AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006089

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006089.t1 MTR_1g097440 96.440 646 16 1 1 639 1 646 0.0 1276
MS.gene006089.t1 MTR_6g040190 64.263 638 204 9 1 632 1 620 0.0 783
MS.gene006089.t1 MTR_4g085540 59.150 612 225 13 27 623 31 632 0.0 687
MS.gene006089.t1 MTR_1g019150 56.320 625 254 11 27 639 29 646 0.0 657
MS.gene006089.t1 MTR_3g102040 56.447 636 244 12 13 639 7 618 0.0 634
MS.gene006089.t1 MTR_6g040070 66.231 459 145 4 104 562 1 449 0.0 608
MS.gene006089.t1 MTR_7g102730 43.021 609 314 10 30 619 10 604 2.80e-147 441
MS.gene006089.t1 MTR_1g061870 41.649 473 249 8 8 474 1 452 1.19e-113 350
MS.gene006089.t1 MTR_3g065190 35.556 180 113 3 29 206 24 202 1.66e-30 124
MS.gene006089.t1 MTR_3g065190 29.570 186 110 5 212 394 28 195 2.04e-16 82.0
MS.gene006089.t1 MTR_3g065190 28.342 187 124 5 111 292 18 199 9.70e-16 79.7
MS.gene006089.t1 MTR_1723s0010 65.060 83 24 1 1 83 1 78 6.45e-28 107
MS.gene006089.t1 MTR_1g020080 31.655 278 161 11 29 284 96 366 1.00e-26 113
MS.gene006089.t1 MTR_1g020080 23.944 284 206 6 119 398 98 375 1.09e-22 101
MS.gene006089.t1 MTR_3g101370 29.242 277 170 10 29 284 92 363 7.70e-25 107
MS.gene006089.t1 MTR_3g101370 25.000 308 212 11 120 421 95 389 4.67e-20 93.6
MS.gene006089.t1 MTR_4g131970 28.881 277 170 9 31 285 75 346 3.73e-24 105
MS.gene006089.t1 MTR_4g131970 23.509 285 204 9 120 397 76 353 3.06e-17 84.7
MS.gene006089.t1 MTR_2g022950 28.223 287 178 11 31 294 61 342 2.24e-23 103
MS.gene006089.t1 MTR_2g022950 23.077 286 205 9 120 397 62 340 2.88e-16 81.6
MS.gene006089.t1 MTR_0913s0010 65.714 70 24 0 565 634 1 70 8.09e-23 92.8
MS.gene006089.t1 MTR_0989s0020 72.581 62 17 0 562 623 12 73 1.19e-22 92.8
MS.gene006089.t1 MTR_1889s0010 63.492 63 22 1 23 85 14 75 3.34e-20 85.9
MS.gene006089.t1 MTR_2g097960 26.599 297 172 10 31 286 16 307 5.93e-20 93.2
MS.gene006089.t1 MTR_8g022050 26.117 291 167 9 26 280 58 336 3.32e-19 90.9
MS.gene006089.t1 MTR_8g022050 27.063 303 177 10 109 382 57 344 1.46e-17 85.9
MS.gene006089.t1 MTR_3g109090 25.993 277 164 9 31 274 45 313 3.96e-19 90.9
MS.gene006089.t1 MTR_3g109090 25.685 292 190 6 110 383 36 318 4.18e-18 87.8
MS.gene006089.t1 MTR_3g109090 25.993 277 164 9 31 274 61 329 5.30e-19 90.5
MS.gene006089.t1 MTR_3g109090 25.685 292 190 6 110 383 52 334 5.40e-18 87.4
MS.gene006089.t1 MTR_4g086600 27.609 297 166 11 31 285 117 406 9.22e-19 89.7
MS.gene006089.t1 MTR_4g086600 28.141 199 123 7 198 392 113 295 1.96e-12 70.1
MS.gene006089.t1 MTR_4g124940 25.083 303 178 9 8 270 17 310 2.31e-18 88.2
MS.gene006089.t1 MTR_4g124940 24.832 298 184 7 110 383 38 319 1.29e-16 82.8
MS.gene006089.t1 MTR_1g020080 29.070 172 111 5 29 191 96 265 5.42e-16 79.7
MS.gene006089.t1 MTR_6g040200 51.899 79 36 1 460 538 1 77 7.80e-16 73.6
MS.gene006089.t1 MTR_4g052940 25.591 254 173 6 20 267 100 343 1.85e-15 80.1
