AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002741

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002741.t1 MTR_2g019530 96.927 781 22 2 1 780 1 780 0.0 1567
MS.gene002741.t1 MTR_8g446430 57.381 779 247 7 1 779 1 694 0.0 865
MS.gene002741.t1 MTR_4g113530 62.218 487 179 3 16 500 11 494 0.0 622
MS.gene002741.t1 MTR_4g113530 25.914 301 172 9 511 772 582 870 1.16e-13 75.5
MS.gene002741.t1 MTR_2g006870 41.396 831 391 17 16 776 25 829 0.0 578
MS.gene002741.t1 MTR_1g011755 40.047 844 382 21 24 770 21 837 0.0 556
MS.gene002741.t1 MTR_3g107720 52.092 478 220 5 34 506 47 520 5.60e-166 502
MS.gene002741.t1 MTR_3g107720 57.143 70 22 3 702 770 820 882 3.16e-12 70.9
MS.gene002741.t1 MTR_3g108320 47.529 526 270 5 29 549 21 545 1.59e-158 474
MS.gene002741.t1 MTR_3g108320 50.313 479 233 4 29 503 21 498 1.98e-158 472
MS.gene002741.t1 MTR_3g108320 50.313 479 233 4 29 503 21 498 2.40e-158 471
MS.gene002741.t1 MTR_8g046440 72.982 285 76 1 223 507 11 294 2.53e-150 442
MS.gene002741.t1 MTR_5g077770 35.174 489 303 6 16 495 46 529 2.98e-94 313
MS.gene002741.t1 MTR_1g040590 31.010 287 180 4 183 466 11 282 3.09e-37 141
MS.gene002741.t1 MTR_4g113370 30.508 236 157 3 273 504 5 237 1.68e-30 120
MS.gene002741.t1 MTR_0279s0030 31.474 251 158 5 50 299 2 239 2.40e-26 112
MS.gene002741.t1 MTR_4g113390 33.493 209 131 5 48 251 16 221 7.24e-22 95.5
MS.gene002741.t1 MTR_4g020720 56.338 71 29 2 430 500 12 80 1.15e-14 75.5
MS.gene002741.t1 MTR_0279s0030 32.558 129 82 2 171 299 51 174 2.71e-12 68.9
MS.gene002741.t1 MTR_4g113290 25.214 234 107 8 69 299 1 169 4.24e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002741.t1 AT5G46240 71.571 503 142 1 1 503 1 502 0.0 788
MS.gene002741.t1 AT5G46240 50.538 93 37 2 681 770 588 674 1.21e-17 88.2
MS.gene002741.t1 AT4G18290 65.324 571 190 3 1 564 12 581 0.0 771
MS.gene002741.t1 AT4G18290 65.324 571 190 3 1 564 1 570 0.0 770
MS.gene002741.t1 AT4G32500 44.070 860 353 21 21 771 37 877 0.0 642
MS.gene002741.t1 AT2G25600 42.526 863 349 17 29 770 48 884 0.0 632
MS.gene002741.t1 AT2G26650 61.680 488 178 4 16 500 13 494 0.0 621
MS.gene002741.t1 AT2G26650 29.046 241 131 11 554 768 625 851 3.52e-13 73.9
MS.gene002741.t1 AT4G22200 40.886 790 393 21 29 775 43 801 0.0 548
MS.gene002741.t1 AT2G26650 63.544 395 136 3 108 500 1 389 1.24e-172 515
MS.gene002741.t1 AT2G26650 28.926 242 132 11 554 769 520 747 4.62e-13 73.6
MS.gene002741.t1 AT4G22200 51.975 481 225 5 29 505 43 521 4.64e-172 508
MS.gene002741.t1 AT4G32650 42.626 617 326 11 29 630 55 658 8.26e-141 430
MS.gene002741.t1 AT4G32650 49.372 478 231 6 29 499 55 528 3.55e-140 426
MS.gene002741.t1 AT4G32650 49.372 478 231 6 29 499 55 528 5.16e-140 428
MS.gene002741.t1 AT3G02850 30.390 770 473 19 48 770 71 824 6.83e-104 338
MS.gene002741.t1 AT3G02850 36.383 470 278 8 48 502 71 534 7.38e-99 318
MS.gene002741.t1 AT3G02850 33.953 592 338 15 48 624 71 624 8.83e-98 320
MS.gene002741.t1 AT5G37500 29.253 776 491 22 49 777 55 819 2.01e-97 321
MS.gene002741.t1 AT5G37500 36.481 466 278 8 49 505 55 511 3.27e-92 304
MS.gene002741.t1 AT5G37500 36.481 466 278 8 49 505 55 511 1.93e-91 305
MS.gene002741.t1 AT5G37500 35.965 456 274 8 59 505 11 457 6.32e-88 295
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 131 553 6.20e-14 76.3
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 158 580 6.49e-14 76.3
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 158 580 6.49e-14 76.3
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 158 580 6.49e-14 76.3
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 158 580 6.49e-14 76.3
MS.gene002741.t1 AT2G23980 19.676 432 257 10 94 444 158 580 6.49e-14 76.3

Find 146 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGACTTTGTTCTTTAAAATT+TGG 0.068175 2.1:-67619290 None:intergenic
TGAAAGTACTTACAAAATTT+TGG 0.084247 2.1:-67619502 None:intergenic
ACCGTCCTGTTTACTGTTTC+GGG 0.161405 2.1:-67621380 None:intergenic
TTCTTAACATGTTGCGATTA+TGG 0.172049 2.1:+67618882 MS.gene002741:CDS
TGTGTCCACCCTATGGTATT+TGG 0.174885 2.1:-67621223 None:intergenic
GACATTTATGTACTGGTTTC+AGG 0.188389 2.1:+67620314 MS.gene002741:CDS
TCCTCAGGTATCATGTTATT+AGG 0.219587 2.1:-67621103 None:intergenic
AGCACCTATCCAAGTTCTTT+TGG 0.225780 2.1:-67619261 None:intergenic
TACCGTCCTGTTTACTGTTT+CGG 0.226231 2.1:-67621381 None:intergenic
ATATCTTAATTACCATTAAA+AGG 0.234087 2.1:-67620766 None:intergenic
GTTCTCTCCTTCATGCATTA+AGG 0.253490 2.1:-67621020 None:intergenic
GACTTTGTTCTTTAAAATTT+GGG 0.262231 2.1:-67619289 None:intergenic
GGTGATCATCTCTTTCTTAT+TGG 0.265317 2.1:+67621942 MS.gene002741:CDS
TTGCCTGTAAAACATTCATT+AGG 0.266733 2.1:-67620712 None:intergenic
AAAACTTCTTCCAGAGGTTC+TGG 0.278730 2.1:+67618231 MS.gene002741:CDS
ACATTCGCTTCAATTACTTC+TGG 0.279463 2.1:+67619057 MS.gene002741:CDS
CATGTCCACCTGGTTTGTTT+TGG 0.299573 2.1:+67618784 MS.gene002741:CDS
ACAATCAAAATTTCTTGAAT+TGG 0.300844 2.1:-67621446 None:intergenic
ATGGATTGTTACCCTCTTCT+TGG 0.304577 2.1:-67621497 None:intergenic
GTGTCCACCCTATGGTATTT+GGG 0.305489 2.1:-67621222 None:intergenic
GTCTGGTTTCCTGGTTTGTT+CGG 0.314225 2.1:-67618328 None:intergenic
TGCTGTGCTGCCTGTGCATA+AGG 0.326896 2.1:+67621147 MS.gene002741:CDS
