 20.0%
!! TCTATACACTAGTAAATTTA+GGG - chr5.2:72823907-72823926 None:intergenic 20.0%
!! TGACAAAAATTAAAAGTCTA+TGG + chr5.2:72823977-72823996 MS.gene016742:intron 20.0%
!! TTGATTAAAGAACTTAACTA+GGG + chr5.2:72823731-72823750 MS.gene016742:intron 20.0%
!!! TCATTATCCTTATCTTTTTT+TGG + chr5.2:72824980-72824999 MS.gene016742:CDS 20.0%
! AGGGTTAGAATGATATAATA+TGG - chr5.2:72823888-72823907 None:intergenic 25.0%
! ATCAAACTATGGAAAATATG+AGG + chr5.2:72823197-72823216 MS.gene016742:CDS 25.0%
! CTCTATACACTAGTAAATTT+AGG - chr5.2:72823908-72823927 None:intergenic 25.0%
! TTAGAATGATATAATATGGC+AGG - chr5.2:72823884-72823903 None:intergenic 25.0%
! TTAGCCAGTTATACTAATAT+TGG + chr5.2:72821856-72821875 MS.gene016742:CDS 25.0%
!! CTAATAGCTTTTTAACAGTT+GGG - chr5.2:72821840-72821859 None:intergenic 25.0%
!! TCTTTATCTGATTCTGATTT+TGG - chr5.2:72824402-72824421 None:intergenic 25.0%
!! TGGTGATATATATTCCATTT+TGG - chr5.2:72822702-72822721 None:intergenic 25.0%
!!! GCTAATTGTTTTGTTGTTTT+TGG - chr5.2:72822794-72822813 None:intergenic 25.0%
!!! TAAGTGTTGAAACAATTGTA+AGG - chr5.2:72824563-72824582 None:intergenic 25.0%
!!! TTCATTATCTTTGGCTTTTA+TGG + chr5.2:72824809-72824828 MS.gene016742:CDS 25.0%
AAACTATGGAAAATATGAGG+TGG + chr5.2:72823200-72823219 MS.gene016742:CDS 30.0%
AACACTTGGATTAACTGAAT+TGG + chr5.2:72824737-72824756 MS.gene016742:CDS 30.0%
AAGGAATGTTAGTAGTGAAA+AGG + chr5.2:72821507-72821526 MS.gene016742:CDS 30.0%
ACAATTCAAAGGGACAAATT+AGG + chr5.2:72823048-72823067 MS.gene016742:CDS 30.0%
ACTACTAACATTCCTTGATA+CGG - chr5.2:72821503-72821522 None:intergenic 30.0%
AGAAAGAGTGAAACTTGATT+TGG + chr5.2:72823362-72823381 MS.gene016742:CDS 30.0%
AGAAGCCTAAGACAAATTTA+CGG - chr5.2:72822816-72822835 None:intergenic 30.0%
AGCATGATATAAAAAGGGAA+TGG + chr5.2:72821881-72821900 MS.gene016742:CDS 30.0%
AGTGAATGTGTTATAACCTT+TGG - chr5.2:72822436-72822455 None:intergenic 30.0%
ATTAGCCGTAAATTTGTCTT+AGG + chr5.2:72822808-72822827 MS.gene016742:intron 30.0%
ATTCAATGGACAAACATGAA+AGG + chr5.2:72822950-72822969 MS.gene016742:CDS 30.0%
ATTGTCAAATTGGCAACATT+TGG - chr5.2:72821578-72821597 None:intergenic 30.0%
CAAAAAGAAGACAATGTTGA+AGG + chr5.2:72824423-72824442 MS.gene016742:CDS 30.0%
CAAATTATCATTGTTAGGCA+GGG + chr5.2:72822368-72822387 MS.gene016742:intron 30.0%
CCATGCAAATTATCATTGTT+AGG + chr5.2:72822363-72822382 MS.gene016742:intron 30.0%
