AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070511

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070511.t1 MTR_5g085480 67.549 718 206 9 28 736 2 701 0.0 898
MS.gene070511.t1 MTR_5g085830 59.341 728 251 11 4 727 21 707 0.0 803
MS.gene070511.t1 MTR_5g085810 57.687 735 238 12 27 725 36 733 0.0 759
MS.gene070511.t1 MTR_5g085480 66.427 557 163 7 188 736 1 541 0.0 680
MS.gene070511.t1 MTR_2g033050 82.071 396 67 3 75 467 1 395 0.0 670
MS.gene070511.t1 MTR_5g085500 58.317 499 108 10 300 732 1 465 1.20e-173 506
MS.gene070511.t1 MTR_5g085490 70.629 286 80 3 2 285 9 292 9.67e-137 405
MS.gene070511.t1 MTR_2g033045 79.452 219 23 2 513 731 28 224 4.31e-106 326
MS.gene070511.t1 MTR_5g085440 82.775 209 26 4 536 736 159 365 3.54e-104 323
MS.gene070511.t1 MTR_5g085440 80.519 154 30 0 2 155 3 156 1.05e-82 267
MS.gene070511.t1 MTR_5g085520 69.697 198 58 2 82 277 1 198 4.13e-86 270
MS.gene070511.t1 MTR_5g085530 78.082 73 15 1 279 350 1 73 4.39e-33 122
MS.gene070511.t1 MTR_2g096190 26.316 475 277 15 235 691 63 482 5.35e-24 107
MS.gene070511.t1 MTR_2g101310 23.198 444 286 13 277 679 145 574 5.82e-23 104
MS.gene070511.t1 MTR_7g100390 27.549 461 267 13 235 677 46 457 2.08e-22 102
MS.gene070511.t1 MTR_7g100390 23.759 282 184 8 169 439 21 282 1.17e-12 71.6
MS.gene070511.t1 MTR_4g062100 25.486 463 276 15 235 677 67 480 1.58e-21 99.8
MS.gene070511.t1 MTR_7g117620 24.421 475 285 14 239 697 82 498 3.11e-20 95.5
MS.gene070511.t1 MTR_1g032100 24.845 483 301 13 231 700 49 482 1.97e-19 92.8
MS.gene070511.t1 MTR_1g069110 24.558 452 275 11 286 710 30 442 1.02e-18 90.1
MS.gene070511.t1 MTR_2g096760 33.529 170 101 5 274 434 15 181 4.99e-18 87.8
MS.gene070511.t1 MTR_2g101310 23.143 350 223 10 277 594 145 480 1.21e-16 84.0
MS.gene070511.t1 MTR_1g115575 22.761 536 318 17 228 706 63 559 4.09e-16 82.8
MS.gene070511.t1 MTR_2g101320 22.770 426 290 9 277 670 145 563 7.03e-16 82.0
MS.gene070511.t1 MTR_8g105260 22.440 459 262 12 231 677 91 467 3.45e-15 79.7
MS.gene070511.t1 MTR_8g072510 27.232 224 145 5 245 455 13 231 2.16e-13 73.6
MS.gene070511.t1 MTR_8g062410 27.556 225 144 6 245 455 13 232 3.07e-13 73.2
MS.gene070511.t1 MTR_7g099580 29.101 189 122 6 242 420 12 198 3.94e-13 71.6
MS.gene070511.t1 MTR_7g100430 24.272 309 192 9 114 418 65 335 1.39e-12 71.2
MS.gene070511.t1 MTR_7g099570 24.333 300 207 9 242 529 9 300 5.40e-12 69.7
MS.gene070511.t1 MTR_8g467780 29.189 185 109 5 289 455 62 242 6.17e-11 65.9
MS.gene070511.t1 MTR_5g085560 44.681 94 37 3 514 593 24 116 6.45e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070511.t1 AT1G03670 28.702 655 325 17 84 720 73 603 1.09e-61 218
MS.gene070511.t1 AT4G03460 31.412 503 257 11 233 720 156 585 3.06e-48 180
MS.gene070511.t1 AT4G03460 31.412 503 257 11 233 720 188 617 3.72e-48 180
MS.gene070511.t1 AT4G03500 29.676 401 232 8 84 482 80 432 1.16e-39 155
MS.gene070511.t1 AT4G03500 29.676 401 232 8 84 482 80 432 1.16e-39 155
MS.gene070511.t1 AT4G03500 29.676 401 232 8 84 482 103 455 1.24e-39 155
MS.gene070511.t1 AT4G03490 28.889 450 237 13 84 503 37 433 1.47e-36 146
MS.gene070511.t1 AT4G03490 28.889 450 237 13 84 503 27 423 1.81e-36 146
MS.gene070511.t1 AT4G03490 28.889 450 237 13 84 503 37 433 2.24e-36 146
MS.gene070511.t1 AT4G03450 25.994 654 351 20 87 727 75 608 6.09e-36 144
MS.gene070511.t1 AT4G03450 26.368 603 325 18 87 676 75 571 1.25e-34 140
MS.gene070511.t1 AT4G03480 28.958 480 270 16 75 511 142 593 7.77e-33 135
MS.gene070511.t1 AT4G03480 29.299 471 283 17 75 511 142 596 9.30e-33 135
MS.gene070511.t1 AT4G03440 29.777 403 228 14 79 451 114 491 4.68e-29 124
MS.gene070511.t1 AT4G03440 29.777 403 228 14 79 451 107 484 4.84e-29 124
MS.gene070511.t1 AT4G03440 29.777 403 228 14 79 451 107 484 4.84e-29 124
MS.gene070511.t1 AT4G03490 26.444 450 210 12 84 503 27 385 9.64e-29 122
MS.gene070511.t1 AT4G03490 23.299 588 378 20 160 724 2 539 2.99e-21 99.4
MS.gene070511.t1 AT4G03490 26.444 450 210 12 84 503 17 375 1.22e-28 122
MS.gene070511.t1 AT4G03490 23.132 562 364 18 184 724 15 529 5.05e-21 98.6
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G05040 28.146 437 249 12 75 492 100 490 1.43e-28 121
MS.gene070511.t1 AT4G03470 28.095 420 238 12 75 484 111 476 8.93e-28 120
MS.gene070511.t1 AT4G14390 26.923 390 230 10 74 453 123 467 4.65e-26 114
MS.gene070511.t1 AT4G14390 26.923 390 230 10 74 453 104 448 5.57e-26 114
MS.gene070511.t1 AT4G14390 26.923 390 230 10 74 453 104 448 6.18e-26 113
MS.gene070511.t1 AT4G14390 26.854 391 230 10 74 453 123 468 1.56e-25 112