CTATATCTGACAGAGATTAA+AGG 0.329489 2.1:+67620877 MS.gene002741:intron
TGCTTTCACAATACATTGTA+TGG 0.333962 2.1:-67621288 None:intergenic
TGCAGTATCACATCTTCCTT+TGG 0.337846 2.1:-67620275 None:intergenic
ATCCTTAACTTTGGCAAGAA+TGG 0.340508 2.1:+67621352 MS.gene002741:CDS
TCTGGTTTCCTGGTTTGTTC+GGG 0.349964 2.1:-67618327 None:intergenic
AGCAGCTCTTCTAATGAATC+AGG 0.350428 2.1:-67621577 None:intergenic
CACTTACATGCTGTTCAACT+TGG 0.353116 2.1:+67619418 MS.gene002741:CDS
TTTCTGACGTATAAGCAAAA+TGG 0.358263 2.1:+67618539 MS.gene002741:CDS
GTGGAAGCATTTGGAGAGAT+TGG 0.359303 2.1:+67620611 MS.gene002741:CDS
TATAATTTATTACAGGCTTT+GGG 0.364885 2.1:+67618457 MS.gene002741:intron
TGCCTGTAAAACATTCATTA+GGG 0.373671 2.1:-67620711 None:intergenic
GCTTCAATTACTTCTGGGTT+AGG 0.376145 2.1:+67619063 MS.gene002741:CDS
CCTCAGGTATCATGTTATTA+GGG 0.384210 2.1:-67621102 None:intergenic
GAGGTTCTGGTTGGACGAAA+TGG 0.387098 2.1:+67618244 MS.gene002741:CDS
GATATCAAATAACATCTCTA+TGG 0.391859 2.1:-67619396 None:intergenic
GGTTTAACAGCATACATCAT+TGG 0.392948 2.1:+67619440 MS.gene002741:CDS
ATGCTTGACCGAATCGCCTT+TGG 0.394681 2.1:-67620018 None:intergenic
GAAGAGCTGCTCAAAATTGC+TGG 0.396916 2.1:+67621589 MS.gene002741:CDS
AGCCATTCTTGCCAAAGTTA+AGG 0.398518 2.1:-67621354 None:intergenic
CTGGTTGGACGAAATGGAAA+TGG 0.400490 2.1:+67618250 MS.gene002741:CDS
ATCACAATCTGTGCATCTCC+TGG 0.408539 2.1:-67620737 None:intergenic
TCTGTGTACACTTTCTCTAA+TGG 0.409182 2.1:-67621421 None:intergenic
CATTCGCTTCAATTACTTCT+GGG 0.411241 2.1:+67619058 MS.gene002741:CDS
CACCTATACTGAGGATTGAA+TGG 0.411860 2.1:-67618371 None:intergenic
AATCTCGTTCACTGCATTGA+TGG 0.422427 2.1:+67620449 MS.gene002741:CDS
GCAACTGCAGTGGAAGCATT+TGG 0.423214 2.1:+67620602 MS.gene002741:CDS
AATGATATAGGTTTCAGAAA+TGG 0.426448 2.1:+67620235 MS.gene002741:intron
TGTAGTGAAGAGGAGACTAA+TGG 0.426906 2.1:-67618834 None:intergenic
TTGCCAAAGTTAAGGATTTG+TGG 0.428936 2.1:-67621346 None:intergenic
ACCTATACTGAGGATTGAAT+GGG 0.438329 2.1:-67618370 None:intergenic
GATACGTAACTTCAATATAC+TGG 0.441167 2.1:+67619321 MS.gene002741:CDS
CTTGCCATTTCTATGTCACT+TGG 0.444479 2.1:-67621469 None:intergenic
TCCTACAGACATTTATGTAC+TGG 0.448321 2.1:+67620307 MS.gene002741:CDS
GTCAGAAAGGCAAACTCAAA+GGG 0.457107 2.1:-67618524 None:intergenic
GAGCCACAAATCCTTAACTT+TGG 0.459120 2.1:+67621343 MS.gene002741:CDS
TTCTAGTCATATACTCAGCT+TGG 0.460135 2.1:+67618495 MS.gene002741:CDS
GCTGTGCTGCCTGTGCATAA+GGG 0.463710 2.1:+67621148 MS.gene002741:CDS
GCTATGTTTCAGACTCGAAA+AGG 0.469567 2.1:+67619034 MS.gene002741:intron
ATAATAGACAACATTGTCAA+TGG 0.473596 2.1:+67618569 MS.gene002741:CDS
ATGATCTTCCAAAGGCGATT+CGG 0.475082 2.1:+67620010 MS.gene002741:CDS
GGAAGTCATTGGAGACTCCT+TGG 0.475455 2.1:-67620086 None:intergenic
ACTACATATGACAGTGAGCT+TGG 0.477251 2.1:+67618851 MS.gene002741:CDS
TTCTCCATCCACTTGGCGAA+TGG 0.477586 2.1:-67621516 None:intergenic
GTAGTGAAGAGGAGACTAAT+GGG 0.479207 2.1:-67618833 None:intergenic
CTCAACCCGAAACAGTAAAC+AGG 0.480735 2.1:+67621375 MS.gene002741:CDS
AGTGATCTTCTACCATCTCT+TGG 0.481192 2.1:+67618302 MS.gene002741:CDS
TTGTCCAAGTGACATAGAAA+TGG 0.483298 2.1:+67621465 MS.gene002741:CDS
GAATATCCACACACAGATCA+TGG 0.487220 2.1:+67620920 MS.gene002741:CDS
TGTTGGCACACATTTGTTTG+AGG 0.487645 2.1:+67619950 MS.gene002741:CDS
ACAGAGAACTGACTCGTCTC+AGG 0.489086 2.1:-67618907 None:intergenic
TTTCGTCCAACCAGAACCTC+TGG 0.495129 2.1:-67618241 None:intergenic
TTCCTTTGGTGGGAAATACT+CGG 0.496198 2.1:-67620261 None:intergenic
AGTATCACATCTTCCTTTGG+TGG 0.498761 2.1:-67620272 None:intergenic
AGGTAGACCTTCTGCACGAC+AGG 0.500630 2.1:-67620060 None:intergenic
CTTCTTCCAGAGGTTCTGGT+TGG 0.501625 2.1:+67618235 MS.gene002741:CDS
CCCCATTCAATCCTCAGTAT+AGG 0.503381 2.1:+67618369 MS.gene002741:CDS
GATCATCTCTTTCTTATTGG+CGG 0.505634 2.1:+67621945 MS.gene002741:CDS
ACCCTGATTCCAAAAGAACT+TGG 0.507181 2.1:+67619252 MS.gene002741:CDS
TGACTAACCTTGTAGTTCAC+TGG 0.508132 2.1:+67619468 MS.gene002741:CDS
CTCCTTCATGCATTAAGGAA+TGG 0.509079 2.1:-67621015 None:intergenic
CAATCCATTCGCCAAGTGGA+TGG 0.515545 2.1:+67621512 MS.gene002741:CDS
ATCTCGTTCACTGCATTGAT+GGG 0.518997 2.1:+67620450 MS.gene002741:CDS
TTGGTTCTATATAAATTGCT+AGG 0.520308 2.1:+67620944 MS.gene002741:CDS
TTGTTTGCAGTGCACTGTGC+AGG 0.521813 2.1:+67619200 MS.gene002741:CDS
TTTGTTCGGGCGCCAAGAGA+TGG 0.523096 2.1:-67618314 None:intergenic
ATCGTCACGCTTACTACCAC+TGG 0.523432 2.1:+67619347 MS.gene002741:CDS
CGTCAGAAAGGCAAACTCAA+AGG 0.525022 2.1:-67618525 None:intergenic
CTGTGCTGCCTGTGCATAAG+GGG 0.526246 2.1:+67621149 MS.gene002741:CDS
CACTGTCATATGTAGTGAAG+AGG 0.535760 2.1:-67618844 None:intergenic
CAGTTGGAAAAGGAAGTCAT+TGG 0.537816 2.1:-67620097 None:intergenic
ACTTACATGCTGTTCAACTT+GGG 0.543072 2.1:+67619419 MS.gene002741:CDS
TCTGTAGTTCGAACTGTGAA+AGG 0.543170 2.1:-67620656 None:intergenic
TCTAGTTTCCCCTTATGCAC+AGG 0.544175 2.1:-67621157 None:intergenic
GAGTCAGTTCTCTGTTTGCA+AGG 0.546900 2.1:+67618915 MS.gene002741:CDS
GGGGTATTACCAGTTGGAAA+AGG 0.546901 2.1:-67620107 None:intergenic
TGGTTGGACGAAATGGAAAT+GGG 0.547226 2.1:+67618251 MS.gene002741:CDS
GACATTGATGTCATTAGAGA+TGG 0.549773 2.1:+67621921 MS.gene002741:CDS
TGCACAGTGCACTGCAAACA+AGG 0.552915 2.1:-67619198 None:intergenic
