Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50365.t1 | XP_027187359.1 | 86.1 | 259 | 24 | 3 | 1 | 259 | 1 | 247 | 4.40E-119 | 437.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50365.t1 | Q946Y7 | 65.5 | 226 | 71 | 4 | 1 | 225 | 1 | 220 | 1.7e-74 | 280.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50365.t1 | A0A3Q7X0P4 | 86.1 | 259 | 24 | 3 | 1 | 259 | 1 | 247 | 3.2e-119 | 437.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50365 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene04915 | MS.gene50365 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene50365 | 0.825415 | 4.75E-54 | -1.69E-46 |
| MS.gene049208 | MS.gene50365 | 0.807612 | 4.64E-50 | -1.69E-46 |
| MS.gene04984 | MS.gene50365 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene049887 | MS.gene50365 | 0.820145 | 8.00E-53 | -1.69E-46 |
| MS.gene050085 | MS.gene50365 | 0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene50365 | 0.812537 | 4.03E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene50365 | 0.831158 | 1.96E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene50365 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene50365 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene50365 | 0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene50365 | 0.842271 | 2.86E-58 | -1.69E-46 |
| MS.gene051063 | MS.gene50365 | 0.810639 | 1.04E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene50365 | 0.841981 | 3.42E-58 | -1.69E-46 |
| MS.gene051381 | MS.gene50365 | 0.80366 | 3.14E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene50365 | 0.803049 | 4.20E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene50365 | 0.821471 | 3.97E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene50365 | 0.813507 | 2.47E-51 | -1.69E-46 |
| MS.gene051756 | MS.gene50365 | 0.803546 | 3.31E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene50365 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene50365 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene052242 | MS.gene50365 | -0.803265 | 3.79E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene50365 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene50365 | 0.812215 | 4.74E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene50365 | 0.815573 | 8.62E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene50365 | 0.828947 | 6.77E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene50365 | 0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene50365 | 0.812436 | 4.24E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene50365 | 0.823896 | 1.08E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene50365 | 0.841983 | 3.41E-58 | -1.69E-46 |
| MS.gene055313 | MS.gene50365 | 0.836234 | 1.05E-56 | -1.69E-46 |
| MS.gene055314 | MS.gene50365 | 0.834027 | 3.80E-56 | -1.69E-46 |
| MS.gene055469 | MS.gene50365 | 0.819415 | 1.18E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene50365 | 0.811815 | 5.80E-51 | -1.69E-46 |
| MS.gene056432 | MS.gene50365 | 0.803911 | 2.78E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene50365 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene056849 | MS.gene50365 | 0.800654 | 1.30E-48 | -1.69E-46 |
| MS.gene057094 | MS.gene50365 | 0.816398 | 5.65E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene50365 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene50365 | 0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene057999 | MS.gene50365 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene058278 | MS.gene50365 | 0.826383 | 2.80E-54 | -1.69E-46 |
| MS.gene058638 | MS.gene50365 | 0.837799 | 4.20E-57 | -1.69E-46 |
| MS.gene058639 | MS.gene50365 | 0.850754 | 1.38E-60 | -1.69E-46 |
| MS.gene058654 | MS.gene50365 | 0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene50365 | 0.84959 | 2.93E-60 | -1.69E-46 |
| MS.gene058906 | MS.gene50365 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene059050 | MS.gene50365 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene50365 | 0.803705 | 3.07E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene50365 | 0.849837 | 2.50E-60 | -1.69E-46 |
| MS.gene059227 | MS.gene50365 | 0.810264 | 1.26E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene50365 | 0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene50365 | 0.810786 | 9.69E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene50365 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene50365 | 0.809434 | 1.90E-50 | -1.69E-46 |
| MS.gene060702 | MS.gene50365 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene50365 | 0.844225 | 8.63E-59 | -1.69E-46 |
| MS.gene060870 | MS.gene50365 | 0.834152 | 3.54E-56 | -1.69E-46 |
| MS.gene061006 | MS.gene50365 | 0.816954 | 4.24E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66057 | MS.gene50365 | PPI |
| MS.gene81965 | MS.gene50365 | PPI |
| MS.gene033077 | MS.gene50365 | PPI |
| MS.gene013657 | MS.gene50365 | PPI |
| MS.gene50365 | MS.gene063476 | PPI |
| MS.gene005292 | MS.gene50365 | PPI |
| MS.gene78212 | MS.gene50365 | PPI |
| MS.gene69311 | MS.gene50365 | PPI |
