Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065513.t1 | XP_027187359.1 | 85.2 | 263 | 23 | 2 | 1 | 263 | 1 | 247 | 2.40E-120 | 441.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065513.t1 | Q946Y7 | 68.4 | 212 | 63 | 3 | 1 | 211 | 1 | 209 | 3.8e-74 | 279.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065513.t1 | A0A3Q7X0P4 | 85.2 | 263 | 23 | 2 | 1 | 263 | 1 | 247 | 1.7e-120 | 441.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049208 | MS.gene065513 | 0.800208 | 1.61E-48 | -1.69E-46 |
| MS.gene049887 | MS.gene065513 | 0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene065513 | 0.851008 | 1.17E-60 | -1.69E-46 |
| MS.gene050838 | MS.gene065513 | 0.839294 | 1.73E-57 | -1.69E-46 |
| MS.gene050955 | MS.gene065513 | 0.829398 | 5.26E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene065513 | 0.826607 | 2.47E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene065513 | 0.824164 | 9.36E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene065513 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene065513 | 0.811605 | 6.44E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene065513 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene065513 | 0.822627 | 2.14E-53 | -1.69E-46 |
| MS.gene051902 | MS.gene065513 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene065513 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene065513 | 0.826587 | 2.50E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene065513 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene065513 | 0.813454 | 2.54E-51 | -1.69E-46 |
| MS.gene053045 | MS.gene065513 | 0.807316 | 5.36E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene065513 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene065513 | 0.849652 | 2.82E-60 | -1.69E-46 |
| MS.gene05469 | MS.gene065513 | 0.805014 | 1.64E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene065513 | 0.81045 | 1.15E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene065513 | 0.809957 | 1.46E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene065513 | 0.801288 | 9.66E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene065513 | 0.829061 | 6.35E-55 | -1.69E-46 |
| MS.gene057094 | MS.gene065513 | 0.80353 | 3.34E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene065513 | 0.830805 | 2.39E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene065513 | 0.805931 | 1.05E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene065513 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene065513 | 0.817446 | 3.28E-52 | -1.69E-46 |
| MS.gene058074 | MS.gene065513 | 0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene065513 | 0.802651 | 5.07E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene065513 | 0.808782 | 2.62E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene065513 | 0.814391 | 1.58E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene065513 | 0.822145 | 2.77E-53 | -1.69E-46 |
| MS.gene059227 | MS.gene065513 | 0.848282 | 6.77E-60 | -1.69E-46 |
| MS.gene06001 | MS.gene065513 | 0.811176 | 7.98E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene065513 | 0.829229 | 5.79E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056096 | MS.gene065513 | PPI |
| MS.gene013657 | MS.gene065513 | PPI |
| MS.gene033077 | MS.gene065513 | PPI |
| MS.gene005292 | MS.gene065513 | PPI |
| MS.gene78212 | MS.gene065513 | PPI |
| MS.gene063476 | MS.gene065513 | PPI |
| MS.gene052932 | MS.gene065513 | PPI |
| MS.gene44169 | MS.gene065513 | PPI |
| MS.gene044431 | MS.gene065513 | PPI |
| MS.gene77217 | MS.gene065513 | PPI |
| MS.gene69311 | MS.gene065513 | PPI |
| MS.gene40807 | MS.gene065513 | PPI |
| MS.gene65117 | MS.gene065513 | PPI |
| MS.gene44168 | MS.gene065513 | PPI |
| MS.gene056094 | MS.gene065513 | PPI |
| MS.gene072972 | MS.gene065513 | PPI |
| MS.gene02663 | MS.gene065513 | PPI |
| MS.gene66057 | MS.gene065513 | PPI |
| MS.gene81965 | MS.gene065513 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065513.t1 | MTR_5g092870 | 99.526 | 211 | 1 | 0 | 1 | 211 | 1 | 211 | 1.05e-154 | 432 |
| MS.gene065513.t1 | MTR_3g052210 | 77.251 | 211 | 44 | 2 | 1 | 211 | 1 | 207 | 2.35e-116 | 334 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065513.t1 | AT1G28490 | 68.396 | 212 | 63 | 3 | 1 | 211 | 1 | 209 | 5.22e-101 | 295 |
| MS.gene065513.t1 | AT1G28490 | 68.790 | 157 | 46 | 2 | 55 | 211 | 11 | 164 | 1.80e-70 | 216 |
| MS.gene065513.t1 | AT1G28490 | 68.790 | 157 | 46 | 2 | 55 | 211 | 17 | 170 | 4.16e-70 | 216 |
Find 67 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTTGACAACGTAAAA+TGG | 0.199042 | 5.2:+78347081 | None:intergenic |
| TCTTGGTTGTAAATGCAAAA+AGG | 0.254892 | 5.2:-78342550 | MS.gene065513:CDS |
| TTGAGAAGACAAAAGATTAA+TGG | 0.283480 | 5.2:-78342518 | None:intergenic |
| TACCTGGGTGCGAGCATTGC+TGG | 0.310121 | 5.2:+78345557 | None:intergenic |