ACGCTTACTACCACTGGCTA+TGG 0.553126 2.1:+67619353 MS.gene002741:CDS
GCACAGAACCCAAATACCAT+AGG 0.553388 2.1:+67621214 MS.gene002741:CDS
GAACGTAAGCACGATGTCGA+TGG 0.554490 2.1:-67618600 None:intergenic
CATGTAGTTACATGTCCACC+TGG 0.555978 2.1:+67618774 MS.gene002741:intron
TCTTGGCGCCCGAACAAACC+AGG 0.556962 2.1:+67618319 MS.gene002741:CDS
GTATCACATCTTCCTTTGGT+GGG 0.558039 2.1:-67620271 None:intergenic
TGTTTGAGGTTTAAAACAGA+AGG 0.561867 2.1:+67619964 MS.gene002741:CDS
CATTGGAGACTCCTTGGAAG+AGG 0.567411 2.1:-67620080 None:intergenic
GGCCATTCCTTAATGCATGA+AGG 0.576044 2.1:+67621013 MS.gene002741:CDS
AGGAGACTAATGGGCTCAAG+TGG 0.586925 2.1:-67618824 None:intergenic
GAGTCTACAAATAATTTACA+TGG 0.590590 2.1:+67620992 MS.gene002741:CDS
CAGAAGGTCTACCTCTTCCA+AGG 0.591913 2.1:+67620069 MS.gene002741:CDS
GCACAGGCAGCACAGCAGCA+TGG 0.592390 2.1:-67621141 None:intergenic
CACAGAACCCAAATACCATA+GGG 0.592525 2.1:+67621215 MS.gene002741:CDS
GGCAAGGTTCACCAAGAAGA+GGG 0.593694 2.1:+67621486 MS.gene002741:CDS
TCCACACACAGATCATGGAT+TGG 0.597717 2.1:+67620925 MS.gene002741:CDS
GATTCCAAAAGAACTTGGAT+AGG 0.601551 2.1:+67619257 MS.gene002741:CDS
GGATGGAGAAGTAGCTCACA+TGG 0.605702 2.1:+67621529 MS.gene002741:CDS
AGCATTAAATGATCTTCCAA+AGG 0.608942 2.1:+67620002 MS.gene002741:CDS
GAGCTACTTCTCCATCCACT+TGG 0.609891 2.1:-67621523 None:intergenic
AGCCGAGTATTTCCCACCAA+AGG 0.611493 2.1:+67620259 MS.gene002741:CDS
TGGCAAGGTTCACCAAGAAG+AGG 0.615773 2.1:+67621485 MS.gene002741:CDS
TCGCGTACACAATCAAATGT+TGG 0.618917 2.1:+67619933 MS.gene002741:CDS
CAGAGATTAAAGGAGCGTGA+AGG 0.621845 2.1:+67620887 MS.gene002741:intron
ATTTGATTGTGTACGCGACG+TGG 0.622706 2.1:-67619928 None:intergenic
TGTACTGGTTTCAGGCGCAG+TGG 0.622748 2.1:+67620322 MS.gene002741:CDS
GTTCGAACTGTGAAAGGCTG+TGG 0.623207 2.1:-67620650 None:intergenic
GACTGGTCCAGTGAACTACA+AGG 0.630276 2.1:-67619475 None:intergenic
AGTAGCTCACATGGACAGCA+CGG 0.633141 2.1:+67621538 MS.gene002741:CDS
CAAGTGACATAGAAATGGCA+AGG 0.635277 2.1:+67621470 MS.gene002741:CDS
AATAACATGATACCTGAGGA+TGG 0.636817 2.1:+67621106 MS.gene002741:CDS
ATCCAAAGAAAATTGCAACC+AGG 0.642767 2.1:+67618666 MS.gene002741:CDS
ACCAGTACATAAATGTCTGT+AGG 0.647308 2.1:-67620308 None:intergenic
GCTCTTCTAATGAATCAGGT+AGG 0.648781 2.1:-67621573 None:intergenic
GTAACAATCCATTCGCCAAG+TGG 0.651845 2.1:+67621508 MS.gene002741:CDS
CCCTAATAACATGATACCTG+AGG 0.670461 2.1:+67621102 MS.gene002741:CDS
ACCAATCCATGATCTGTGTG+TGG 0.672562 2.1:-67620926 None:intergenic
GCAGATATCCAAAACAAACC+AGG 0.680140 2.1:-67618792 None:intergenic
AGAACCCAAATACCATAGGG+TGG 0.680575 2.1:+67621218 MS.gene002741:CDS
ATGTAAATCTCCATAGCCAG+TGG 0.680944 2.1:-67619363 None:intergenic
TCAGAAAGGCAAACTCAAAG+GGG 0.689808 2.1:-67618523 None:intergenic
CCTATACTGAGGATTGAATG+GGG 0.693402 2.1:-67618369 None:intergenic
ACCCGAAACAGTAAACAGGA+CGG 0.696148 2.1:+67621379 MS.gene002741:CDS
AAAGGTCATCACCTATACTG+AGG 0.699640 2.1:-67618380 None:intergenic
GAAGAGAAGAATGACTATCG+TGG 0.704476 2.1:-67618634 None:intergenic
GATATCCAAAACAAACCAGG+TGG 0.711945 2.1:-67618789 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCATAAAAATAAAAAAG+GGG - chr2.1:67621719-67621738 None:intergenic 10.0%
!! AAATAAAATAAAAAGACATG+TGG - chr2.1:67620131-67620150 None:intergenic 15.0%
!! AATAAAATAAAAAGACATGT+GGG - chr2.1:67620130-67620149 None:intergenic 15.0%
!! AATCATAAAAATAAAAAAGG+GGG - chr2.1:67621718-67621737 None:intergenic 15.0%
!! ATATCTTAATTACCATTAAA+AGG - chr2.1:67620769-67620788 None:intergenic 15.0%
!! TATAAAATTATTATAGCATG+TGG - chr2.1:67619570-67619589 None:intergenic 15.0%
!! TTATATTTATCAATCATAGT+AGG + chr2.1:67620830-67620849 MS.gene002741:intron 15.0%
!! TTTCATGTATAATTTATTAC+AGG + chr2.1:67618450-67618469 MS.gene002741:intron 15.0%
!!! ATTTTATATTATACATGTGT+TGG + chr2.1:67619582-67619601 MS.gene002741:intron 15.0%
!!! CTCTTTATTAATTATTTTTG+TGG - chr2.1:67621886-67621905 None:intergenic 15.0%
!! ACAATCAAAATTTCTTGAAT+TGG - chr2.1:67621449-67621468 None:intergenic 20.0%
!! AGAAATTTGAAAAGTAAGTA+GGG - chr2.1:67618748-67618767 None:intergenic 20.0%
!! ATAAAATAAAAAGACATGTG+GGG - chr2.1:67620129-67620148 None:intergenic 20.0%
!! ATCATAAAAATAAAAAAGGG+GGG - chr2.1:67621717-67621736 None:intergenic 20.0%
!! TAGAAATTTGAAAAGTAAGT+AGG - chr2.1:67618749-67618768 None:intergenic 20.0%
!! TATAATTTATTACAGGCTTT+GGG + chr2.1:67618457-67618476 MS.gene002741:intron 20.0%
!! TTATATCTATATATATCACC+TGG - chr2.1:67618687-67618706 None:intergenic 20.0%
!!! AGACTTTGTTCTTTAAAATT+TGG - chr2.1:67619293-67619312 None:intergenic 20.0%
!!! ATTTTAAAGAACAAAGTCTT+TGG + chr2.1:67619294-67619313 MS.gene002741:CDS 20.0%
!!! ATTTTTATGATTTTTGCTGA+GGG + chr2.1:67621726-67621745 MS.gene002741:intron 20.0%
!!! CATTCTTTAAGATTCATTTA+TGG - chr2.1:67620379-67620398 None:intergenic 20.0%
!!! GAAAGTACTTACAAAATTTT+GGG - chr2.1:67619504-67619523 None:intergenic 20.0%
!!! GACTTTGTTCTTTAAAATTT+GGG - chr2.1:67619292-67619311 None:intergenic 20.0%
!!! TATTTTTATGATTTTTGCTG+AGG + chr2.1:67621725-67621744 MS.gene002741:intron 20.0%
!!! TGAAAGTACTTACAAAATTT+TGG - chr2.1:67619505-67619524 None:intergenic 20.0%
!!! TTTTAAAGAACAAAGTCTTT+GGG + chr2.1:67619295-67619314 MS.gene002741:CDS 20.0%