| MS.gene052932 | MS.gene50365 | PPI |
| MS.gene44169 | MS.gene50365 | PPI |
| MS.gene044431 | MS.gene50365 | PPI |
| MS.gene072972 | MS.gene50365 | PPI |
| MS.gene77217 | MS.gene50365 | PPI |
| MS.gene40807 | MS.gene50365 | PPI |
| MS.gene056096 | MS.gene50365 | PPI |
| MS.gene65117 | MS.gene50365 | PPI |
| MS.gene44168 | MS.gene50365 | PPI |
| MS.gene056094 | MS.gene50365 | PPI |
| MS.gene02663 | MS.gene50365 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50365.t1 | MTR_5g092870 | 97.260 | 219 | 5 | 1 | 1 | 219 | 1 | 218 | 1.54e-155 | 434 |
| MS.gene50365.t1 | MTR_3g052210 | 75.342 | 219 | 49 | 3 | 1 | 219 | 1 | 214 | 9.93e-117 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50365.t1 | AT1G28490 | 65.487 | 226 | 71 | 4 | 1 | 225 | 1 | 220 | 3.18e-101 | 296 |
| MS.gene50365.t1 | AT1G28490 | 64.912 | 171 | 54 | 3 | 55 | 225 | 11 | 175 | 1.46e-70 | 216 |
| MS.gene50365.t1 | AT1G28490 | 64.912 | 171 | 54 | 3 | 55 | 225 | 17 | 181 | 3.12e-70 | 216 |
Find 64 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTTGACAACGTAAAA+TGG | 0.199042 | 4.4:-78693888 | None:intergenic |
| TCTTGGTTGTAAATGCAAAA+AGG | 0.254892 | 4.4:+78698526 | MS.gene50365:CDS |
| TTGAGAAGACAAAAGATTAA+TGG | 0.283480 | 4.4:+78698558 | MS.gene50365:CDS |
| TACCTGGGTGCGAGCATTGC+TGG | 0.310121 | 4.4:-78695504 | None:intergenic |
| TGAAGAATACCAAGATAAAA+AGG | 0.311255 | 4.4:-78698485 | None:intergenic |
| GGAAAAGATTCTAGATGAAC+TGG | 0.327556 | 4.4:+78698208 | MS.gene50365:intron |
| TGATAGAAAGGTGGATGAAT+TGG | 0.340172 | 4.4:+78695400 | MS.gene50365:intron |
| GACGTACTTTGATGAGAATC+TGG | 0.370989 | 4.4:-78695820 | None:intergenic |
| CATTATCCCCAGAGGCATAT+TGG | 0.373000 | 4.4:-78695852 | None:intergenic |
| GATGATGATATGCGGTTTGC+TGG | 0.376292 | 4.4:+78698449 | MS.gene50365:CDS |
| TAGCATCTAGAGATCCTTCT+TGG | 0.380240 | 4.4:+78695438 | MS.gene50365:CDS |
| TGGGAAAACACTTCTGATAC+TGG | 0.386415 | 4.4:+78694498 | MS.gene50365:CDS |
| CATTGCTGGTCCACCTCCTC+CGG | 0.425273 | 4.4:-78695490 | None:intergenic |
| CAATACATGAAGAGCTCCTT+GGG | 0.426328 | 4.4:+78697991 | MS.gene50365:CDS |
| AAGTCTAACCAATATGCCTC+TGG | 0.429106 | 4.4:+78695844 | MS.gene50365:CDS |
| ATGAAGAAGGCCAGTGCAAA+GGG | 0.430950 | 4.4:+78698417 | MS.gene50365:CDS |
| CATCATCTGCCCCTTTGCAC+TGG | 0.444110 | 4.4:-78698427 | None:intergenic |
| AGTTTAAGTGTACAGAGAAT+CGG | 0.466460 | 4.4:+78697954 | MS.gene50365:CDS |
| CAGCAAGAACTTCCTTTGAA+AGG | 0.473857 | 4.4:-78694533 | None:intergenic |
| TTGTGGAAGTATTGAGTGGC+AGG | 0.474925 | 4.4:+78694557 | MS.gene50365:CDS |
| AAGGAAGTTCTTGCTGCTTG+TGG | 0.475725 | 4.4:+78694540 | MS.gene50365:CDS |
| CTAGTATAAGTGGGATGCAC+AGG | 0.476219 | 4.4:+78695782 | MS.gene50365:CDS |
| ACAATACATGAAGAGCTCCT+TGG | 0.478003 | 4.4:+78697990 | MS.gene50365:CDS |
| ACAACTCATGCTAGTATAAG+TGG | 0.493222 | 4.4:+78695772 | MS.gene50365:CDS |
| ATTAAGAGAACAGTGGAAGC+TGG | 0.496755 | 4.4:+78695733 | MS.gene50365:CDS |
| TCATAGAATCAGAATCAGAT+AGG | 0.505091 | 4.4:+78695881 | MS.gene50365:CDS |
| ATGAAGTGGAGATTGAAAAC+CGG | 0.508658 | 4.4:+78695471 | MS.gene50365:CDS |
| TACTGATAGGCAGCAGGACG+AGG | 0.512554 | 4.4:+78697917 | MS.gene50365:intron |
| GAGAACAGTGGAAGCTGGAA+AGG | 0.519334 | 4.4:+78695738 | MS.gene50365:CDS |
| ACATGAAGAGCTCCTTGGGC+AGG | 0.525155 | 4.4:+78697995 | MS.gene50365:CDS |
| AGTCTAACCAATATGCCTCT+GGG | 0.528315 | 4.4:+78695845 | MS.gene50365:CDS |
| TAGGCAGCAGGACGAGGAGT+TGG | 0.528875 | 4.4:+78697923 | MS.gene50365:intron |
| AGATTGAAAACCGGAGGAGG+TGG | 0.529877 | 4.4:+78695480 | MS.gene50365:CDS |
| TTGGACAAAATCTAGACGAT+TGG | 0.532143 | 4.4:-78698252 | None:intergenic |
| GTACAGAGAATCGGAGGTGT+TGG | 0.534643 | 4.4:+78697963 | MS.gene50365:CDS |
| TCTAGAGATCCTTCTTGGTA+TGG | 0.537717 | 4.4:+78695443 | MS.gene50365:CDS |
| AGATGAACTGGGAAATGAGA+TGG | 0.539156 | 4.4:+78698220 | MS.gene50365:CDS |
| CTAGTCATATCTGAATGTCT+TGG | 0.543882 | 4.4:+78698509 | MS.gene50365:CDS |
| AGTGGCAATGGTGATGAAGA+AGG | 0.556318 | 4.4:+78698404 | MS.gene50365:CDS |
| ATTTCAGAAAAGAGTGGCAA+TGG | 0.560428 | 4.4:+78698392 | MS.gene50365:CDS |
| TACTGGTACTGATAGGCAGC+AGG | 0.561867 | 4.4:+78697911 | MS.gene50365:intron |
| AGAACAGTGGAAGCTGGAAA+GGG | 0.568137 | 4.4:+78695739 | MS.gene50365:CDS |
| GATGAAGAAGGCCAGTGCAA+AGG | 0.571528 | 4.4:+78698416 | MS.gene50365:CDS |
| TGGAGATTGAAAACCGGAGG+AGG | 0.573238 | 4.4:+78695477 | MS.gene50365:CDS |
| TTGGTATGGCATTGATGAAG+TGG | 0.577534 | 4.4:+78695457 | MS.gene50365:CDS |
| CAAGACATTCAGATATGACT+AGG | 0.584511 | 4.4:-78698508 | None:intergenic |
| TAAAATGGATCTTGAGCTGA+GGG | 0.587285 | 4.4:-78693873 | None:intergenic |
| TGAGCATTTGAACCTTTCAA+AGG | 0.596975 | 4.4:+78694521 | MS.gene50365:CDS |
| CTGCTTGTGGAAGTATTGAG+TGG | 0.603126 | 4.4:+78694553 | MS.gene50365:CDS |
| TCATCAATGCCATACCAAGA+AGG | 0.605775 | 4.4:-78695452 | None:intergenic |
| GGATGCACAGGGAATTAATG+AGG | 0.609838 | 4.4:+78695794 | MS.gene50365:CDS |
| GACCAGCAATGCTCGCACCC+AGG | 0.617619 | 4.4:+78695502 | MS.gene50365:CDS |
| CAACTCATGCTAGTATAAGT+GGG | 0.625213 | 4.4:+78695773 | MS.gene50365:CDS |