MS.gene070511.t1 AT5G02620 26.216 473 286 14 235 688 53 481 1.41e-23 105
MS.gene070511.t1 AT5G02620 26.216 473 286 14 235 688 53 481 1.41e-23 105
MS.gene070511.t1 AT5G02620 26.216 473 286 14 235 688 53 481 1.41e-23 105
MS.gene070511.t1 AT3G12360 22.957 514 320 13 234 735 125 574 5.69e-23 104
MS.gene070511.t1 AT4G14400 27.366 391 226 14 80 453 91 440 6.98e-23 104
MS.gene070511.t1 AT3G12360 22.957 514 320 13 234 735 113 562 7.04e-23 103
MS.gene070511.t1 AT4G14400 27.366 391 226 14 80 453 25 374 1.30e-22 103
MS.gene070511.t1 AT4G14400 27.366 391 226 14 80 453 25 374 1.30e-22 103
MS.gene070511.t1 AT5G02620 25.000 476 277 14 235 672 53 486 3.43e-21 98.6
MS.gene070511.t1 AT5G02620 25.000 476 277 14 235 672 53 486 3.43e-21 98.6
MS.gene070511.t1 AT5G60070 24.622 463 283 12 235 677 70 486 6.13e-21 97.8
MS.gene070511.t1 AT2G31820 23.636 550 322 17 171 692 130 609 7.22e-20 94.7
MS.gene070511.t1 AT5G54710 22.871 634 364 20 84 670 19 574 4.32e-19 92.4
MS.gene070511.t1 AT5G50140 23.077 481 296 13 277 700 34 497 1.58e-18 90.1
MS.gene070511.t1 AT5G54710 22.941 510 303 15 177 670 94 529 1.11e-17 87.8
MS.gene070511.t1 AT3G09550 23.714 447 284 13 234 672 146 543 1.84e-17 87.0
MS.gene070511.t1 AT3G09550 24.648 284 178 8 114 394 92 342 1.12e-12 72.0
MS.gene070511.t1 AT3G09550 23.714 447 284 13 234 672 139 536 2.06e-17 87.0
MS.gene070511.t1 AT3G09550 24.648 284 178 8 114 394 85 335 1.20e-12 71.6
MS.gene070511.t1 AT3G09550 23.714 447 284 13 234 672 139 536 2.06e-17 87.0
MS.gene070511.t1 AT3G09550 24.648 284 178 8 114 394 85 335 1.20e-12 71.6
MS.gene070511.t1 AT1G10340 23.450 516 302 17 177 671 63 506 5.06e-16 82.4
MS.gene070511.t1 AT2G01680 22.777 461 294 13 231 677 52 464 6.43e-16 82.0
MS.gene070511.t1 AT2G24600 23.872 532 314 17 177 684 63 527 2.71e-15 80.1
MS.gene070511.t1 AT2G24600 23.872 532 314 17 177 684 63 527 2.71e-15 80.1
MS.gene070511.t1 AT1G05640 23.855 415 261 13 307 677 156 559 1.36e-14 78.2
MS.gene070511.t1 AT1G10340 23.450 516 298 18 177 671 63 502 1.51e-14 77.8
MS.gene070511.t1 AT1G07710 23.965 459 287 11 235 677 63 475 2.70e-14 76.6
MS.gene070511.t1 AT1G07710 23.965 459 287 11 235 677 63 475 2.70e-14 76.6
MS.gene070511.t1 AT2G28840 28.261 230 144 8 274 489 15 237 7.79e-13 72.0
MS.gene070511.t1 AT5G51160 24.262 305 174 6 297 594 40 294 3.57e-12 69.7
MS.gene070511.t1 AT2G24600 25.540 278 170 8 177 447 63 310 7.14e-12 68.9
MS.gene070511.t1 AT2G24600 25.540 278 170 8 177 447 63 310 7.14e-12 68.9
MS.gene070511.t1 AT4G19150 36.220 127 74 3 308 434 20 139 7.50e-12 66.6
MS.gene070511.t1 AT1G14500 29.151 271 166 10 245 498 8 269 1.57e-11 67.8

Find 119 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTATCTGATTCTGATTT+TGG 0.107559 5.4:-67640301 None:intergenic
TTGGTTGGCCAATGTGTTTC+TGG 0.131510 5.4:+67640765 MS.gene070511:CDS
GACTCTTCATCATACTCTTC+TGG 0.146198 5.4:-67637624 None:intergenic
AATTAATTTGATTGTCAAAT+TGG 0.185555 5.4:-67637278 None:intergenic
CGCTCTCATTTCATTATCTT+TGG 0.211926 5.4:+67640702 MS.gene070511:CDS
TTGGACAGCATGATATAAAA+AGG 0.215429 5.4:+67637568 MS.gene070511:CDS
TCCATTGAATGGATCCAATT+TGG 0.217296 5.4:-67638628 None:intergenic
CTTTACCTTGCGGTTGAAAA+TGG 0.224244 5.4:+67637864 MS.gene070511:CDS
TTCGGCTTAGCATCCTTCTT+AGG 0.225197 5.4:-67637924 None:intergenic
GGTTTGGATGCCACTCTTCT+TGG 0.229989 5.4:-67640190 None:intergenic
GTGCTACCATCATACTCTTT+TGG 0.232922 5.4:+67640614 MS.gene070511:CDS
GGCCAATGTGTTTCTGGTTA+TGG 0.260208 5.4:+67640771 MS.gene070511:CDS
ACAATTCAAAGGGACAAATT+AGG 0.261746 5.4:+67638739 MS.gene070511:CDS
ATTGTCAAATTGGCAACATT+TGG 0.262468 5.4:-67637268 None:intergenic
AAAATTGTTATGCCGCTTCT+TGG 0.265426 5.4:+67640676 MS.gene070511:CDS
CAAGAGCTGTTTCGTTGTTT+TGG 0.276243 5.4:-67639080 None:intergenic
TTAAATTTGAACAAAAGTTT+TGG 0.280811 5.4:-67637459 None:intergenic
TTAGCCAGTTATACTAATAT+TGG 0.290809 5.4:+67637549 MS.gene070511:CDS
CTGTCCAATATTAGTATAAC+TGG 0.292747 5.4:-67637553 None:intergenic
CCATACGATGCTAGATGAAT+TGG 0.295113 5.4:-67638769 None:intergenic
TACTAGAAAACAAGCCAAAT+TGG 0.300074 5.4:+67638614 MS.gene070511:CDS
CTTCACATTGCATCAAACTA+TGG 0.318717 5.4:+67638877 MS.gene070511:CDS
CTTCATGATTGCTGCTACAA+TGG 0.331266 5.4:-67637958 None:intergenic
GGATCCCAACAAAGTGATTC+AGG 0.333650 5.4:+67640274 MS.gene070511:CDS
AGAAAGAGTGAAACTTGATT+TGG 0.333662 5.4:+67639053 MS.gene070511:CDS
GTATGATGAAGAGTCAAATA+TGG 0.336358 5.4:+67637632 MS.gene070511:CDS
ACTCTTCATCATACTCTTCT+GGG 0.351775 5.4:-67637623 None:intergenic