| TGAAGAATACCAAGATAAAA+AGG | 0.311255 | 5.2:+78342591 | None:intergenic |
| GGAAAAGATTCTAGATGAAC+TGG | 0.327556 | 5.2:-78342865 | MS.gene065513:CDS |
| TGATAGAAAGGTGGATGAAT+TGG | 0.340172 | 5.2:-78345661 | MS.gene065513:intron |
| GACGTACTTTGATGAGAATC+TGG | 0.370989 | 5.2:+78345241 | None:intergenic |
| CATTATCCCCAGAGGCATAT+TGG | 0.373000 | 5.2:+78345209 | None:intergenic |
| GATGATGATATGCGGTTTGC+TGG | 0.373276 | 5.2:-78342627 | MS.gene065513:CDS |
| TAGCATCTAGAGATCCTTCT+TGG | 0.380240 | 5.2:-78345623 | MS.gene065513:CDS |
| TGGGAAAACACTTCTGATAC+TGG | 0.403074 | 5.2:-78346567 | MS.gene065513:CDS |
| CATTGCTGGTCCACCTCCTC+CGG | 0.425273 | 5.2:+78345571 | None:intergenic |
| CAATACATGAAGAGCTCCTT+GGG | 0.426328 | 5.2:-78343082 | MS.gene065513:CDS |
| AAGTCTAACCAATATGCCTC+TGG | 0.429106 | 5.2:-78345217 | MS.gene065513:CDS |
| ATGAAGAAGGCCAGTGCAAA+GGG | 0.430950 | 5.2:-78342656 | MS.gene065513:CDS |
| CATCATCTGCCCCTTTGCAC+TGG | 0.444110 | 5.2:+78342646 | None:intergenic |
| AGTTTAAGTGTACAGAGAAT+CGG | 0.466460 | 5.2:-78343119 | MS.gene065513:CDS |
| CAGCAAGAACTTCCTTTGAA+AGG | 0.473857 | 5.2:+78346532 | None:intergenic |
| TTGTGGAAGTATTGAGTGGC+AGG | 0.474925 | 5.2:-78346508 | MS.gene065513:intron |
| AAGGAAGTTCTTGCTGCTTG+TGG | 0.475725 | 5.2:-78346525 | MS.gene065513:CDS |
| CTAGTATAAGTGGGATGCAC+AGG | 0.476219 | 5.2:-78345279 | MS.gene065513:CDS |
| ACAATACATGAAGAGCTCCT+TGG | 0.478003 | 5.2:-78343083 | MS.gene065513:CDS |
| ACAACTCATGCTAGTATAAG+TGG | 0.493222 | 5.2:-78345289 | MS.gene065513:CDS |
| ATTAAGAGAACAGTGGAAGC+TGG | 0.496755 | 5.2:-78345328 | MS.gene065513:CDS |
| TCATAGAATCAGAATCAGAT+AGG | 0.505091 | 5.2:-78345180 | MS.gene065513:CDS |
| ATGAAGTGGAGATTGAAAAC+CGG | 0.508658 | 5.2:-78345590 | MS.gene065513:CDS |
| TACTGATAGGCAGCAGGACG+AGG | 0.512554 | 5.2:-78343156 | MS.gene065513:intron |
| GAGAACAGTGGAAGCTGGAA+AGG | 0.519334 | 5.2:-78345323 | MS.gene065513:CDS |
| ACATGAAGAGCTCCTTGGGC+AGG | 0.525155 | 5.2:-78343078 | MS.gene065513:intron |
| AGTCTAACCAATATGCCTCT+GGG | 0.528315 | 5.2:-78345216 | MS.gene065513:CDS |
| TAGGCAGCAGGACGAGGAGT+TGG | 0.528875 | 5.2:-78343150 | MS.gene065513:CDS |
| AGATTGAAAACCGGAGGAGG+TGG | 0.529877 | 5.2:-78345581 | MS.gene065513:CDS |
| TCGAAAAGCGGAAACTCACT+TGG | 0.531086 | 5.2:+78342802 | None:intergenic |
| TTGGACAAAATCTAGACGAT+TGG | 0.532143 | 5.2:+78342821 | None:intergenic |
| GTACAGAGAATCGGAGGTGT+TGG | 0.534643 | 5.2:-78343110 | MS.gene065513:CDS |
| TCTAGAGATCCTTCTTGGTA+TGG | 0.537717 | 5.2:-78345618 | MS.gene065513:CDS |
| AGATGAACTGGGAAATGAGA+TGG | 0.539156 | 5.2:-78342853 | MS.gene065513:CDS |
| CGAGCATTTGAACCTTTCAA+AGG | 0.540054 | 5.2:-78346544 | MS.gene065513:CDS |
| CTAGTCATATCTGAATGTCT+TGG | 0.543882 | 5.2:-78342567 | MS.gene065513:CDS |
| AGTGGCAATGGTGATGAAGA+AGG | 0.556318 | 5.2:-78342669 | MS.gene065513:CDS |
| ATTTCAGAAAAGAGTGGCAA+TGG | 0.560428 | 5.2:-78342681 | MS.gene065513:intron |
| TACTGGTACTGATAGGCAGC+AGG | 0.561867 | 5.2:-78343162 | MS.gene065513:intron |
| AGAACAGTGGAAGCTGGAAA+GGG | 0.568137 | 5.2:-78345322 | MS.gene065513:CDS |
| GATGAAGAAGGCCAGTGCAA+AGG | 0.571528 | 5.2:-78342657 | MS.gene065513:CDS |
| TGGAGATTGAAAACCGGAGG+AGG | 0.573238 | 5.2:-78345584 | MS.gene065513:CDS |
| TTGGTATGGCATTGATGAAG+TGG | 0.577534 | 5.2:-78345604 | MS.gene065513:CDS |
| CAAGACATTCAGATATGACT+AGG | 0.584511 | 5.2:+78342568 | None:intergenic |
| TAAAATGGATCTTGAGCTGA+GGG | 0.587285 | 5.2:+78347096 | None:intergenic |
| CTGCTTGTGGAAGTATTGAG+TGG | 0.603126 | 5.2:-78346512 | MS.gene065513:CDS |
| TCATCAATGCCATACCAAGA+AGG | 0.605775 | 5.2:+78345609 | None:intergenic |
| GGATGCACAGGGAATTAATG+AGG | 0.609838 | 5.2:-78345267 | MS.gene065513:CDS |
| CAGATAGCAAAATCGAAAAG+CGG | 0.613716 | 5.2:+78342790 | None:intergenic |
| GACCAGCAATGCTCGCACCC+AGG | 0.617619 | 5.2:-78345559 | MS.gene065513:intron |
| CAACTCATGCTAGTATAAGT+GGG | 0.625213 | 5.2:-78345288 | MS.gene065513:CDS |
| ATATCAAAGCTACCTGCCCA+AGG | 0.629869 | 5.2:+78343066 | None:intergenic |
| TTTATGATTTCAGAAAAGAG+TGG | 0.640500 | 5.2:-78342687 | MS.gene065513:intron |
| TAGTATAAGTGGGATGCACA+GGG | 0.644916 | 5.2:-78345278 | MS.gene065513:CDS |
| GTAAAATGGATCTTGAGCTG+AGG | 0.647163 | 5.2:+78347095 | None:intergenic |
| GTCTAACCAATATGCCTCTG+GGG | 0.647453 | 5.2:-78345215 | MS.gene065513:CDS |
| AAGTGGAGATTGAAAACCGG+AGG | 0.652309 | 5.2:-78345587 | MS.gene065513:CDS |
| GAAAAGATTCTAGATGAACT+GGG | 0.658756 | 5.2:-78342864 | MS.gene065513:CDS |
| TTAAGTGTACAGAGAATCGG+AGG | 0.688868 | 5.2:-78343116 | MS.gene065513:CDS |
| GCGCACAATTAAGAGAACAG+TGG | 0.704934 | 5.2:-78345335 | MS.gene065513:CDS |
| GGGCAGATGATGATGATATG+CGG | 0.718209 | 5.2:-78342635 | MS.gene065513:CDS |
| TGAAGAAGGCCAGTGCAAAG+GGG | 0.733851 | 5.2:-78342655 | MS.gene065513:CDS |
| GAAATCATCATTATCCCCAG+AGG | 0.750638 | 5.2:+78345201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGTAAATATCATTAT+TGG | - | chr5.2:78343437-78343456 | MS.gene065513:intron | 10.0% |