CTGTCCAATATTAGTATAAC+TGG - chr5.2:72821863-72821882 None:intergenic 30.0%
GCTTAATGAAGCATATCAAT+TGG + chr5.2:72821609-72821628 MS.gene016742:CDS 30.0%
GTATGATGAAGAGTCAAATA+TGG + chr5.2:72821939-72821958 MS.gene016742:CDS 30.0%
TACAAAACTGAAGATTTGTC+TGG + chr5.2:72822081-72822100 MS.gene016742:CDS 30.0%
TACTAGAAAACAAGCCAAAT+TGG + chr5.2:72822923-72822942 MS.gene016742:CDS 30.0%
TGATGAAGATAATGAAAGCA+TGG - chr5.2:72824668-72824687 None:intergenic 30.0%
TGGACAGCATGATATAAAAA+GGG + chr5.2:72821876-72821895 MS.gene016742:CDS 30.0%
TGGAGTTTCAACAAATTTGT+TGG + chr5.2:72821636-72821655 MS.gene016742:CDS 30.0%
TTGGACAGCATGATATAAAA+AGG + chr5.2:72821875-72821894 MS.gene016742:CDS 30.0%
TTGTCAAATTGGCAACATTT+GGG - chr5.2:72821577-72821596 None:intergenic 30.0%
TTTCATGTTTGTCCATTGAA+TGG - chr5.2:72822951-72822970 None:intergenic 30.0%
! CCTAACAATGATAATTTGCA+TGG - chr5.2:72822366-72822385 None:intergenic 30.0%
! CTTCAACATTGTCTTCTTTT+TGG - chr5.2:72824425-72824444 None:intergenic 30.0%
! GCAAAAAATAATTTTCCCTC+TGG - chr5.2:72821460-72821479 None:intergenic 30.0%
! GCTAATAGCTTTTTAACAGT+TGG - chr5.2:72821841-72821860 None:intergenic 30.0%
! TCTTCATCAGATACTGTTTT+TGG - chr5.2:72824330-72824349 None:intergenic 30.0%
!! CTTAACTAGGGTTTTATCAT+TGG + chr5.2:72823743-72823762 MS.gene016742:intron 30.0%
!! GAAGGTGTTGAATTATTACT+TGG + chr5.2:72823009-72823028 MS.gene016742:CDS 30.0%
!! TGATAAATCATCTTTGAGAC+AGG + chr5.2:72823437-72823456 MS.gene016742:intron 30.0%
AAAAACGAAGACCATCTTGA+AGG + chr5.2:72824351-72824370 MS.gene016742:CDS 35.0%
AACAGAAATTGAGACTCCTA+TGG + chr5.2:72821672-72821691 MS.gene016742:CDS 35.0%
AAGCAGTCACAAATAGCATA+AGG + chr5.2:72822727-72822746 MS.gene016742:intron 35.0%
AATGTTTGCAGCATCTTACA+TGG + chr5.2:72824232-72824251 MS.gene016742:intron 35.0%
ACTAAGTAGTACACAGTTGT+AGG - chr5.2:72823330-72823349 None:intergenic 35.0%
ACTCTTCATCATACTCTTCT+GGG - chr5.2:72821933-72821952 None:intergenic 35.0%
ACTGAAAGTAAACCTGAACA+AGG + chr5.2:72825011-72825030 MS.gene016742:CDS 35.0%
AGATTTGTCTGGATACTCAT+TGG + chr5.2:72822092-72822111 MS.gene016742:CDS 35.0%
CAAATGCTGCACAATTCAAA+GGG + chr5.2:72823038-72823057 MS.gene016742:CDS 35.0%
CACAAGTACCCTAATAGTAT+GGG - chr5.2:72822855-72822874 None:intergenic 35.0%
CAGAATCAAGGTATGTAAGT+TGG + chr5.2:72822288-72822307 MS.gene016742:intron 35.0%