AACACTTGGATTAACTGAAT+TGG 0.355598 5.4:+67640639 MS.gene070511:CDS
TTTCATGTTTGTCCATTGAA+TGG 0.371890 5.4:-67638639 None:intergenic
GTTTCACTCTTTCTTTGCCT+TGG 0.372962 5.4:-67639044 None:intergenic
GAGTATGATGGTAGCACTAA+TGG 0.379466 5.4:-67640608 None:intergenic
TGGAGTTTCAACAAATTTGT+TGG 0.381612 5.4:+67637329 MS.gene070511:CDS
GCTATTCTCCAAGATTAGTT+TGG 0.384019 5.4:-67637901 None:intergenic
GAAGCATATCAATTGGTCTA+TGG 0.390920 5.4:+67637309 MS.gene070511:CDS
AGGTGACACTCCTTTGCATT+TGG 0.395086 5.4:+67638978 MS.gene070511:CDS
TGAATCTGAATCACTTGGTT+TGG 0.400624 5.4:-67640206 None:intergenic
TTGTCAAATTGGCAACATTT+GGG 0.406024 5.4:-67637267 None:intergenic
GAGGGTTCAATTTCAAGTTC+AGG 0.407035 5.4:-67637225 None:intergenic
GGATGCTGCCAAACTAATCT+TGG 0.418646 5.4:+67637893 MS.gene070511:CDS
GCTTAATGAAGCATATCAAT+TGG 0.419437 5.4:+67637302 MS.gene070511:CDS
TCGGCTTAGCATCCTTCTTA+GGG 0.421612 5.4:-67637923 None:intergenic
TACAAAACTGAAGATTTGTC+TGG 0.424015 5.4:+67637774 MS.gene070511:CDS
AATGTTTGCAGCATCTTACA+TGG 0.427993 5.4:+67640134 MS.gene070511:intron
GCAGCATGTTTAGCTGTTCC+AGG 0.429250 5.4:+67640502 MS.gene070511:CDS
ACTAAGTAGTACACAGTTGT+AGG 0.432418 5.4:-67639018 None:intergenic
TAAGTGTTGAAACAATTGTA+AGG 0.440585 5.4:-67640462 None:intergenic
CTTCATTACGCAGCATCTAC+AGG 0.442175 5.4:+67638670 MS.gene070511:CDS
TCAAGCATCTCTGTGGGATC+AGG 0.447170 5.4:-67638832 None:intergenic
AGATTTGTCTGGATACTCAT+TGG 0.451663 5.4:+67637785 MS.gene070511:CDS
TCCTTCCATCATCATCTACT+AGG 0.459843 5.4:+67640839 MS.gene070511:CDS
GAAGGTGTTGAATTATTACT+TGG 0.460344 5.4:+67638700 MS.gene070511:CDS
TGAACCTGAATCACTTTGTT+GGG 0.460731 5.4:-67640278 None:intergenic
CTGATCAAGGTGTTAATCCT+TGG 0.467645 5.4:+67640926 MS.gene070511:CDS
GTGACAAGAGCAATATGAGC+AGG 0.467735 5.4:+67637724 MS.gene070511:CDS
CATACGATGCTAGATGAATT+GGG 0.472643 5.4:-67638768 None:intergenic
CAAGGATTAACACCTTGATC+AGG 0.475460 5.4:-67640925 None:intergenic
GTGAACCTGAATCACTTTGT+TGG 0.475536 5.4:-67640279 None:intergenic
AAGGAATGTTAGTAGTGAAA+AGG 0.480134 5.4:+67637200 MS.gene070511:CDS
GCATCTACAGGTTATCTTGA+AGG 0.481004 5.4:+67638682 MS.gene070511:CDS
GCCAAATTGGATCCATTCAA+TGG 0.490408 5.4:+67638627 MS.gene070511:CDS
ACTACTAACATTCCTTGATA+CGG 0.495639 5.4:-67637193 None:intergenic
GCAAATGCTGCACAATTCAA+AGG 0.501880 5.4:+67638728 MS.gene070511:CDS
TTCATGATTGCTGCTACAAT+GGG 0.502846 5.4:-67637957 None:intergenic
TGCAAGATGAAGCCGTATCA+AGG 0.505158 5.4:+67637181 MS.gene070511:CDS
TGATAAATCATCTTTGAGAC+AGG 0.508726 5.4:+67639128 MS.gene070511:CDS
AACAGAAATTGAGACTCCTA+TGG 0.509157 5.4:+67637365 MS.gene070511:CDS
CCAATTCATCTAGCATCGTA+TGG 0.509837 5.4:+67638769 MS.gene070511:CDS
ATCAAACTATGGAAAATATG+AGG 0.510180 5.4:+67638888 MS.gene070511:CDS
CTACATATTGCAGCTTGGTA+TGG 0.527273 5.4:+67637399 MS.gene070511:CDS
CTTGGAGAATAGCCCTAAGA+AGG 0.531650 5.4:+67637911 MS.gene070511:CDS
TTTGTTGGGATCCTTCAAGA+TGG 0.536052 5.4:-67640264 None:intergenic
GAATTTGTGACGGAGAAGAA+TGG 0.536444 5.4:+67637666 MS.gene070511:CDS
GATACGGCTTCATCTTGCAA+TGG 0.537281 5.4:-67637177 None:intergenic
TATCAGTGAACTCAGTTGGT+TGG 0.544404 5.4:+67640750 MS.gene070511:CDS
CAAATGCTGCACAATTCAAA+GGG 0.544446 5.4:+67638729 MS.gene070511:CDS
TGGACTGCACTTAAATCTGC+TGG 0.547758 5.4:+67640154 MS.gene070511:CDS
GCAATCATGAAGCAGAATCA+AGG 0.549271 5.4:+67637969 MS.gene070511:CDS
CAGTTATCAGTGAACTCAGT+TGG 0.550086 5.4:+67640746 MS.gene070511:CDS
ACAATGGGCGATAATCCCTT+CGG 0.551037 5.4:-67637942 None:intergenic
ACTGAAAGTAAACCTGATCA+AGG 0.558900 5.4:+67640913 MS.gene070511:CDS
TTTGGTGAATCTGAATCACT+TGG 0.569155 5.4:-67640211 None:intergenic
GGCTTCCTAGTAGATGATGA+TGG 0.569426 5.4:-67640844 None:intergenic
TGTTGCCCAAAAGAGTATGA+TGG 0.588494 5.4:-67640620 None:intergenic
GTAGATGCTGCGTAATGAAG+AGG 0.589723 5.4:-67638667 None:intergenic
ATTCAATGGACAAACATGAA+AGG 0.591966 5.4:+67638641 MS.gene070511:CDS
GGACTTGTTAGAATTTGTGA+CGG 0.594343 5.4:+67637656 MS.gene070511:CDS
CGCCATAACCAGAAACACAT+TGG 0.594531 5.4:-67640773 None:intergenic
AATGACGTCAGTGACTTCTG+AGG 0.596251 5.4:-67637244 None:intergenic
GCTGTTCCAGGTGAAGCAGA+AGG 0.600903 5.4:+67640514 MS.gene070511:CDS
TCCTAGTAGATGATGATGGA+AGG 0.602445 5.4:-67640840 None:intergenic
TATAATATGCCTCATCCAGA+GGG 0.602495 5.4:+67637135 None:intergenic
TAAGAAGGATGCTAAGCCGA+AGG 0.603220 5.4:+67637926 MS.gene070511:CDS
TGATGAAGATAATGAAAGCA+TGG 0.607796 5.4:-67640567 None:intergenic
AAGAAGGATGCTAAGCCGAA+GGG 0.615867 5.4:+67637927 MS.gene070511:CDS
ATGAGAGCGATTCCAAGAAG+CGG 0.617860 5.4:-67640688 None:intergenic