| !!! | TATAATATTTTCATAGTTTA+GGG | + | chr5.2:78343636-78343655 | None:intergenic | 10.0% |
| !!! | TTATAATATTTTCATAGTTT+AGG | + | chr5.2:78343637-78343656 | None:intergenic | 10.0% |
| !! | AGTAACTTTAACATAAATAT+AGG | - | chr5.2:78344910-78344929 | MS.gene065513:intron | 15.0% |
| !!! | AATACAATTTTCAAGTATTT+AGG | - | chr5.2:78344938-78344957 | MS.gene065513:intron | 15.0% |
| !!! | ATTTTGAAACAAAATATGTT+TGG | - | chr5.2:78344984-78345003 | MS.gene065513:intron | 15.0% |
| !!! | GTGTCAATTTTTTTTATATT+AGG | - | chr5.2:78346238-78346257 | MS.gene065513:intron | 15.0% |
| !!! | TTATGGTTTTTTTTTTTATG+TGG | - | chr5.2:78342996-78343015 | MS.gene065513:intron | 15.0% |
| !!! | TTTTATAATGTGATATTTAC+TGG | - | chr5.2:78346441-78346460 | MS.gene065513:intron | 15.0% |
| !!! | TTTTGAAACAAAATATGTTT+GGG | - | chr5.2:78344985-78345004 | MS.gene065513:intron | 15.0% |
| !! | AAACAATATAACTGAAATAG+TGG | - | chr5.2:78344825-78344844 | MS.gene065513:intron | 20.0% |
| !! | AAATATGTTTGGGTAAAATA+CGG | - | chr5.2:78344995-78345014 | MS.gene065513:intron | 20.0% |
| !! | AACAAATGTTGTTCATTAAT+AGG | - | chr5.2:78344261-78344280 | MS.gene065513:intron | 20.0% |
| !! | AATCAGAAAATGTATTTATG+TGG | + | chr5.2:78345070-78345089 | None:intergenic | 20.0% |
| !! | ATAAAATCATTATCAGAACT+GGG | + | chr5.2:78342980-78342999 | None:intergenic | 20.0% |
| !! | ATACTTTATAAGATGAAGAA+AGG | + | chr5.2:78344496-78344515 | None:intergenic | 20.0% |
| !! | ATGGTTTATTCAAAATAAGA+AGG | - | chr5.2:78343739-78343758 | MS.gene065513:intron | 20.0% |
| !! | ATTATAAAAATGACAACTTG+TGG | + | chr5.2:78346430-78346449 | None:intergenic | 20.0% |
| !! | TACTTTATAAGATGAAGAAA+GGG | + | chr5.2:78344495-78344514 | None:intergenic | 20.0% |
| !! | TATATAATCAAAAAGCAACT+AGG | + | chr5.2:78346022-78346041 | None:intergenic | 20.0% |
| !! | TGGTTTATTCAAAATAAGAA+GGG | - | chr5.2:78343740-78343759 | MS.gene065513:intron | 20.0% |
| !! | TTCTTTAGCAAGAAAATTTA+AGG | - | chr5.2:78343377-78343396 | MS.gene065513:intron | 20.0% |
| !!! | AAATGTATTTATGTGGTTTT+TGG | + | chr5.2:78345063-78345082 | None:intergenic | 20.0% |
| !!! | AATGGAAAACTTTATTTTCT+TGG | + | chr5.2:78344210-78344229 | None:intergenic | 20.0% |
| !!! | AATTGTTTTACTTTGTTTGT+GGG | - | chr5.2:78346094-78346113 | MS.gene065513:intron | 20.0% |
| !!! | GTGTTAATTTTTTGATAGAA+AGG | - | chr5.2:78343947-78343966 | MS.gene065513:intron | 20.0% |
| !!! | TAATTGTTTTACTTTGTTTG+TGG | - | chr5.2:78346093-78346112 | MS.gene065513:intron | 20.0% |
| !!! | TTAATTTTTTGATAGAAAGG+TGG | - | chr5.2:78343950-78343969 | MS.gene065513:intron | 20.0% |
| !!! | TTGATTGATGATAGAAAATT+GGG | - | chr5.2:78346068-78346087 | MS.gene065513:intron | 20.0% |
| !!! | TTTAGAATTTCAAAAGTTTG+AGG | + | chr5.2:78345755-78345774 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGGTTACAAA+AGG | + | chr5.2:78344200-78344219 | None:intergenic | 20.0% |
| !!! | TTTGATTGATGATAGAAAAT+TGG | - | chr5.2:78346067-78346086 | MS.gene065513:intron | 20.0% |
| ! | AAAATACATTGACCAAATTG+TGG | + | chr5.2:78343169-78343188 | None:intergenic | 25.0% |
| ! | AAGAAAAAATCAATGCAAAC+AGG | + | chr5.2:78345444-78345463 | None:intergenic | 25.0% |
| ! | ACACAACAAAAATATGCATA+AGG | + | chr5.2:78345535-78345554 | None:intergenic | 25.0% |
| ! | ACGAAGTTTCAAATACTAAA+GGG | + | chr5.2:78343665-78343684 | None:intergenic | 25.0% |
| ! | AGAAAAAATCAATGCAAACA+GGG | + | chr5.2:78345443-78345462 | None:intergenic | 25.0% |
| ! | AGAACAAAGGATATATACAA+AGG | + | chr5.2:78346148-78346167 | None:intergenic | 25.0% |
| ! | AGATAAAAAGGAAAATGAAC+AGG | + | chr5.2:78347020-78347039 | None:intergenic | 25.0% |
| ! | AGTAAAATAACTTCTGAACA+TGG | + | chr5.2:78343345-78343364 | None:intergenic | 25.0% |
| ! | ATCGACAAAAAATAAGAACT+GGG | + | chr5.2:78342875-78342894 | None:intergenic | 25.0% |
| ! | ATGTGCACAAATTCAATTTA+AGG | + | chr5.2:78344536-78344555 | None:intergenic | 25.0% |
| ! | ATTAGGTTAATTCATAGTAG+TGG | - | chr5.2:78346255-78346274 | MS.gene065513:intron | 25.0% |
| ! | CAACATTAAAACAATTAGCA+AGG | + | chr5.2:78344780-78344799 | None:intergenic | 25.0% |
| ! | CATAAAATCATTATCAGAAC+TGG | + | chr5.2:78342981-78343000 | None:intergenic | 25.0% |
| ! | CATCAACAAAAATAAGAACT+GGG | + | chr5.2:78342928-78342947 | None:intergenic | 25.0% |
| ! | CATCAATAGAAATAGGAATT+GGG | + | chr5.2:78342773-78342792 | None:intergenic | 25.0% |
| ! | CCTATAGAAGATAAGAAAAT+CGG | - | chr5.2:78344863-78344882 | MS.gene065513:intron | 25.0% |
| ! | CTATAGAAGATAAGAAAATC+GGG | - | chr5.2:78344864-78344883 | MS.gene065513:intron | 25.0% |
| ! | GATAAAAAGGAAAATGAACA+GGG | + | chr5.2:78347019-78347038 | None:intergenic | 25.0% |
| ! | GATACAATCAAAGAAAAACA+AGG | + | chr5.2:78343560-78343579 | None:intergenic | 25.0% |
| ! | GTAAAAACAAGATAGAACAA+AGG | + | chr5.2:78346161-78346180 | None:intergenic | 25.0% |
| ! | GTAAAATAACTTCTGAACAT+GGG | + | chr5.2:78343344-78343363 | None:intergenic | 25.0% |