CATACGATGCTAGATGAATT+GGG - chr5.2:72823080-72823099 None:intergenic 35.0%
CGCTCTCATTTCATTATCTT+TGG + chr5.2:72824800-72824819 MS.gene016742:CDS 35.0%
CGTGATGCCAAAAAAAGATA+AGG - chr5.2:72824990-72825009 None:intergenic 35.0%
CTTCACATTGCATCAAACTA+TGG + chr5.2:72823186-72823205 MS.gene016742:CDS 35.0%
CTTCCACGATCACAAAATTA+TGG + chr5.2:72824007-72824026 MS.gene016742:intron 35.0%
CTTTGTGCATGTAGTTTCTT+TGG - chr5.2:72822757-72822776 None:intergenic 35.0%
GAAATCAGTACTTTACCTTG+CGG + chr5.2:72822161-72822180 MS.gene016742:CDS 35.0%
GAATGTGTTATAACCTTTGG+AGG - chr5.2:72822433-72822452 None:intergenic 35.0%
GCAAATTATCATTGTTAGGC+AGG + chr5.2:72822367-72822386 MS.gene016742:intron 35.0%
GCATAAGACGATTGTATTGT+TGG - chr5.2:72822411-72822430 None:intergenic 35.0%
GTGTACTACTTAGTTAACCA+AGG + chr5.2:72823336-72823355 MS.gene016742:CDS 35.0%
TAATGAGAAATGTACCGCAA+TGG - chr5.2:72824966-72824985 None:intergenic 35.0%
TATTTGTGACTGCTTGTTTG+TGG - chr5.2:72822722-72822741 None:intergenic 35.0%
TCACAAGTACCCTAATAGTA+TGG - chr5.2:72822856-72822875 None:intergenic 35.0%
TCCATTGAATGGATCCAATT+TGG - chr5.2:72822940-72822959 None:intergenic 35.0%
TGAACCTGAATCACTTTGTT+GGG - chr5.2:72824379-72824398 None:intergenic 35.0%
TGAATCTGAATCACTTGGTT+TGG - chr5.2:72824307-72824326 None:intergenic 35.0%
TGATGAAGAGTCAAATATGG+AGG + chr5.2:72821942-72821961 MS.gene016742:CDS 35.0%
TTTGGTGAATCTGAATCACT+TGG - chr5.2:72824312-72824331 None:intergenic 35.0%
! AAAATTGTTATGCCGCTTCT+TGG + chr5.2:72824774-72824793 MS.gene016742:CDS 35.0%
! AATAATTTTCCCTCTGGATG+AGG - chr5.2:72821454-72821473 None:intergenic 35.0%
! GAAGCATATCAATTGGTCTA+TGG + chr5.2:72821616-72821635 MS.gene016742:CDS 35.0%
! GCTATTCTCCAAGATTAGTT+TGG - chr5.2:72822211-72822230 None:intergenic 35.0%
! TAGGGTACTTGTGACAAAAT+GGG + chr5.2:72822862-72822881 MS.gene016742:intron 35.0%
! TGACCATAATTTTGTGATCG+TGG - chr5.2:72824013-72824032 None:intergenic 35.0%
! TGCTACCATCATACTCTTTT+GGG + chr5.2:72824713-72824732 MS.gene016742:CDS 35.0%
! TTAGGGTACTTGTGACAAAA+TGG + chr5.2:72822861-72822880 MS.gene016742:intron 35.0%
!! GGACTTGTTAGAATTTGTGA+CGG + chr5.2:72821963-72821982 MS.gene016742:CDS 35.0%
!! GTTGTTACTCTGCTTTTGTT+CGG - chr5.2:72824496-72824515 None:intergenic 35.0%
!!! TTATCTTTGGCTTTTATGGC+TGG + chr5.2:72824813-72824832 MS.gene016742:CDS 35.0%