TGACAAGAGCAATATGAGCA+GGG 0.620460 5.4:+67637725 MS.gene070511:CDS
CATCACTTACACTAAGACCA+AGG 0.620872 5.4:-67640943 None:intergenic
GTGACGGAGAAGAATGGTCA+AGG 0.622304 5.4:+67637672 MS.gene070511:CDS
AGTAGTACACAGTTGTAGGA+TGG 0.631426 5.4:-67639014 None:intergenic
GATCTTGCAGCCAAATGCAA+AGG 0.631460 5.4:-67638988 None:intergenic
AGAAGTGTCAAGCATCTCTG+TGG 0.631679 5.4:-67638839 None:intergenic
GAAAACAGTACTTTACCTTG+CGG 0.637342 5.4:+67637854 MS.gene070511:CDS
TAATGAGAAATGTACCGCAA+TGG 0.638151 5.4:-67640865 None:intergenic
CAGTGCTACATATTGCAGCT+TGG 0.640810 5.4:+67637394 MS.gene070511:CDS
TGCGGTTGAAAATGGAGACA+AGG 0.642265 5.4:+67637872 MS.gene070511:CDS
GAAGTGTCAAGCATCTCTGT+GGG 0.645090 5.4:-67638838 None:intergenic
GCATTACATGTTGCTGCAAG+AGG 0.645771 5.4:+67637498 MS.gene070511:CDS
ATGACGTCAGTGACTTCTGA+GGG 0.647623 5.4:-67637243 None:intergenic
TTACATGTTGCTGCAAGAGG+TGG 0.650910 5.4:+67637501 MS.gene070511:CDS
AAACTATGGAAAATATGAGG+TGG 0.653988 5.4:+67638891 MS.gene070511:CDS
TTATAATATGCCTCATCCAG+AGG 0.656293 5.4:+67637134 None:intergenic
TGATGAAGAGTCAAATATGG+AGG 0.657104 5.4:+67637635 MS.gene070511:CDS
GTGTACTACTTAGTTAACCA+AGG 0.661765 5.4:+67639027 MS.gene070511:CDS
AAAGCAAAGTCCAAGAAGAG+TGG 0.661770 5.4:+67640180 MS.gene070511:CDS
ATTCATCTAGCATCGTATGG+AGG 0.677920 5.4:+67638772 MS.gene070511:CDS
AGGCAACACTATGTTACATG+AGG 0.678880 5.4:+67637692 MS.gene070511:CDS
ACTTCTTCACTACTTCCACA+TGG 0.680029 5.4:-67638795 None:intergenic
AGCATCGTATGGAGGCCATG+TGG 0.694040 5.4:+67638780 MS.gene070511:CDS
CATCTACTAGGAAGCCATTG+CGG 0.700888 5.4:+67640851 MS.gene070511:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTTAAAAGAAACA+AGG + chr5.4:67639993-67640012 MS.gene070511:intron 10.0%
!!! AATTAATGATTTTATATTCT+AGG + chr5.4:67638321-67638340 MS.gene070511:intron 10.0%
!!! GATTAAAAAAGTTTAATTTT+AGG + chr5.4:67639286-67639305 MS.gene070511:intron 10.0%
!!! TATTTCTCTATTTTTTTTTT+TGG - chr5.4:67638273-67638292 None:intergenic 10.0%
!!! TTGATTTTATTATCAATTAA+TGG + chr5.4:67638233-67638252 MS.gene070511:intron 10.0%
!! ATAAATCAAAAAGATAACAA+AGG + chr5.4:67638958-67638977 MS.gene070511:CDS 15.0%
!! ATATAAGTAGATTAAATGAA+TGG + chr5.4:67639218-67639237 MS.gene070511:intron 15.0%
!! TTAGAATACACTAAAAATAA+TGG + chr5.4:67637597-67637616 MS.gene070511:CDS 15.0%
!!! AATTAATTTGATTGTCAAAT+TGG - chr5.4:67637281-67637300 None:intergenic 15.0%
!!! TTAAATTTGAACAAAAGTTT+TGG - chr5.4:67637462-67637481 None:intergenic 15.0%
!! AAAAAATTAACAAGCCAAAA+TGG + chr5.4:67638376-67638395 MS.gene070511:intron 20.0%
!! AAATTAGGATTACTCTTATA+TGG - chr5.4:67640074-67640093 None:intergenic 20.0%
!! AAGTTCAATATAAATCTCTT+AGG - chr5.4:67640047-67640066 None:intergenic 20.0%
!! ACAAAAAATAGATGCAAATT+AGG - chr5.4:67640089-67640108 None:intergenic 20.0%
!! ATTGATTAAAGAACTTAACT+AGG + chr5.4:67639631-67639650 MS.gene070511:intron 20.0%
!! TCTATACACTAGTAAATTTA+GGG - chr5.4:67639808-67639827 None:intergenic 20.0%
!! TGACAAAAATTAAAAGTCTA+TGG + chr5.4:67639878-67639897 MS.gene070511:intron 20.0%
!! TTGATTAAAGAACTTAACTA+GGG + chr5.4:67639632-67639651 MS.gene070511:intron 20.0%
!!! TCATTATCCTTATCTTTTTT+TGG + chr5.4:67640882-67640901 MS.gene070511:CDS 20.0%
!!! TGCTCTTAATTTTAAATGAA+TGG + chr5.4:67639538-67639557 MS.gene070511:intron 20.0%
! AGGGTTAGAATGATATAATA+TGG - chr5.4:67639789-67639808 None:intergenic 25.0%
! ATCAAACTATGGAAAATATG+AGG + chr5.4:67638888-67638907 MS.gene070511:CDS 25.0%
! CTCTATACACTAGTAAATTT+AGG - chr5.4:67639809-67639828 None:intergenic 25.0%
! TTAGAATGATATAATATGGC+AGG - chr5.4:67639785-67639804 None:intergenic 25.0%
! TTAGCCAGTTATACTAATAT+TGG + chr5.4:67637549-67637568 MS.gene070511:CDS 25.0%
!! CTAATAGCTTTTTAACAGTT+GGG - chr5.4:67637533-67637552 None:intergenic 25.0%
!! TCTTTATCTGATTCTGATTT+TGG - chr5.4:67640304-67640323 None:intergenic 25.0%
!! TGGTGATATATATTCCATTT+TGG - chr5.4:67638393-67638412 None:intergenic 25.0%
!!! AGAATTTTTCAAGACACAAT+TGG + chr5.4:67639375-67639394 MS.gene070511:intron 25.0%
!!! CACAATTGGCAAATTTTAAT+TGG + chr5.4:67639389-67639408 MS.gene070511:intron 25.0%
!!! GCTAATTGTTTTGTTGTTTT+TGG - chr5.4:67638485-67638504 None:intergenic 25.0%
!!! TAAGTGTTGAAACAATTGTA+AGG - chr5.4:67640465-67640484 None:intergenic 25.0%
!!! TTCATTATCTTTGGCTTTTA+TGG + chr5.4:67640711-67640730 MS.gene070511:CDS 25.0%
AAACTATGGAAAATATGAGG+TGG + chr5.4:67638891-67638910 MS.gene070511:CDS 30.0%
AACACTTGGATTAACTGAAT+TGG + chr5.4:67640639-67640658 MS.gene070511:CDS 30.0%
AAGGAATGTTAGTAGTGAAA+AGG + chr5.4:67637200-67637219 MS.gene070511:CDS 30.0%
