AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81615

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81615.t1 MTR_5g085480 60.707 481 115 8 22 433 2 477 0.0 548
MS.gene81615.t1 MTR_2g033050 60.341 411 94 6 70 414 1 408 2.57e-157 452
MS.gene81615.t1 MTR_5g085830 50.304 493 166 10 4 434 29 504 1.46e-141 423
MS.gene81615.t1 MTR_5g085810 50.424 472 133 8 21 400 36 498 2.88e-140 420
MS.gene81615.t1 MTR_5g085480 60.502 319 81 5 158 433 1 317 2.50e-126 378
MS.gene81615.t1 MTR_5g085490 60.854 281 74 6 1 248 14 291 1.81e-103 311
MS.gene81615.t1 MTR_5g085500 72.727 165 44 1 248 412 16 179 3.27e-80 257
MS.gene81615.t1 MTR_5g085520 67.172 198 32 2 77 241 1 198 2.95e-79 245
MS.gene81615.t1 MTR_5g085440 64.626 147 40 4 1 138 1 144 1.40e-48 171
MS.gene81615.t1 MTR_2g096190 26.335 281 175 9 109 385 24 276 3.74e-13 72.0
MS.gene81615.t1 MTR_5g085530 81.081 37 6 1 248 283 37 73 3.80e-13 65.1
MS.gene81615.t1 MTR_1g032100 25.862 290 166 10 192 443 47 325 9.97e-12 67.4
MS.gene81615.t1 MTR_2g101310 23.970 267 156 6 247 475 182 439 4.24e-11 65.5
MS.gene81615.t1 MTR_2g101310 23.881 268 157 6 247 476 182 440 4.26e-11 65.9
MS.gene81615.t1 MTR_8g072510 28.205 195 121 6 206 389 46 232 5.51e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81615.t1 AT4G03460 30.189 371 193 12 61 386 63 412 1.99e-31 128
MS.gene81615.t1 AT4G03500 28.655 342 193 8 79 386 103 427 1.75e-28 119
MS.gene81615.t1 AT4G03460 29.945 364 188 13 69 386 38 380 1.87e-28 119
MS.gene81615.t1 AT4G03500 28.655 342 193 8 79 386 80 404 1.92e-28 119
MS.gene81615.t1 AT4G03500 28.655 342 193 8 79 386 80 404 1.92e-28 119
MS.gene81615.t1 AT1G03670 27.859 341 191 13 69 390 97 401 1.06e-24 107
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G05040 29.235 366 194 11 73 392 110 456 1.21e-23 104
MS.gene81615.t1 AT4G03440 28.099 363 184 13 74 363 114 472 2.31e-20 95.1
MS.gene81615.t1 AT4G03440 28.099 363 184 13 74 363 107 465 2.53e-20 94.7
MS.gene81615.t1 AT4G03440 28.099 363 184 13 74 363 107 465 2.53e-20 94.7
MS.gene81615.t1 AT4G03490 27.688 372 183 13 79 385 37 387 1.10e-19 92.8
MS.gene81615.t1 AT4G03490 27.660 376 186 13 75 385 33 387 1.77e-19 92.0
MS.gene81615.t1 AT4G03490 27.660 376 186 13 75 385 23 377 2.56e-19 91.3
MS.gene81615.t1 AT4G03450 28.070 342 204 10 82 389 75 408 2.97e-19 91.3
MS.gene81615.t1 AT4G03450 28.070 342 204 10 82 389 75 408 6.98e-19 90.1
MS.gene81615.t1 AT4G14390 26.648 349 178 11 69 363 104 428 9.04e-19 89.4
MS.gene81615.t1 AT4G03470 27.913 369 187 11 70 389 111 449 1.33e-18 89.4
MS.gene81615.t1 AT4G03480 26.949 449 231 17 27 386 96 536 2.42e-18 88.6
MS.gene81615.t1 AT4G14390 26.648 349 178 11 69 363 104 428 4.35e-18 87.8
MS.gene81615.t1 AT4G14390 26.648 349 178 11 69 363 123 447 4.79e-18 87.8
MS.gene81615.t1 AT4G14390 26.571 350 178 11 69 363 123 448 6.31e-18 87.4
MS.gene81615.t1 AT4G14400 27.297 381 192 15 70 392 93 446 1.58e-16 82.8
MS.gene81615.t1 AT4G14400 27.249 378 190 15 70 389 27 377 3.66e-16 81.6
MS.gene81615.t1 AT4G14400 27.249 378 190 15 70 389 27 377 3.66e-16 81.6
MS.gene81615.t1 AT4G03480 32.292 192 117 7 201 386 355 539 9.01e-14 74.3
MS.gene81615.t1 AT1G07710 28.315 279 172 9 109 385 24 276 8.06e-13 70.9
MS.gene81615.t1 AT1G07710 28.315 279 172 9 109 385 24 276 8.06e-13 70.9
MS.gene81615.t1 AT2G31820 26.885 305 191 10 109 409 148 424 1.40e-12 70.5
MS.gene81615.t1 AT5G60070 25.685 292 191 9 97 385 18 286 1.44e-12 70.1
MS.gene81615.t1 AT2G24600 25.085 295 182 7 79 366 38 300 2.58e-12 69.3
MS.gene81615.t1 AT2G24600 25.085 295 182 7 79 366 38 300 2.58e-12 69.3
MS.gene81615.t1 AT2G24600 25.085 295 182 7 79 366 38 300 3.59e-12 68.9
MS.gene81615.t1 AT2G24600 25.085 295 182 7 79 366 38 300 3.59e-12 68.9

Find 94 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTACCTTGCGGTTGAAAA+TGG 0.146468 5.1:-67551499 MS.gene81615:CDS
CCCCGGCTTCGCATCATTCT+TGG 0.163117 5.1:+67551438 None:intergenic
CCAATTCATCATGCATCTTT+TGG 0.182501 5.1:-67549193 MS.gene81615:CDS
TTATCAAATTTGCAACATTT+TGG 0.226185 5.1:+67552080 None:intergenic
CCCGGCTTCGCATCATTCTT+GGG 0.261344 5.1:+67551439 None:intergenic
GAGGCATATCACTTGGTATA+TGG 0.267603 5.1:-67552038 MS.gene81615:CDS
CCAAAAGATGCATGATGAAT+TGG 0.274437 5.1:+67549193 None:intergenic
CTTAATTTCTGTTAGATTAG+AGG 0.286999 5.1:+67551989 None:intergenic
GAGGCTTCAAATTCAAGTTT+AGG 0.328917 5.1:+67552122 None:intergenic
ACAATTCAAAGGGACAAATA+TGG 0.343812 5.1:-67549223 MS.gene81615:CDS
TTTACCTTGCGGTTGAAAAT+GGG 0.345762 5.1:-67551498 MS.gene81615:CDS
GAATGTTCCTAGTACTTATA+AGG 0.357184 5.1:-67552147 MS.gene81615:CDS
TGGAGACACCCCTTTGCATT+TGG 0.370450 5.1:-67548984 MS.gene81615:CDS
CCCAAGAATGATGCGAAGCC+GGG 0.376628 5.1:-67551439 MS.gene81615:CDS
AACGTTACAAAACTAAAGAT+TGG 0.382429 5.1:-67551594 MS.gene81615:CDS
TACAAAACTAAAGATTGGTT+CGG 0.384955 5.1:-67551589 MS.gene81615:CDS
CCATGTTCACAAAATGTAAC+AGG 0.386321 5.1:+67551686 None:intergenic
ATAAATCAGAAAGATAAGTA+TGG 0.387644 5.1:-67549004 MS.gene81615:CDS
CTATGATGAAGTGATGAATA+TGG 0.389772 5.1:-67551713 MS.gene81615:CDS