AAAGCAAAGTCCAAGAAGAG+TGG + chr5.2:72824278-72824297 MS.gene016742:CDS 40.0%
AATGACCTCAATGACTTCTG+AGG - chr5.2:72821554-72821573 None:intergenic 40.0%
ACTTCTTCACTACTTCCACA+TGG - chr5.2:72823107-72823126 None:intergenic 40.0%
AGGCAACACTATGTTACATG+AGG + chr5.2:72821999-72822018 MS.gene016742:CDS 40.0%
AGTAGTACACAGTTGTAGGA+TGG - chr5.2:72823326-72823345 None:intergenic 40.0%
ATGACCTCAATGACTTCTGA+GGG - chr5.2:72821553-72821572 None:intergenic 40.0%
ATTATCATTGTTAGGCAGGG+CGG + chr5.2:72822371-72822390 MS.gene016742:intron 40.0%
ATTCATCTAGCATCGTATGG+TGG + chr5.2:72823081-72823100 MS.gene016742:CDS 40.0%
CAAGGATTAACACCTTGTTC+AGG - chr5.2:72825026-72825045 None:intergenic 40.0%
CAGTTATCAGTGAACTCAGT+TGG + chr5.2:72824844-72824863 MS.gene016742:CDS 40.0%
CCAATTCATCTAGCATCGTA+TGG + chr5.2:72823078-72823097 MS.gene016742:CDS 40.0%
CCATACGATGCTAGATGAAT+TGG - chr5.2:72823081-72823100 None:intergenic 40.0%
CTACATATTGCAGCTTGGTA+TGG + chr5.2:72821706-72821725 MS.gene016742:CDS 40.0%
CTTTACCTTGCGGTTGAAAA+TGG + chr5.2:72822171-72822190 MS.gene016742:CDS 40.0%
GACTCTTCATCATACTCTTC+TGG - chr5.2:72821934-72821953 None:intergenic 40.0%
GAGTATGATGGTAGCACTAA+TGG - chr5.2:72824709-72824728 None:intergenic 40.0%
GCAAATGCTGCACAATTCAA+AGG + chr5.2:72823037-72823056 MS.gene016742:CDS 40.0%
GCAATCATGAAGCAGAATCA+AGG + chr5.2:72822276-72822295 MS.gene016742:CDS 40.0%
GCATCTACAGGTTATCTTGA+AGG + chr5.2:72822991-72823010 MS.gene016742:CDS 40.0%
GCCAAATTGGATCCATTCAA+TGG + chr5.2:72822936-72822955 MS.gene016742:CDS 40.0%
GTGAACCTGAATCACTTTGT+TGG - chr5.2:72824380-72824399 None:intergenic 40.0%
GTTTCACTCTTTCTTTGCCT+TGG - chr5.2:72823356-72823375 None:intergenic 40.0%
TATCAGTGAACTCAGTTGGT+TGG + chr5.2:72824848-72824867 MS.gene016742:CDS 40.0%
TCCTTCCATCATCATCTACT+AGG + chr5.2:72824937-72824956 MS.gene016742:CDS 40.0%
TGACAAGAGCAATATGAGCA+GGG + chr5.2:72822032-72822051 MS.gene016742:CDS 40.0%
TTCATGATTGCTGCTACAAC+AGG - chr5.2:72822267-72822286 None:intergenic 40.0%
TTTGTTGGGATCCTTCAAGA+TGG - chr5.2:72824365-72824384 None:intergenic 40.0%
! ATACTCTTTTGGGCAACACT+TGG + chr5.2:72824723-72824742 MS.gene016742:CDS 40.0%
! CTGAACAAGGTGTTAATCCT+TGG + chr5.2:72825024-72825043 MS.gene016742:CDS 40.0%
! GAATTTGTGACGGAGAAGAA+TGG + chr5.2:72821973-72821992 MS.gene016742:CDS 40.0%