ACAATTCAAAGGGACAAATT+AGG + chr5.4:67638739-67638758 MS.gene070511:CDS 30.0%
ACTACTAACATTCCTTGATA+CGG - chr5.4:67637196-67637215 None:intergenic 30.0%
AGAAAGAGTGAAACTTGATT+TGG + chr5.4:67639053-67639072 MS.gene070511:CDS 30.0%
AGAAGCCTAAGACAAATTTA+CGG - chr5.4:67638507-67638526 None:intergenic 30.0%
AGCATGATATAAAAAGGGAA+TGG + chr5.4:67637574-67637593 MS.gene070511:CDS 30.0%
AGTGAATGTGTTATAACCTT+TGG - chr5.4:67638129-67638148 None:intergenic 30.0%
ATTAGCCGTAAATTTGTCTT+AGG + chr5.4:67638499-67638518 MS.gene070511:intron 30.0%
ATTCAATGGACAAACATGAA+AGG + chr5.4:67638641-67638660 MS.gene070511:CDS 30.0%
ATTGTCAAATTGGCAACATT+TGG - chr5.4:67637271-67637290 None:intergenic 30.0%
CAAAAAGAAGACAATGTTGA+AGG + chr5.4:67640325-67640344 MS.gene070511:CDS 30.0%
CAAATTATCATTGTTAGGCA+GGG + chr5.4:67638061-67638080 MS.gene070511:intron 30.0%
CCATGCAAATTATCATTGTT+AGG + chr5.4:67638056-67638075 MS.gene070511:intron 30.0%
CCTAAAAGTAAACACTTTAG+AGG - chr5.4:67639324-67639343 None:intergenic 30.0%
CTGTCCAATATTAGTATAAC+TGG - chr5.4:67637556-67637575 None:intergenic 30.0%
GCTTAATGAAGCATATCAAT+TGG + chr5.4:67637302-67637321 MS.gene070511:CDS 30.0%
GTATGATGAAGAGTCAAATA+TGG + chr5.4:67637632-67637651 MS.gene070511:CDS 30.0%
TACAAAACTGAAGATTTGTC+TGG + chr5.4:67637774-67637793 MS.gene070511:CDS 30.0%
TACTAGAAAACAAGCCAAAT+TGG + chr5.4:67638614-67638633 MS.gene070511:CDS 30.0%
TGATGAAGATAATGAAAGCA+TGG - chr5.4:67640570-67640589 None:intergenic 30.0%
TGGACAGCATGATATAAAAA+GGG + chr5.4:67637569-67637588 MS.gene070511:CDS 30.0%
TGGAGTTTCAACAAATTTGT+TGG + chr5.4:67637329-67637348 MS.gene070511:CDS 30.0%
TTGGACAGCATGATATAAAA+AGG + chr5.4:67637568-67637587 MS.gene070511:CDS 30.0%
TTGTCAAATTGGCAACATTT+GGG - chr5.4:67637270-67637289 None:intergenic 30.0%
TTTCATGTTTGTCCATTGAA+TGG - chr5.4:67638642-67638661 None:intergenic 30.0%
! CCTAACAATGATAATTTGCA+TGG - chr5.4:67638059-67638078 None:intergenic 30.0%
! CTTCAACATTGTCTTCTTTT+TGG - chr5.4:67640327-67640346 None:intergenic 30.0%
! GCAAAAAATAATTTTCCCTC+TGG - chr5.4:67637153-67637172 None:intergenic 30.0%
! GCTAATAGCTTTTTAACAGT+TGG - chr5.4:67637534-67637553 None:intergenic 30.0%
! TCTTCATCAGATACTGTTTT+TGG - chr5.4:67640232-67640251 None:intergenic 30.0%
!! CTTAACTAGGGTTTTATCAT+TGG + chr5.4:67639644-67639663 MS.gene070511:intron 30.0%
!! GAAGGTGTTGAATTATTACT+TGG + chr5.4:67638700-67638719 MS.gene070511:CDS 30.0%
!! TGATAAATCATCTTTGAGAC+AGG + chr5.4:67639128-67639147 MS.gene070511:CDS 30.0%
!!! CCTCTAAAGTGTTTACTTTT+AGG + chr5.4:67639321-67639340 MS.gene070511:intron 30.0%
AAAAACGAAGACCATCTTGA+AGG + chr5.4:67640253-67640272 MS.gene070511:CDS 35.0%
AACAGAAATTGAGACTCCTA+TGG + chr5.4:67637365-67637384 MS.gene070511:CDS 35.0%
AAGCAGTCACAAATAGCATA+AGG + chr5.4:67638418-67638437 MS.gene070511:intron 35.0%
AATGTTTGCAGCATCTTACA+TGG + chr5.4:67640134-67640153 MS.gene070511:intron 35.0%
ACTAAGTAGTACACAGTTGT+AGG - chr5.4:67639021-67639040 None:intergenic 35.0%
ACTCTTCATCATACTCTTCT+GGG - chr5.4:67637626-67637645 None:intergenic 35.0%
ACTGAAAGTAAACCTGATCA+AGG + chr5.4:67640913-67640932 MS.gene070511:CDS 35.0%
AGATTTGTCTGGATACTCAT+TGG + chr5.4:67637785-67637804 MS.gene070511:CDS 35.0%
CAAATGCTGCACAATTCAAA+GGG + chr5.4:67638729-67638748 MS.gene070511:CDS 35.0%
CACAAGTACCCTAATAGTAT+GGG - chr5.4:67638546-67638565 None:intergenic 35.0%
CAGAATCAAGGTATGTAAGT+TGG + chr5.4:67637981-67638000 MS.gene070511:intron 35.0%
CATACGATGCTAGATGAATT+GGG - chr5.4:67638771-67638790 None:intergenic 35.0%
CGCTCTCATTTCATTATCTT+TGG + chr5.4:67640702-67640721 MS.gene070511:CDS 35.0%
CGTGATGCCAAAAAAAGATA+AGG - chr5.4:67640892-67640911 None:intergenic 35.0%
CTTCACATTGCATCAAACTA+TGG + chr5.4:67638877-67638896 MS.gene070511:CDS 35.0%
CTTCCACGATCACAAAATTA+TGG + chr5.4:67639908-67639927 MS.gene070511:intron 35.0%
CTTTGTGCATGTAGTTTCTT+TGG - chr5.4:67638448-67638467 None:intergenic 35.0%
GAAAACAGTACTTTACCTTG+CGG + chr5.4:67637854-67637873 MS.gene070511:CDS 35.0%
GAATGTGTTATAACCTTTGG+AGG - chr5.4:67638126-67638145 None:intergenic 35.0%
GCAAATTATCATTGTTAGGC+AGG + chr5.4:67638060-67638079 MS.gene070511:intron 35.0%
GCATAAGACGATTGTATTGT+TGG - chr5.4:67638104-67638123 None:intergenic 35.0%
GTGTACTACTTAGTTAACCA+AGG + chr5.4:67639027-67639046 MS.gene070511:CDS 35.0%
TAATGAGAAATGTACCGCAA+TGG - chr5.4:67640868-67640887 None:intergenic 35.0%
TATTTGTGACTGCTTGTTTG+TGG - chr5.4:67638413-67638432 None:intergenic 35.0%
TCACAAGTACCCTAATAGTA+TGG - chr5.4:67638547-67638566 None:intergenic 35.0%