| ! | TACACAACAAAAATACAACA+AGG | + | chr5.2:78345564-78345583 | None:intergenic | 25.0% |
| ! | TACATTGCATCAATAGAAAT+AGG | + | chr5.2:78342780-78342799 | None:intergenic | 25.0% |
| ! | TGAAGAATACCAAGATAAAA+AGG | + | chr5.2:78347032-78347051 | None:intergenic | 25.0% |
| ! | TTGAGAAGACAAAAGATTAA+CGG | - | chr5.2:78347102-78347121 | MS.gene065513:CDS | 25.0% |
| ! | TTTATGATTTCAGAAAAGAG+TGG | - | chr5.2:78346933-78346952 | MS.gene065513:intron | 25.0% |
| ! | TTTATTCAAAATAAGAAGGG+TGG | - | chr5.2:78343743-78343762 | MS.gene065513:intron | 25.0% |
| ! | TTTATTTATTCCTCCAACAT+TGG | - | chr5.2:78343203-78343222 | MS.gene065513:intron | 25.0% |
| !! | ACTAATTTGTATACCAATGT+TGG | + | chr5.2:78343219-78343238 | None:intergenic | 25.0% |
| !! | GCAATCTAATTTTCATCAAT+GGG | - | chr5.2:78343034-78343053 | MS.gene065513:intron | 25.0% |
| !! | GTTCATTTTCCTTTTTATCT+TGG | - | chr5.2:78347020-78347039 | MS.gene065513:intron | 25.0% |
| !! | TGCAATCTAATTTTCATCAA+TGG | - | chr5.2:78343033-78343052 | MS.gene065513:intron | 25.0% |
| !! | TTTAGTATTTGAAACTTCGT+CGG | - | chr5.2:78343665-78343684 | MS.gene065513:intron | 25.0% |
| !! | TTTGTTGAGATATAGCTTTT+GGG | - | chr5.2:78345491-78345510 | MS.gene065513:intron | 25.0% |
| !! | TTTTGTTGAGATATAGCTTT+TGG | - | chr5.2:78345490-78345509 | MS.gene065513:intron | 25.0% |
| !!! | ACAATTTTCAAGTATTTAGG+TGG | - | chr5.2:78344941-78344960 | MS.gene065513:intron | 25.0% |
| !!! | ACCCAATTTTGAAAAAGTTA+AGG | - | chr5.2:78345033-78345052 | MS.gene065513:intron | 25.0% |
| !!! | ATTGTTTTACTTTGTTTGTG+GGG | - | chr5.2:78346095-78346114 | MS.gene065513:intron | 25.0% |
| !!! | CAGTTCTGATAATGATTTTA+TGG | - | chr5.2:78342979-78342998 | MS.gene065513:intron | 25.0% |
| !!! | CCCAATTTTGAAAAAGTTAA+GGG | - | chr5.2:78345034-78345053 | MS.gene065513:intron | 25.0% |
| !!! | CCCTTAACTTTTTCAAAATT+GGG | + | chr5.2:78345037-78345056 | None:intergenic | 25.0% |
| !!! | CTATCTGATTTTAATATTGC+TGG | - | chr5.2:78346846-78346865 | MS.gene065513:intron | 25.0% |
| !!! | GTTGTATTTTTGTTGTGTAT+GGG | - | chr5.2:78345565-78345584 | MS.gene065513:CDS | 25.0% |
| !!! | TACAAAAAAGTGTCCATAAT+TGG | + | chr5.2:78344576-78344595 | None:intergenic | 25.0% |
| !!! | TCCCTTAACTTTTTCAAAAT+TGG | + | chr5.2:78345038-78345057 | None:intergenic | 25.0% |
| !!! | TGCATTGATTTTTTCTTACT+TGG | - | chr5.2:78345447-78345466 | MS.gene065513:intron | 25.0% |
| !!! | TGTTGTATTTTTGTTGTGTA+TGG | - | chr5.2:78345564-78345583 | MS.gene065513:CDS | 25.0% |
| AAAGAATATCCATTCCTAGA+AGG | + | chr5.2:78346400-78346419 | None:intergenic | 30.0% | |
| AATAAGAAGGGTGGTAAAAA+TGG | - | chr5.2:78343752-78343771 | MS.gene065513:intron | 30.0% | |
| AATCAAAGAAAAACAAGGCT+GGG | + | chr5.2:78343555-78343574 | None:intergenic | 30.0% | |
| AATCAATGGTTTCTGATTGA+TGG | - | chr5.2:78343720-78343739 | MS.gene065513:intron | 30.0% | |
| AATCTCTCAGCAATAAAATC+AGG | + | chr5.2:78346698-78346717 | None:intergenic | 30.0% | |
| AATTCAATGCACAATCAGAT+TGG | + | chr5.2:78342674-78342693 | None:intergenic | 30.0% | |
| AATTTGTATACCAATGTTGG+AGG | + | chr5.2:78343216-78343235 | None:intergenic | 30.0% | |
| ACAATTTATTGCAAGCACAA+AGG | + | chr5.2:78344686-78344705 | None:intergenic | 30.0% | |
| ACCTATGTCAAACTTTAACA+AGG | - | chr5.2:78344091-78344110 | MS.gene065513:intron | 30.0% | |
| AGTTATTAAACACGCACTTA+AGG | - | chr5.2:78343269-78343288 | MS.gene065513:intron | 30.0% | |
| CATCGACAAAAAATAAGAAC+TGG | + | chr5.2:78342876-78342895 | None:intergenic | 30.0% | |
| CGGAAAAGTTTGAAAAAAAG+AGG | + | chr5.2:78345890-78345909 | None:intergenic | 30.0% | |
| CTAAATCATGCAGAGATAAT+CGG | + | chr5.2:78345910-78345929 | None:intergenic | 30.0% | |
| CTTGGTTGTAAATGCAAAAA+GGG | - | chr5.2:78347071-78347090 | MS.gene065513:CDS | 30.0% | |
| CTTTATACTACACTGTTGAA+TGG | - | chr5.2:78345959-78345978 | MS.gene065513:intron | 30.0% | |
| GAAAAGATTCTAGATGAACT+GGG | - | chr5.2:78346756-78346775 | MS.gene065513:intron | 30.0% | |
| GAAAGGAAATCTAATATCTG+TGG | + | chr5.2:78344178-78344197 | None:intergenic | 30.0% | |
| GACGAAGTTTCAAATACTAA+AGG | + | chr5.2:78343666-78343685 | None:intergenic | 30.0% | |
| GCATCAACAAAAATAAGAAC+TGG | + | chr5.2:78342929-78342948 | None:intergenic | 30.0% | |
| GCATCAATAGAAATAGGAAT+TGG | + | chr5.2:78342774-78342793 | None:intergenic | 30.0% | |
| GCTGGTAATAAAGATATGAA+TGG | - | chr5.2:78346864-78346883 | MS.gene065513:intron | 30.0% | |
| GGAAAGAATAGTATAAACTC+TGG | - | chr5.2:78344885-78344904 | MS.gene065513:intron | 30.0% | |
| GTGATATCAAACTCCAATTA+TGG | - | chr5.2:78344560-78344579 | MS.gene065513:intron | 30.0% | |
| GTGCATTGAATTTCAGTAAT+TGG | - | chr5.2:78342682-78342701 | MS.gene065513:intron | 30.0% | |
| TAAATGAACAGCTGTAGATT+AGG | + | chr5.2:78344146-78344165 | None:intergenic | 30.0% | |
| TCATAGAATCAGAATCAGAT+AGG | - | chr5.2:78344440-78344459 | MS.gene065513:intron | 30.0% | |
| TCCCTAACATCTTAATATCA+GGG | - | chr5.2:78343693-78343712 | MS.gene065513:intron | 30.0% | |