| ATATCAAAGCTACCTGCCCA+AGG | 0.629869 | 4.4:-78698007 | None:intergenic |
| TTTATGATTTCAGAAAAGAG+TGG | 0.640500 | 4.4:+78698386 | MS.gene50365:CDS |
| TAGTATAAGTGGGATGCACA+GGG | 0.644916 | 4.4:+78695783 | MS.gene50365:CDS |
| GTAAAATGGATCTTGAGCTG+AGG | 0.647163 | 4.4:-78693874 | None:intergenic |
| GTCTAACCAATATGCCTCTG+GGG | 0.647453 | 4.4:+78695846 | MS.gene50365:CDS |
| AAGTGGAGATTGAAAACCGG+AGG | 0.652309 | 4.4:+78695474 | MS.gene50365:CDS |
| GAAAAGATTCTAGATGAACT+GGG | 0.658756 | 4.4:+78698209 | MS.gene50365:CDS |
| TTAAGTGTACAGAGAATCGG+AGG | 0.688868 | 4.4:+78697957 | MS.gene50365:CDS |
| GCGCACAATTAAGAGAACAG+TGG | 0.704934 | 4.4:+78695726 | MS.gene50365:CDS |
| TGAAGAAGGCCAGTGCAAAG+GGG | 0.733851 | 4.4:+78698418 | MS.gene50365:CDS |
| GAAATCATCATTATCCCCAG+AGG | 0.750638 | 4.4:-78695860 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGTAAATATCATTAT+TGG | + | chr4.4:78694882-78694901 | MS.gene50365:intron | 10.0% |
| !! | TTCATTATCAATTATTATTT+GGG | + | chr4.4:78694404-78694423 | MS.gene50365:intron | 10.0% |
| !!! | TATAATATTTTCATAGTTTA+GGG | - | chr4.4:78695081-78695100 | None:intergenic | 10.0% |
| !!! | TTATAATATTTTCATAGTTT+AGG | - | chr4.4:78695082-78695101 | None:intergenic | 10.0% |
| !!! | TTTGTCATTTTTTTTATATT+AGG | + | chr4.4:78697689-78697708 | MS.gene50365:intron | 10.0% |
| !! | AGTAACTTTAACATAAATAT+AGG | + | chr4.4:78696351-78696370 | MS.gene50365:intron | 15.0% |
| !! | CTTCATTATCAATTATTATT+TGG | + | chr4.4:78694403-78694422 | MS.gene50365:intron | 15.0% |
| !!! | ATTTTATGGTTTTTTTTATG+TGG | + | chr4.4:78694441-78694460 | MS.gene50365:intron | 15.0% |
| !!! | ATTTTGAAACAAAATATGTT+TGG | + | chr4.4:78696425-78696444 | MS.gene50365:intron | 15.0% |
| !!! | CAAATAATAATTGATAATGA+AGG | - | chr4.4:78694405-78694424 | None:intergenic | 15.0% |
| !!! | TTTTATAATGTGATATTTAC+TGG | + | chr4.4:78697894-78697913 | MS.gene50365:intron | 15.0% |
| !!! | TTTTGAAACAAAATATGTTT+GGG | + | chr4.4:78696426-78696445 | MS.gene50365:intron | 15.0% |
| !! | AAACAATATAACTGAAATAG+TGG | + | chr4.4:78696266-78696285 | MS.gene50365:intron | 20.0% |
| !! | AAATATGTTTGGGTAAAATA+CGG | + | chr4.4:78696436-78696455 | MS.gene50365:intron | 20.0% |
| !! | AACAAATGTTGTTCATTAAT+AGG | + | chr4.4:78695702-78695721 | MS.gene50365:intron | 20.0% |
| !! | AATACAATGTTCAAGTATTT+AGG | + | chr4.4:78696379-78696398 | MS.gene50365:intron | 20.0% |
| !! | AATCAGAAAATGTATTTATG+TGG | - | chr4.4:78696511-78696530 | None:intergenic | 20.0% |
| !! | ATACTTTATAAGATGAAGAA+AGG | - | chr4.4:78695937-78695956 | None:intergenic | 20.0% |
| !! | ATGGTTTATTCAAAATAAGA+AGG | + | chr4.4:78695184-78695203 | MS.gene50365:intron | 20.0% |
| !! | ATTATAAAAATGACAACTTG+TGG | - | chr4.4:78697883-78697902 | None:intergenic | 20.0% |
| !! | CTATAGAAGATAAGAAAATT+GGG | + | chr4.4:78696305-78696324 | MS.gene50365:intron | 20.0% |
| !! | TACTTTATAAGATGAAGAAA+GGG | - | chr4.4:78695936-78695955 | None:intergenic | 20.0% |
| !! | TATATAATCAAAAAGCAACT+AGG | - | chr4.4:78697463-78697482 | None:intergenic | 20.0% |
| !! | TGGTTTATTCAAAATAAGAA+GGG | + | chr4.4:78695185-78695204 | MS.gene50365:intron | 20.0% |
| !! | TTCTTTAGCAAGAAAATTTA+AGG | + | chr4.4:78694822-78694841 | MS.gene50365:intron | 20.0% |
| !!! | AAATGTATTTATGTGGTTTT+TGG | - | chr4.4:78696504-78696523 | None:intergenic | 20.0% |
| !!! | AATGGAAAACTTTATTTTCT+TGG | - | chr4.4:78695651-78695670 | None:intergenic | 20.0% |
| !!! | AATTGTTTTACTTTGTTTGT+GGG | + | chr4.4:78697535-78697554 | MS.gene50365:intron | 20.0% |
| !!! | GTGTTAATTTTTTGATAGAA+AGG | + | chr4.4:78695388-78695407 | MS.gene50365:intron | 20.0% |
| !!! | TAATTGTTTTACTTTGTTTG+TGG | + | chr4.4:78697534-78697553 | MS.gene50365:intron | 20.0% |
| !!! | TGTGATTGATATTGATTTTA+TGG | + | chr4.4:78694427-78694446 | MS.gene50365:intron | 20.0% |
| !!! | TTAATTTTTTGATAGAAAGG+TGG | + | chr4.4:78695391-78695410 | MS.gene50365:intron | 20.0% |
| !!! | TTGATTGATGATAGAAAATT+GGG | + | chr4.4:78697509-78697528 | MS.gene50365:intron | 20.0% |
| !!! | TTTAGAATTTCAAAAGTTTG+AGG | - | chr4.4:78697196-78697215 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGGTTACAAA+AGG | - | chr4.4:78695641-78695660 | None:intergenic | 20.0% |
| !!! | TTTGATTGATGATAGAAAAT+TGG | + | chr4.4:78697508-78697527 | MS.gene50365:intron | 20.0% |
| ! | AAAATACATTGACCAAATTG+TGG | - | chr4.4:78694614-78694633 | None:intergenic | 25.0% |
| ! | AAGAAAAAATCAATGCAAAC+AGG | - | chr4.4:78696885-78696904 | None:intergenic | 25.0% |
| ! | AATTAATGGTTTCTGATTGA+TGG | + | chr4.4:78695165-78695184 | MS.gene50365:intron | 25.0% |
| ! | ACACAACAAAAATATGCATA+AGG | - | chr4.4:78696976-78696995 | None:intergenic | 25.0% |
| ! | ACGAAGTTTCAAATACTAAA+GGG | - | chr4.4:78695110-78695129 | None:intergenic | 25.0% |
| ! | AGAAAAAATCAATGCAAACA+GGG | - | chr4.4:78696884-78696903 | None:intergenic | 25.0% |
| ! | AGAACAAAGGATATATACAA+AGG | - | chr4.4:78697589-78697608 | None:intergenic | 25.0% |
| ! | AGATAAAAAGGAAAATGAAC+AGG | - | chr4.4:78698476-78698495 | None:intergenic | 25.0% |
| ! | AGTAAAATAACTTCTGAACA+TGG | - | chr4.4:78694790-78694809 | None:intergenic | 25.0% |