TCCATTGAATGGATCCAATT+TGG - chr5.4:67638631-67638650 None:intergenic 35.0%
TGAACCTGAATCACTTTGTT+GGG - chr5.4:67640281-67640300 None:intergenic 35.0%
TGAATCTGAATCACTTGGTT+TGG - chr5.4:67640209-67640228 None:intergenic 35.0%
TGATGAAGAGTCAAATATGG+AGG + chr5.4:67637635-67637654 MS.gene070511:CDS 35.0%
TGTGGCTGAAAAATAGAAAG+TGG - chr5.4:67639428-67639447 None:intergenic 35.0%
TTCATGATTGCTGCTACAAT+GGG - chr5.4:67637960-67637979 None:intergenic 35.0%
TTTGGTGAATCTGAATCACT+TGG - chr5.4:67640214-67640233 None:intergenic 35.0%
! AAAATTGTTATGCCGCTTCT+TGG + chr5.4:67640676-67640695 MS.gene070511:CDS 35.0%
! AATAATTTTCCCTCTGGATG+AGG - chr5.4:67637147-67637166 None:intergenic 35.0%
! GAAGCATATCAATTGGTCTA+TGG + chr5.4:67637309-67637328 MS.gene070511:CDS 35.0%
! GCTATTCTCCAAGATTAGTT+TGG - chr5.4:67637904-67637923 None:intergenic 35.0%
! TAGGGTACTTGTGACAAAAT+GGG + chr5.4:67638553-67638572 MS.gene070511:intron 35.0%
! TGACCATAATTTTGTGATCG+TGG - chr5.4:67639914-67639933 None:intergenic 35.0%
! TGCTACCATCATACTCTTTT+GGG + chr5.4:67640615-67640634 MS.gene070511:CDS 35.0%
! TTAGGGTACTTGTGACAAAA+TGG + chr5.4:67638552-67638571 MS.gene070511:intron 35.0%
!! GGACTTGTTAGAATTTGTGA+CGG + chr5.4:67637656-67637675 MS.gene070511:CDS 35.0%
!! GTTGTTACTCTGCTTTTGTT+CGG - chr5.4:67640398-67640417 None:intergenic 35.0%
!!! TTATCTTTGGCTTTTATGGC+TGG + chr5.4:67640715-67640734 MS.gene070511:CDS 35.0%
AAAGCAAAGTCCAAGAAGAG+TGG + chr5.4:67640180-67640199 MS.gene070511:CDS 40.0%
ACTTCTTCACTACTTCCACA+TGG - chr5.4:67638798-67638817 None:intergenic 40.0%
AGGCAACACTATGTTACATG+AGG + chr5.4:67637692-67637711 MS.gene070511:CDS 40.0%
AGTAGTACACAGTTGTAGGA+TGG - chr5.4:67639017-67639036 None:intergenic 40.0%
ATTATCATTGTTAGGCAGGG+CGG + chr5.4:67638064-67638083 MS.gene070511:intron 40.0%
ATTCATCTAGCATCGTATGG+AGG + chr5.4:67638772-67638791 MS.gene070511:CDS 40.0%
CAAGGATTAACACCTTGATC+AGG - chr5.4:67640928-67640947 None:intergenic 40.0%
CAGTTATCAGTGAACTCAGT+TGG + chr5.4:67640746-67640765 MS.gene070511:CDS 40.0%
CCAATTCATCTAGCATCGTA+TGG + chr5.4:67638769-67638788 MS.gene070511:CDS 40.0%
CCATACGATGCTAGATGAAT+TGG - chr5.4:67638772-67638791 None:intergenic 40.0%
CTACATATTGCAGCTTGGTA+TGG + chr5.4:67637399-67637418 MS.gene070511:CDS 40.0%
CTATTTGCCACAATTCAAGG+AGG - chr5.4:67639451-67639470 None:intergenic 40.0%
CTTCATGATTGCTGCTACAA+TGG - chr5.4:67637961-67637980 None:intergenic 40.0%
CTTTACCTTGCGGTTGAAAA+TGG + chr5.4:67637864-67637883 MS.gene070511:CDS 40.0%
GACTCTTCATCATACTCTTC+TGG - chr5.4:67637627-67637646 None:intergenic 40.0%
GAGTATGATGGTAGCACTAA+TGG - chr5.4:67640611-67640630 None:intergenic 40.0%
GCAAATGCTGCACAATTCAA+AGG + chr5.4:67638728-67638747 MS.gene070511:CDS 40.0%
GCAATCATGAAGCAGAATCA+AGG + chr5.4:67637969-67637988 MS.gene070511:CDS 40.0%
GCACTATTTGCCACAATTCA+AGG - chr5.4:67639454-67639473 None:intergenic 40.0%
GCATCTACAGGTTATCTTGA+AGG + chr5.4:67638682-67638701 MS.gene070511:CDS 40.0%
GCCAAATTGGATCCATTCAA+TGG + chr5.4:67638627-67638646 MS.gene070511:CDS 40.0%
GGCAAATAGTGCATTGTGAT+TGG + chr5.4:67639462-67639481 MS.gene070511:intron 40.0%
GTGAACCTGAATCACTTTGT+TGG - chr5.4:67640282-67640301 None:intergenic 40.0%
GTTTCACTCTTTCTTTGCCT+TGG - chr5.4:67639047-67639066 None:intergenic 40.0%
TATCAGTGAACTCAGTTGGT+TGG + chr5.4:67640750-67640769 MS.gene070511:CDS 40.0%
TCCTTCCATCATCATCTACT+AGG + chr5.4:67640839-67640858 MS.gene070511:CDS 40.0%
TGACAAGAGCAATATGAGCA+GGG + chr5.4:67637725-67637744 MS.gene070511:CDS 40.0%
TTTGTTGGGATCCTTCAAGA+TGG - chr5.4:67640267-67640286 None:intergenic 40.0%
! ATACTCTTTTGGGCAACACT+TGG + chr5.4:67640625-67640644 MS.gene070511:CDS 40.0%
! CTGATCAAGGTGTTAATCCT+TGG + chr5.4:67640926-67640945 MS.gene070511:CDS 40.0%
! GAATTTGTGACGGAGAAGAA+TGG + chr5.4:67637666-67637685 MS.gene070511:CDS 40.0%
! GAGCAGGGATATGATTTTCA+AGG + chr5.4:67637740-67637759 MS.gene070511:CDS 40.0%
! GTGCTACCATCATACTCTTT+TGG + chr5.4:67640614-67640633 MS.gene070511:CDS 40.0%
! TGTAGCACTGTGTTTTCCAT+AGG - chr5.4:67637384-67637403 None:intergenic 40.0%
! TGTGCTGACCCATACTATTA+GGG + chr5.4:67638535-67638554 MS.gene070511:intron 40.0%
! TGTTGCCCAAAAGAGTATGA+TGG - chr5.4:67640623-67640642 None:intergenic 40.0%
! TTGTGCTGACCCATACTATT+AGG + chr5.4:67638534-67638553 MS.gene070511:intron 40.0%
!! ACTCTGCTTTTGTTCGGTTT+TGG - chr5.4:67640392-67640411 None:intergenic 40.0%
!! CAAGAGCTGTTTCGTTGTTT+TGG - chr5.4:67639083-67639102 None:intergenic 40.0%
!! GAGGGTTCAATTTCAAGTTC+AGG - chr5.4:67637228-67637247 None:intergenic 40.0%