! AAGAATTGTGACTATGTAAA+AGG - chr2.1:67618401-67618420 None:intergenic 25.0%
! AATGATATAGGTTTCAGAAA+TGG + chr2.1:67620235-67620254 MS.gene002741:intron 25.0%
! ATAATAGACAACATTGTCAA+TGG + chr2.1:67618569-67618588 MS.gene002741:CDS 25.0%
! CTATATCATTAGAGTTACTT+GGG - chr2.1:67620225-67620244 None:intergenic 25.0%
! GAGTCTACAAATAATTTACA+TGG + chr2.1:67620992-67621011 MS.gene002741:CDS 25.0%
! GATATCAAATAACATCTCTA+TGG - chr2.1:67619399-67619418 None:intergenic 25.0%
! GTATAATTTATTACAGGCTT+TGG + chr2.1:67618456-67618475 MS.gene002741:intron 25.0%
! TAGCTGACAAAAATAACTTA+TGG - chr2.1:67619771-67619790 None:intergenic 25.0%
! TATATCATTAGAGTTACTTG+GGG - chr2.1:67620224-67620243 None:intergenic 25.0%
! TATCCTTACATTAACAATTC+AGG + chr2.1:67620565-67620584 MS.gene002741:intron 25.0%
! TGAAATTAAATTTGACATGC+TGG - chr2.1:67618945-67618964 None:intergenic 25.0%
! TGAATTGTTAATGTAAGGAT+AGG - chr2.1:67620566-67620585 None:intergenic 25.0%
! TTCCTCTTTCAAAAAATTTC+AGG + chr2.1:67619172-67619191 MS.gene002741:intron 25.0%
! TTGAAATTGTATAGGAAGTA+GGG - chr2.1:67619132-67619151 None:intergenic 25.0%
!! CAAATTTAATTTCATGGTTC+AGG + chr2.1:67618951-67618970 MS.gene002741:intron 25.0%
!! GCATGTCAAATTTAATTTCA+TGG + chr2.1:67618945-67618964 MS.gene002741:intron 25.0%
!! GTAACTAACTTTTTGAACAT+TGG - chr2.1:67619658-67619677 None:intergenic 25.0%
!! TAATAAGAGAGGATTCATTT+TGG + chr2.1:67619851-67619870 MS.gene002741:intron 25.0%
!! TATTATGTATTTTCGTAGTC+TGG - chr2.1:67618348-67618367 None:intergenic 25.0%
!! TGTGATGAATAACCTTTTAA+TGG + chr2.1:67620754-67620773 MS.gene002741:CDS 25.0%
!!! CAGATTATTGCATTTGATTT+TGG - chr2.1:67621770-67621789 None:intergenic 25.0%
!!! GACATTCATTTTAGTTTCTA+AGG - chr2.1:67618719-67618738 None:intergenic 25.0%
!!! TAACTTTTTGAACATTGGTT+TGG - chr2.1:67619653-67619672 None:intergenic 25.0%
!!! TACCTGAAATTTTTTGAAAG+AGG - chr2.1:67619177-67619196 None:intergenic 25.0%
!!! TTGGTTCTATATAAATTGCT+AGG + chr2.1:67620944-67620963 MS.gene002741:CDS 25.0%
AAAAATAAAAAAGGGGGGTT+GGG - chr2.1:67621712-67621731 None:intergenic 30.0%
AAAACTGCAGGTGAAAAATT+TGG + chr2.1:67621849-67621868 MS.gene002741:intron 30.0%
AAAGCTTCTAAACTCAACAT+GGG + chr2.1:67620791-67620810 MS.gene002741:intron 30.0%
AAATTATTATAGCATGTGGC+TGG - chr2.1:67619566-67619585 None:intergenic 30.0%
AACTAATGTTCCTCAGTTAT+AGG - chr2.1:67621627-67621646 None:intergenic 30.0%
ACTAATGTTCCTCAGTTATA+GGG - chr2.1:67621626-67621645 None:intergenic 30.0%
AGATATACTTGACAATTGTG+GGG - chr2.1:67619701-67619720 None:intergenic 30.0%
AGCATTAAATGATCTTCCAA+AGG + chr2.1:67620002-67620021 MS.gene002741:CDS 30.0%
ATGAATCCTCTCTTATTAAG+AGG - chr2.1:67619849-67619868 None:intergenic 30.0%
CAGATATACTTGACAATTGT+GGG - chr2.1:67619702-67619721 None:intergenic 30.0%
CCAAGTAACTCTAATGATAT+AGG + chr2.1:67620223-67620242 MS.gene002741:intron 30.0%
CCTATATCATTAGAGTTACT+TGG - chr2.1:67620226-67620245 None:intergenic 30.0%
CTACTTCCTATACAATTTCA+AGG + chr2.1:67619131-67619150 MS.gene002741:intron 30.0%
CTATATCTGACAGAGATTAA+AGG + chr2.1:67620877-67620896 MS.gene002741:intron 30.0%
CTTGAAATTGTATAGGAAGT+AGG - chr2.1:67619133-67619152 None:intergenic 30.0%
GATACGTAACTTCAATATAC+TGG + chr2.1:67619321-67619340 MS.gene002741:CDS 30.0%
GATATAGATCACACATGATT+AGG - chr2.1:67620864-67620883 None:intergenic 30.0%
GTTAGTTACAAATACAGTGT+AGG + chr2.1:67619669-67619688 MS.gene002741:intron 30.0%
TAAAAATAAAAAAGGGGGGT+TGG - chr2.1:67621713-67621732 None:intergenic 30.0%
TCAGATATACTTGACAATTG+TGG - chr2.1:67619703-67619722 None:intergenic 30.0%
TGAAATTGTATAGGAAGTAG+GGG - chr2.1:67619131-67619150 None:intergenic 30.0%
TGAATCCTCTCTTATTAAGA+GGG - chr2.1:67619848-67619867 None:intergenic 30.0%
TGCCTGTAAAACATTCATTA+GGG - chr2.1:67620714-67620733 None:intergenic 30.0%
TGCTTTCACAATACATTGTA+TGG - chr2.1:67621291-67621310 None:intergenic 30.0%
TTCTTAACATGTTGCGATTA+TGG + chr2.1:67618882-67618901 MS.gene002741:CDS 30.0%
TTGCCTGTAAAACATTCATT+AGG - chr2.1:67620715-67620734 None:intergenic 30.0%
TTTCTGACGTATAAGCAAAA+TGG + chr2.1:67618539-67618558 MS.gene002741:CDS 30.0%
! ATCCCTAATGAATGTTTTAC+AGG + chr2.1:67620709-67620728 MS.gene002741:CDS 30.0%
! ATTTTGCTTATACGTCAGAA+AGG - chr2.1:67618540-67618559 None:intergenic 30.0%
! TGTTTGAGGTTTAAAACAGA+AGG + chr2.1:67619964-67619983 MS.gene002741:CDS 30.0%
!! GTTTGGATAATAGCTTTGAA+GGG - chr2.1:67619636-67619655 None:intergenic 30.0%
AAAATAAAAAAGGGGGGTTG+GGG - chr2.1:67621711-67621730 None:intergenic 35.0%
AACTTAACATGAAACTCGAG+AGG - chr2.1:67619746-67619765 None:intergenic 35.0%
AAGCTTCTAAACTCAACATG+GGG + chr2.1:67620792-67620811 MS.gene002741:intron 35.0%
AATAACATGATACCTGAGGA+TGG + chr2.1:67621106-67621125 MS.gene002741:CDS 35.0%
ACATTCGCTTCAATTACTTC+TGG + chr2.1:67619057-67619076 MS.gene002741:CDS 35.0%
ACCAGTACATAAATGTCTGT+AGG - chr2.1:67620311-67620330 None:intergenic 35.0%
ACCTATACTGAGGATTGAAT+GGG - chr2.1:67618373-67618392 None:intergenic 35.0%
ACTTACATGCTGTTCAACTT+GGG + chr2.1:67619419-67619438 MS.gene002741:CDS 35.0%
ATCCAAAGAAAATTGCAACC+AGG + chr2.1:67618666-67618685 MS.gene002741:CDS 35.0%
ATCCTTAACTTTGGCAAGAA+TGG + chr2.1:67621352-67621371 MS.gene002741:CDS 35.0%