! GAGCAGGGATATGATTTTCA+AGG + chr5.2:72822047-72822066 MS.gene016742:CDS 40.0%
! GTGCTACCATCATACTCTTT+TGG + chr5.2:72824712-72824731 MS.gene016742:CDS 40.0%
! TGTAGCACTGTGTTTTCCAT+AGG - chr5.2:72821691-72821710 None:intergenic 40.0%
! TGTGCTGACCCATACTATTA+GGG + chr5.2:72822844-72822863 MS.gene016742:intron 40.0%
! TGTTGCCCAAAAGAGTATGA+TGG - chr5.2:72824721-72824740 None:intergenic 40.0%
! TTGTGCTGACCCATACTATT+AGG + chr5.2:72822843-72822862 MS.gene016742:intron 40.0%
!! ACTCTGCTTTTGTTCGGTTT+TGG - chr5.2:72824490-72824509 None:intergenic 40.0%
!! CAAGAGCTGTTTCGTTGTTT+TGG - chr5.2:72823392-72823411 None:intergenic 40.0%
!! GAGGGTTCAATTTCAAGTTC+AGG - chr5.2:72821535-72821554 None:intergenic 40.0%
!! TCCTAGTAGATGATGATGGA+AGG - chr5.2:72824941-72824960 None:intergenic 40.0%
!!! GTATTGTTGGCCTTACCTTT+TGG - chr5.2:72822398-72822417 None:intergenic 40.0%
!!! TATGGCGCTGATTTTTGTTG+TGG + chr5.2:72824887-72824906 MS.gene016742:CDS 40.0%
AAGAAGGATGCTAAGCCGAA+GGG + chr5.2:72822234-72822253 MS.gene016742:CDS 45.0%
ACAACAGGCGATAATCCCTT+CGG - chr5.2:72822252-72822271 None:intergenic 45.0%
AGGTGACACTCCTTTGCATT+TGG + chr5.2:72823287-72823306 MS.gene016742:CDS 45.0%
ATGAGAGCGATTCCAAGAAG+CGG - chr5.2:72824789-72824808 None:intergenic 45.0%
CAATCGTCTTATGCCTCCAA+AGG + chr5.2:72822417-72822436 MS.gene016742:intron 45.0%
CAGTGCTACATATTGCAGCT+TGG + chr5.2:72821701-72821720 MS.gene016742:CDS 45.0%
CATCTACTAGGAAGCCATTG+CGG + chr5.2:72824949-72824968 MS.gene016742:CDS 45.0%
CGCCATAACCAGAAACACAT+TGG - chr5.2:72824874-72824893 None:intergenic 45.0%
CTTCATTACGCAGCATCTAC+AGG + chr5.2:72822979-72822998 MS.gene016742:CDS 45.0%
CTTGGAGAATAGCCCTAAGA+AGG + chr5.2:72822218-72822237 MS.gene016742:CDS 45.0%
GATACGGCTTCATCTTGCAA+TGG - chr5.2:72821487-72821506 None:intergenic 45.0%
GATCTTGCAGCCAAATGCAA+AGG - chr5.2:72823300-72823319 None:intergenic 45.0%
GCATTACATGTTGCTGCAAG+AGG + chr5.2:72821805-72821824 MS.gene016742:CDS 45.0%
GGATCCCAACAAAGTGATTC+AGG + chr5.2:72824372-72824391 MS.gene016742:CDS 45.0%
GGATGCTGCCAAACTAATCT+TGG + chr5.2:72822200-72822219 MS.gene016742:CDS 45.0%
GGCTTCCTAGTAGATGATGA+TGG - chr5.2:72824945-72824964 None:intergenic 45.0%
GTAGATGCTGCGTAATGAAG+AGG - chr5.2:72822979-72822998 None:intergenic 45.0%
GTGACAAGAGCAATATGAGC+AGG + chr5.2:72822031-72822050 MS.gene016742:CDS 45.0%