!! TCCTAGTAGATGATGATGGA+AGG - chr5.4:67640843-67640862 None:intergenic 40.0%
!!! GTATTGTTGGCCTTACCTTT+TGG - chr5.4:67638091-67638110 None:intergenic 40.0%
!!! TATGGCGCTGATTTTTGTTG+TGG + chr5.4:67640789-67640808 MS.gene070511:CDS 40.0%
AAGAAGGATGCTAAGCCGAA+GGG + chr5.4:67637927-67637946 MS.gene070511:CDS 45.0%
AATGACGTCAGTGACTTCTG+AGG - chr5.4:67637247-67637266 None:intergenic 45.0%
ACAATGGGCGATAATCCCTT+CGG - chr5.4:67637945-67637964 None:intergenic 45.0%
AGGTGACACTCCTTTGCATT+TGG + chr5.4:67638978-67638997 MS.gene070511:CDS 45.0%
ATGACGTCAGTGACTTCTGA+GGG - chr5.4:67637246-67637265 None:intergenic 45.0%
ATGAGAGCGATTCCAAGAAG+CGG - chr5.4:67640691-67640710 None:intergenic 45.0%
CAATCGTCTTATGCCTCCAA+AGG + chr5.4:67638110-67638129 MS.gene070511:intron 45.0%
CAGTGCTACATATTGCAGCT+TGG + chr5.4:67637394-67637413 MS.gene070511:CDS 45.0%
CATCTACTAGGAAGCCATTG+CGG + chr5.4:67640851-67640870 MS.gene070511:CDS 45.0%
CGCCATAACCAGAAACACAT+TGG - chr5.4:67640776-67640795 None:intergenic 45.0%
CTTCATTACGCAGCATCTAC+AGG + chr5.4:67638670-67638689 MS.gene070511:CDS 45.0%
CTTGGAGAATAGCCCTAAGA+AGG + chr5.4:67637911-67637930 MS.gene070511:CDS 45.0%
GATACGGCTTCATCTTGCAA+TGG - chr5.4:67637180-67637199 None:intergenic 45.0%
GATCTTGCAGCCAAATGCAA+AGG - chr5.4:67638991-67639010 None:intergenic 45.0%
GCATTACATGTTGCTGCAAG+AGG + chr5.4:67637498-67637517 MS.gene070511:CDS 45.0%
GGATCCCAACAAAGTGATTC+AGG + chr5.4:67640274-67640293 MS.gene070511:CDS 45.0%
GGATGCTGCCAAACTAATCT+TGG + chr5.4:67637893-67637912 MS.gene070511:CDS 45.0%
GGCTTCCTAGTAGATGATGA+TGG - chr5.4:67640847-67640866 None:intergenic 45.0%
GTAGATGCTGCGTAATGAAG+AGG - chr5.4:67638670-67638689 None:intergenic 45.0%
GTGACAAGAGCAATATGAGC+AGG + chr5.4:67637724-67637743 MS.gene070511:CDS 45.0%
TAAGAAGGATGCTAAGCCGA+AGG + chr5.4:67637926-67637945 MS.gene070511:CDS 45.0%
TCGGCTTAGCATCCTTCTTA+GGG - chr5.4:67637926-67637945 None:intergenic 45.0%
TGCAAGATGAAGCCGTATCA+AGG + chr5.4:67637181-67637200 MS.gene070511:CDS 45.0%
TGCGGTTGAAAATGGAGACA+AGG + chr5.4:67637872-67637891 MS.gene070511:CDS 45.0%
TGGACTGCACTTAAATCTGC+TGG + chr5.4:67640154-67640173 MS.gene070511:CDS 45.0%
TTACATGTTGCTGCAAGAGG+TGG + chr5.4:67637501-67637520 MS.gene070511:CDS 45.0%
TTCGGCTTAGCATCCTTCTT+AGG - chr5.4:67637927-67637946 None:intergenic 45.0%
! GAAGTGTCAAGCATCTCTGT+GGG - chr5.4:67638841-67638860 None:intergenic 45.0%
! TGTCTCCATTTTCAACCGCA+AGG - chr5.4:67637872-67637891 None:intergenic 45.0%
! TTGGTTGGCCAATGTGTTTC+TGG + chr5.4:67640765-67640784 MS.gene070511:CDS 45.0%
!! AGAAGTGTCAAGCATCTCTG+TGG - chr5.4:67638842-67638861 None:intergenic 45.0%
!! GGCCAATGTGTTTCTGGTTA+TGG + chr5.4:67640771-67640790 MS.gene070511:CDS 45.0%
!!! ATTAAAAAAGTTTAATTTTA+GGG + chr5.4:67639287-67639306 MS.gene070511:intron 5.0%
AGCCACACCTCCTTGAATTG+TGG + chr5.4:67639441-67639460 MS.gene070511:intron 50.0%
GCAGCATGTTTAGCTGTTCC+AGG + chr5.4:67640502-67640521 MS.gene070511:CDS 50.0%
GGTTTGGATGCCACTCTTCT+TGG - chr5.4:67640193-67640212 None:intergenic 50.0%
TCAAGCATCTCTGTGGGATC+AGG - chr5.4:67638835-67638854 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - chr5.4:67639446-67639465 None:intergenic 50.0%
! GCTTTTCCTTCTGCTTCACC+TGG - chr5.4:67640523-67640542 None:intergenic 50.0%
! GTGACGGAGAAGAATGGTCA+AGG + chr5.4:67637672-67637691 MS.gene070511:CDS 50.0%
AGCATCGTATGGAGGCCATG+TGG + chr5.4:67638780-67638799 MS.gene070511:CDS 55.0%
GCTGTTCCAGGTGAAGCAGA+AGG + chr5.4:67640514-67640533 MS.gene070511:CDS 55.0%
GCAGGGCGGTCCAAAAGGTA+AGG + chr5.4:67638078-67638097 MS.gene070511:intron 60.0%
GTTAGGCAGGGCGGTCCAAA+AGG + chr5.4:67638073-67638092 MS.gene070511:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 67637141 67640954 67637141 ID=MS.gene070511
chr5.4 mRNA 67637141 67640954 67637141 ID=MS.gene070511.t1;Parent=MS.gene070511
chr5.4 exon 67637141 67637990 67637141 ID=MS.gene070511.t1.exon1;Parent=MS.gene070511.t1
chr5.4 CDS 67637141 67637990 67637141 ID=cds.MS.gene070511.t1;Parent=MS.gene070511.t1
chr5.4 exon 67638599 67639149 67638599 ID=MS.gene070511.t1.exon2;Parent=MS.gene070511.t1
chr5.4 CDS 67638599 67639149 67638599 ID=cds.MS.gene070511.t1;Parent=MS.gene070511.t1
chr5.4 exon 67640145 67640954 67640145 ID=MS.gene070511.t1.exon3;Parent=MS.gene070511.t1
chr5.4 CDS 67640145 67640954 67640145 ID=cds.MS.gene070511.t1;Parent=MS.gene070511.t1
Gene Sequence

>MS.gene070511