| ! | ATGATATCAAACTCCAATTA+TGG | + | chr4.4:78696001-78696020 | MS.gene50365:intron | 25.0% |
| ! | ATGTGCACAAATTCTATTTA+AGG | - | chr4.4:78695977-78695996 | None:intergenic | 25.0% |
| ! | CAACATTAAAACAATTAGCA+AGG | - | chr4.4:78696221-78696240 | None:intergenic | 25.0% |
| ! | CATCAACAAAAATAAGAACT+GGG | - | chr4.4:78694328-78694347 | None:intergenic | 25.0% |
| ! | CATCAATAGAAATAGGAATT+GGG | - | chr4.4:78694122-78694141 | None:intergenic | 25.0% |
| ! | CCTATAGAAGATAAGAAAAT+TGG | + | chr4.4:78696304-78696323 | MS.gene50365:intron | 25.0% |
| ! | GATAAAAAGGAAAATGAACA+GGG | - | chr4.4:78698475-78698494 | None:intergenic | 25.0% |
| ! | GATACAATCAAAGAAAAACA+AGG | - | chr4.4:78695005-78695024 | None:intergenic | 25.0% |
| ! | GTAAAAACAAGATAGAACAA+AGG | - | chr4.4:78697602-78697621 | None:intergenic | 25.0% |
| ! | GTAAAATAACTTCTGAACAT+GGG | - | chr4.4:78694789-78694808 | None:intergenic | 25.0% |
| ! | TAAATGAACAGCTGTATATT+AGG | - | chr4.4:78695587-78695606 | None:intergenic | 25.0% |
| ! | TACATTGCATCAATAGAAAT+AGG | - | chr4.4:78694129-78694148 | None:intergenic | 25.0% |
| ! | TGAAGAATACCAAGATAAAA+AGG | - | chr4.4:78698488-78698507 | None:intergenic | 25.0% |
| ! | TTTATGATTTCAGAAAAGAG+TGG | + | chr4.4:78698386-78698405 | MS.gene50365:CDS | 25.0% |
| ! | TTTATTCAAAATAAGAAGGG+TGG | + | chr4.4:78695188-78695207 | MS.gene50365:intron | 25.0% |
| ! | TTTATTTATTCCTCCAACAT+TGG | + | chr4.4:78694648-78694667 | MS.gene50365:intron | 25.0% |
| !! | ACTAATTTGTATACCAATGT+TGG | - | chr4.4:78694664-78694683 | None:intergenic | 25.0% |
| !! | CCAATTTTCTTATCTTCTAT+AGG | - | chr4.4:78696307-78696326 | None:intergenic | 25.0% |
| !! | GCAATCTAATTTTCATCAAT+GGG | + | chr4.4:78694479-78694498 | MS.gene50365:CDS | 25.0% |
| !! | GTTCATTTTCCTTTTTATCT+TGG | + | chr4.4:78698476-78698495 | MS.gene50365:CDS | 25.0% |
| !! | TGCAATCTAATTTTCATCAA+TGG | + | chr4.4:78694478-78694497 | MS.gene50365:CDS | 25.0% |
| !! | TTTAGTATTTGAAACTTCGT+CGG | + | chr4.4:78695110-78695129 | MS.gene50365:intron | 25.0% |
| !! | TTTGTTGAGATATAGCTTTT+GGG | + | chr4.4:78696932-78696951 | MS.gene50365:intron | 25.0% |
| !! | TTTTGTTGAGATATAGCTTT+TGG | + | chr4.4:78696931-78696950 | MS.gene50365:intron | 25.0% |
| !!! | ACCCAATTTTGAAAAAGTTA+AGG | + | chr4.4:78696474-78696493 | MS.gene50365:intron | 25.0% |
| !!! | ATTGTTTTACTTTGTTTGTG+GGG | + | chr4.4:78697536-78697555 | MS.gene50365:intron | 25.0% |
| !!! | CCCAATTTTGAAAAAGTTAA+GGG | + | chr4.4:78696475-78696494 | MS.gene50365:intron | 25.0% |
| !!! | CCCTTAACTTTTTCAAAATT+GGG | - | chr4.4:78696478-78696497 | None:intergenic | 25.0% |
| !!! | CTATCTGATTTTAATATTGC+TGG | + | chr4.4:78698299-78698318 | MS.gene50365:intron | 25.0% |
| !!! | TACAAAAAAGTGTCCATAAT+TGG | - | chr4.4:78696017-78696036 | None:intergenic | 25.0% |
| !!! | TCCCTTAACTTTTTCAAAAT+TGG | - | chr4.4:78696479-78696498 | None:intergenic | 25.0% |
| !!! | TGCATTGATTTTTTCTTACT+TGG | + | chr4.4:78696888-78696907 | MS.gene50365:intron | 25.0% |
| AATAAGAAGGGTGGTAAAAA+TGG | + | chr4.4:78695197-78695216 | MS.gene50365:intron | 30.0% | |
| AATATCAGGGACTGAATTAA+TGG | + | chr4.4:78695151-78695170 | MS.gene50365:intron | 30.0% | |
| AATCAAAGAAAAACAAGGCT+GGG | - | chr4.4:78695000-78695019 | None:intergenic | 30.0% | |
| AATCTCTCAGCAATAAAATC+AGG | - | chr4.4:78698151-78698170 | None:intergenic | 30.0% | |
| AATTCAATGCACAATCAGAT+TGG | - | chr4.4:78694023-78694042 | None:intergenic | 30.0% | |
| AATTTGTATACCAATGTTGG+AGG | - | chr4.4:78694661-78694680 | None:intergenic | 30.0% | |
| ACAATGTTCAAGTATTTAGG+TGG | + | chr4.4:78696382-78696401 | MS.gene50365:intron | 30.0% | |
| ACAATTTATTGCAAGCACAA+AGG | - | chr4.4:78696127-78696146 | None:intergenic | 30.0% | |
| ACCTATGTCAAACTTTAACA+AGG | + | chr4.4:78695532-78695551 | MS.gene50365:intron | 30.0% | |
| AGTTATTAAACACGCACTTA+AGG | + | chr4.4:78694714-78694733 | MS.gene50365:intron | 30.0% | |
| AGTTTAAGTGTACAGAGAAT+CGG | + | chr4.4:78697954-78697973 | MS.gene50365:CDS | 30.0% | |
| ATCGACAGAAAATAAGAACT+GGG | - | chr4.4:78694275-78694294 | None:intergenic | 30.0% | |
| CACACAACAAAAATACAACA+AGG | - | chr4.4:78697005-78697024 | None:intergenic | 30.0% | |
| CGGAAAAGTTTGAAAAAAAG+AGG | - | chr4.4:78697331-78697350 | None:intergenic | 30.0% | |
| CTAAATCATGCAGAGATAAT+CGG | - | chr4.4:78697351-78697370 | None:intergenic | 30.0% | |
| CTTGGTTGTAAATGCAAAAA+GGG | + | chr4.4:78698527-78698546 | MS.gene50365:CDS | 30.0% | |
| CTTTATACTACACTGTTGAA+TGG | + | chr4.4:78697400-78697419 | MS.gene50365:intron | 30.0% | |
| GAAAAGATTCTAGATGAACT+GGG | + | chr4.4:78698209-78698228 | MS.gene50365:CDS | 30.0% | |
| GAAAGGAAATCTAATATCTG+TGG | - | chr4.4:78695619-78695638 | None:intergenic | 30.0% | |
| GACGAAGTTTCAAATACTAA+AGG | - | chr4.4:78695111-78695130 | None:intergenic | 30.0% | |
| GCATCAACAAAAATAAGAAC+TGG | - | chr4.4:78694329-78694348 | None:intergenic | 30.0% | |
| GCATCAATAGAAATAGGAAT+TGG | - | chr4.4:78694123-78694142 | None:intergenic | 30.0% | |
| GCTGGTAATAAAGATATGAA+TGG | + | chr4.4:78698317-78698336 | MS.gene50365:intron | 30.0% | |