TAAGAAGGATGCTAAGCCGA+AGG + chr5.2:72822233-72822252 MS.gene016742:CDS 45.0%
TCGGCTTAGCATCCTTCTTA+GGG - chr5.2:72822233-72822252 None:intergenic 45.0%
TGAACCCTCAGAAGTCATTG+AGG + chr5.2:72821546-72821565 MS.gene016742:CDS 45.0%
TGCAAGATGAAGCCGTATCA+AGG + chr5.2:72821488-72821507 MS.gene016742:CDS 45.0%
TGCGGTTGAAAATGGAGACA+AGG + chr5.2:72822179-72822198 MS.gene016742:CDS 45.0%
TGGACTGCACTTAAATCTGC+TGG + chr5.2:72824252-72824271 MS.gene016742:CDS 45.0%
TTACATGTTGCTGCAAGAGG+TGG + chr5.2:72821808-72821827 MS.gene016742:CDS 45.0%
TTCGGCTTAGCATCCTTCTT+AGG - chr5.2:72822234-72822253 None:intergenic 45.0%
! GAAGTGTCAAGCATCTCTGT+GGG - chr5.2:72823150-72823169 None:intergenic 45.0%
! TGTCTCCATTTTCAACCGCA+AGG - chr5.2:72822179-72822198 None:intergenic 45.0%
! TTGGTTGGCCAATGTGTTTC+TGG + chr5.2:72824863-72824882 MS.gene016742:CDS 45.0%
!! AGAAGTGTCAAGCATCTCTG+TGG - chr5.2:72823151-72823170 None:intergenic 45.0%
!! GGCCAATGTGTTTCTGGTTA+TGG + chr5.2:72824869-72824888 MS.gene016742:CDS 45.0%
!!! ATTAAAAAAGTTTAATTTTA+GGG + chr5.2:72823596-72823615 MS.gene016742:intron 5.0%
GCAGCATGTTTAGCTGTTCC+AGG + chr5.2:72824600-72824619 MS.gene016742:CDS 50.0%
GGTTTGGATGCCACTCTTCT+TGG - chr5.2:72824291-72824310 None:intergenic 50.0%
TCAAGCATCTCTGTGGGATC+AGG - chr5.2:72823144-72823163 None:intergenic 50.0%
! GCTTTTCCTTCTGCTTCACC+TGG - chr5.2:72824621-72824640 None:intergenic 50.0%
! GTGACGGAGAAGAATGGTCA+AGG + chr5.2:72821979-72821998 MS.gene016742:CDS 50.0%
AGCATCGTATGGTGGCCATG+TGG + chr5.2:72823089-72823108 MS.gene016742:CDS 55.0%
GCTGTTCCAGGTGAAGCAGA+AGG + chr5.2:72824612-72824631 MS.gene016742:CDS 55.0%
GCAGGGCGGTCCAAAAGGTA+AGG + chr5.2:72822385-72822404 MS.gene016742:intron 60.0%
GTTAGGCAGGGCGGTCCAAA+AGG + chr5.2:72822380-72822399 MS.gene016742:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 72821448 72825052 72821448 ID=MS.gene016742
chr5.2 mRNA 72821448 72825052 72821448 ID=MS.gene016742.t1;Parent=MS.gene016742
chr5.2 exon 72821448 72822297 72821448 ID=MS.gene016742.t1.exon1;Parent=MS.gene016742.t1
chr5.2 CDS 72821448 72822297 72821448 ID=cds.MS.gene016742.t1;Parent=MS.gene016742.t1
chr5.2 exon 72822908 72823416 72822908 ID=MS.gene016742.t1.exon2;Parent=MS.gene016742.t1
chr5.2 CDS 72822908 72823416 72822908 ID=cds.MS.gene016742.t1;Parent=MS.gene016742.t1