| TCCCTGATATTAAGATGTTA+GGG | + | chr5.2:78343697-78343716 | None:intergenic | 30.0% | |
| TCTTCTTTGACAACGTAAAA+TGG | + | chr5.2:78342542-78342561 | None:intergenic | 30.0% | |
| TCTTGGTTGTAAATGCAAAA+AGG | - | chr5.2:78347070-78347089 | MS.gene065513:CDS | 30.0% | |
| TGAGATGGAAAATATTCTCT+TGG | - | chr5.2:78344596-78344615 | MS.gene065513:intron | 30.0% | |
| TGCACAAATTCAATTTAAGG+TGG | + | chr5.2:78344533-78344552 | None:intergenic | 30.0% | |
| TGGATCAAGTAATAAAGTCA+TGG | + | chr5.2:78342654-78342673 | None:intergenic | 30.0% | |
| TTAACATGTGTGATAAAGAG+AGG | + | chr5.2:78343863-78343882 | None:intergenic | 30.0% | |
| TTCTAACAATTGCGAAATGA+AGG | + | chr5.2:78342596-78342615 | None:intergenic | 30.0% | |
| TTTCTTGGTTACAAAAGGAA+AGG | + | chr5.2:78344195-78344214 | None:intergenic | 30.0% | |
| ! | ATCTTTTGTCTTCTCAAACT+TGG | + | chr5.2:78347099-78347118 | None:intergenic | 30.0% |
| ! | CATAATGGAAGCCTTAATTA+GGG | + | chr5.2:78345667-78345686 | None:intergenic | 30.0% |
| ! | CCGATTTTCTTATCTTCTAT+AGG | + | chr5.2:78344866-78344885 | None:intergenic | 30.0% |
| ! | GCACAAATTCAATTTAAGGT+GGG | + | chr5.2:78344532-78344551 | None:intergenic | 30.0% |
| ! | TCAAGTATTTAGGTGGTTTT+TGG | - | chr5.2:78344948-78344967 | MS.gene065513:intron | 30.0% |
| ! | TCATAATGGAAGCCTTAATT+AGG | + | chr5.2:78345668-78345687 | None:intergenic | 30.0% |
| ! | TTGTTGAGATATAGCTTTTG+GGG | - | chr5.2:78345492-78345511 | MS.gene065513:intron | 30.0% |
| ! | TTTTATGTGGCAAGATTGAT+AGG | - | chr5.2:78343009-78343028 | MS.gene065513:intron | 30.0% |
| !! | ATGCATATTTTTGTTGTGTG+TGG | - | chr5.2:78345536-78345555 | MS.gene065513:intron | 30.0% |
| !! | TGACATAGGTTATTTTACCT+GGG | + | chr5.2:78344081-78344100 | None:intergenic | 30.0% |
| !! | TGATATTTACTGGTACTGAT+AGG | - | chr5.2:78346451-78346470 | MS.gene065513:intron | 30.0% |
| !! | TGCATATTTTTGTTGTGTGT+GGG | - | chr5.2:78345537-78345556 | MS.gene065513:intron | 30.0% |
| !! | TTGACATAGGTTATTTTACC+TGG | + | chr5.2:78344082-78344101 | None:intergenic | 30.0% |
| AACAATTAGCAAGGATGACA+AGG | + | chr5.2:78344771-78344790 | None:intergenic | 35.0% | |
| AACTGTTTCGCATTACAACA+AGG | + | chr5.2:78345592-78345611 | None:intergenic | 35.0% | |
| AATATCAGGGACTGAATCAA+TGG | - | chr5.2:78343706-78343725 | MS.gene065513:intron | 35.0% | |
| ACAACTCATGCTAGTATAAG+TGG | - | chr5.2:78344331-78344350 | MS.gene065513:intron | 35.0% | |
| ACTTAAGGTATGTCTGAGTT+TGG | - | chr5.2:78343284-78343303 | MS.gene065513:intron | 35.0% | |
| AGCATTGCTAATATTTGACG+TGG | - | chr5.2:78343882-78343901 | MS.gene065513:intron | 35.0% | |
| AGTTTGAACAGATTGTATCG+CGG | + | chr5.2:78343919-78343938 | None:intergenic | 35.0% | |
| ATCAAAGAAAAACAAGGCTG+GGG | + | chr5.2:78343554-78343573 | None:intergenic | 35.0% | |
| ATGAAGTGGAGATTGAAAAC+CGG | - | chr5.2:78344030-78344049 | MS.gene065513:intron | 35.0% | |
| ATGGAGTCTAGTGAAAATGT+TGG | - | chr5.2:78343771-78343790 | MS.gene065513:intron | 35.0% | |
| ATTTCAGAAAAGAGTGGCAA+TGG | - | chr5.2:78346939-78346958 | MS.gene065513:intron | 35.0% | |
| CAACTCATGCTAGTATAAGT+GGG | - | chr5.2:78344332-78344351 | MS.gene065513:intron | 35.0% | |
| CAAGACATTCAGATATGACT+AGG | + | chr5.2:78347055-78347074 | None:intergenic | 35.0% | |
| CAATCAAAGAAAAACAAGGC+TGG | + | chr5.2:78343556-78343575 | None:intergenic | 35.0% | |
| CAGATAGCAAAATCGAAAAG+CGG | + | chr5.2:78346833-78346852 | None:intergenic | 35.0% | |
| CAGCAGATAAAGAAAAGGAA+TGG | + | chr5.2:78344228-78344247 | None:intergenic | 35.0% | |
| CTAGTCATATCTGAATGTCT+TGG | - | chr5.2:78347053-78347072 | MS.gene065513:intron | 35.0% | |
| CTTCAGTTGAAAACACTTGA+AGG | + | chr5.2:78346653-78346672 | None:intergenic | 35.0% | |
| GGAAAAGATTCTAGATGAAC+TGG | - | chr5.2:78346755-78346774 | MS.gene065513:intron | 35.0% | |
| GTCAAACTTTAACAAGGCTA+AGG | - | chr5.2:78344097-78344116 | MS.gene065513:intron | 35.0% | |
| GTCCCTAACATCTTAATATC+AGG | - | chr5.2:78343692-78343711 | MS.gene065513:intron | 35.0% | |
| GTCCCTGATATTAAGATGTT+AGG | + | chr5.2:78343698-78343717 | None:intergenic | 35.0% | |
| TAAAATGGATCTTGAGCTGA+GGG | + | chr5.2:78342527-78342546 | None:intergenic | 35.0% | |
| TACATTGACCAAATTGTGGA+AGG | + | chr5.2:78343165-78343184 | None:intergenic | 35.0% | |
| TACTGTTGAAAATCAACTGC+AGG | + | chr5.2:78345995-78346014 | None:intergenic | 35.0% | |
| TATCTCAACAAAAGAAGCCT+CGG | + | chr5.2:78345483-78345502 | None:intergenic | 35.0% | |
| TCATGCAGCAGATAAAGAAA+AGG | + | chr5.2:78344233-78344252 | None:intergenic | 35.0% | |
| TGATAGAAAGGTGGATGAAT+TGG | - | chr5.2:78343959-78343978 | MS.gene065513:intron | 35.0% | |
| TGTCAAAATCTTGATGCTTC+AGG | - | chr5.2:78346734-78346753 | MS.gene065513:intron | 35.0% | |
| TTAAGGCTTCCATTATGAGT+TGG | - | chr5.2:78345670-78345689 | MS.gene065513:intron | 35.0% | |
| TTGGACAAAATCTAGACGAT+TGG | + | chr5.2:78346802-78346821 | None:intergenic | 35.0% | |