| GGAAAGAATAGTATAAACTC+TGG | + | chr4.4:78696326-78696345 | MS.gene50365:intron | 30.0% | |
| GTGCATTGAATTTCAGTAAT+TGG | + | chr4.4:78694031-78694050 | MS.gene50365:intron | 30.0% | |
| TAGGTTAATTCATAGTAGAG+TGG | + | chr4.4:78697708-78697727 | MS.gene50365:intron | 30.0% | |
| TATCTCAACAAAAAAAGCCT+CGG | - | chr4.4:78696924-78696943 | None:intergenic | 30.0% | |
| TCATAGAATCAGAATCAGAT+AGG | + | chr4.4:78695881-78695900 | MS.gene50365:CDS | 30.0% | |
| TCCCTAACATCTTAATATCA+GGG | + | chr4.4:78695138-78695157 | MS.gene50365:intron | 30.0% | |
| TCCCTGATATTAAGATGTTA+GGG | - | chr4.4:78695142-78695161 | None:intergenic | 30.0% | |
| TCTTCTTTGACAACGTAAAA+TGG | - | chr4.4:78693891-78693910 | None:intergenic | 30.0% | |
| TCTTGGTTGTAAATGCAAAA+AGG | + | chr4.4:78698526-78698545 | MS.gene50365:CDS | 30.0% | |
| TGAGATGGAAAATATTCTCT+TGG | + | chr4.4:78696037-78696056 | MS.gene50365:intron | 30.0% | |
| TGCACAAATTCTATTTAAGG+TGG | - | chr4.4:78695974-78695993 | None:intergenic | 30.0% | |
| TGGATCAAGTAATAAAGTCA+TGG | - | chr4.4:78694003-78694022 | None:intergenic | 30.0% | |
| TTCTAACAATTGCGAAATGA+AGG | - | chr4.4:78693945-78693964 | None:intergenic | 30.0% | |
| TTTCTTGGTTACAAAAGGAA+AGG | - | chr4.4:78695636-78695655 | None:intergenic | 30.0% | |
| ! | ATCTTTTGTCTTCTCAAACT+TGG | - | chr4.4:78698555-78698574 | None:intergenic | 30.0% |
| ! | CATAATGGAAGCCTTAATTA+GGG | - | chr4.4:78697108-78697127 | None:intergenic | 30.0% |
| ! | GCACAAATTCTATTTAAGGT+GGG | - | chr4.4:78695973-78695992 | None:intergenic | 30.0% |
| ! | TCAAGTATTTAGGTGGTTTT+TGG | + | chr4.4:78696389-78696408 | MS.gene50365:intron | 30.0% |
| ! | TCATAATGGAAGCCTTAATT+AGG | - | chr4.4:78697109-78697128 | None:intergenic | 30.0% |
| ! | TTGTTGAGATATAGCTTTTG+GGG | + | chr4.4:78696933-78696952 | MS.gene50365:intron | 30.0% |
| ! | TTTTATGTGGCAAGATTGAT+AGG | + | chr4.4:78694454-78694473 | MS.gene50365:intron | 30.0% |
| !! | ATGCATATTTTTGTTGTGTG+TGG | + | chr4.4:78696977-78696996 | MS.gene50365:intron | 30.0% |
| !! | GTTGTATTTTTGTTGTGTGT+GGG | + | chr4.4:78697006-78697025 | MS.gene50365:intron | 30.0% |
| !! | TGACATAGGTTATTTTACCT+GGG | - | chr4.4:78695522-78695541 | None:intergenic | 30.0% |
| !! | TGATATTTACTGGTACTGAT+AGG | + | chr4.4:78697904-78697923 | MS.gene50365:intron | 30.0% |
| !! | TGCATATTTTTGTTGTGTGT+GGG | + | chr4.4:78696978-78696997 | MS.gene50365:intron | 30.0% |
| !! | TGTTGTATTTTTGTTGTGTG+TGG | + | chr4.4:78697005-78697024 | MS.gene50365:intron | 30.0% |
| !! | TTGACATAGGTTATTTTACC+TGG | - | chr4.4:78695523-78695542 | None:intergenic | 30.0% |
| AACAATTAGCAAGGATGACA+AGG | - | chr4.4:78696212-78696231 | None:intergenic | 35.0% | |
| AACTGTTTCGCATTACAACA+AGG | - | chr4.4:78697033-78697052 | None:intergenic | 35.0% | |
| ACAACTCATGCTAGTATAAG+TGG | + | chr4.4:78695772-78695791 | MS.gene50365:CDS | 35.0% | |
| ACTTAAGGTATGTCTGAGTT+TGG | + | chr4.4:78694729-78694748 | MS.gene50365:intron | 35.0% | |
| AGCATTGCTAATATTTGACG+TGG | + | chr4.4:78695323-78695342 | MS.gene50365:intron | 35.0% | |
| AGTTTGAACAGATTGTATCG+CGG | - | chr4.4:78695360-78695379 | None:intergenic | 35.0% | |
| ATCAAAGAAAAACAAGGCTG+GGG | - | chr4.4:78694999-78695018 | None:intergenic | 35.0% | |
| ATCTCAACAAAAAAAGCCTC+GGG | - | chr4.4:78696923-78696942 | None:intergenic | 35.0% | |
| ATGAAGTGGAGATTGAAAAC+CGG | + | chr4.4:78695471-78695490 | MS.gene50365:CDS | 35.0% | |
| ATGCTTAACATGTGTGATAG+AGG | - | chr4.4:78695308-78695327 | None:intergenic | 35.0% | |
| ATGGAGTCTAGTGAAAATGT+TGG | + | chr4.4:78695216-78695235 | MS.gene50365:intron | 35.0% | |
| ATTTCAGAAAAGAGTGGCAA+TGG | + | chr4.4:78698392-78698411 | MS.gene50365:CDS | 35.0% | |
| CAACTCATGCTAGTATAAGT+GGG | + | chr4.4:78695773-78695792 | MS.gene50365:CDS | 35.0% | |
| CAAGACATTCAGATATGACT+AGG | - | chr4.4:78698511-78698530 | None:intergenic | 35.0% | |
| CAATCAAAGAAAAACAAGGC+TGG | - | chr4.4:78695001-78695020 | None:intergenic | 35.0% | |
| CAGATAGCAAAATCGAAAAG+TGG | - | chr4.4:78698286-78698305 | None:intergenic | 35.0% | |
| CAGCAGATAAAGAAAAGGAA+TGG | - | chr4.4:78695669-78695688 | None:intergenic | 35.0% | |
| CATAGTTACAGATCAGAACT+GGG | - | chr4.4:78694380-78694399 | None:intergenic | 35.0% | |
| CATCGACAGAAAATAAGAAC+TGG | - | chr4.4:78694276-78694295 | None:intergenic | 35.0% | |
| CTAGTCATATCTGAATGTCT+TGG | + | chr4.4:78698509-78698528 | MS.gene50365:CDS | 35.0% | |
| CTTCAGTTGAAAACACTTGA+AGG | - | chr4.4:78698106-78698125 | None:intergenic | 35.0% | |
| GGAAAAGATTCTAGATGAAC+TGG | + | chr4.4:78698208-78698227 | MS.gene50365:intron | 35.0% | |
| GTCAAACTTTAACAAGGCTA+AGG | + | chr4.4:78695538-78695557 | MS.gene50365:intron | 35.0% | |
| GTCCCTAACATCTTAATATC+AGG | + | chr4.4:78695137-78695156 | MS.gene50365:intron | 35.0% | |
| GTCCCTGATATTAAGATGTT+AGG | - | chr4.4:78695143-78695162 | None:intergenic | 35.0% | |
| TAAAATGGATCTTGAGCTGA+GGG | - | chr4.4:78693876-78693895 | None:intergenic | 35.0% | |
| TACATTGACCAAATTGTGGA+AGG | - | chr4.4:78694610-78694629 | None:intergenic | 35.0% | |
| TACTGTTGAAAATCAACTGC+AGG | - | chr4.4:78697436-78697455 | None:intergenic | 35.0% | |