ATGCCTCATCCAGAGGGAAAATTATTTTTTGCTGAACCATTGCAAGATGAAGCCGTATCAAGGAATGTTAGTAGTGAAAAGGAGCCTGAACTTGAAATTGAACCCTCAGAAGTCACTGACGTCATTCCCAAATGTTGCCAATTTGACAATCAAATTAATTTGCTTAATGAAGCATATCAATTGGTCTATGGAGTTTCAACAAATTTGTTGGATTTCTCTAATTTAACAGAAATTGAGACTCCTATGGAAAACACAGTGCTACATATTGCAGCTTGGTATGGTAATAATGACATTGTGAATCTTGTAATTCAACATGCTCCAAAACTTTTGTTCAAATTTAACAAAAATTATGATAGTGCATTACATGTTGCTGCAAGAGGTGGACACATCCCAACTGTTAAAAAGCTATTAGCCAGTTATACTAATATTGGACAGCATGATATAAAAAGGGAATGGTTAGAATACACTAAAAATAATGGTGACCCAGAAGAGTATGATGAAGAGTCAAATATGGAGGACTTGTTAGAATTTGTGACGGAGAAGAATGGTCAAGGCAACACTATGTTACATGAGGCAATGTTAAGTGACAAGAGCAATATGAGCAGGGATATGATTTTCAAGGTTTGTGAACTTTACAAAACTGAAGATTTGTCTGGATACTCATTGGCAAATTCTTGTTATAAATTTGCGTTAGATATTATTAATCATGCAAAGAAAACAGTACTTTACCTTGCGGTTGAAAATGGAGACAAGGATGCTGCCAAACTAATCTTGGAGAATAGCCCTAAGAAGGATGCTAAGCCGAAGGGATTATCGCCCATTGTAGCAGCAATCATGAAGCAGAATCAAGGTATGTAAGTTGGTCATAATATTGTTGTTCAATCACTTGAATGATAACACTATGAGTAAATTATACCATGCAAATTATCATTGTTAGGCAGGGCGGTCCAAAAGGTAAGGCCAACAATACAATCGTCTTATGCCTCCAAAGGTTATAACACATTCACTTAATATTTTTATATCGTCTAATGTTATTAGTCTCATGTTCTACTATTTTCGAAATTAATATTGTCTAGATAAAGATTGAATTTCTTGATTTTATTATCAATTAATGGAGAAATATTCTTGACCAAAAAAAAAAATAGAGAAATATTAAACAAAATTGATAGCATCATAATGTAATTAATGATTTTATATTCTAGGAAATTTTGAAAAACAAATTATTTCAAGAAAAAAAAAAATTAACAAGCCAAAATGGAATATATATCACCACAAACAAGCAGTCACAAATAGCATAAGGTGTGCCAAAGAAACTACATGCACAAAGTCAGTCTGTCAAAGCCAAAAACAACAAAACAATTAGCCGTAAATTTGTCTTAGGCTTCTATATTTGTTGTGCTGACCCATACTATTAGGGTACTTGTGACAAAATGGGTAATATTTATGTTTGTGTGTCAGAACTGCTCAATACAATACTAGAAAACAAGCCAAATTGGATCCATTCAATGGACAAACATGAAAGGCTTCCTCTTCATTACGCAGCATCTACAGGTTATCTTGAAGGTGTTGAATTATTACTTGGCAAATGCAAATGCTGCACAATTCAAAGGGACAAATTAGGTTATTTCCCAATTCATCTAGCATCGTATGGAGGCCATGTGGAAGTAGTGAAGAAGTTGTTAGAATATTGTCCTGATCCCACAGAGATGCTTGACACTTCTCATGAACGTAATATTCTTCACATTGCATCAAACTATGGAAAATATGAGGTGGTGCAATACATTCTACAAAGTCAAAGTAGTGAACATTATAAGATGATAAATCAAAAAGATAACAAAGGTGACACTCCTTTGCATTTGGCTGCAAGATCATGCCATCCTACAACTGTGTACTACTTAGTTAACCAAGGCAAAGAAAGAGTGAAACTTGATTTGGTTAACCAAAACAACGAAACAGCTCTTGACATTGTTAGTGCACTTTTTGAGCTTGATAAATCATCTTTGAGACAGGCAAGTAGTTCTATTCTCTCAGAAACTTGCAAATTTATAACTAAGTTTACTGTATAGTTTTTTCTTTTATATAAGTAGATTAAATGAATGGCTAAACATCAATTTATTAATAGTGTATGTATGAGAATACATTATTGATTAAAAAAGTTTAATTTTAGGGAGATGTTATGACCTCTAAAGTGTTTACTTTTAGGAAAATGCTACTTTTCAAGAAAAATAGCTTCAAGAATTTTTCAAGACACAATTGGCAAATTTTAATTGGATGATTAATTTGTCCACTTTCTATTTTTCAGCCACACCTCCTTGAATTGTGGCAAATAGTGCATTGTGATTGGCTATTCTTTATTCTTGAAGAATTCTTGATGTTATTTTTCTAGAGATATAGCATTGCTCTTAATTTTAAATGAATGGCTAAACATCAATTTATTAATAGTGTATGCATGAGAATACATTATTAATAGTGTATGCATGAGAATACATTATTGATTAAAGAACTTAACTAGGGTTTTATCATTGGAATAAAAATCAGTTGAAGTTTTTAAATTTTATGTGACATCTTTGCTCGACATAAAACAAGTTAAGAACACAATAAAAATTTAATTCAAATTTGTTAGTGTCAAAACAGCAAATCACCTGCCATATTATATCATTCTAACCCTAAATTTACTAGTGTATAGAGAATGTTTGACATTTATAAATTTAAGAGAATAAAATTATAGATTTTTAAATGACAAAAATTAAAAGTCTATGGAGCAAGTCTTCCACGATCACAAAATTATGGTCACAACTCTAGAGCGCACACACAAAATAACAAAATGTAATTTTTTTTTTTTAATTATTTTTAAAAATATTTAAAAGAAACAAGGTAGCTAGAATAAATATTTTGTGAGTGTGCCTAAGAGATTTATATTGAACTTGTAACCATATAAGAGTAATCCTAATTTGCATCTATTTTTTGTTTCTTTTATGACACATAGCTTTAACAATGTTTGCAGCATCTTACATGGACTGCACTTAAATCTGCTGGTGCAAAGCAAAGTCCAAGAAGAGTGGCATCCAAACCAAGTGATTCAGATTCACCAAAAACAGTATCTGATGAAGACAAAAACGAAGACCATCTTGAAGGATCCCAACAAAGTGATTCAGGTTCACCAAAATCAGAATCAGATAAAGACCAAAAAGAAGACAATGTTGAAGGATCTCAACAAAGTGAAACAAAACAAAGAAATGAAAAGTCAACCAAAACCGAACAAAAGCAGAGTAACAACGAAAAAGAAAAAGTATCTGAAAGATATAAAGACAGAATAGAAAACCTTACAATTGTTTCAACACTTATAATCACTGCATCAGTAGCAGCATGTTTAGCTGTTCCAGGTGAAGCAGAAGGAAAAGCACACAACTTACGTCATGCAATGTTCCATGCTTTCATTATCTTCATCACAATATCATTGTTCAGTTCCATTAGTGCTACCATCATACTCTTTTGGGCAACACTTGGATTAACTGAATTGGTAACTTTTACTCTCAAAATTGTTATGCCGCTTCTTGGAATCGCTCTCATTTCATTATCTTTGGCTTTTATGGCTGGTCTCTACACAGTTATCAGTGAACTCAGTTGGTTGGCCAATGTGTTTCTGGTTATGGCGCTGATTTTTGTTGTGGTTGTGATTTTGTTATATATGCTTCTTTTCCTTCCATCATCATCTACTAGGAAGCCATTGCGGTACATTTCTCATTATCCTTATCTTTTTTTGGCATCACGAACTGAAAGTAAACCTGATCAAGGTGTTAATCCTTGGTCTTAG
Protein sequence

>MS.gene070511.t1

MPHPEGKLFFAEPLQDEAVSRNVSSEKEPELEIEPSEVTDVIPKCCQFDNQINLLNEAYQLVYGVSTNLLDFSNLTEIETPMENTVLHIAAWYGNNDIVNLVIQHAPKLLFKFNKNYDSALHVAARGGHIPTVKKLLASYTNIGQHDIKREWLEYTKNNGDPEEYDEESNMEDLLEFVTEKNGQGNTMLHEAMLSDKSNMSRDMIFKVCELYKTEDLSGYSLANSCYKFALDIINHAKKTVLYLAVENGDKDAAKLILENSPKKDAKPKGLSPIVAAIMKQNQELLNTILENKPNWIHSMDKHERLPLHYAASTGYLEGVELLLGKCKCCTIQRDKLGYFPIHLASYGGHVEVVKKLLEYCPDPTEMLDTSHERNILHIASNYGKYEVVQYILQSQSSEHYKMINQKDNKGDTPLHLAARSCHPTTVYYLVNQGKERVKLDLVNQNNETALDIVSALFELDKSSLRQHLTWTALKSAGAKQSPRRVASKPSDSDSPKTVSDEDKNEDHLEGSQQSDSGSPKSESDKDQKEDNVEGSQQSETKQRNEKSTKTEQKQSNNEKEKVSERYKDRIENLTIVSTLIITASVAACLAVPGEAEGKAHNLRHAMFHAFIIFITISLFSSISATIILFWATLGLTELVTFTLKIVMPLLGIALISLSLAFMAGLYTVISELSWLANVFLVMALIFVVVVILLYMLLFLPSSSTRKPLRYISHYPYLFLASRTESKPDQGVNPWS