chr5.2 exon 72824243 72825052 72824243 ID=MS.gene016742.t1.exon3;Parent=MS.gene016742.t1
chr5.2 CDS 72824243 72825052 72824243 ID=cds.MS.gene016742.t1;Parent=MS.gene016742.t1
Gene Sequence

>MS.gene016742

ATGCCTCATCCAGAGGGAAAATTATTTTTTGCTGAACCATTGCAAGATGAAGCCGTATCAAGGAATGTTAGTAGTGAAAAGGAGCCTGAACTTGAAATTGAACCCTCAGAAGTCATTGAGGTCATTCCCAAATGTTGCCAATTTGACAATCAAATTAATTTGCTTAATGAAGCATATCAATTGGTCTATGGAGTTTCAACAAATTTGTTGGATTTCTCTAATTTAACAGAAATTGAGACTCCTATGGAAAACACAGTGCTACATATTGCAGCTTGGTATGGTAATAATGACATTGTGAATCTTGTAATTCAACATGCTCCAAAACTTTTGTTCAAATTTAACAAAAATTATGATAGTGCATTACATGTTGCTGCAAGAGGTGGACACATCCCAACTGTTAAAAAGCTATTAGCCAGTTATACTAATATTGGACAGCATGATATAAAAAGGGAATGGTTAGAATACACTAAAAATAATGGTGACCCAGAAGAGTATGATGAAGAGTCAAATATGGAGGACTTGTTAGAATTTGTGACGGAGAAGAATGGTCAAGGCAACACTATGTTACATGAGGCAATGTTAAGTGACAAGAGCAATATGAGCAGGGATATGATTTTCAAGGTTTGTGAACTTTACAAAACTGAAGATTTGTCTGGATACTCATTGGCAAATTCTTGTTATAAATTTGCGTTAGATATTATTAATCATGCAAAGAAATCAGTACTTTACCTTGCGGTTGAAAATGGAGACAAGGATGCTGCCAAACTAATCTTGGAGAATAGCCCTAAGAAGGATGCTAAGCCGAAGGGATTATCGCCTGTTGTAGCAGCAATCATGAAGCAGAATCAAGGTATGTAAGTTGGTCATAATATTGTTGTTCAATCACTTGAATGATAACACTATGAGTAAATTATACCATGCAAATTATCATTGTTAGGCAGGGCGGTCCAAAAGGTAAGGCCAACAATACAATCGTCTTATGCCTCCAAAGGTTATAACACATTCACTTAATATTTTTATATCGTCTAATGTTATTAGTCTCATGTTCTACTATTTTCAAAATTAATATTGTCTAGATAAAGATTGAATTTCTTGATTTTATTATCAATTAATGGAGAAATATTCTTGACCAAAAAAAAAAAAAATAGAGAAATATTAAACAAAATTGATAGCATCATAATGTAATTAATGATTTTATATTCTTGGAAATTTTGAAAAACAAATTATTTCAAGAAAAAAAAATTTAACAAGCCAAAATGGAATATATATCACCACAAACAAGCAGTCACAAATAGCATAAGGTGTGCCAAAGAAACTACATGCACAAAGTCAGTCTGTCAAAGCCAAAAACAACAAAACAATTAGCCGTAAATTTGTCTTAGGCTTCTATATTTGTTGTGCTGACCCATACTATTAGGGTACTTGTGACAAAATGGGTAATATTTATGTTTGTGTGTCAGAACTGCTCAAGACAATACTAGAAAACAAGCCAAATTGGATCCATTCAATGGACAAACATGAAAGGCTTCCTCTTCATTACGCAGCATCTACAGGTTATCTTGAAGGTGTTGAATTATTACTTGGCAAATGCAAATGCTGCACAATTCAAAGGGACAAATTAGGTTATTTCCCAATTCATCTAGCATCGTATGGTGGCCATGTGGAAGTAGTGAAGAAGTTGTTAGAATATTGTCCTGATCCCACAGAGATGCTTGACACTTCTCATGAACGTAATATTCTTCACATTGCATCAAACTATGGAAAATATGAGGTGGTGCAATACATTCTACAAAGTCAAAGTAGTGAACATTATAAGATGATAAATCAAAAAGATAACAAAGGTGACACTCCTTTGCATTTGGCTGCAAGATCATGCCATCCTACAACTGTGTACTACTTAGTTAACCAAGGCAAAGAAAGAGTGAAACTTGATTTGGTTAACCAAAACAACGAAACAGCTCTTGACATTGTTAGTGCACTTTTTGAGCTTGATAAATCATCTTTGAGACAGGCAAGTAGTTCTATTCTCTCAGAAACTTGCAAATTTATAACTAAGTTTACTGTATAGTTTTTTCTTTTATATAAGTAGATTAAATGAATGGCTAAACATCAATTTATTAATAGTGTATGTATGAGAATACATTATTGATTAAAAAAGTTTAATTTTAGGGAGATGTTATGACCTCTAAAGTGTTTAATTTTAAATGAATGGCTAAACATCAATTTATTAATAGTGTATGCATGAGAATACATTATTAATAGTGTATGCATGAGAATACATTATTGATTAAAGAACTTAACTAGGGTTTTATCATTGGAATAAAAATCAGTTGAAGTTTTTAAATTTTATGTGACATCTTTGCTCGACATAAAACAAGTTAAGAACACAATAAAAATTTAATTCAAATTTGTTAGTGTCAAAACAGCAAATCACCTGCCATATTATATCATTCTAACCCTAAATTTACTAGTGTATAGAGAATGTTTGACATTTATAAATTTAAGAGAATAAAATTATAGATTTTTAAATGACAAAAATTAAAAGTCTATGGAGCAAGTCTTCCACGATCACAAAATTATGGTCACAACTCTAGAGCACACACACAAAATAACAAAATGTAAATTTTTTTTTTAATTATTTTTAAAAATATTTAAAAGAAACAAGGTAGCTAGAATAAATATTTTGTGAGTGTGCCTAAGAGATTTATATTGAACTTGTAACCATATAAGAGTAATCCTAATTTGCATCTATTTTTTGTTTCTTTTATGACACATAGCTTTAACAATGTTTGCAGCATCTTACATGGACTGCACTTAAATCTGCTGGTGCAAAGCAAAGTCCAAGAAGAGTGGCATCCAAACCAAGTGATTCAGATTCACCAAAAACAGTATCTGATGAAGACAAAAACGAAGACCATCTTGAAGGATCCCAACAAAGTGATTCAGGTTCACCAAAATCAGAATCAGATAAAGACCAAAAAGAAGACAATGTTGAAGGATCTCAACAAAGTGAAACAAAACAAAGAAATGAAAAGTCAACCAAAACCGAACAAAAGCAGAGTAACAACGAAAAAGAAAAAGTATCTGAAAGATATAAAGACAGAATAGAAAACCTTACAATTGTTTCAACACTTATAATCACTGCATCAGTAGCAGCATGTTTAGCTGTTCCAGGTGAAGCAGAAGGAAAAGCACACAACTTACGTCATGCAATGTTCCATGCTTTCATTATCTTCATCACAATATCATTGTTCAGTTCCATTAGTGCTACCATCATACTCTTTTGGGCAACACTTGGATTAACTGAATTGGTAACTTTTACTCTCAAAATTGTTATGCCGCTTCTTGGAATCGCTCTCATTTCATTATCTTTGGCTTTTATGGCTGGTCTCTACACAGTTATCAGTGAACTCAGTTGGTTGGCCAATGTGTTTCTGGTTATGGCGCTGATTTTTGTTGTGGTTGTGATTTTGTTATATATGCTTCTTTTCCTTCCATCATCATCTACTAGGAAGCCATTGCGGTACATTTCTCATTATCCTTATCTTTTTTTGGCATCACGAACTGAAAGTAAACCTGAACAAGGTGTTAATCCTTGGTCTTAG

Protein sequence

>MS.gene016742.t1

MPHPEGKLFFAEPLQDEAVSRNVSSEKEPELEIEPSEVIEVIPKCCQFDNQINLLNEAYQLVYGVSTNLLDFSNLTEIETPMENTVLHIAAWYGNNDIVNLVIQHAPKLLFKFNKNYDSALHVAARGGHIPTVKKLLASYTNIGQHDIKREWLEYTKNNGDPEEYDEESNMEDLLEFVTEKNGQGNTMLHEAMLSDKSNMSRDMIFKVCELYKTEDLSGYSLANSCYKFALDIINHAKKSVLYLAVENGDKDAAKLILENSPKKDAKPKGLSPVVAAIMKQNQELLKTILENKPNWIHSMDKHERLPLHYAASTGYLEGVELLLGKCKCCTIQRDKLGYFPIHLASYGGHVEVVKKLLEYCPDPTEMLDTSHERNILHIASNYGKYEVVQYILQSQSSEHYKMINQKDNKGDTPLHLAARSCHPTTVYYLVNQGKERVKLDLVNQNNETALDIHLTWTALKSAGAKQSPRRVASKPSDSDSPKTVSDEDKNEDHLEGSQQSDSGSPKSESDKDQKEDNVEGSQQSETKQRNEKSTKTEQKQSNNEKEKVSERYKDRIENLTIVSTLIITASVAACLAVPGEAEGKAHNLRHAMFHAFIIFITISLFSSISATIILFWATLGLTELVTFTLKIVMPLLGIALISLSLAFMAGLYTVISELSWLANVFLVMALIFVVVVILLYMLLFLPSSSTRKPLRYISHYPYLFLASRTESKPEQGVNPWS