| TCAAAAGAGAATACGCATGA+TGG | - | chr4.4:78696573-78696592 | None:intergenic | 35.0% | |
| TCATAGTTACAGATCAGAAC+TGG | - | chr4.4:78694381-78694400 | None:intergenic | 35.0% | |
| TCATGCAGCAGATAAAGAAA+AGG | - | chr4.4:78695674-78695693 | None:intergenic | 35.0% | |
| TGAGCATTTGAACCTTTCAA+AGG | + | chr4.4:78694521-78694540 | MS.gene50365:CDS | 35.0% | |
| TGATAGAAAGGTGGATGAAT+TGG | + | chr4.4:78695400-78695419 | MS.gene50365:intron | 35.0% | |
| TGTCAAAATCTTGATGCTTC+AGG | + | chr4.4:78698187-78698206 | MS.gene50365:intron | 35.0% | |
| TTAAGGCTTCCATTATGAGT+TGG | + | chr4.4:78697111-78697130 | MS.gene50365:intron | 35.0% | |
| TTGGACAAAATCTAGACGAT+TGG | - | chr4.4:78698255-78698274 | None:intergenic | 35.0% | |
| ! | CAGATGATGATGATGATATG+CGG | + | chr4.4:78698441-78698460 | MS.gene50365:CDS | 35.0% |
| ! | GCCTTGTTAAAGTTTGACAT+AGG | - | chr4.4:78695536-78695555 | None:intergenic | 35.0% |
| ! | TGTTGAGATATAGCTTTTGG+GGG | + | chr4.4:78696934-78696953 | MS.gene50365:intron | 35.0% |
| ! | TTCAAAAGTTTGAGGTGCAT+GGG | - | chr4.4:78697188-78697207 | None:intergenic | 35.0% |
| ! | TTTACTTTGTTTGTGGGGTT+GGG | + | chr4.4:78697541-78697560 | MS.gene50365:intron | 35.0% |
| ! | TTTCAAAAGTTTGAGGTGCA+TGG | - | chr4.4:78697189-78697208 | None:intergenic | 35.0% |
| !! | GCTTTGAAAACTAGTAGACT+AGG | + | chr4.4:78698059-78698078 | MS.gene50365:intron | 35.0% |
| !! | TTTTACTTTGTTTGTGGGGT+TGG | + | chr4.4:78697540-78697559 | MS.gene50365:intron | 35.0% |
| !!! | GGACACTTTTTTGTATGAGA+TGG | + | chr4.4:78696022-78696041 | MS.gene50365:intron | 35.0% |
| AAAACAATGTCGCACAGGAA+CGG | - | chr4.4:78696673-78696692 | None:intergenic | 40.0% | |
| AAGTCTAACCAATATGCCTC+TGG | + | chr4.4:78695844-78695863 | MS.gene50365:CDS | 40.0% | |
| ACAATACATGAAGAGCTCCT+TGG | + | chr4.4:78697990-78698009 | MS.gene50365:CDS | 40.0% | |
| AGACTGAGAAACTGTATCGA+AGG | - | chr4.4:78696829-78696848 | None:intergenic | 40.0% | |
| AGATGAACTGGGAAATGAGA+TGG | + | chr4.4:78698220-78698239 | MS.gene50365:CDS | 40.0% | |
| AGCACAAAGGATCTTACATC+TGG | - | chr4.4:78696114-78696133 | None:intergenic | 40.0% | |
| AGTCTAACCAATATGCCTCT+GGG | + | chr4.4:78695845-78695864 | MS.gene50365:CDS | 40.0% | |
| ATTAAGAGAACAGTGGAAGC+TGG | + | chr4.4:78695733-78695752 | MS.gene50365:CDS | 40.0% | |
| ATTATGCTCAACAGTGTGAC+TGG | + | chr4.4:78697252-78697271 | MS.gene50365:intron | 40.0% | |
| CAATACATGAAGAGCTCCTT+GGG | + | chr4.4:78697991-78698010 | MS.gene50365:CDS | 40.0% | |
| CAGCAAGAACTTCCTTTGAA+AGG | - | chr4.4:78694536-78694555 | None:intergenic | 40.0% | |
| GAAATCATCATTATCCCCAG+AGG | - | chr4.4:78695863-78695882 | None:intergenic | 40.0% | |
| GACGTACTTTGATGAGAATC+TGG | - | chr4.4:78695823-78695842 | None:intergenic | 40.0% | |
| GGAGTTTAATCTAGATCAGC+CGG | + | chr4.4:78694750-78694769 | MS.gene50365:intron | 40.0% | |
| GTAAAATGGATCTTGAGCTG+AGG | - | chr4.4:78693877-78693896 | None:intergenic | 40.0% | |
| GTCCACAGTTGTTCCATTTA+CGG | + | chr4.4:78696642-78696661 | MS.gene50365:intron | 40.0% | |
| TAGCATCTAGAGATCCTTCT+TGG | + | chr4.4:78695438-78695457 | MS.gene50365:CDS | 40.0% | |
| TAGTATAAGTGGGATGCACA+GGG | + | chr4.4:78695783-78695802 | MS.gene50365:CDS | 40.0% | |
| TAGTGAAGCCTTCCACAATT+TGG | + | chr4.4:78694599-78694618 | MS.gene50365:intron | 40.0% | |
| TATCATCGCTTGCATGAACT+GGG | + | chr4.4:78694684-78694703 | MS.gene50365:intron | 40.0% | |
| TCAATGCAAACAGGGTAACA+TGG | - | chr4.4:78696876-78696895 | None:intergenic | 40.0% | |
| TCATCAATGCCATACCAAGA+AGG | - | chr4.4:78695455-78695474 | None:intergenic | 40.0% | |
| TCGAAAAGTGGAAACTCACT+TGG | - | chr4.4:78698274-78698293 | None:intergenic | 40.0% | |
| TCTAGAGATCCTTCTTGGTA+TGG | + | chr4.4:78695443-78695462 | MS.gene50365:CDS | 40.0% | |
| TGCATCTCATGTTTAAGCCA+GGG | + | chr4.4:78697073-78697092 | MS.gene50365:intron | 40.0% | |
| TGGGAAAACACTTCTGATAC+TGG | + | chr4.4:78694498-78694517 | MS.gene50365:CDS | 40.0% | |
| TTAACATGTGTGATAGAGGC+TGG | - | chr4.4:78695304-78695323 | None:intergenic | 40.0% | |
| TTAAGTGTACAGAGAATCGG+AGG | + | chr4.4:78697957-78697976 | MS.gene50365:CDS | 40.0% | |
| TTATCATCGCTTGCATGAAC+TGG | + | chr4.4:78694683-78694702 | MS.gene50365:intron | 40.0% | |
| ! | AATGCGAAACAGTTGCTGTT+TGG | + | chr4.4:78697039-78697058 | MS.gene50365:intron | 40.0% |
| ! | ATTAGGGAACCTTCTAGGAA+TGG | + | chr4.4:78697841-78697860 | MS.gene50365:intron | 40.0% |
| ! | TCCATTATGAGTTGGCAGTA+GGG | + | chr4.4:78697119-78697138 | MS.gene50365:intron | 40.0% |
| ! | TTCCATTATGAGTTGGCAGT+AGG | + | chr4.4:78697118-78697137 | MS.gene50365:intron | 40.0% |
| ! | TTTTCACCTTTCCTACCACA+GGG | - | chr4.4:78695032-78695051 | None:intergenic | 40.0% |
| ! | TTTTTCACCTTTCCTACCAC+AGG | - | chr4.4:78695033-78695052 | None:intergenic | 40.0% |
| !! | TTGGTATGGCATTGATGAAG+TGG | + | chr4.4:78695457-78695476 | MS.gene50365:CDS | 40.0% |
| AAAGAAAAACAAGGCTGGGG+AGG | - | chr4.4:78694996-78695015 | None:intergenic | 45.0% | |
| AAGTGGAGATTGAAAACCGG+AGG | + | chr4.4:78695474-78695493 | MS.gene50365:CDS | 45.0% | |
| AGAACAGTGGAAGCTGGAAA+GGG | + | chr4.4:78695739-78695758 | MS.gene50365:CDS | 45.0% | |