| ! | GCCTTGTTAAAGTTTGACAT+AGG | + | chr5.2:78344095-78344114 | None:intergenic | 35.0% |
| ! | TGTTGAGATATAGCTTTTGG+GGG | - | chr5.2:78345493-78345512 | MS.gene065513:intron | 35.0% |
| ! | TTCAAAAGTTTGAGGTGCAT+GGG | + | chr5.2:78345747-78345766 | None:intergenic | 35.0% |
| ! | TTTACTTTGTTTGTGGGGTT+GGG | - | chr5.2:78346100-78346119 | MS.gene065513:intron | 35.0% |
| ! | TTTCAAAAGTTTGAGGTGCA+TGG | + | chr5.2:78345748-78345767 | None:intergenic | 35.0% |
| !! | GCTTTGAAAACTAGTAGACT+AGG | - | chr5.2:78346606-78346625 | MS.gene065513:intron | 35.0% |
| !! | TTTTACTTTGTTTGTGGGGT+TGG | - | chr5.2:78346099-78346118 | MS.gene065513:intron | 35.0% |
| !!! | GGACACTTTTTTGTATGAGA+TGG | - | chr5.2:78344581-78344600 | MS.gene065513:intron | 35.0% |
| AAAACAATGTCGCACAGGAA+CGG | + | chr5.2:78345232-78345251 | None:intergenic | 40.0% | |
| AAGTCTAACCAATATGCCTC+TGG | - | chr5.2:78344403-78344422 | MS.gene065513:intron | 40.0% | |
| ACAATACATGAAGAGCTCCT+TGG | - | chr5.2:78346537-78346556 | MS.gene065513:CDS | 40.0% | |
| AGACTGAGAAACTGTATCGA+AGG | + | chr5.2:78345388-78345407 | None:intergenic | 40.0% | |
| AGATGAACTGGGAAATGAGA+TGG | - | chr5.2:78346767-78346786 | MS.gene065513:intron | 40.0% | |
| AGCACAAAGGATCTTACATC+TGG | + | chr5.2:78344673-78344692 | None:intergenic | 40.0% | |
| AGTCTAACCAATATGCCTCT+GGG | - | chr5.2:78344404-78344423 | MS.gene065513:intron | 40.0% | |
| ATCTCAACAAAAGAAGCCTC+GGG | + | chr5.2:78345482-78345501 | None:intergenic | 40.0% | |
| ATTAAGAGAACAGTGGAAGC+TGG | - | chr5.2:78344292-78344311 | MS.gene065513:intron | 40.0% | |
| ATTATGCTCAACAGTGTGAC+TGG | - | chr5.2:78345811-78345830 | MS.gene065513:intron | 40.0% | |
| CAATACATGAAGAGCTCCTT+GGG | - | chr5.2:78346538-78346557 | MS.gene065513:CDS | 40.0% | |
| CAGCAAGAACTTCCTTTGAA+AGG | + | chr5.2:78343091-78343110 | None:intergenic | 40.0% | |
| CGAGCATTTGAACCTTTCAA+AGG | - | chr5.2:78343076-78343095 | MS.gene065513:intron | 40.0% | |
| GAAATCATCATTATCCCCAG+AGG | + | chr5.2:78344422-78344441 | None:intergenic | 40.0% | |
| GACGTACTTTGATGAGAATC+TGG | + | chr5.2:78344382-78344401 | None:intergenic | 40.0% | |
| GGAGTTTAATCTAGATCAGC+CGG | - | chr5.2:78343305-78343324 | MS.gene065513:intron | 40.0% | |
| GTAAAATGGATCTTGAGCTG+AGG | + | chr5.2:78342528-78342547 | None:intergenic | 40.0% | |
| GTCCACAGTTGTTCCATTTA+CGG | - | chr5.2:78345201-78345220 | MS.gene065513:CDS | 40.0% | |
| TAGCATCTAGAGATCCTTCT+TGG | - | chr5.2:78343997-78344016 | MS.gene065513:intron | 40.0% | |
| TAGTATAAGTGGGATGCACA+GGG | - | chr5.2:78344342-78344361 | MS.gene065513:intron | 40.0% | |
| TAGTGAAGCCTTCCACAATT+TGG | - | chr5.2:78343154-78343173 | MS.gene065513:intron | 40.0% | |
| TATCATCGCTTGCATGAACT+GGG | - | chr5.2:78343239-78343258 | MS.gene065513:intron | 40.0% | |
| TCAAAAGAGAATACGCACGA+TGG | + | chr5.2:78345132-78345151 | None:intergenic | 40.0% | |
| TCAATGCAAACAGGGTAACA+TGG | + | chr5.2:78345435-78345454 | None:intergenic | 40.0% | |
| TCATCAATGCCATACCAAGA+AGG | + | chr5.2:78344014-78344033 | None:intergenic | 40.0% | |
| TCTAGAGATCCTTCTTGGTA+TGG | - | chr5.2:78344002-78344021 | MS.gene065513:intron | 40.0% | |
| TGCATCTCATGTTTAAGCCA+GGG | - | chr5.2:78345632-78345651 | MS.gene065513:CDS | 40.0% | |
| TGGGAAAACACTTCTGATAC+TGG | - | chr5.2:78343053-78343072 | MS.gene065513:intron | 40.0% | |
| TTATCATCGCTTGCATGAAC+TGG | - | chr5.2:78343238-78343257 | MS.gene065513:intron | 40.0% | |
| ! | AATGCGAAACAGTTGCTGTT+TGG | - | chr5.2:78345598-78345617 | MS.gene065513:CDS | 40.0% |
| ! | ATTAGGGAACCTTCTAGGAA+TGG | - | chr5.2:78346388-78346407 | MS.gene065513:intron | 40.0% |
| ! | TCCATTATGAGTTGGCAGTA+GGG | - | chr5.2:78345678-78345697 | MS.gene065513:intron | 40.0% |
| ! | TTCCATTATGAGTTGGCAGT+AGG | - | chr5.2:78345677-78345696 | MS.gene065513:intron | 40.0% |
| ! | TTTTCACCTTTCCTACCACA+GGG | + | chr5.2:78343587-78343606 | None:intergenic | 40.0% |
| ! | TTTTTCACCTTTCCTACCAC+AGG | + | chr5.2:78343588-78343607 | None:intergenic | 40.0% |
| !! | TTGGTATGGCATTGATGAAG+TGG | - | chr5.2:78344016-78344035 | MS.gene065513:intron | 40.0% |
| AAAGAAAAACAAGGCTGGGG+AGG | + | chr5.2:78343551-78343570 | None:intergenic | 45.0% | |
| AAGTGGAGATTGAAAACCGG+AGG | - | chr5.2:78344033-78344052 | MS.gene065513:intron | 45.0% | |
| AGAACAGTGGAAGCTGGAAA+GGG | - | chr5.2:78344298-78344317 | MS.gene065513:intron | 45.0% | |
| AGCCGTAAATGGAACAACTG+TGG | + | chr5.2:78345206-78345225 | None:intergenic | 45.0% | |
| ATATCAAAGCTACCTGCCCA+AGG | + | chr5.2:78346557-78346576 | None:intergenic | 45.0% | |
| ATCTCATGTTTAAGCCAGGG+AGG | - | chr5.2:78345635-78345654 | MS.gene065513:CDS | 45.0% | |
| ATGAAGAAGGCCAGTGCAAA+GGG | - | chr5.2:78346964-78346983 | MS.gene065513:intron | 45.0% | |
| CAACTGTGGACGAACCAAAA+TGG | + | chr5.2:78345192-78345211 | None:intergenic | 45.0% | |
| CATGTGTGATAAAGAGAGGC+TGG | + | chr5.2:78343859-78343878 | None:intergenic | 45.0% | |