CTGCCCGTTGCTCACGGAAT+AGG 0.398301 5.1:+67547767 None:intergenic
CCCCAAGAATGATGCGAAGC+CGG 0.403669 5.1:-67551440 MS.gene81615:CDS
CAAAAGATGCATGATGAATT+GGG 0.412467 5.1:+67549194 None:intergenic
GGATGCAGTCAAACTAATCT+TGG 0.416238 5.1:-67551470 MS.gene81615:CDS
AGGCATATCACTTGGTATAT+GGG 0.427805 5.1:-67552037 MS.gene81615:CDS
CGTCCTATTCCGTGAGCAAC+GGG 0.437236 5.1:-67547770 MS.gene81615:CDS
GCTTCATCTTGTAATGTTTG+AGG 0.437579 5.1:+67552182 None:intergenic
CGCAACAATTCTCGCGGTCG+TGG 0.444205 5.1:-67547741 MS.gene81615:CDS
CTTCATGATAGCTGCTACAA+CGG 0.446936 5.1:+67551405 None:intergenic
TATAAATTTGTGAGTTAGTG+AGG 0.448397 5.1:+67548793 None:intergenic
GTACTAGGAACATTCCTTGT+TGG 0.453719 5.1:+67552155 None:intergenic
TCAAGCATCTCTGTGGGGTC+AGG 0.458482 5.1:+67549130 None:intergenic
TCATCTTTAGGTTACTTTGA+AGG 0.459928 5.1:-67549280 MS.gene81615:intron
GAAGGTGTTGAATTATTACT+TGG 0.460344 5.1:-67549262 MS.gene81615:CDS
AGGAACATTCCTTGTTGGTA+AGG 0.461724 5.1:+67552160 None:intergenic
ACAAAACTAAAGATTGGTTC+GGG 0.473325 5.1:-67551588 MS.gene81615:CDS
ATCTTGCAGCCAAATGCAAA+GGG 0.474929 5.1:+67548975 None:intergenic
GCGGTTCTGCCCGTTGCTCA+CGG 0.484120 5.1:+67547761 None:intergenic
CTTTCTGATTTATCATCTGA+CGG 0.487010 5.1:+67549014 None:intergenic
TTAGGTTCCTTATAAGTACT+AGG 0.487794 5.1:+67552140 None:intergenic
CTACACATTGCAGCTAGGTA+TGG 0.491524 5.1:-67551945 MS.gene81615:CDS
TCAAATTAATTTGCTTAGTG+AGG 0.503400 5.1:-67552057 MS.gene81615:CDS
GCAAATGCTGCACAATTCAA+AGG 0.506618 5.1:-67549234 MS.gene81615:CDS
TTCATGATAGCTGCTACAAC+GGG 0.508650 5.1:+67551406 None:intergenic
TTACATGTTGCTGCAAGAGC+CGG 0.510822 5.1:-67551843 MS.gene81615:CDS
ATAAATTTGTGAGTTAGTGA+GGG 0.511715 5.1:+67548794 None:intergenic
CCGTCCTATTCCGTGAGCAA+CGG 0.512475 5.1:-67547771 MS.gene81615:CDS
TGATAAATCATCTTTAAGAC+AGG 0.518883 5.1:-67548834 MS.gene81615:CDS
GTGTTAGCCACAAGTGCCGC+TGG 0.519556 5.1:+67547822 None:intergenic
TTACATGAGGCAATATTATG+TGG 0.521370 5.1:-67551640 MS.gene81615:CDS
CAAATGCTGCACAATTCAAA+GGG 0.522331 5.1:-67549233 MS.gene81615:CDS
TTCAACGGTTGAGATGTGTC+CGG 0.527933 5.1:+67551824 None:intergenic
CACGACCGCGAGAATTGTTG+CGG 0.533488 5.1:+67547742 None:intergenic
AGATTGGTTCGGGAACTCAT+TGG 0.533975 5.1:-67551578 MS.gene81615:CDS
ACTAAGTAGAACACAGTTGT+GGG 0.534295 5.1:+67548944 None:intergenic
GGCATATCACTTGGTATATG+GGG 0.542898 5.1:-67552036 MS.gene81615:CDS
GCTTAGTGAGGCATATCACT+TGG 0.543162 5.1:-67552045 MS.gene81615:CDS
CCGGCTTCGCATCATTCTTG+GGG 0.545853 5.1:+67551440 None:intergenic
GCTATCATGAAGCAGAATCA+AGG 0.549976 5.1:-67551394 MS.gene81615:intron
TTCAACACCAGCGGCACTTG+TGG 0.555669 5.1:-67547829 MS.gene81615:CDS
TTACCTTGCGGTTGAAAATG+GGG 0.557584 5.1:-67551497 MS.gene81615:CDS
CCAAGAATGATGCGAAGCCG+GGG 0.560239 5.1:-67551438 MS.gene81615:CDS
AAAGTGTCAAGCATCTCTGT+GGG 0.570596 5.1:+67549124 None:intergenic
GATCTTGCAGCCAAATGCAA+AGG 0.573294 5.1:+67548974 None:intergenic
TACATGAGGCAATATTATGT+GGG 0.574088 5.1:-67551639 MS.gene81615:CDS
AACTAAGTAGAACACAGTTG+TGG 0.574343 5.1:+67548943 None:intergenic
CTTCATATTGCAGCAAACCA+TGG 0.575934 5.1:-67549085 MS.gene81615:CDS
AAGTGCCGCTGGTGTTGAAG+AGG 0.582047 5.1:+67547833 None:intergenic
TCATCTTGTAATGTTTGAGG+AGG 0.587152 5.1:+67552185 None:intergenic
CAAGAATGATGCGAAGCCGG+GGG 0.595824 5.1:-67551437 MS.gene81615:CDS
CAGTGCTACACATTGCAGCT+AGG 0.598959 5.1:-67551950 MS.gene81615:CDS
TAAATTTGTGAGTTAGTGAG+GGG 0.604071 5.1:+67548795 None:intergenic
GAAATCAGTACTTTACCTTG+CGG 0.610836 5.1:-67551509 MS.gene81615:CDS
AAGGAACTCAGTTACTTCTG+AGG 0.610929 5.1:+67552103 None:intergenic
TTCTTCCTCTTCAACACCAG+CGG 0.612441 5.1:-67547838 MS.gene81615:CDS
AAAAGTGTCAAGCATCTCTG+TGG 0.615992 5.1:+67549123 None:intergenic
TGCGGTTGAAAATGGGGACA+AGG 0.619936 5.1:-67551491 MS.gene81615:CDS
AAGATGAAGCCTTACCAACA+AGG 0.622328 5.1:-67552169 MS.gene81615:CDS
GTGAACATGGAGAATGCTGA+AGG 0.624149 5.1:-67551673 MS.gene81615:CDS
GAATCATACAACAAATCTCG+TGG 0.624942 5.1:+67552011 None:intergenic
GACATCGGACAGTGGTGTGG+TGG 0.645415 5.1:+67547800 None:intergenic
ATAGGACGGAGGAGAGACAT+CGG 0.649818 5.1:+67547785 None:intergenic
CCGTTGCTCACGGAATAGGA+CGG 0.652913 5.1:+67547771 None:intergenic
AGAGACATCGGACAGTGGTG+TGG 0.656563 5.1:+67547797 None:intergenic
ACATGAGGCAATATTATGTG+GGG 0.665242 5.1:-67551638 MS.gene81615:CDS
GCATATCACTTGGTATATGG+GGG 0.669037 5.1:-67552035 MS.gene81615:CDS
AAGAATGATGCGAAGCCGGG+GGG 0.675721 5.1:-67551436 MS.gene81615:CDS
AGGAAACACTATGTTACATG+AGG 0.676313 5.1:-67551653 MS.gene81615:CDS
CAGAACCGCAACAATTCTCG+CGG 0.693557 5.1:-67547747 MS.gene81615:CDS
AACAACTGCAACAACAACAG+TGG 0.696236 5.1:-67547711 MS.gene81615:CDS
GGAGGAGAGACATCGGACAG+TGG 0.699442 5.1:+67547792 None:intergenic
TTGCTCACGGAATAGGACGG+AGG 0.736099 5.1:+67547774 None:intergenic
AAGTGTCAAGCATCTCTGTG+GGG 0.737296 5.1:+67549125 None:intergenic
TCTTGCAGCCAAATGCAAAG+GGG 0.746892 5.1:+67548976 None:intergenic
TGATGAAGTGATGAATATGG+AGG 0.759564 5.1:-67551710 MS.gene81615:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGATGAATAT+TGG + chr5.1:67548706-67548725 None:intergenic 10.0%