| ATATCAAAGCTACCTGCCCA+AGG | - | chr4.4:78698010-78698029 | None:intergenic | 45.0% | |
| ATCTCATGTTTAAGCCAGGG+AGG | + | chr4.4:78697076-78697095 | MS.gene50365:intron | 45.0% | |
| ATGAAGAAGGCCAGTGCAAA+GGG | + | chr4.4:78698417-78698436 | MS.gene50365:CDS | 45.0% | |
| CAACTGTGGACGAACCAAAA+TGG | - | chr4.4:78696633-78696652 | None:intergenic | 45.0% | |
| CTAGTATAAGTGGGATGCAC+AGG | + | chr4.4:78695782-78695801 | MS.gene50365:CDS | 45.0% | |
| CTGCATCTCATGTTTAAGCC+AGG | + | chr4.4:78697072-78697091 | MS.gene50365:intron | 45.0% | |
| GATGATGATATGCGGTTTGC+TGG | + | chr4.4:78698449-78698468 | MS.gene50365:CDS | 45.0% | |
| GCGCACAATTAAGAGAACAG+TGG | + | chr4.4:78695726-78695745 | MS.gene50365:CDS | 45.0% | |
| GGAGGGTGATTCCCTAATTA+AGG | + | chr4.4:78697094-78697113 | MS.gene50365:intron | 45.0% | |
| GGATGCACAGGGAATTAATG+AGG | + | chr4.4:78695794-78695813 | MS.gene50365:CDS | 45.0% | |
| GGTCGATACAGTGAAGGTTA+AGG | - | chr4.4:78696774-78696793 | None:intergenic | 45.0% | |
| GTAGACTAAGTGTGTGCTTG+TGG | - | chr4.4:78695265-78695284 | None:intergenic | 45.0% | |
| GTCTAACCAATATGCCTCTG+GGG | + | chr4.4:78695846-78695865 | MS.gene50365:CDS | 45.0% | |
| GTTTAATCTAGATCAGCCGG+AGG | + | chr4.4:78694753-78694772 | MS.gene50365:intron | 45.0% | |
| TAAGTGTGTGCTTGTGGAGT+TGG | - | chr4.4:78695259-78695278 | None:intergenic | 45.0% | |
| TACTTGGCATTGTTATCCCG+AGG | + | chr4.4:78696904-78696923 | MS.gene50365:intron | 45.0% | |
| TCCCTACTGCCAACTCATAA+TGG | - | chr4.4:78697123-78697142 | None:intergenic | 45.0% | |
| TCTCATGTTTAAGCCAGGGA+GGG | + | chr4.4:78697077-78697096 | MS.gene50365:intron | 45.0% | |
| TTGATTGTATCCCTTCCCTG+TGG | + | chr4.4:78695014-78695033 | MS.gene50365:intron | 45.0% | |
| ! | AAGGAAGTTCTTGCTGCTTG+TGG | + | chr4.4:78694540-78694559 | MS.gene50365:CDS | 45.0% |
| ! | AGTGGCAATGGTGATGAAGA+AGG | + | chr4.4:78698404-78698423 | MS.gene50365:CDS | 45.0% |
| ! | CATTATCCCCAGAGGCATAT+TGG | - | chr4.4:78695855-78695874 | None:intergenic | 45.0% |
| ! | TATGAGTTGGCAGTAGGGAA+GGG | + | chr4.4:78697124-78697143 | MS.gene50365:intron | 45.0% |
| ! | TTATGAGTTGGCAGTAGGGA+AGG | + | chr4.4:78697123-78697142 | MS.gene50365:intron | 45.0% |
| !! | CTGCTTGTGGAAGTATTGAG+TGG | + | chr4.4:78694553-78694572 | MS.gene50365:CDS | 45.0% |
| !! | TAAAGCGTCGCACACAATGA+AGG | - | chr4.4:78696803-78696822 | None:intergenic | 45.0% |
| !! | TGAGATATAGCTTTTGGGGG+TGG | + | chr4.4:78696937-78696956 | MS.gene50365:intron | 45.0% |
| !! | TTGTGGAAGTATTGAGTGGC+AGG | + | chr4.4:78694557-78694576 | MS.gene50365:CDS | 45.0% |
| !! | TTGTGGGGTTGGGTTTGTTT+TGG | + | chr4.4:78697551-78697570 | MS.gene50365:intron | 45.0% |
| AACAGAAAACCACCCGAACG+AGG | + | chr4.4:78697817-78697836 | MS.gene50365:intron | 50.0% | |
| AATTAGGGAATCACCCTCCC+TGG | - | chr4.4:78697093-78697112 | None:intergenic | 50.0% | |
| ACCTTTCCTACCACAGGGAA+GGG | - | chr4.4:78695027-78695046 | None:intergenic | 50.0% | |
| ACGAACCAAAATGGCAGGGA+GGG | - | chr4.4:78696624-78696643 | None:intergenic | 50.0% | |
| AGATTGAAAACCGGAGGAGG+TGG | + | chr4.4:78695480-78695499 | MS.gene50365:CDS | 50.0% | |
| AGGAACGTTGCTCACAGGAA+AGG | - | chr4.4:78696723-78696742 | None:intergenic | 50.0% | |
| AGGTTCCCTAATGCCTCGTT+CGG | - | chr4.4:78697833-78697852 | None:intergenic | 50.0% | |
| CATGGGAAGATCACTTCCTC+CGG | - | chr4.4:78694772-78694791 | None:intergenic | 50.0% | |
| CGCCGTAAATGGAACAACTG+TGG | - | chr4.4:78696647-78696666 | None:intergenic | 50.0% | |
| GAGAACAGTGGAAGCTGGAA+AGG | + | chr4.4:78695738-78695757 | MS.gene50365:CDS | 50.0% | |
| GATGAAGAAGGCCAGTGCAA+AGG | + | chr4.4:78698416-78698435 | MS.gene50365:CDS | 50.0% | |
| GCGCAAAAACAATGTCGCAC+AGG | - | chr4.4:78696678-78696697 | None:intergenic | 50.0% | |
| GTCGCACACAATGAAGGCTA+GGG | - | chr4.4:78696797-78696816 | None:intergenic | 50.0% | |
| GTGGACGAACCAAAATGGCA+GGG | - | chr4.4:78696628-78696647 | None:intergenic | 50.0% | |
| TCGCACACAATGAAGGCTAG+GGG | - | chr4.4:78696796-78696815 | None:intergenic | 50.0% | |
| TGAAGAAGGCCAGTGCAAAG+GGG | + | chr4.4:78698418-78698437 | MS.gene50365:CDS | 50.0% | |
| TGGAGATTGAAAACCGGAGG+AGG | + | chr4.4:78695477-78695496 | MS.gene50365:CDS | 50.0% | |
| TGTGGACGAACCAAAATGGC+AGG | - | chr4.4:78696629-78696648 | None:intergenic | 50.0% | |
| TTGTATCCCTTCCCTGTGGT+AGG | + | chr4.4:78695018-78695037 | MS.gene50365:intron | 50.0% | |
| ! | AAGGTTAAGGCATCACGAGC+AGG | - | chr4.4:78696761-78696780 | None:intergenic | 50.0% |
| ! | AGGTTAAGGCATCACGAGCA+GGG | - | chr4.4:78696760-78696779 | None:intergenic | 50.0% |
| ! | GAGGCATTAGGGAACCTTCT+AGG | + | chr4.4:78697836-78697855 | MS.gene50365:intron | 50.0% |
| ! | GTACAGAGAATCGGAGGTGT+TGG | + | chr4.4:78697963-78697982 | MS.gene50365:CDS | 50.0% |
| !! | AACAGTTGCTGTTTGGCCGT+TGG | + | chr4.4:78697046-78697065 | MS.gene50365:intron | 50.0% |
| !! | AATGACCCTCCCTGCCATTT+TGG | + | chr4.4:78696616-78696635 | MS.gene50365:intron | 50.0% |
| !! | ACAGGAAAGGCATCACTGAC+AGG | - | chr4.4:78696710-78696729 | None:intergenic | 50.0% |
| !! | ACAGTTGCTGTTTGGCCGTT+GGG | + | chr4.4:78697047-78697066 | MS.gene50365:intron | 50.0% |