| CTAGTATAAGTGGGATGCAC+AGG | - | chr5.2:78344341-78344360 | MS.gene065513:intron | 45.0% | |
| CTGCATCTCATGTTTAAGCC+AGG | - | chr5.2:78345631-78345650 | MS.gene065513:CDS | 45.0% | |
| GATGATGATATGCGGTTTGC+TGG | - | chr5.2:78346993-78347012 | MS.gene065513:intron | 45.0% | |
| GCGCACAATTAAGAGAACAG+TGG | - | chr5.2:78344285-78344304 | MS.gene065513:intron | 45.0% | |
| GGAGGGTGATTCCCTAATTA+AGG | - | chr5.2:78345653-78345672 | MS.gene065513:CDS | 45.0% | |
| GGATGCACAGGGAATTAATG+AGG | - | chr5.2:78344353-78344372 | MS.gene065513:intron | 45.0% | |
| GGTCGATACAGTGAAGGTTA+AGG | + | chr5.2:78345333-78345352 | None:intergenic | 45.0% | |
| GTAGACTAAGTGTGTGCTTG+TGG | + | chr5.2:78343820-78343839 | None:intergenic | 45.0% | |
| GTCTAACCAATATGCCTCTG+GGG | - | chr5.2:78344405-78344424 | MS.gene065513:intron | 45.0% | |
| GTTTAATCTAGATCAGCCGG+AGG | - | chr5.2:78343308-78343327 | MS.gene065513:intron | 45.0% | |
| TAAGTGTGTGCTTGTGGAGT+TGG | + | chr5.2:78343814-78343833 | None:intergenic | 45.0% | |
| TACTTGGCATTGTTATCCCG+AGG | - | chr5.2:78345463-78345482 | MS.gene065513:intron | 45.0% | |
| TCCCTACTGCCAACTCATAA+TGG | + | chr5.2:78345682-78345701 | None:intergenic | 45.0% | |
| TCGAAAAGCGGAAACTCACT+TGG | + | chr5.2:78346821-78346840 | None:intergenic | 45.0% | |
| TCTCATGTTTAAGCCAGGGA+GGG | - | chr5.2:78345636-78345655 | MS.gene065513:CDS | 45.0% | |
| TTGATTGTATCCCTTCCCTG+TGG | - | chr5.2:78343569-78343588 | MS.gene065513:intron | 45.0% | |
| ! | AAGGAAGTTCTTGCTGCTTG+TGG | - | chr5.2:78343095-78343114 | MS.gene065513:CDS | 45.0% |
| ! | AGTGGCAATGGTGATGAAGA+AGG | - | chr5.2:78346951-78346970 | MS.gene065513:intron | 45.0% |
| ! | CATTATCCCCAGAGGCATAT+TGG | + | chr5.2:78344414-78344433 | None:intergenic | 45.0% |
| ! | GGGCAGATGATGATGATATG+CGG | - | chr5.2:78346985-78347004 | MS.gene065513:intron | 45.0% |
| ! | TATGAGTTGGCAGTAGGGAA+GGG | - | chr5.2:78345683-78345702 | MS.gene065513:intron | 45.0% |
| ! | TTATGAGTTGGCAGTAGGGA+AGG | - | chr5.2:78345682-78345701 | MS.gene065513:intron | 45.0% |
| !! | CTGCTTGTGGAAGTATTGAG+TGG | - | chr5.2:78343108-78343127 | MS.gene065513:CDS | 45.0% |
| !! | TAAAGCGTCGCACACAATGA+AGG | + | chr5.2:78345362-78345381 | None:intergenic | 45.0% |
| !! | TGAGATATAGCTTTTGGGGG+TGG | - | chr5.2:78345496-78345515 | MS.gene065513:intron | 45.0% |
| !! | TTGTGGAAGTATTGAGTGGC+AGG | - | chr5.2:78343112-78343131 | MS.gene065513:CDS | 45.0% |
| !! | TTGTGGGGTTGGGTTTGTTT+TGG | - | chr5.2:78346110-78346129 | MS.gene065513:intron | 45.0% |
| AACAGAAAACCACCCGAACG+AGG | - | chr5.2:78346364-78346383 | MS.gene065513:intron | 50.0% | |
| AATTAGGGAATCACCCTCCC+TGG | + | chr5.2:78345652-78345671 | None:intergenic | 50.0% | |
| ACCTTTCCTACCACAGGGAA+GGG | + | chr5.2:78343582-78343601 | None:intergenic | 50.0% | |
| ACGAACCAAAATGGCAGGGA+GGG | + | chr5.2:78345183-78345202 | None:intergenic | 50.0% | |
| AGATTGAAAACCGGAGGAGG+TGG | - | chr5.2:78344039-78344058 | MS.gene065513:intron | 50.0% | |
| AGGTTCCCTAATGCCTCGTT+CGG | + | chr5.2:78346380-78346399 | None:intergenic | 50.0% | |
| CATGGGAAGATCACTTCCTC+CGG | + | chr5.2:78343327-78343346 | None:intergenic | 50.0% | |
| GAGAACAGTGGAAGCTGGAA+AGG | - | chr5.2:78344297-78344316 | MS.gene065513:intron | 50.0% | |
| GATGAAGAAGGCCAGTGCAA+AGG | - | chr5.2:78346963-78346982 | MS.gene065513:intron | 50.0% | |
| GCGCAAAAACAATGTCGCAC+AGG | + | chr5.2:78345237-78345256 | None:intergenic | 50.0% | |
| GTCGCACACAATGAAGGCTA+GGG | + | chr5.2:78345356-78345375 | None:intergenic | 50.0% | |
| GTGGACGAACCAAAATGGCA+GGG | + | chr5.2:78345187-78345206 | None:intergenic | 50.0% | |
| TCGCACACAATGAAGGCTAG+GGG | + | chr5.2:78345355-78345374 | None:intergenic | 50.0% | |
| TGAAGAAGGCCAGTGCAAAG+GGG | - | chr5.2:78346965-78346984 | MS.gene065513:intron | 50.0% | |
| TGGAGATTGAAAACCGGAGG+AGG | - | chr5.2:78344036-78344055 | MS.gene065513:intron | 50.0% | |
| TGTGATAAAGAGAGGCTGGC+AGG | + | chr5.2:78343855-78343874 | None:intergenic | 50.0% | |
| TGTGGACGAACCAAAATGGC+AGG | + | chr5.2:78345188-78345207 | None:intergenic | 50.0% | |
| TTGTATCCCTTCCCTGTGGT+AGG | - | chr5.2:78343573-78343592 | MS.gene065513:intron | 50.0% | |
| ! | AAGGTTAAGGCATCACGAGC+AGG | + | chr5.2:78345320-78345339 | None:intergenic | 50.0% |
| ! | AGGTTAAGGCATCACGAGCA+GGG | + | chr5.2:78345319-78345338 | None:intergenic | 50.0% |
| ! | GAGGCATTAGGGAACCTTCT+AGG | - | chr5.2:78346383-78346402 | MS.gene065513:intron | 50.0% |
| !! | AACAGTTGCTGTTTGGCCGT+TGG | - | chr5.2:78345605-78345624 | MS.gene065513:CDS | 50.0% |
| !! | AATGACCCTCCCTGCCATTT+TGG | - | chr5.2:78345175-78345194 | MS.gene065513:CDS | 50.0% |
| !! | ACAGGAAAGGCATCACTGAC+AGG | + | chr5.2:78345269-78345288 | None:intergenic | 50.0% |
| !! | ACAGTTGCTGTTTGGCCGTT+GGG | - | chr5.2:78345606-78345625 | MS.gene065513:CDS | 50.0% |
| !! | TACTGGTACTGATAGGCAGC+AGG | - | chr5.2:78346458-78346477 | MS.gene065513:intron | 50.0% |
| AAAAACAAGGCTGGGGAGGC+GGG | + | chr5.2:78343547-78343566 | None:intergenic | 55.0% | |