!! AAAGATAGAAAATAAATAAA+GGG + chr5.1:67548999-67549018 None:intergenic 10.0%
!! TGTATATATAAAAGAATAAT+AGG - chr5.1:67551307-67551326 MS.gene81615:intron 10.0%
!! TTTAATAATTCAAAGAAAAA+TGG + chr5.1:67548614-67548633 None:intergenic 10.0%
!!! TAAAAAGAGATTAATTTTTA+GGG + chr5.1:67549858-67549877 None:intergenic 10.0%
!!! TTTTCTTTGAATTATTAAAT+GGG - chr5.1:67548615-67548634 MS.gene81615:intron 10.0%
!!! TTTTTCTTTGAATTATTAAA+TGG - chr5.1:67548614-67548633 MS.gene81615:intron 10.0%
!! AAATAATGTCATAAAACTAT+TGG + chr5.1:67548646-67548665 None:intergenic 15.0%
!! ATATATAAAAGAATAATAGG+AGG - chr5.1:67551310-67551329 MS.gene81615:intron 15.0%
!! CAAAGATAGAAAATAAATAA+AGG + chr5.1:67549000-67549019 None:intergenic 15.0%
!! TATATAAAAGAATAATAGGA+GGG - chr5.1:67551311-67551330 MS.gene81615:intron 15.0%
!! TTAATTAGTAGAAATTTACA+AGG - chr5.1:67549069-67549088 MS.gene81615:CDS 15.0%
!!! CTAAAAAGAGATTAATTTTT+AGG + chr5.1:67549859-67549878 None:intergenic 15.0%
!!! TAAAAGATTGGTAATATTTT+AGG + chr5.1:67550076-67550095 None:intergenic 15.0%
!!! TAAAATATTACCAATCTTTT+AGG - chr5.1:67550075-67550094 MS.gene81615:intron 15.0%
!!! TATTTTGAAAACAAGTTATT+GGG + chr5.1:67550312-67550331 None:intergenic 15.0%
!!! TTTTATTATTCCTAAAAGAT+TGG + chr5.1:67550088-67550107 None:intergenic 15.0%
!!! TTTTTTATCGAAAACAATAA+TGG + chr5.1:67548899-67548918 None:intergenic 15.0%
!! ACATATCTCTACAAAAAATT+AGG - chr5.1:67551149-67551168 MS.gene81615:intron 20.0%
!! ATAAATCAGAAAGATAAGTA+TGG - chr5.1:67550891-67550910 MS.gene81615:intron 20.0%
!! GCAATTACTAATTACATTAT+TGG - chr5.1:67550485-67550504 MS.gene81615:intron 20.0%
!! GGAAATAGTAAAAAAATTGT+TGG - chr5.1:67550734-67550753 MS.gene81615:intron 20.0%
!!! ACTTTTAACTTTCTTAACTA+GGG - chr5.1:67548923-67548942 MS.gene81615:CDS 20.0%
!!! ATAAAGGGAAATGTTTTTTT+AGG + chr5.1:67548984-67549003 None:intergenic 20.0%
!!! ATGTTTTTTTAGGAGAATAA+AGG + chr5.1:67548974-67548993 None:intergenic 20.0%
!!! CTATTTTGAAAACAAGTTAT+TGG + chr5.1:67550313-67550332 None:intergenic 20.0%
!!! GTAATATTTTAGGAATCATT+TGG + chr5.1:67550066-67550085 None:intergenic 20.0%
!!! TACTTTTAACTTTCTTAACT+AGG - chr5.1:67548922-67548941 MS.gene81615:CDS 20.0%
!!! TGTTTTTTTAGGAGAATAAA+GGG + chr5.1:67548973-67548992 None:intergenic 20.0%
!!! TTAATCTCTTTTTAGTTTGA+CGG - chr5.1:67549864-67549883 MS.gene81615:intron 20.0%
!!! TTATCAAATTTGCAACATTT+TGG + chr5.1:67547818-67547837 None:intergenic 20.0%
! AACGTTACAAAACTAAAGAT+TGG - chr5.1:67548301-67548320 MS.gene81615:intron 25.0%
! AATAAGCTCATTTAATTAGC+AGG - chr5.1:67551245-67551264 MS.gene81615:intron 25.0%
! AATATATACTGAAGCAATAC+GGG - chr5.1:67549918-67549937 MS.gene81615:intron 25.0%
! ATAAATTTGTGAGTTAGTGA+GGG + chr5.1:67551104-67551123 None:intergenic 25.0%
! ATATAACAATATGTTTCCCT+TGG - chr5.1:67548578-67548597 MS.gene81615:intron 25.0%
! ATTAAATGAGTCACAAACAT+TGG - chr5.1:67551206-67551225 MS.gene81615:intron 25.0%
! CAATATTCATCTATTTAGCT+TGG - chr5.1:67548851-67548870 MS.gene81615:CDS 25.0%
! CATGTTATGCTAATATTGAA+CGG - chr5.1:67548104-67548123 MS.gene81615:intron 25.0%
! CTTAATTTCTGTTAGATTAG+AGG + chr5.1:67547909-67547928 None:intergenic 25.0%
! GAATATATACTGAAGCAATA+CGG - chr5.1:67549917-67549936 MS.gene81615:intron 25.0%
! GACTAATATTACAAAGAAGA+GGG + chr5.1:67550392-67550411 None:intergenic 25.0%
! GTCAAAACATTCTATATCTT+CGG + chr5.1:67550357-67550376 None:intergenic 25.0%
! GTCAGTAAGATAAGTAAATA+TGG - chr5.1:67550142-67550161 MS.gene81615:intron 25.0%
! TAAAAAGTAGGAACATCTTT+AGG - chr5.1:67550025-67550044 MS.gene81615:intron 25.0%
! TAAAACCTTAATTCATACTC+CGG + chr5.1:67550454-67550473 None:intergenic 25.0%
! TACTAAAAAACAAGCCAATT+TGG - chr5.1:67550547-67550566 MS.gene81615:intron 25.0%
! TATAAATTTGTGAGTTAGTG+AGG + chr5.1:67551105-67551124 None:intergenic 25.0%
! TGACTAATATTACAAAGAAG+AGG + chr5.1:67550393-67550412 None:intergenic 25.0%
! TGGTTTCCTTAAATAATACA+AGG - chr5.1:67550162-67550181 MS.gene81615:intron 25.0%
! TTTATCGAAAACAATAATGG+TGG + chr5.1:67548896-67548915 None:intergenic 25.0%
! TTTCTCAAAGTGAATAAGTA+GGG - chr5.1:67548755-67548774 MS.gene81615:intron 25.0%
!! AAATCATTTTCAATACCAAG+CGG + chr5.1:67551907-67551926 None:intergenic 25.0%
!! GAAATGTTAACTATTGACTA+GGG + chr5.1:67548951-67548970 None:intergenic 25.0%
!! TACAAAACTAAAGATTGGTT+CGG - chr5.1:67548306-67548325 MS.gene81615:intron 25.0%
!! TTGGTATTGAAAATGATTTC+TGG - chr5.1:67551908-67551927 MS.gene81615:CDS 25.0%
!!! AAAATGGTAATTTTTAGCCA+AGG + chr5.1:67548598-67548617 None:intergenic 25.0%
!!! AAATGGTAATTTTTAGCCAA+GGG + chr5.1:67548597-67548616 None:intergenic 25.0%
!!! AGATGACTTTTTCTTCAAAT+GGG + chr5.1:67551572-67551591 None:intergenic 25.0%
!!! ATTTTTTTACTATTTCCACG+TGG + chr5.1:67550731-67550750 None:intergenic 25.0%
!!! CTAGCAACATTTGTTATTTT+CGG + chr5.1:67550431-67550450 None:intergenic 25.0%
!!! GATGCACTTTTTCATTATTT+TGG + chr5.1:67550980-67550999 None:intergenic 25.0%