CAAAAACTCGTTCAGATAAG+AGG + chr2.1:67619809-67619828 MS.gene002741:intron 35.0%
CAAAGCTTCTAAACTCAACA+TGG + chr2.1:67620790-67620809 MS.gene002741:intron 35.0%
CATTCGCTTCAATTACTTCT+GGG + chr2.1:67619058-67619077 MS.gene002741:CDS 35.0%
CCACCTGAATTGTTAATGTA+AGG - chr2.1:67620571-67620590 None:intergenic 35.0%
CCTCAGGTATCATGTTATTA+GGG - chr2.1:67621105-67621124 None:intergenic 35.0%
CCTTACATTAACAATTCAGG+TGG + chr2.1:67620568-67620587 MS.gene002741:intron 35.0%
GAAAGAGGAAATTCAGTTCT+TGG - chr2.1:67619162-67619181 None:intergenic 35.0%
GACATTGATGTCATTAGAGA+TGG + chr2.1:67621921-67621940 MS.gene002741:CDS 35.0%
GATCACACATGATTAGGATT+AGG - chr2.1:67620858-67620877 None:intergenic 35.0%
GATCATCTCTTTCTTATTGG+CGG + chr2.1:67621945-67621964 MS.gene002741:CDS 35.0%
GATGTGCCTTGAAATTGTAT+AGG - chr2.1:67619140-67619159 None:intergenic 35.0%
GATTCCAAAAGAACTTGGAT+AGG + chr2.1:67619257-67619276 MS.gene002741:CDS 35.0%
GGTGATCATCTCTTTCTTAT+TGG + chr2.1:67621942-67621961 MS.gene002741:CDS 35.0%
GGTTTAACAGCATACATCAT+TGG + chr2.1:67619440-67619459 MS.gene002741:CDS 35.0%
TACAAATACAGTGTAGGACT+AGG + chr2.1:67619675-67619694 MS.gene002741:intron 35.0%
TCCTACAGACATTTATGTAC+TGG + chr2.1:67620307-67620326 MS.gene002741:CDS 35.0%
TCCTCAGGTATCATGTTATT+AGG - chr2.1:67621106-67621125 None:intergenic 35.0%
TCTGTGTACACTTTCTCTAA+TGG - chr2.1:67621424-67621443 None:intergenic 35.0%
TTCTAGTCATATACTCAGCT+TGG + chr2.1:67618495-67618514 MS.gene002741:CDS 35.0%
TTCTTCCCTCTTAATAAGAG+AGG + chr2.1:67619840-67619859 MS.gene002741:intron 35.0%
TTGCCAAAGTTAAGGATTTG+TGG - chr2.1:67621349-67621368 None:intergenic 35.0%
TTGTCCAAGTGACATAGAAA+TGG + chr2.1:67621465-67621484 MS.gene002741:CDS 35.0%
! AATGTTTTACAGGCAAATCC+AGG + chr2.1:67620719-67620738 MS.gene002741:CDS 35.0%
! TATGATTTTTGCTGAGGGAA+GGG + chr2.1:67621731-67621750 MS.gene002741:intron 35.0%
! TTATGATTTTTGCTGAGGGA+AGG + chr2.1:67621730-67621749 MS.gene002741:intron 35.0%
!! CTATTAACTTGCAAAACTGC+AGG + chr2.1:67621837-67621856 MS.gene002741:intron 35.0%
!! GACATTTATGTACTGGTTTC+AGG + chr2.1:67620314-67620333 MS.gene002741:CDS 35.0%
!! GGTTTGGATAATAGCTTTGA+AGG - chr2.1:67619637-67619656 None:intergenic 35.0%
!!! ATCCAAGTTCTTTTGGAATC+AGG - chr2.1:67619257-67619276 None:intergenic 35.0%
!!! CTTCTTGCTTTTAACTTAGC+CGG - chr2.1:67620174-67620193 None:intergenic 35.0%
!!! TCCAAGTTCTTTTGGAATCA+GGG - chr2.1:67619256-67619275 None:intergenic 35.0%
!!! TTCACTTTTTGTCTCTTCTC+CGG + chr2.1:67620152-67620171 MS.gene002741:intron 35.0%
AAAACTTCTTCCAGAGGTTC+TGG + chr2.1:67618231-67618250 MS.gene002741:CDS 40.0%
AAACTCGAGAGGATTGTACT+AGG - chr2.1:67619735-67619754 None:intergenic 40.0%
AAAGGTCATCACCTATACTG+AGG - chr2.1:67618383-67618402 None:intergenic 40.0%
AAATAAAAAAGGGGGGTTGG+GGG - chr2.1:67621710-67621729 None:intergenic 40.0%
AATCTCGTTCACTGCATTGA+TGG + chr2.1:67620449-67620468 MS.gene002741:CDS 40.0%
ACCCTGATTCCAAAAGAACT+TGG + chr2.1:67619252-67619271 MS.gene002741:CDS 40.0%
ACTACATATGACAGTGAGCT+TGG + chr2.1:67618851-67618870 MS.gene002741:CDS 40.0%
ACTGCAGGTGAAAAATTTGG+CGG + chr2.1:67621852-67621871 MS.gene002741:intron 40.0%
AGCAGCTCTTCTAATGAATC+AGG - chr2.1:67621580-67621599 None:intergenic 40.0%
AGCCATTCTTGCCAAAGTTA+AGG - chr2.1:67621357-67621376 None:intergenic 40.0%
AGTATCACATCTTCCTTTGG+TGG - chr2.1:67620275-67620294 None:intergenic 40.0%
AGTGATCTTCTACCATCTCT+TGG + chr2.1:67618302-67618321 MS.gene002741:CDS 40.0%
ATGATCTTCCAAAGGCGATT+CGG + chr2.1:67620010-67620029 MS.gene002741:CDS 40.0%
ATGTAAATCTCCATAGCCAG+TGG - chr2.1:67619366-67619385 None:intergenic 40.0%
CAAGTGACATAGAAATGGCA+AGG + chr2.1:67621470-67621489 MS.gene002741:CDS 40.0%
CACAGAACCCAAATACCATA+GGG + chr2.1:67621215-67621234 MS.gene002741:CDS 40.0%
CACCTATACTGAGGATTGAA+TGG - chr2.1:67618374-67618393 None:intergenic 40.0%
CACTGTCATATGTAGTGAAG+AGG - chr2.1:67618847-67618866 None:intergenic 40.0%
CACTTACATGCTGTTCAACT+TGG + chr2.1:67619418-67619437 MS.gene002741:CDS 40.0%
CAGTTGGAAAAGGAAGTCAT+TGG - chr2.1:67620100-67620119 None:intergenic 40.0%
CCCTAATAACATGATACCTG+AGG + chr2.1:67621102-67621121 MS.gene002741:CDS 40.0%
CCTATACTGAGGATTGAATG+GGG - chr2.1:67618372-67618391 None:intergenic 40.0%
CTCCTTCATGCATTAAGGAA+TGG - chr2.1:67621018-67621037 None:intergenic 40.0%
GAAGAGAAGAATGACTATCG+TGG - chr2.1:67618637-67618656 None:intergenic 40.0%
GAATATCCACACACAGATCA+TGG + chr2.1:67620920-67620939 MS.gene002741:CDS 40.0%
GAGCCACAAATCCTTAACTT+TGG + chr2.1:67621343-67621362 MS.gene002741:CDS 40.0%
GATATCCAAAACAAACCAGG+TGG - chr2.1:67618792-67618811 None:intergenic 40.0%
GCAGATATCCAAAACAAACC+AGG - chr2.1:67618795-67618814 None:intergenic 40.0%
GCTATGTTTCAGACTCGAAA+AGG + chr2.1:67619034-67619053 MS.gene002741:intron 40.0%
GCTCTTCTAATGAATCAGGT+AGG - chr2.1:67621576-67621595 None:intergenic 40.0%
GCTTCAATTACTTCTGGGTT+AGG + chr2.1:67619063-67619082 MS.gene002741:CDS 40.0%
GGGGAGTTTATGAGGTTTAA+TGG - chr2.1:67619112-67619131 None:intergenic 40.0%
GGGTCAGATGTTGAAACTTT+AGG - chr2.1:67620204-67620223 None:intergenic 40.0%
GTAGTGAAGAGGAGACTAAT+GGG - chr2.1:67618836-67618855 None:intergenic 40.0%
GTATCACATCTTCCTTTGGT+GGG - chr2.1:67620274-67620293 None:intergenic 40.0%