| AACAGGGTAACATGGAGCGC+AGG | + | chr5.2:78345427-78345446 | None:intergenic | 55.0% | |
| ACAATGTCGCACAGGAACGG+TGG | + | chr5.2:78345229-78345248 | None:intergenic | 55.0% | |
| ACATGAAGAGCTCCTTGGGC+AGG | - | chr5.2:78346542-78346561 | MS.gene065513:CDS | 55.0% | |
| ACATGAGATGCAGCCCCCAA+CGG | + | chr5.2:78345624-78345643 | None:intergenic | 55.0% | |
| AGGAACGCTGCTCACAGGAA+AGG | + | chr5.2:78345282-78345301 | None:intergenic | 55.0% | |
| AGGAACGGTGGAGCCGTAAA+TGG | + | chr5.2:78345217-78345236 | None:intergenic | 55.0% | |
| CACCTTTCCTACCACAGGGA+AGG | + | chr5.2:78343583-78343602 | None:intergenic | 55.0% | |
| CATCATCTGCCCCTTTGCAC+TGG | + | chr5.2:78346977-78346996 | None:intergenic | 55.0% | |
| CGCACACAATGAAGGCTAGG+GGG | + | chr5.2:78345354-78345373 | None:intergenic | 55.0% | |
| CGTCGCACACAATGAAGGCT+AGG | + | chr5.2:78345357-78345376 | None:intergenic | 55.0% | |
| CTAGGGGGTCGATACAGTGA+AGG | + | chr5.2:78345339-78345358 | None:intergenic | 55.0% | |
| GAAAAACAAGGCTGGGGAGG+CGG | + | chr5.2:78343548-78343567 | None:intergenic | 55.0% | |
| GACGAACCAAAATGGCAGGG+AGG | + | chr5.2:78345184-78345203 | None:intergenic | 55.0% | |
| GGTAACATGGAGCGCAGGAA+GGG | + | chr5.2:78345422-78345441 | None:intergenic | 55.0% | |
| GGTTCCCTAATGCCTCGTTC+GGG | + | chr5.2:78346379-78346398 | None:intergenic | 55.0% | |
| TACTGATAGGCAGCAGGACG+AGG | - | chr5.2:78346464-78346483 | MS.gene065513:intron | 55.0% | |
| TCCCTTCCCTGTGGTAGGAA+AGG | - | chr5.2:78343578-78343597 | MS.gene065513:intron | 55.0% | |
| ! | AACCACCCGAACGAGGCATT+AGG | - | chr5.2:78346371-78346390 | MS.gene065513:intron | 55.0% |
| ! | ACCACCCGAACGAGGCATTA+GGG | - | chr5.2:78346372-78346391 | MS.gene065513:intron | 55.0% |
| ! | TAAGGCATCACGAGCAGGGA+AGG | + | chr5.2:78345315-78345334 | None:intergenic | 55.0% |
| !! | AGTTGCTGTTTGGCCGTTGG+GGG | - | chr5.2:78345608-78345627 | MS.gene065513:CDS | 55.0% |
| !! | CAGTTGCTGTTTGGCCGTTG+GGG | - | chr5.2:78345607-78345626 | MS.gene065513:CDS | 55.0% |
| AAAACAAGGCTGGGGAGGCG+GGG | + | chr5.2:78343546-78343565 | None:intergenic | 60.0% | |
| AGCGCAGGAAGGGAATGGTG+TGG | + | chr5.2:78345412-78345431 | None:intergenic | 60.0% | |
| CATGGAGCGCAGGAAGGGAA+TGG | + | chr5.2:78345417-78345436 | None:intergenic | 60.0% | |
| CATTGCTGGTCCACCTCCTC+CGG | + | chr5.2:78344052-78344071 | None:intergenic | 60.0% | |
| GGGTAACATGGAGCGCAGGA+AGG | + | chr5.2:78345423-78345442 | None:intergenic | 60.0% | |
| TAGGCAGCAGGACGAGGAGT+TGG | - | chr5.2:78346470-78346489 | MS.gene065513:intron | 60.0% | |
| TCCCTAATGCCTCGTTCGGG+TGG | + | chr5.2:78346376-78346395 | None:intergenic | 60.0% | |
| TCCTGTGAGCAGCGTTCCTG+CGG | - | chr5.2:78345283-78345302 | MS.gene065513:CDS | 60.0% | |
| ! | TACCTGGGTGCGAGCATTGC+TGG | + | chr5.2:78344066-78344085 | None:intergenic | 60.0% |
| CCTGTGAGCAGCGTTCCTGC+GGG | - | chr5.2:78345284-78345303 | MS.gene065513:CDS | 65.0% | |
| GACCAGCAATGCTCGCACCC+AGG | - | chr5.2:78344061-78344080 | MS.gene065513:intron | 65.0% | |
| AAGGCTGGGGAGGCGGGGAA+AGG | + | chr5.2:78343541-78343560 | None:intergenic | 70.0% | |
| CCCGCAGGAACGCTGCTCAC+AGG | + | chr5.2:78345287-78345306 | None:intergenic | 70.0% | |
| GCAGGGAAGGCTGTGCCCGC+AGG | + | chr5.2:78345302-78345321 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 78342521 | 78347121 | 78342521 | ID=MS.gene065513 |
| chr5.2 | mRNA | 78342521 | 78347121 | 78342521 | ID=MS.gene065513.t1;Parent=MS.gene065513 |
| chr5.2 | exon | 78347068 | 78347121 | 78347068 | ID=MS.gene065513.t1.exon1;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78347068 | 78347121 | 78347068 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78346509 | 78346619 | 78346509 | ID=MS.gene065513.t1.exon2;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78346509 | 78346619 | 78346509 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78345560 | 78345673 | 78345560 | ID=MS.gene065513.t1.exon3;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78345560 | 78345673 | 78345560 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78345163 | 78345359 | 78345163 | ID=MS.gene065513.t1.exon4;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78345163 | 78345359 | 78345163 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78343079 | 78343169 | 78343079 | ID=MS.gene065513.t1.exon5;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78343079 | 78343169 | 78343079 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78342775 | 78342886 | 78342775 | ID=MS.gene065513.t1.exon6;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78342775 | 78342886 | 78342775 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| chr5.2 | exon | 78342521 | 78342696 | 78342521 | ID=MS.gene065513.t1.exon7;Parent=MS.gene065513.t1 |
| chr5.2 | CDS | 78342521 | 78342696 | 78342521 | ID=cds.MS.gene065513.t1;Parent=MS.gene065513.t1 |
| Gene Sequence |
| Protein sequence |