| !! | TACTGGTACTGATAGGCAGC+AGG | + | chr4.4:78697911-78697930 | MS.gene50365:intron | 50.0% |
| AAAAACAAGGCTGGGGAGGC+GGG | - | chr4.4:78694992-78695011 | None:intergenic | 55.0% | |
| AACAGGGTAACATGGAGCGC+AGG | - | chr4.4:78696868-78696887 | None:intergenic | 55.0% | |
| ACAATGTCGCACAGGAACGG+TGG | - | chr4.4:78696670-78696689 | None:intergenic | 55.0% | |
| ACATGAAGAGCTCCTTGGGC+AGG | + | chr4.4:78697995-78698014 | MS.gene50365:CDS | 55.0% | |
| ACATGAGATGCAGCCCCCAA+CGG | - | chr4.4:78697065-78697084 | None:intergenic | 55.0% | |
| CACCTTTCCTACCACAGGGA+AGG | - | chr4.4:78695028-78695047 | None:intergenic | 55.0% | |
| CATCATCTGCCCCTTTGCAC+TGG | - | chr4.4:78698430-78698449 | None:intergenic | 55.0% | |
| CATGTGTGATAGAGGCTGGC+AGG | - | chr4.4:78695300-78695319 | None:intergenic | 55.0% | |
| CGCACACAATGAAGGCTAGG+GGG | - | chr4.4:78696795-78696814 | None:intergenic | 55.0% | |
| CGTCGCACACAATGAAGGCT+AGG | - | chr4.4:78696798-78696817 | None:intergenic | 55.0% | |
| CTAGGGGGTCGATACAGTGA+AGG | - | chr4.4:78696780-78696799 | None:intergenic | 55.0% | |
| GAAAAACAAGGCTGGGGAGG+CGG | - | chr4.4:78694993-78695012 | None:intergenic | 55.0% | |
| GACGAACCAAAATGGCAGGG+AGG | - | chr4.4:78696625-78696644 | None:intergenic | 55.0% | |
| GGTAACATGGAGCGCAGGAA+GGG | - | chr4.4:78696863-78696882 | None:intergenic | 55.0% | |
| GGTTCCCTAATGCCTCGTTC+GGG | - | chr4.4:78697832-78697851 | None:intergenic | 55.0% | |
| TACTGATAGGCAGCAGGACG+AGG | + | chr4.4:78697917-78697936 | MS.gene50365:intron | 55.0% | |
| TCCCTTCCCTGTGGTAGGAA+AGG | + | chr4.4:78695023-78695042 | MS.gene50365:intron | 55.0% | |
| TCCTGTGAGCAACGTTCCTG+CGG | + | chr4.4:78696724-78696743 | MS.gene50365:intron | 55.0% | |
| ! | AACCACCCGAACGAGGCATT+AGG | + | chr4.4:78697824-78697843 | MS.gene50365:intron | 55.0% |
| ! | ACCACCCGAACGAGGCATTA+GGG | + | chr4.4:78697825-78697844 | MS.gene50365:intron | 55.0% |
| ! | TAAGGCATCACGAGCAGGGA+AGG | - | chr4.4:78696756-78696775 | None:intergenic | 55.0% |
| !! | AGTTGCTGTTTGGCCGTTGG+GGG | + | chr4.4:78697049-78697068 | MS.gene50365:intron | 55.0% |
| !! | CAGTTGCTGTTTGGCCGTTG+GGG | + | chr4.4:78697048-78697067 | MS.gene50365:intron | 55.0% |
| AAAACAAGGCTGGGGAGGCG+GGG | - | chr4.4:78694991-78695010 | None:intergenic | 60.0% | |
| AGCGCAGGAAGGGAATGGTG+TGG | - | chr4.4:78696853-78696872 | None:intergenic | 60.0% | |
| AGGAACGGTGGCGCCGTAAA+TGG | - | chr4.4:78696658-78696677 | None:intergenic | 60.0% | |
| CATGGAGCGCAGGAAGGGAA+TGG | - | chr4.4:78696858-78696877 | None:intergenic | 60.0% | |
| CATTGCTGGTCCACCTCCTC+CGG | - | chr4.4:78695493-78695512 | None:intergenic | 60.0% | |
| CCTGTGAGCAACGTTCCTGC+GGG | + | chr4.4:78696725-78696744 | MS.gene50365:intron | 60.0% | |
| GGGTAACATGGAGCGCAGGA+AGG | - | chr4.4:78696864-78696883 | None:intergenic | 60.0% | |
| TAGGCAGCAGGACGAGGAGT+TGG | + | chr4.4:78697923-78697942 | MS.gene50365:intron | 60.0% | |
| TCCCTAATGCCTCGTTCGGG+TGG | - | chr4.4:78697829-78697848 | None:intergenic | 60.0% | |
| ! | TACCTGGGTGCGAGCATTGC+TGG | - | chr4.4:78695507-78695526 | None:intergenic | 60.0% |
| CCCGCAGGAACGTTGCTCAC+AGG | - | chr4.4:78696728-78696747 | None:intergenic | 65.0% | |
| GACCAGCAATGCTCGCACCC+AGG | + | chr4.4:78695502-78695521 | MS.gene50365:CDS | 65.0% | |
| AAGGCTGGGGAGGCGGGGAA+AGG | - | chr4.4:78694986-78695005 | None:intergenic | 70.0% | |
| GCAGGGAAGGCTGTGCCCGC+AGG | - | chr4.4:78696743-78696762 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 78693870 | 78698577 | 78693870 | ID=MS.gene50365 |
| chr4.4 | mRNA | 78693870 | 78698577 | 78693870 | ID=MS.gene50365.t1;Parent=MS.gene50365 |
| chr4.4 | exon | 78693870 | 78693923 | 78693870 | ID=MS.gene50365.t1.exon1;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78693870 | 78693923 | 78693870 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78694468 | 78694578 | 78694468 | ID=MS.gene50365.t1.exon2;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78694468 | 78694578 | 78694468 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78695410 | 78695523 | 78695410 | ID=MS.gene50365.t1.exon3;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78695410 | 78695523 | 78695410 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78695724 | 78695920 | 78695724 | ID=MS.gene50365.t1.exon4;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78695724 | 78695920 | 78695724 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78697926 | 78698016 | 78697926 | ID=MS.gene50365.t1.exon5;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78697926 | 78698016 | 78697926 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78698209 | 78698274 | 78698209 | ID=MS.gene50365.t1.exon6;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78698209 | 78698274 | 78698209 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| chr4.4 | exon | 78698368 | 78698577 | 78698368 | ID=MS.gene50365.t1.exon7;Parent=MS.gene50365.t1 |
| chr4.4 | CDS | 78698368 | 78698577 | 78698368 | ID=cds.MS.gene50365.t1;Parent=MS.gene50365.t1 |
| Gene Sequence |
| Protein sequence |