!!! GTATGAATTAAGGTTTTATG+AGG - chr5.1:67550456-67550475 MS.gene81615:intron 25.0%
!!! TAAAGATGTTCCTACTTTTT+AGG + chr5.1:67550026-67550045 None:intergenic 25.0%
!!! TCAAATTAATTTGCTTAGTG+AGG - chr5.1:67547838-67547857 MS.gene81615:CDS 25.0%
!!! TGATAAATCATCTTTAAGAC+AGG - chr5.1:67551061-67551080 MS.gene81615:intron 25.0%
AAAATCCTACACAAATTTCG+TGG + chr5.1:67549097-67549116 None:intergenic 30.0%
AAAGATGATGCGTAATGAAT+TGG + chr5.1:67550603-67550622 None:intergenic 30.0%
AAAGGAAAGTCCTAAAAAGT+AGG - chr5.1:67550013-67550032 MS.gene81615:intron 30.0%
AAATAACAAATGTTGCTAGC+CGG - chr5.1:67550432-67550451 MS.gene81615:intron 30.0%
AACTATCATTCTGGTGATAT+TGG - chr5.1:67551462-67551481 MS.gene81615:CDS 30.0%
ACAATTCAAAGGGACAAATA+TGG - chr5.1:67550672-67550691 MS.gene81615:intron 30.0%
ACATGCATTATTATATGCTG+GGG + chr5.1:67548802-67548821 None:intergenic 30.0%
AGACATGCATTATTATATGC+TGG + chr5.1:67548804-67548823 None:intergenic 30.0%
ATTCATTACGCATCATCTTT+AGG - chr5.1:67550603-67550622 MS.gene81615:intron 30.0%
ATTCCAACCTTTATCTATCT+TGG - chr5.1:67551491-67551510 MS.gene81615:CDS 30.0%
ATTTAAGGGACAAAGATGAA+AGG - chr5.1:67550574-67550593 MS.gene81615:intron 30.0%
CAAAAGATGCATGATGAATT+GGG + chr5.1:67550704-67550723 None:intergenic 30.0%
CAATGTCAAAACTATCATTC+TGG - chr5.1:67551453-67551472 MS.gene81615:CDS 30.0%
CTATGATGAAGTGATGAATA+TGG - chr5.1:67548182-67548201 MS.gene81615:intron 30.0%
CTCATGTATATGTATGATGT+TGG + chr5.1:67550252-67550271 None:intergenic 30.0%
CTTTCTCAAAGTGAATAAGT+AGG - chr5.1:67548754-67548773 MS.gene81615:intron 30.0%
CTTTCTGATTTATCATCTGA+CGG + chr5.1:67550884-67550903 None:intergenic 30.0%
GAATGTTCCTAGTACTTATA+AGG - chr5.1:67547748-67547767 MS.gene81615:CDS 30.0%
GACATGCATTATTATATGCT+GGG + chr5.1:67548803-67548822 None:intergenic 30.0%
GACATTGTTAATAGTGAAAG+TGG + chr5.1:67551440-67551459 None:intergenic 30.0%
GGTTAACCAGAAAAATGAAA+CGG - chr5.1:67551007-67551026 MS.gene81615:intron 30.0%
GGTTAGAATACACTAACAAT+TGG - chr5.1:67548146-67548165 MS.gene81615:intron 30.0%
GTATCAAGATGATACAAGAA+AGG - chr5.1:67549765-67549784 MS.gene81615:intron 30.0%
GTTATTGGGTATTTGAGTAT+TGG + chr5.1:67550298-67550317 None:intergenic 30.0%
TAAATTTGTGAGTTAGTGAG+GGG + chr5.1:67551103-67551122 None:intergenic 30.0%
TACATGAGGCAATATTATGT+GGG - chr5.1:67548256-67548275 MS.gene81615:intron 30.0%
TAGAATAAGAACTACACTAG+TGG + chr5.1:67549500-67549519 None:intergenic 30.0%
TATCATCTTGATACATGCTA+AGG + chr5.1:67549759-67549778 None:intergenic 30.0%
TGAACGGCATGATATAAAAA+TGG - chr5.1:67548120-67548139 MS.gene81615:intron 30.0%
TGTTAATAGTGAAAGTGGAA+TGG + chr5.1:67551435-67551454 None:intergenic 30.0%
TGTTTGTGTTATGGTTTGAT+AGG + chr5.1:67549647-67549666 None:intergenic 30.0%
TTACATGAGGCAATATTATG+TGG - chr5.1:67548255-67548274 MS.gene81615:intron 30.0%
TTAGGTTCCTTATAAGTACT+AGG + chr5.1:67547758-67547777 None:intergenic 30.0%
TTCACTGTTTGTTTGTGTTA+TGG + chr5.1:67549656-67549675 None:intergenic 30.0%
TTTCATCTTTGTCCCTTAAA+TGG + chr5.1:67550575-67550594 None:intergenic 30.0%
! AATCATTTTCAATACCAAGC+GGG + chr5.1:67551906-67551925 None:intergenic 30.0%
! ACAAAACTAAAGATTGGTTC+GGG - chr5.1:67548307-67548326 MS.gene81615:intron 30.0%
! AGTGTCATCAACATGATTTT+TGG + chr5.1:67551368-67551387 None:intergenic 30.0%
! CAAATTTGCAACATTTTGGA+AGG + chr5.1:67547814-67547833 None:intergenic 30.0%
! CTACTTATTCACTTTGAGAA+AGG + chr5.1:67548756-67548775 None:intergenic 30.0%
! GGAAATGTTAACTATTGACT+AGG + chr5.1:67548952-67548971 None:intergenic 30.0%
! TCATCTTTAGGTTACTTTGA+AGG - chr5.1:67550615-67550634 MS.gene81615:intron 30.0%
! TGAAAAAGTGCATCTTGATA+TGG - chr5.1:67550986-67551005 MS.gene81615:intron 30.0%
! TTCCTAGGTTGAAATCAATA+CGG + chr5.1:67549569-67549588 None:intergenic 30.0%
!! ATGACTTTTTCTTCAAATGG+GGG + chr5.1:67551570-67551589 None:intergenic 30.0%
!! CAGATGACTTTTTCTTCAAA+TGG + chr5.1:67551573-67551592 None:intergenic 30.0%
!! GAAGGTGTTGAATTATTACT+TGG - chr5.1:67550633-67550652 MS.gene81615:intron 30.0%
!! GATGACTTTTTCTTCAAATG+GGG + chr5.1:67551571-67551590 None:intergenic 30.0%
!! TTTTGAGAGCTAATTTGTGT+AGG - chr5.1:67549118-67549137 MS.gene81615:CDS 30.0%
!!! CTTTTTAGGACTTTCCTTTT+TGG + chr5.1:67550012-67550031 None:intergenic 30.0%
AAAGGTGAATTCTAGTCACT+AGG + chr5.1:67548738-67548757 None:intergenic 35.0%
AACTAAGTAGAACACAGTTG+TGG + chr5.1:67550955-67550974 None:intergenic 35.0%
AATAGGAGGGAGATGTTAAT+AGG - chr5.1:67551324-67551343 MS.gene81615:intron 35.0%
ACATATGAAAGCTACTATGC+TGG + chr5.1:67549156-67549175 None:intergenic 35.0%
ACATGAGGCAATATTATGTG+GGG - chr5.1:67548257-67548276 MS.gene81615:intron 35.0%
ACTAAGTAGAACACAGTTGT+GGG + chr5.1:67550954-67550973 None:intergenic 35.0%
AGACCAAGATAGATAAAGGT+TGG + chr5.1:67551497-67551516 None:intergenic 35.0%
AGCAATACGGGTCAAATAAA+CGG - chr5.1:67549930-67549949 MS.gene81615:intron 35.0%
AGCAGAAAACAGATAGATCA+AGG - chr5.1:67549240-67549259 MS.gene81615:CDS 35.0%
AGCAGGTGATTATTAAGACA+TGG - chr5.1:67551262-67551281 MS.gene81615:intron 35.0%
AGCCAATTTGGATCCATTTA+AGG - chr5.1:67550559-67550578 MS.gene81615:intron 35.0%