GTCAGAAAGGCAAACTCAAA+GGG - chr2.1:67618527-67618546 None:intergenic 40.0%
GTCTCAAAAACTTCTTCCAG+AGG + chr2.1:67618225-67618244 MS.gene002741:CDS 40.0%
GTTCTCTCCTTCATGCATTA+AGG - chr2.1:67621023-67621042 None:intergenic 40.0%
TACCGTCCTGTTTACTGTTT+CGG - chr2.1:67621384-67621403 None:intergenic 40.0%
TCAGAAAGGCAAACTCAAAG+GGG - chr2.1:67618526-67618545 None:intergenic 40.0%
TCGCGTACACAATCAAATGT+TGG + chr2.1:67619933-67619952 MS.gene002741:CDS 40.0%
TCTGTAGTTCGAACTGTGAA+AGG - chr2.1:67620659-67620678 None:intergenic 40.0%
TGACTAACCTTGTAGTTCAC+TGG + chr2.1:67619468-67619487 MS.gene002741:CDS 40.0%
TGCAGTATCACATCTTCCTT+TGG - chr2.1:67620278-67620297 None:intergenic 40.0%
TGGTTGGACGAAATGGAAAT+GGG + chr2.1:67618251-67618270 MS.gene002741:CDS 40.0%
TGTAGTGAAGAGGAGACTAA+TGG - chr2.1:67618837-67618856 None:intergenic 40.0%
TGTTGGCACACATTTGTTTG+AGG + chr2.1:67619950-67619969 MS.gene002741:CDS 40.0%
TTCCTTTGGTGGGAAATACT+CGG - chr2.1:67620264-67620283 None:intergenic 40.0%
! ACATAGCAAAGGTGCAAGTA+AGG - chr2.1:67619021-67619040 None:intergenic 40.0%
! AGCACCTATCCAAGTTCTTT+TGG - chr2.1:67619264-67619283 None:intergenic 40.0%
! AGCATTGAACCCTATAACTG+AGG + chr2.1:67621614-67621633 MS.gene002741:intron 40.0%
! ATCTCGTTCACTGCATTGAT+GGG + chr2.1:67620450-67620469 MS.gene002741:CDS 40.0%
! ATGGATTGTTACCCTCTTCT+TGG - chr2.1:67621500-67621519 None:intergenic 40.0%
! CAATGACTTCCTTTTCCAAC+TGG + chr2.1:67620098-67620117 MS.gene002741:CDS 40.0%
! CACCTGGTTGCAATTTTCTT+TGG - chr2.1:67618671-67618690 None:intergenic 40.0%
! CTTGCCATTTCTATGTCACT+TGG - chr2.1:67621472-67621491 None:intergenic 40.0%
! TCGAGTCTGAAACATAGCAA+AGG - chr2.1:67619032-67619051 None:intergenic 40.0%
! TTTTGACAAAGCAACTGCAG+TGG + chr2.1:67620592-67620611 MS.gene002741:CDS 40.0%
!! AGGATTCATTTTGGTCACAG+AGG + chr2.1:67619860-67619879 MS.gene002741:intron 40.0%
!! ATTTTCGTAGTCTGGTTTCC+TGG - chr2.1:67618340-67618359 None:intergenic 40.0%
!! GGATTCATTTTGGTCACAGA+GGG + chr2.1:67619861-67619880 MS.gene002741:intron 40.0%
!! TACAAAATTTTGGGTGCGAC+TGG - chr2.1:67619495-67619514 None:intergenic 40.0%
!!! CTGGAAGAAGTTTTTGAGAC+TGG - chr2.1:67618225-67618244 None:intergenic 40.0%
AATAAAAAAGGGGGGTTGGG+GGG - chr2.1:67621709-67621728 None:intergenic 45.0%
ACCAATCCATGATCTGTGTG+TGG - chr2.1:67620929-67620948 None:intergenic 45.0%
ACCCGAAACAGTAAACAGGA+CGG + chr2.1:67621379-67621398 MS.gene002741:CDS 45.0%
ACCGTCCTGTTTACTGTTTC+GGG - chr2.1:67621383-67621402 None:intergenic 45.0%
AGAACCCAAATACCATAGGG+TGG + chr2.1:67621218-67621237 MS.gene002741:CDS 45.0%
AGGAAGTAGGGGAGTTTATG+AGG - chr2.1:67619120-67619139 None:intergenic 45.0%
ATCACAATCTGTGCATCTCC+TGG - chr2.1:67620740-67620759 None:intergenic 45.0%
ATTTGATTGTGTACGCGACG+TGG - chr2.1:67619931-67619950 None:intergenic 45.0%
CATGTAGTTACATGTCCACC+TGG + chr2.1:67618774-67618793 MS.gene002741:intron 45.0%
CCCCATTCAATCCTCAGTAT+AGG + chr2.1:67618369-67618388 MS.gene002741:CDS 45.0%
CGTCAGAAAGGCAAACTCAA+AGG - chr2.1:67618528-67618547 None:intergenic 45.0%
CTCAACCCGAAACAGTAAAC+AGG + chr2.1:67621375-67621394 MS.gene002741:CDS 45.0%
CTGGTTGGACGAAATGGAAA+TGG + chr2.1:67618250-67618269 MS.gene002741:CDS 45.0%
GAAGAGCTGCTCAAAATTGC+TGG + chr2.1:67621589-67621608 MS.gene002741:CDS 45.0%
GAGTCAGTTCTCTGTTTGCA+AGG + chr2.1:67618915-67618934 MS.gene002741:CDS 45.0%
GCACAGAACCCAAATACCAT+AGG + chr2.1:67621214-67621233 MS.gene002741:CDS 45.0%
GCACGACAGGAAAAAAGAGA+TGG - chr2.1:67620050-67620069 None:intergenic 45.0%
GGCCATTCCTTAATGCATGA+AGG + chr2.1:67621013-67621032 MS.gene002741:CDS 45.0%
GTAACAATCCATTCGCCAAG+TGG + chr2.1:67621508-67621527 MS.gene002741:CDS 45.0%
GTGTCCACCCTATGGTATTT+GGG - chr2.1:67621225-67621244 None:intergenic 45.0%
TCCACACACAGATCATGGAT+TGG + chr2.1:67620925-67620944 MS.gene002741:CDS 45.0%
TGTGTCCACCCTATGGTATT+TGG - chr2.1:67621226-67621245 None:intergenic 45.0%
! ACATGTGGGGTATTACCAGT+TGG - chr2.1:67620116-67620135 None:intergenic 45.0%
! AGATCTCTTTTGCCATCCTC+AGG - chr2.1:67621121-67621140 None:intergenic 45.0%
! AGCTTTTTGTGTCCACCCTA+TGG - chr2.1:67621233-67621252 None:intergenic 45.0%
! CAGAGATTAAAGGAGCGTGA+AGG + chr2.1:67620887-67620906 MS.gene002741:intron 45.0%
! GCAAGTAAGGAAGAAAGCAC+TGG - chr2.1:67619008-67619027 None:intergenic 45.0%
! GGGGTATTACCAGTTGGAAA+AGG - chr2.1:67620110-67620129 None:intergenic 45.0%
! TCTAGTTTCCCCTTATGCAC+AGG - chr2.1:67621160-67621179 None:intergenic 45.0%
!! GTCTGGTTTCCTGGTTTGTT+CGG - chr2.1:67618331-67618350 None:intergenic 45.0%
!! GTGGAAGCATTTGGAGAGAT+TGG + chr2.1:67620611-67620630 MS.gene002741:CDS 45.0%
!! TCTGGTTTCCTGGTTTGTTC+GGG - chr2.1:67618330-67618349 None:intergenic 45.0%
!!! CATGTCCACCTGGTTTGTTT+TGG + chr2.1:67618784-67618803 MS.gene002741:CDS 45.0%
!!! CTTTTTTCCTGTCGTGCAGA+AGG + chr2.1:67620053-67620072 MS.gene002741:CDS 45.0%
!! AAAAATCATAAAAATAAAAA+AGG - chr2.1:67621721-67621740 None:intergenic 5.0%
!! AAAATCATAAAAATAAAAAA+GGG - chr2.1:67621720-67621739 None:intergenic 5.0%
ACACACGCATACACACACGT+GGG + chr2.1:67621649-67621668 MS.gene002741:intron 50.0%
AGCCGAGTATTTCCCACCAA+AGG + chr2.1:67620259-67620278 MS.gene002741:CDS 50.0%