AGGAAACACTATGTTACATG+AGG - chr5.1:67548242-67548261 MS.gene81615:intron 35.0%
AGGCATATCACTTGGTATAT+GGG - chr5.1:67547858-67547877 MS.gene81615:CDS 35.0%
AGGTGATTATTAAGACATGG+TGG - chr5.1:67551265-67551284 MS.gene81615:intron 35.0%
AGGTTGAAATCAATACGGAT+AGG + chr5.1:67549564-67549583 None:intergenic 35.0%
ATCACTTCATCATAGTCTTC+TGG + chr5.1:67548177-67548196 None:intergenic 35.0%
ATGATACTACCAAAGCATGT+TGG - chr5.1:67551712-67551731 MS.gene81615:CDS 35.0%
ATTATTATATGCTGGGGTCA+GGG + chr5.1:67548796-67548815 None:intergenic 35.0%
CAAATGCTGCACAATTCAAA+GGG - chr5.1:67550662-67550681 MS.gene81615:intron 35.0%
CAATGACAACAAACACTCAA+GGG - chr5.1:67551755-67551774 MS.gene81615:intron 35.0%
CACGATGTTGCAACATTAAA+CGG + chr5.1:67549355-67549374 None:intergenic 35.0%
CAGTAGCAAAGGTTAGTAAA+GGG + chr5.1:67551982-67552001 None:intergenic 35.0%
CCAAAAGATGCATGATGAAT+TGG + chr5.1:67550705-67550724 None:intergenic 35.0%
CCATGTTCACAAAATGTAAC+AGG + chr5.1:67548212-67548231 None:intergenic 35.0%
GAAATCAGTACTTTACCTTG+CGG - chr5.1:67548386-67548405 MS.gene81615:intron 35.0%
GAATCATACAACAAATCTCG+TGG + chr5.1:67547887-67547906 None:intergenic 35.0%
GACGGCTTGAATGAATAATT+AGG - chr5.1:67549882-67549901 MS.gene81615:intron 35.0%
GCCAATTTGGATCCATTTAA+GGG - chr5.1:67550560-67550579 MS.gene81615:intron 35.0%
GCTTCATCTTGTAATGTTTG+AGG + chr5.1:67547716-67547735 None:intergenic 35.0%
GGCATGATATAAAAATGGCT+TGG - chr5.1:67548125-67548144 MS.gene81615:intron 35.0%
GTTGATCAAAGAGAAGTTTG+AGG + chr5.1:67551853-67551872 None:intergenic 35.0%
TCAATGACAACAAACACTCA+AGG - chr5.1:67551754-67551773 MS.gene81615:intron 35.0%
TCACTTCATCATAGTCTTCT+GGG + chr5.1:67548176-67548195 None:intergenic 35.0%
TCATCTTGTAATGTTTGAGG+AGG + chr5.1:67547713-67547732 None:intergenic 35.0%
TCCCTTAAATGGATCCAAAT+TGG + chr5.1:67550564-67550583 None:intergenic 35.0%
TGACCATAAGATAGTGAGAT+GGG + chr5.1:67549608-67549627 None:intergenic 35.0%
TGATGAAGTGATGAATATGG+AGG - chr5.1:67548185-67548204 MS.gene81615:intron 35.0%
TTATGGTTTGATAGGTCACA+GGG + chr5.1:67549639-67549658 None:intergenic 35.0%
TTTACCTTGCGGTTGAAAAT+GGG - chr5.1:67548397-67548416 MS.gene81615:intron 35.0%
! AAGTGAATAAGTAGGGTGTT+CGG - chr5.1:67548762-67548781 MS.gene81615:intron 35.0%
! ACATGCTAACAGCTTTTCAA+CGG + chr5.1:67548089-67548108 None:intergenic 35.0%
! ATTCATCATGCATCTTTTGG+TGG - chr5.1:67550705-67550724 MS.gene81615:intron 35.0%
! CCAATTCATCATGCATCTTT+TGG - chr5.1:67550702-67550721 MS.gene81615:intron 35.0%
! CCTGTTACATTTTGTGAACA+TGG - chr5.1:67548209-67548228 MS.gene81615:intron 35.0%
! GAGGCTTCAAATTCAAGTTT+AGG + chr5.1:67547776-67547795 None:intergenic 35.0%
! GTAGCACTGTGTTTTTCATA+GGG + chr5.1:67547934-67547953 None:intergenic 35.0%
! GTATCACATCATGTTTTCCA+TGG + chr5.1:67550830-67550849 None:intergenic 35.0%
! TAGCACTGTGTTTTTCATAG+GGG + chr5.1:67547933-67547952 None:intergenic 35.0%
! TGATTCTTCAAGCTCTAATC+TGG + chr5.1:67552011-67552030 None:intergenic 35.0%
! TGTAGCACTGTGTTTTTCAT+AGG + chr5.1:67547935-67547954 None:intergenic 35.0%
! TTCAAGCTCTAATCTGGATT+TGG + chr5.1:67552005-67552024 None:intergenic 35.0%
!! ATCCGTATTGATTTCAACCT+AGG - chr5.1:67549564-67549583 MS.gene81615:intron 35.0%
!! GTCATCAACATGATTTTTGG+AGG + chr5.1:67551365-67551384 None:intergenic 35.0%
!! GTGTTAGGTAGTTTGTTTGA+AGG + chr5.1:67549683-67549702 None:intergenic 35.0%
!! GTGTTTGTTGTCATTGAACA+TGG + chr5.1:67551751-67551770 None:intergenic 35.0%
!!! ATCTTGGTCTGCACTTTTTT+TGG - chr5.1:67551507-67551526 MS.gene81615:CDS 35.0%
AACAACTGCAACAACAACAG+TGG - chr5.1:67552184-67552203 MS.gene81615:CDS 40.0%
AACCAACCAATCTACTCCAA+CGG - chr5.1:67551396-67551415 MS.gene81615:CDS 40.0%
AAGATGAAGCCTTACCAACA+AGG - chr5.1:67547726-67547745 MS.gene81615:CDS 40.0%
AAGGAACTCAGTTACTTCTG+AGG + chr5.1:67547795-67547814 None:intergenic 40.0%
AATCAATACGGATAGGTCCT+AGG + chr5.1:67549557-67549576 None:intergenic 40.0%
AATGCGATTCCAACATGCTT+TGG + chr5.1:67551724-67551743 None:intergenic 40.0%
AATGTATGCAACCGTCATAC+AGG - chr5.1:67551662-67551681 MS.gene81615:CDS 40.0%
ACATATGCTTTCTGTGCATC+TGG + chr5.1:67549331-67549350 None:intergenic 40.0%
ACGGGTCAAATAAACGGTTT+GGG - chr5.1:67549936-67549955 MS.gene81615:intron 40.0%
AGGAACATTCCTTGTTGGTA+AGG + chr5.1:67547738-67547757 None:intergenic 40.0%
AGGTACCACGAAATTTGTGT+AGG - chr5.1:67549089-67549108 MS.gene81615:CDS 40.0%
AGTGAAAGTGGAATGGATAG+TGG + chr5.1:67551428-67551447 None:intergenic 40.0%
ATCTTGCAGCCAAATGCAAA+GGG + chr5.1:67550923-67550942 None:intergenic 40.0%
CACAAATCCGGCATAAATGT+CGG + chr5.1:67551939-67551958 None:intergenic 40.0%
CACACGAATCAGTACCAAAA+AGG - chr5.1:67549995-67550014 MS.gene81615:intron 40.0%
CATTATTATATGCTGGGGTC+AGG + chr5.1:67548797-67548816 None:intergenic 40.0%
CGCACGCCTTGTATTATTTA+AGG + chr5.1:67550171-67550190 None:intergenic 40.0%
CTAGGTCTTAAGTGTAAACG+AGG + chr5.1:67549539-67549558 None:intergenic 40.0%
CTCGTTTACACTTAAGACCT+AGG - chr5.1:67549537-67549556 MS.gene81615:intron 40.0%