AGTAGCTCACATGGACAGCA+CGG + chr2.1:67621538-67621557 MS.gene002741:CDS 50.0%
ATAAAAAAGGGGGGTTGGGG+GGG - chr2.1:67621708-67621727 None:intergenic 50.0%
ATCGTCACGCTTACTACCAC+TGG + chr2.1:67619347-67619366 MS.gene002741:CDS 50.0%
ATGCTTGACCGAATCGCCTT+TGG - chr2.1:67620021-67620040 None:intergenic 50.0%
CAATCCATTCGCCAAGTGGA+TGG + chr2.1:67621512-67621531 MS.gene002741:CDS 50.0%
CAGAAGGTCTACCTCTTCCA+AGG + chr2.1:67620069-67620088 MS.gene002741:CDS 50.0%
CATTGGAGACTCCTTGGAAG+AGG - chr2.1:67620083-67620102 None:intergenic 50.0%
GAACGTAAGCACGATGTCGA+TGG - chr2.1:67618603-67618622 None:intergenic 50.0%
GAGCTACTTCTCCATCCACT+TGG - chr2.1:67621526-67621545 None:intergenic 50.0%
GGAAGTCATTGGAGACTCCT+TGG - chr2.1:67620089-67620108 None:intergenic 50.0%
GGATGGAGAAGTAGCTCACA+TGG + chr2.1:67621529-67621548 MS.gene002741:CDS 50.0%
GGCAAGGTTCACCAAGAAGA+GGG + chr2.1:67621486-67621505 MS.gene002741:CDS 50.0%
GTTCGAACTGTGAAAGGCTG+TGG - chr2.1:67620653-67620672 None:intergenic 50.0%
TACACACACGTGGGAGAGAA+TGG + chr2.1:67621658-67621677 MS.gene002741:intron 50.0%
TGCACAGTGCACTGCAAACA+AGG - chr2.1:67619201-67619220 None:intergenic 50.0%
TGGCAAGGTTCACCAAGAAG+AGG + chr2.1:67621485-67621504 MS.gene002741:CDS 50.0%
TTATAGCATGTGGCTGGCAC+AGG - chr2.1:67619560-67619579 None:intergenic 50.0%
TTCTCCATCCACTTGGCGAA+TGG - chr2.1:67621519-67621538 None:intergenic 50.0%
TTGTTTGCAGTGCACTGTGC+AGG + chr2.1:67619200-67619219 MS.gene002741:CDS 50.0%
TTTCGTCCAACCAGAACCTC+TGG - chr2.1:67618244-67618263 None:intergenic 50.0%
! ACGCTTACTACCACTGGCTA+TGG + chr2.1:67619353-67619372 MS.gene002741:CDS 50.0%
! CTTCTTCCAGAGGTTCTGGT+TGG + chr2.1:67618235-67618254 MS.gene002741:CDS 50.0%
! GACTGGTCCAGTGAACTACA+AGG - chr2.1:67619478-67619497 None:intergenic 50.0%
! GAGGTTCTGGTTGGACGAAA+TGG + chr2.1:67618244-67618263 MS.gene002741:CDS 50.0%
! GTGGTGAGTTGGCTAAAGCA+TGG + chr2.1:67620341-67620360 MS.gene002741:intron 50.0%
!! ACAGAGAACTGACTCGTCTC+AGG - chr2.1:67618910-67618929 None:intergenic 50.0%
!! AGGAGACTAATGGGCTCAAG+TGG - chr2.1:67618827-67618846 None:intergenic 50.0%
!! GCAACTGCAGTGGAAGCATT+TGG + chr2.1:67620602-67620621 MS.gene002741:CDS 50.0%
AGGTAGACCTTCTGCACGAC+AGG - chr2.1:67620063-67620082 None:intergenic 55.0%
CTGTGCTGCCTGTGCATAAG+GGG + chr2.1:67621149-67621168 MS.gene002741:CDS 55.0%
GACACACGCATACACACACG+TGG + chr2.1:67621648-67621667 MS.gene002741:intron 55.0%
GCTGTGCTGCCTGTGCATAA+GGG + chr2.1:67621148-67621167 MS.gene002741:CDS 55.0%
TAAAAAAGGGGGGTTGGGGG+GGG - chr2.1:67621707-67621726 None:intergenic 55.0%
TGCTGTGCTGCCTGTGCATA+AGG + chr2.1:67621147-67621166 MS.gene002741:CDS 55.0%
TTTCAGGCGCAGTGGTGAGT+TGG + chr2.1:67620330-67620349 MS.gene002741:intron 55.0%
TTTGTTCGGGCGCCAAGAGA+TGG - chr2.1:67618317-67618336 None:intergenic 55.0%
!! TGTACTGGTTTCAGGCGCAG+TGG + chr2.1:67620322-67620341 MS.gene002741:CDS 55.0%
AAAAAAGGGGGGTTGGGGGG+GGG - chr2.1:67621706-67621725 None:intergenic 60.0%
TCTTGGCGCCCGAACAAACC+AGG + chr2.1:67618319-67618338 MS.gene002741:CDS 60.0%
AAAAAGGGGGGTTGGGGGGG+GGG - chr2.1:67621705-67621724 None:intergenic 65.0%
GCACAGGCAGCACAGCAGCA+TGG - chr2.1:67621144-67621163 None:intergenic 65.0%
AAAAGGGGGGTTGGGGGGGG+GGG - chr2.1:67621704-67621723 None:intergenic 70.0%
AAAGGGGGGTTGGGGGGGGG+GGG - chr2.1:67621703-67621722 None:intergenic 75.0%
! AAGGGGGGTTGGGGGGGGGG+GGG - chr2.1:67621702-67621721 None:intergenic 80.0%
! AGGGGGGTTGGGGGGGGGGG+GGG - chr2.1:67621701-67621720 None:intergenic 85.0%
! GGGGGGTTGGGGGGGGGGGG+GGG - chr2.1:67621700-67621719 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 67618212 67621992 67618212 ID=MS.gene002741
chr2.1 mRNA 67618212 67621992 67618212 ID=MS.gene002741.t1;Parent=MS.gene002741
chr2.1 exon 67618212 67618390 67618212 ID=MS.gene002741.t1.exon1;Parent=MS.gene002741.t1
chr2.1 CDS 67618212 67618390 67618212 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67618472 67618687 67618472 ID=MS.gene002741.t1.exon2;Parent=MS.gene002741.t1
chr2.1 CDS 67618472 67618687 67618472 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67618781 67618936 67618781 ID=MS.gene002741.t1.exon3;Parent=MS.gene002741.t1
chr2.1 CDS 67618781 67618936 67618781 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67619046 67619103 67619046 ID=MS.gene002741.t1.exon4;Parent=MS.gene002741.t1
chr2.1 CDS 67619046 67619103 67619046 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67619194 67619511 67619194 ID=MS.gene002741.t1.exon5;Parent=MS.gene002741.t1
chr2.1 CDS 67619194 67619511 67619194 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67619880 67620119 67619880 ID=MS.gene002741.t1.exon6;Parent=MS.gene002741.t1
chr2.1 CDS 67619880 67620119 67619880 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67620245 67620343 67620245 ID=MS.gene002741.t1.exon7;Parent=MS.gene002741.t1
chr2.1 CDS 67620245 67620343 67620245 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67620449 67620481 67620449 ID=MS.gene002741.t1.exon8;Parent=MS.gene002741.t1
chr2.1 CDS 67620449 67620481 67620449 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67620587 67620775 67620587 ID=MS.gene002741.t1.exon9;Parent=MS.gene002741.t1