CTGACCATAAGATAGTGAGA+TGG + chr5.1:67549609-67549628 None:intergenic 40.0%
CTTCATATTGCAGCAAACCA+TGG - chr5.1:67550810-67550829 MS.gene81615:intron 40.0%
CTTCATGATAGCTGCTACAA+CGG + chr5.1:67548493-67548512 None:intergenic 40.0%
CTTTACCTTGCGGTTGAAAA+TGG - chr5.1:67548396-67548415 MS.gene81615:intron 40.0%
GAGGCATATCACTTGGTATA+TGG - chr5.1:67547857-67547876 MS.gene81615:CDS 40.0%
GATCCCATCTCACTATCTTA+TGG - chr5.1:67549602-67549621 MS.gene81615:intron 40.0%
GCAAATGCTGCACAATTCAA+AGG - chr5.1:67550661-67550680 MS.gene81615:intron 40.0%
GCAGTAGCAAAGGTTAGTAA+AGG + chr5.1:67551983-67552002 None:intergenic 40.0%
GCATATCACTTGGTATATGG+GGG - chr5.1:67547860-67547879 MS.gene81615:CDS 40.0%
GCTATCATGAAGCAGAATCA+AGG - chr5.1:67548501-67548520 MS.gene81615:intron 40.0%
GGAAGGAAAATCCTCAAGAT+TGG + chr5.1:67551811-67551830 None:intergenic 40.0%
GGATGCAGTCAAACTAATCT+TGG - chr5.1:67548425-67548444 MS.gene81615:intron 40.0%
GGCATATCACTTGGTATATG+GGG - chr5.1:67547859-67547878 MS.gene81615:CDS 40.0%
GTACTAGGAACATTCCTTGT+TGG + chr5.1:67547743-67547762 None:intergenic 40.0%
GTGCAGACCAAGATAGATAA+AGG + chr5.1:67551501-67551520 None:intergenic 40.0%
GTTATGGTTTGATAGGTCAC+AGG + chr5.1:67549640-67549659 None:intergenic 40.0%
GTTTAGCATCACCAATCTTG+AGG - chr5.1:67551797-67551816 MS.gene81615:intron 40.0%
TACGGGTCAAATAAACGGTT+TGG - chr5.1:67549935-67549954 MS.gene81615:intron 40.0%
TATGGTTTGATAGGTCACAG+GGG + chr5.1:67549638-67549657 None:intergenic 40.0%
TTACCTTGCGGTTGAAAATG+GGG - chr5.1:67548398-67548417 MS.gene81615:intron 40.0%
TTAGTAAAGGGTCATGTTGC+TGG + chr5.1:67551970-67551989 None:intergenic 40.0%
TTCATGATAGCTGCTACAAC+GGG + chr5.1:67548492-67548511 None:intergenic 40.0%
TTTCAATACCAAGCGGGTAT+TGG + chr5.1:67551900-67551919 None:intergenic 40.0%
! AAAGTGTCAAGCATCTCTGT+GGG + chr5.1:67550774-67550793 None:intergenic 40.0%
! AGTGAATAAGTAGGGTGTTC+GGG - chr5.1:67548763-67548782 MS.gene81615:intron 40.0%
! TTGAGGATTTTCCTTCCACA+AGG - chr5.1:67551814-67551833 MS.gene81615:CDS 40.0%
! TTTTCACCGTTGGAGTAGAT+TGG + chr5.1:67551405-67551424 None:intergenic 40.0%
!! AAAAGTGTCAAGCATCTCTG+TGG + chr5.1:67550775-67550794 None:intergenic 40.0%
!! CAAGAGCCGTTTCATTTTTC+TGG + chr5.1:67551016-67551035 None:intergenic 40.0%
AAGTGTCAAGCATCTCTGTG+GGG + chr5.1:67550773-67550792 None:intergenic 45.0%
ACACAACACACCTACTTTGG+GGG - chr5.1:67549453-67549472 MS.gene81615:intron 45.0%
AGGAGGGAGATGTTAATAGG+AGG - chr5.1:67551327-67551346 MS.gene81615:intron 45.0%
CGACACAACACACCTACTTT+GGG - chr5.1:67549451-67549470 MS.gene81615:intron 45.0%
CTACACATTGCAGCTAGGTA+TGG - chr5.1:67547950-67547969 MS.gene81615:intron 45.0%
CTGGATGTAGGTCACAAATC+CGG + chr5.1:67551951-67551970 None:intergenic 45.0%
GACACAACACACCTACTTTG+GGG - chr5.1:67549452-67549471 MS.gene81615:intron 45.0%
GATACGATGTTCCAACATCC+TGG + chr5.1:67550230-67550249 None:intergenic 45.0%
GATCTTGCAGCCAAATGCAA+AGG + chr5.1:67550924-67550943 None:intergenic 45.0%
GCTAGCCGGAGTATGAATTA+AGG - chr5.1:67550446-67550465 MS.gene81615:intron 45.0%
GCTTAGTGAGGCATATCACT+TGG - chr5.1:67547850-67547869 MS.gene81615:CDS 45.0%
GGAGGGAGATGTTAATAGGA+GGG - chr5.1:67551328-67551347 MS.gene81615:intron 45.0%
GGTTGTTACAGTAAGCCTTG+TGG + chr5.1:67551832-67551851 None:intergenic 45.0%
GTGAACATGGAGAATGCTGA+AGG - chr5.1:67548222-67548241 MS.gene81615:intron 45.0%
GTTGAGGATGTCCTGTATGA+CGG + chr5.1:67551676-67551695 None:intergenic 45.0%
TACACCAAAGCTGTGAAGCA+CGG + chr5.1:67549705-67549724 None:intergenic 45.0%
TACAGATATGCGCGTTTGCT+TGG - chr5.1:67550120-67550139 MS.gene81615:intron 45.0%
TAGGTGTGTTGTGTCGAACT+GGG + chr5.1:67549447-67549466 None:intergenic 45.0%
TCGACACAACACACCTACTT+TGG - chr5.1:67549450-67549469 MS.gene81615:intron 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr5.1:67549584-67549603 None:intergenic 45.0%
TCTGGATTTGGCAGTAGCAA+AGG + chr5.1:67551993-67552012 None:intergenic 45.0%
TCTTGCAGCCAAATGCAAAG+GGG + chr5.1:67550922-67550941 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr5.1:67549594-67549613 None:intergenic 45.0%
TTACATGTTGCTGCAAGAGC+CGG - chr5.1:67548052-67548071 MS.gene81615:intron 45.0%
TTCAACGGTTGAGATGTGTC+CGG + chr5.1:67548074-67548093 None:intergenic 45.0%
TTCTTCCTCTTCAACACCAG+CGG - chr5.1:67552057-67552076 MS.gene81615:CDS 45.0%
! GTGAATAAGTAGGGTGTTCG+GGG - chr5.1:67548764-67548783 MS.gene81615:intron 45.0%
! GTTACAGTAAGCCTTGTGGA+AGG + chr5.1:67551828-67551847 None:intergenic 45.0%
!! ACACTAGTGGATTTCCTTCC+TGG + chr5.1:67549487-67549506 None:intergenic 45.0%
!! ACCAAGCGGGTATTGGAAAT+CGG + chr5.1:67551893-67551912 None:intergenic 45.0%
!! AGAATCGCTGGCTTTGAGAT+CGG + chr5.1:67551604-67551623 None:intergenic 45.0%
!! AGATTGGTTCGGGAACTCAT+TGG - chr5.1:67548317-67548336 MS.gene81615:intron 45.0%
!! TGGATAGTGGTTTTCACCGT+TGG + chr5.1:67551415-67551434 None:intergenic 45.0%
AACACCGTGCTTCACAGCTT+TGG - chr5.1:67549698-67549717 MS.gene81615:intron 50.0%
AAGCCAGCGATTCTGACCTT+TGG - chr5.1:67551610-67551629 MS.gene81615:CDS 50.0%
AAGCTGTGAAGCACGGTGTT+AGG + chr5.1:67549698-67549717 None:intergenic 50.0%
AGGGTCATGTTGCTGGATGT+AGG + chr5.1:67551963-67551982 None:intergenic 50.0%
ATAGGACGGAGGAGAGACAT+CGG + chr5.1:67552113-67552132 None:intergenic 50.0%
ATGCCAAAGGTCAGAATCGC+TGG + chr5.1:67551616-67551635 None:intergenic 50.0%
CACCGTTGGAGTAGATTGGT+TGG + chr5.1:67551401-67551420 None:intergenic 50.0%
CAGAACCGCAACAATTCTCG+CGG - chr5.1:67552148-67552167 MS.gene81615:CDS 50.0%
CAGTGCTACACATTGCAGCT+AGG - chr5.1:67547945-67547964 MS.gene81615:intron 50.0%
CATCGTCAAGACGATGCCAA+AGG + chr5.1:67551629-67551648 None:intergenic 50.0%
GATGTTCCAACATCCTGGCA+CGG + chr5.1:67550225-67550244 None:intergenic 50.0%
GGACTCACCGACATTTATGC+CGG - chr5.1:67551929-67551948 MS.gene81615:CDS 50.0%
GTAGGTGTGTTGTGTCGAAC+TGG + chr5.1:67549448-67549467 None:intergenic 50.0%
TACAAGGCGTGCGTACAAGT+AGG - chr5.1:67550178-67550197 MS.gene81615:intron 50.0%
TCCGATTTCCAATACCCGCT+TGG - chr5.1:67551889-67551908 MS.gene81615:CDS 50.0%
TGACATGATCGAGCAGGTTG+TGG + chr5.1:67551546-67551565 None:intergenic 50.0%
TGCGGTTGAAAATGGGGACA+AGG - chr5.1:67548404-67548423 MS.gene81615:intron 50.0%
TGGAGACACCCCTTTGCATT+TGG - chr5.1:67550911-67550930 MS.gene81615:intron 50.0%
TTCGTGTGTTGCAGATCAGC+TGG + chr5.1:67549983-67550002 None:intergenic 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr5.1:67549482-67549501 None:intergenic 50.0%
! TGTCCCCATTTTCAACCGCA+AGG + chr5.1:67548404-67548423 None:intergenic 50.0%
AAGAATGATGCGAAGCCGGG+GGG - chr5.1:67548459-67548478 MS.gene81615:intron 55.0%
ACTGAACCGTGCCAGGATGT+TGG - chr5.1:67550216-67550235 MS.gene81615:intron 55.0%
AGAGACATCGGACAGTGGTG+TGG + chr5.1:67552101-67552120 None:intergenic 55.0%
CAAGAATGATGCGAAGCCGG+GGG - chr5.1:67548458-67548477 MS.gene81615:intron 55.0%
CACGACCGCGAGAATTGTTG+CGG + chr5.1:67552156-67552175 None:intergenic 55.0%
CCAAGAATGATGCGAAGCCG+GGG - chr5.1:67548457-67548476 MS.gene81615:intron 55.0%
CCCAAGAATGATGCGAAGCC+GGG - chr5.1:67548456-67548475 MS.gene81615:intron 55.0%
CCCCAAGAATGATGCGAAGC+CGG - chr5.1:67548455-67548474 MS.gene81615:intron 55.0%
CCCGGCTTCGCATCATTCTT+GGG + chr5.1:67548459-67548478 None:intergenic 55.0%
CCGGCTTCGCATCATTCTTG+GGG + chr5.1:67548458-67548477 None:intergenic 55.0%
CCGTCCTATTCCGTGAGCAA+CGG - chr5.1:67552124-67552143 MS.gene81615:CDS 55.0%
CCGTTGCTCACGGAATAGGA+CGG + chr5.1:67552127-67552146 None:intergenic 55.0%
CGTCCTATTCCGTGAGCAAC+GGG - chr5.1:67552125-67552144 MS.gene81615:CDS 55.0%
TCAAGCATCTCTGTGGGGTC+AGG + chr5.1:67550768-67550787 None:intergenic 55.0%
TGGCACGGTTCAGTGTGTCT+GGG + chr5.1:67550210-67550229 None:intergenic 55.0%
TTCAACACCAGCGGCACTTG+TGG - chr5.1:67552066-67552085 MS.gene81615:CDS 55.0%
TTGCTCACGGAATAGGACGG+AGG + chr5.1:67552124-67552143 None:intergenic 55.0%
! AAGTGCCGCTGGTGTTGAAG+AGG + chr5.1:67552065-67552084 None:intergenic 55.0%
!! TGCATCTTTTGGTGGCCACG+TGG - chr5.1:67550713-67550732 MS.gene81615:intron 55.0%
ACAACGGGTGATAGTCCCCC+CGG + chr5.1:67548477-67548496 None:intergenic 60.0%
CAGACACACTGAACCGTGCC+AGG - chr5.1:67550209-67550228 MS.gene81615:intron 60.0%
CCCCGGCTTCGCATCATTCT+TGG + chr5.1:67548460-67548479 None:intergenic 60.0%
CGCAACAATTCTCGCGGTCG+TGG - chr5.1:67552154-67552173 MS.gene81615:CDS 60.0%
CTGCCCGTTGCTCACGGAAT+AGG + chr5.1:67552131-67552150 None:intergenic 60.0%
CTGGCACGGTTCAGTGTGTC+TGG + chr5.1:67550211-67550230 None:intergenic 60.0%
GACATCGGACAGTGGTGTGG+TGG + chr5.1:67552098-67552117 None:intergenic 60.0%
GGAGGAGAGACATCGGACAG+TGG + chr5.1:67552106-67552125 None:intergenic 60.0%
GGGGGATGACATGATCGAGC+AGG + chr5.1:67551552-67551571 None:intergenic 60.0%
! ACTTTGGGGGCTACCAAGCC+AGG - chr5.1:67549466-67549485 MS.gene81615:intron 60.0%
! GGCTTGGTAGCCCCCAAAGT+AGG + chr5.1:67549466-67549485 None:intergenic 60.0%
! GTGTTAGCCACAAGTGCCGC+TGG + chr5.1:67552076-67552095 None:intergenic 60.0%
GCGGTTCTGCCCGTTGCTCA+CGG + chr5.1:67552137-67552156 None:intergenic 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr5.1:67549470-67549489 MS.gene81615:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 67547707 67552210 67547707 ID=MS.gene81615
chr5.1 mRNA 67547707 67552210 67547707 ID=MS.gene81615.t1;Parent=MS.gene81615
chr5.1 exon 67551811 67552210 67551811 ID=MS.gene81615.t1.exon1;Parent=MS.gene81615.t1
chr5.1 CDS 67551811 67552210 67551811 ID=cds.MS.gene81615.t1;Parent=MS.gene81615.t1
chr5.1 exon 67551395 67551736 67551395 ID=MS.gene81615.t1.exon2;Parent=MS.gene81615.t1
chr5.1 CDS 67551395 67551736 67551395 ID=cds.MS.gene81615.t1;Parent=MS.gene81615.t1
chr5.1 exon 67548792 67549292 67548792 ID=MS.gene81615.t1.exon3;Parent=MS.gene81615.t1
chr5.1 CDS 67548792 67549292 67548792 ID=cds.MS.gene81615.t1;Parent=MS.gene81615.t1
chr5.1 exon 67547707 67547900 67547707 ID=MS.gene81615.t1.exon4;Parent=MS.gene81615.t1
chr5.1 CDS 67547707 67547900 67547707 ID=cds.MS.gene81615.t1;Parent=MS.gene81615.t1
Gene Sequence

>MS.gene81615