chr2.1 CDS 67620587 67620775 67620587 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67620890 67621610 67620890 ID=MS.gene002741.t1.exon10;Parent=MS.gene002741.t1
chr2.1 CDS 67620890 67621610 67620890 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
chr2.1 exon 67621859 67621992 67621859 ID=MS.gene002741.t1.exon11;Parent=MS.gene002741.t1
chr2.1 CDS 67621859 67621992 67621859 ID=cds.MS.gene002741.t1;Parent=MS.gene002741.t1
Gene Sequence

>MS.gene002741

ATGTCATTTTCCAGTCTCAAAAACTTCTTCCAGAGGTTCTGGTTGGACGAAATGGAAATGGGAAGTTATACACATAGCAGCTTTTTGTCTAGTGATCTTCTACCATCTCTTGGCGCCCGAACAAACCAGGAAACCAGACTACGAAAATACATAATATCCCCATTCAATCCTCAGTATAGGTGATGACCTTTTACATAGTCACAATTCTTATGAATATTGTATCTGCATCTTCTCAAGTTTTCATGTATAATTTATTACAGGCTTTGGGAGTTGTTACTGATTGTTCTAGTCATATACTCAGCTTGGATATGCCCCTTTGAGTTTGCCTTTCTGACGTATAAGCAAAATGGACTATTCATAATAGACAACATTGTCAATGGCTTCTTTGCCATCGACATCGTGCTTACGTTCTTCGTTGCATACCACGATAGTCATTCTTCTCTTCTCATTGATGATCCAAAGAAAATTGCAACCAGGTGATATATATAGATATAAACTTTTCTTCCTTAGAAACTAAAATGAATGTCGAAAATCCCTACTTACTTTTCAAATTTCTACACAACATGTAGTTACATGTCCACCTGGTTTGTTTTGGATATCTGCTCAACAGCACCACTTGAGCCCATTAGTCTCCTCTTCACTACATATGACAGTGAGCTTGGTTTCAAACTTCTTAACATGTTGCGATTATGGCGCCTGAGACGAGTCAGTTCTCTGTTTGCAAGGTTTGCCAGCATGTCAAATTTAATTTCATGGTTCAGGTTTAATCAATTCTTCTATTTACTAGAATATTCCAGTGCTTTCTTCCTTACTTGCACCTTTGCTATGTTTCAGACTCGAAAAGGACATTCGCTTCAATTACTTCTGGGTTAGGTGTACAAAGCTCACTGCTGTAAGCCATTAAACCTCATAAACTCCCCTACTTCCTATACAATTTCAAGGCACATCCAAGAACTGAATTTCCTCTTTCAAAAAATTTCAGGTAACCTTGTTTGCAGTGCACTGTGCAGGATGCTTTAACTATCTACTTGCAGATATGTACCCTGATTCCAAAAGAACTTGGATAGGTGCTATGTACCCAAATTTTAAAGAACAAAGTCTTTGGGACAGATACGTAACTTCAATATACTGGTCTATCGTCACGCTTACTACCACTGGCTATGGAGATTTACATGCAGAGAACACCATAGAGATGTTATTTGATATCACTTACATGCTGTTCAACTTGGGTTTAACAGCATACATCATTGGAAACATGACTAACCTTGTAGTTCACTGGACCAGTCGCACCCAAAATTTTGTAAGTACTTTCAATCTTAAGCTTCTTCTACTGCTGCTCAATTTTCCTGTGCCAGCCACATGCTATAATAATTTTATATTATACATGTGTTGGACTAAACTCTTATTATCATTCAGCAATGCCCTTCAAAGCTATTATCCAAACCAATGTTCAAAAAGTTAGTTACAAATACAGTGTAGGACTAGGCCCCACAATTGTCAAGTATATCTGAAATAGCACACCTAGTACAATCCTCTCGAGTTTCATGTTAAGTTAACCATAAGTTATTTTTGTCAGCTAATTGTGTCTTTTCTAAAACAAAAACTCGTTCAGATAAGAGGAAATTTATTTCTTCCCTCTTAATAAGAGAGGATTCATTTTGGTCACAGAGGGATACAGTCAAAGCAGCTTCTGAGTTTGCTTCAAGAAATCATCTGCCACGTCGCGTACACAATCAAATGTTGGCACACATTTGTTTGAGGTTTAAAACAGAAGGACTGAAGCAGCAAGAAGCATTAAATGATCTTCCAAAGGCGATTCGGTCAAGCATCGCACACCATCTCTTTTTTCCTGTCGTGCAGAAGGTCTACCTCTTCCAAGGAGTCTCCAATGACTTCCTTTTCCAACTGGTAATACCCCACATGTCTTTTTATTTTATTTTTTCACTTTTTGTCTCTTCTCCGGCTAAGTTAAAAGCAAGAAGATGAAGACCTAAAGTTTCAACATCTGACCCCAAGTAACTCTAATGATATAGGTTTCAGAAATGGAAGCCGAGTATTTCCCACCAAAGGAAGATGTGATACTGCAAAATGAGTCTCCTACAGACATTTATGTACTGGTTTCAGGCGCAGTGGTGAGTTGGCTAAAGCATGGATAGTCTAGTAACCATAAATGAATCTTAAAGAATGTCTACTAATATTTTTTTGTAAAATCTTTTCAAATGACTACTTTGTTGCAGAATCTCGTTCACTGCATTGATGGGAATGATCAAGTATGTCATAACTCATAATACTCAAACAGAACATGTTTTTTCTTTCGTCAAATTATGCAATGAAGCAACTGAATTTAACTTCCTATCCTTACATTAACAATTCAGGTGGTTTTTGACAAAGCAACTGCAGTGGAAGCATTTGGAGAGATTGGAGTTTTATATAATGTACCACAGCCTTTCACAGTTCGAACTACAGAGCTTTCTCAGATTTTAAGAATCAACAGAACATCCCTAATGAATGTTTTACAGGCAAATCCAGGAGATGCACAGATTGTGATGAATAACCTTTTAATGGTAATTAAGATATTCAAAGCTTCTAAACTCAACATGGGGAATATGTTGTATAAATTATATTTATCAATCATAGTAGGTTCCTAATCCTAATCATGTGTGATCTATATCTGACAGAGATTAAAGGAGCGTGAAGGATTCGACTCTGAATATCCACACACAGATCATGGATTGGTTCTATATAAATTGCTAGGTAACACAAAAGAAAGCTCTTCTCAAGAGTCTACAAATAATTTACATGGCCATTCCTTAATGCATGAAGGAGAGAACATAAATATCAGAGACTCACAGAATAATTTGCATATTGTGACTAATGATGTTTATTCAGACCCTAATAACATGATACCTGAGGATGGCAAAAGAGATCTCCATGCTGCTGTGCTGCCTGTGCATAAGGGGAAACTAGACATTGTTGAAATTCTGATTGAAAGAGATGCAAAAGCACAGAACCCAAATACCATAGGGTGGACACAAAAAGCTCTAGTACAACAGTTAAAAAACAAGAGCACTTCTGACCATACAATGTATTGTGAAAGCAAAAAATCAGATGAACATAGAATTGAGATTGTTGAGCCACAAATCCTTAACTTTGGCAAGAATGGCTCAACCCGAAACAGTAAACAGGACGGTATTAGAAATATCAACTTTCCATTAGAGAAAGTGTACACAGACACCAATTCAAGAAATTTTGATTGTCCAAGTGACATAGAAATGGCAAGGTTCACCAAGAAGAGGGTAACAATCCATTCGCCAAGTGGATGGAGAAGTAGCTCACATGGACAGCACGGAAAACTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTAAGCATTGAACCCTATAACTGAGGAACATTAGTTTGACACACGCATACACACACGTGGGAGAGAATGGAAAGAGCGATATCAGTCCCCCCCCCCCCCCCAACCCCCCTTTTTTATTTTTATGATTTTTGCTGAGGGAAGGGAAGAGAGATACTGCCAAAATCAAATGCAATAATCTGAACACAGAACAGTAGAACTCTGTACTGCTATTACTTTCAACTTCTAACTATTAACTTGCAAAACTGCAGGTGAAAAATTTGGCGGCTTCAATGCCACAAAAATAATTAATAAAGAGAATGCAGAGATAGACGACATTGATGTCATTAGAGATGGTGATCATCTCTTTCTTATTGGCGGTGATATTGACAATTTGAACTCATGA
Protein sequence

>MS.gene002741.t1

MSFSSLKNFFQRFWLDEMEMGSYTHSSFLSSDLLPSLGARTNQETRLRKYIISPFNPQYRLWELLLIVLVIYSAWICPFEFAFLTYKQNGLFIIDNIVNGFFAIDIVLTFFVAYHDSHSSLLIDDPKKIATSYMSTWFVLDICSTAPLEPISLLFTTYDSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWVRCTKLTAVTLFAVHCAGCFNYLLADMYPDSKRTWIGAMYPNFKEQSLWDRYVTSIYWSIVTLTTTGYGDLHAENTIEMLFDITYMLFNLGLTAYIIGNMTNLVVHWTSRTQNFRDTVKAASEFASRNHLPRRVHNQMLAHICLRFKTEGLKQQEALNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSNDFLFQLVSEMEAEYFPPKEDVILQNESPTDIYVLVSGAVNLVHCIDGNDQVVFDKATAVEAFGEIGVLYNVPQPFTVRTTELSQILRINRTSLMNVLQANPGDAQIVMNNLLMRLKEREGFDSEYPHTDHGLVLYKLLGNTKESSSQESTNNLHGHSLMHEGENINIRDSQNNLHIVTNDVYSDPNNMIPEDGKRDLHAAVLPVHKGKLDIVEILIERDAKAQNPNTIGWTQKALVQQLKNKSTSDHTMYCESKKSDEHRIEIVEPQILNFGKNGSTRNSKQDGIRNINFPLEKVYTDTNSRNFDCPSDIEMARFTKKRVTIHSPSGWRSSSHGQHGKLIILPDSLEELLKIAGEKFGGFNATKIINKENAEIDDIDVIRDGDHLFLIGGDIDNLNS