ATGCCTCCTCAAACATTACAAGATGAAGCCTTACCAACAAGGAATGTTCCTAGTACTTATAAGGAACCTAAACTTGAATTTGAAGCCTCAGAAGTAACTGAGTTCCTTCCAAAATGTTGCAAATTTGATAATCAAATTAATTTGCTTAGTGAGGCATATCACTTGGTATATGGGGGTCCACGAGATTTGTTGTATGATTCCTCTAATCTAACAGAAATTAAGACCCCTATGAAAAACACAGTGCTACACATTGCAGCTAGGTATGGAAAAGATGACATTGTGAGTCTTGTAATTGAACGTGATGCAAAACTTTTGTTCACATTTAACAAAAACAAAGATAGTGCTTTACATGTTGCTGCAAGAGCCGGACACATCTCAACCGTTGAAAAGCTGTTAGCATGTTATGCTAATATTGAACGGCATGATATAAAAATGGCTTGGTTAGAATACACTAACAATTGGATGACCCAGAAGACTATGATGAAGTGATGAATATGGAGGACCTGTTACATTTTGTGAACATGGAGAATGCTGAAGGAAACACTATGTTACATGAGGCAATATTATGTGGGGATAAAATCTTCAAAGTTTTTGAACGTTACAAAACTAAAGATTGGTTCGGGAACTCATTGGCAAATTGTTGCTATGAATTTGCGTTAGATATTATTAATCATGCAAAGAAATCAGTACTTTACCTTGCGGTTGAAAATGGGGACAAGGATGCAGTCAAACTAATCTTGGAGAATTGCCCCAAGAATGATGCGAAGCCGGGGGGACTATCACCCGTTGTAGCAGCTATCATGAAGCAGAATCAAGGTATGTAATTAAATAGTTAAGTTGATCATAACATTGTTGTTCAATCACTTGAATGATATAACAATATGTTTCCCTTGGCTAAAAATTACCATTTTTCTTTGAATTATTAAATGGGTTTCACCAATAGTTTTATGACATTATTTTTTTTTAAATTATTAATTTATTCTAAAACAATTAATTCCAATATTCATCTTTTTTTTTTTGTCAAGTAGCCTAGTGACTAGAATTCACCTTTCTCAAAGTGAATAAGTAGGGTGTTCGGGGTTCGAACCCTGACCCCAGCATATAATAATGCATGTCTCTGTCAACTGAGCTATGTTCACTGAGACAATATTCATCTATTTAGCTTGGTACTAAATAGATAAAACATCCACCATTATTGTTTTCGATAAAAAAAATTACTTTTAACTTTCTTAACTAGGGTTCCCTAGTCAATAGTTAACATTTCCCTTTATTCTCCTAAAAAAACATTTCCCTTTATTTATTTTCTATCTTTGCTAATGTAAGTCTTACTCTAAAACACATCTAAGTATTTAACACTATTTCTTAATTAGTAGAAATTTACAAGGTACCACGAAATTTGTGTAGGATTTTTTTTTGAGAGCTAATTTGTGTAGGACTTGTGAAATTCCAGCATAGTAGCTTTCATATGTTTTATACGATGTTTCAACATCAGATACGAACAGAATGTTGAGTAAGATGTTTTAACATCGAGTTAGCAGAAAACAGATAGATCAAGGCAAATATAACAAATGTTGAATTTTTAGCGCATTAGTTAGAAGTTGTTCTATGTGATGTTTCAATTCCAGATGCACAGAAAGCATATGTTCCGTTTAATGTTGCAACATCGTGCTAGCAGTAAACATAAACAAAACAGCAAAAACAAAGACAAGAAAGTAAAGAAAACAGAGAGTTTGTTAACCCAGTTCGACACAACACACCTACTTTGGGGGCTACCAAGCCAGGAAGGAAATCCACTAGTGTAGTTCTTATTCTAAAGCTCTCAGCAAACTCCTCGTTTACACTTAAGACCTAGGACCTATCCGTATTGATTTCAACCTAGGAACTCCTAGATCTGAGATCCCATCTCACTATCTTATGGTCAGTCACAGCCCCTGTGACCTATCAAACCATAACACAAACAAACAGTGAAGTTACCTTCAAACAAACTACCTAACACCGTGCTTCACAGCTTTGGTGTAGTGAACACGAGTTTACAACTCAACAAATAGTCCTTAGCATGTATCAAGATGATACAAGAAAGGCTCACAATAAAACATAACTAAACTTGCATCAACACGATACAAGAGTAGAACACACAAAGACTCAAAACCCTAAAAATTAATCTCTTTTTAGTTTGACGGCTTGAATGAATAATTAGGTCTTGAAGTCTTGAATATATACTGAAGCAATACGGGTCAAATAAACGGTTTGGGCTTCAGAACAAAGCAGATCGTCCAGCTGATCTGCAACACACGAATCAGTACCAAAAAGGAAAGTCCTAAAAAGTAGGAACATCTTTAGGAACTTCAAAACAGATCCAAATGATTCCTAAAATATTACCAATCTTTTAGGAATAATAAAACAACTGATTCTGTACAGATATGCGCGTTTGCTTGGTCAGTAAGATAAGTAAATATGGTTTCCTTAAATAATACAAGGCGTGCGTACAAGTAGGCATGAACCCAGACACACTGAACCGTGCCAGGATGTTGGAACATCGTATCCAACATCATACATATACATGAGTATTTGTTTTAGCAACAATGAAGCCAATACTCAAATACCCAATAACTTGTTTTCAAAATAGTGAGATTTATTTAAATATCAACCGAAGATATAGAATGTTTTGACAAATGTTGCTAGCCCTCTTCTTTGTAATATTAGTCATTTCTCAAATAATATCCGAAAATAACAAATGTTGCTAGCCGGAGTATGAATTAAGGTTTTATGAGGTAAATTGCAATTACTAATTACATTATTGGATAATAATTATGTTTATGTGTCAGAAATGCTCAACATCATACTAAAAAACAAGCCAATTTGGATCCATTTAAGGGACAAAGATGAAAGGCTTCCAATTCATTACGCATCATCTTTAGGTTACTTTGAAGGTGTTGAATTATTACTTGGCATATGCAAATGCTGCACAATTCAAAGGGACAAATATGGTTATTTCCCAATTCATCATGCATCTTTTGGTGGCCACGTGGAAATAGTAAAAAAATTGTTGGAATATTGTCCTGACCCCACAGAGATGCTTGACACTTTTCTTGAACGTAATATTCTTCATATTGCAGCAAACCATGGAAAACATGATGTGATACGCTACATACTTGAAAGTGAAGTTCATGAACACCGTCAGATGATAAATCAGAAAGATAAGTATGGAGACACCCCTTTGCATTTGGCTGCAAGATCATGTCATCCCACAACTGTGTTCTACTTAGTTAACCAAAATAATGAAAAAGTGCATCTTGATATGGTTAACCAGAAAAATGAAACGGCTCTTGACATTGTTAATTCACTCTACAAGCTTGATAAATCATCTTTAAGACAGGCAAGTAGTTCTTCTATCCCCTCACTAACTCACAAATTTATAAGTATGTTGCATAGTTATTATCATACATATCTCTACAAAAAATTAGGATTTGCAAAGCGTTTTATCTTTATCAAATCAATTATTAAATGAGTCACAAACATTGGCGAATAGTGAATCAATAATAAGCTCATTTAATTAGCAGGTGATTATTAAGACATGGTGGTTCTTATGAATAATATATGTGTATATATAAAAGAATAATAGGAGGGAGATGTTAATAGGAGGGAGATGTTAATTCCTCCAAAAATCATGTTGATGACACTTCATCAGCAACCAACCAATCTACTCCAACGGTGAAAACCACTATCCATTCCACTTTCACTATTAACAATGTCAAAACTATCATTCTGGTGATATTGGACAATGATTCCAACCTTTATCTATCTTGGTCTGCACTTTTTTTGGTGCAAGCACATGTCCACAACCTGCTCGATCATGTCATCCCCCATTTGAAGAAAAAGTCATCTGTGCGACAACCGATCTCAAAGCCAGCGATTCTGACCTTTGGCATCGTCTTGACGATGTTGTGCTGCAATGAATGTATGCAACCGTCATACAGGACATCCTCAACTCTATCCTTGTGATTAATGATACTACCAAAGCATGTTGGAATCGCATTGCTGCCATGTTCAATGACAACAAACACTCAAGGGCTGTGCAACTTGAAAACTAGTTTAGCATCACCAATCTTGAGGATTTTCCTTCCACAAGGCTTACTGTAACAACCTCAAACTTCTCTTTGATCAACTTGCAAATGTCGATTCTCCGATTTCCAATACCCGCTTGGTATTGAAAATGATTTCTGGACTCACCGACATTTATGCCGGATTTGTGACCTACATCCAGCAACATGACCCTTTACTAACCTTTGCTACTGCCAAATCCAGATTAGAGCTTGAAGAATCAACTATTCTTCAACGTGCTGCTCGTGATTCTTCCTCTTCAACACCAGCGGCACTTGTGGCTAACACCACCACACCACTGTCCGATGTCTCTCCTCCGTCCTATTCCGTGAGCAACGGGCAGAACCGCAACAATTCTCGCGGTCGTGGAAAGAAAAACAACTGCAACAACAACAGTGGCTAA
Protein sequence

>MS.gene81615.t1

MPPQTLQDEALPTRNVPSTYKEPKLEFEASEVTEFLPKCCKFDNQINLLSEAYHLVYGGPRDLLYDSSNLTEIKTPMKNTVLHIAARYGKDDIVSLVIERDAKLLFTFNKNKDSALHVAARAGHISTVEKLLAYYDEVMNMEDLLHFVNMENAEGNTMLHEAILCGDKIFKVFERYKTKDWFGNSLANCCYEFALDIINHAKKSVLYLAVENGDKDAVKLILENCPKNDAKPGGLSPVVAAIMKQNQGYFEGVELLLGICKCCTIQRDKYGYFPIHHASFGGHVEIVKKLLEYCPDPTEMLDTFLERNILHIAANHGKHDVIRYILESEVHEHRQMINQKDKYGDTPLHLAARSCHPTTVFYLVNQNNEKVHLDMVNQKNETALDIVNSLYKLDKSSLRQASSSSIPSLTHKFIKLEESTILQRAARDSSSSTPAALVANTTTPLSDVSPPSYSVSNGQNRNNSRGRGKKNNCNNNSG