MS.gene006089.t1 MTR_3g075500 31.771 192 119 5 206 394 106 288 2.76e-15 77.4
MS.gene006089.t1 MTR_3g075500 26.519 181 111 4 26 190 105 279 3.97e-11 64.7
MS.gene006089.t1 MTR_2g022950 28.235 170 113 5 31 191 61 230 3.39e-15 76.6
MS.gene006089.t1 MTR_4g052940 25.591 254 173 6 20 267 100 343 4.77e-15 77.4
MS.gene006089.t1 MTR_1g056520 29.012 162 103 2 32 181 110 271 6.55e-15 76.6
MS.gene006089.t1 MTR_1g056520 28.649 185 114 5 211 388 110 283 1.60e-11 66.2
MS.gene006089.t1 MTR_1g056520 28.235 170 107 6 117 274 107 273 5.33e-11 64.7
MS.gene006089.t1 MTR_2g022950 28.235 170 113 5 31 191 61 230 1.74e-14 74.7
MS.gene006089.t1 MTR_3g101370 26.178 191 128 5 29 206 92 282 1.79e-14 75.1
MS.gene006089.t1 MTR_7g106440 25.854 205 131 4 32 220 111 310 6.09e-14 73.6
MS.gene006089.t1 MTR_3g075500 32.571 175 106 5 206 377 106 271 6.65e-14 72.8
MS.gene006089.t1 MTR_7g118120 23.273 275 197 5 22 291 96 361 1.04e-13 74.3
MS.gene006089.t1 MTR_3g055990 25.490 255 132 11 211 423 8 246 2.57e-13 73.2
MS.gene006089.t1 MTR_3g055990 25.490 255 132 11 211 423 8 246 2.86e-13 72.8
MS.gene006089.t1 MTR_7g010360 23.636 275 197 5 20 290 340 605 3.38e-13 73.2
MS.gene006089.t1 MTR_1g064230 29.412 187 107 4 29 190 83 269 4.79e-13 70.5
MS.gene006089.t1 MTR_1g064230 29.208 202 114 5 120 299 86 280 1.38e-12 68.9
MS.gene006089.t1 MTR_7g094660 31.304 230 136 12 102 318 627 847 9.27e-13 72.0
MS.gene006089.t1 MTR_7g094660 28.936 235 144 10 181 402 609 833 8.76e-12 68.9
MS.gene006089.t1 MTR_5g030020 34.595 185 108 7 210 391 97 271 9.49e-13 70.1
MS.gene006089.t1 MTR_4g104470 30.645 186 116 5 211 394 124 298 2.04e-12 68.9
MS.gene006089.t1 MTR_7g107580 27.168 346 201 15 211 549 18 319 2.54e-12 69.3
MS.gene006089.t1 MTR_8g007390 22.711 273 186 8 32 291 216 476 4.31e-12 69.7
MS.gene006089.t1 MTR_4g063560 37.805 82 50 1 112 192 27 108 4.78e-12 63.5
MS.gene006089.t1 MTR_8g007390 22.711 273 186 8 32 291 217 477 4.99e-12 69.7
MS.gene006089.t1 MTR_7g107580 27.011 348 203 15 209 549 16 319 6.37e-12 68.6
MS.gene006089.t1 MTR_2g026180 27.717 184 104 8 211 378 6 176 2.62e-11 66.6
MS.gene006089.t1 MTR_3g027140 31.217 189 119 6 193 378 45 225 4.08e-11 63.9
MS.gene006089.t1 MTR_4g122650 25.128 195 124 6 208 396 87 265 4.97e-11 66.2
MS.gene006089.t1 MTR_8g463890 27.801 241 151 7 148 381 10 234 8.75e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006089.t1 AT1G71770 57.532 624 242 13 29 633 58 677 0.0 692
MS.gene006089.t1 AT1G71770 57.532 624 242 13 29 633 58 677 0.0 692
MS.gene006089.t1 AT1G22760 57.369 631 236 13 4 619 31 643 0.0 680
MS.gene006089.t1 AT4G34110 55.000 640 258 14 10 638 9 629 0.0 646
MS.gene006089.t1 AT1G49760 54.976 633 254 15 29 639 44 667 0.0 626
MS.gene006089.t1 AT1G49760 54.976 633 254 15 29 639 44 667 0.0 626
MS.gene006089.t1 AT2G23350 53.407 631 257 15 30 639 46 660 0.0 615
MS.gene006089.t1 AT2G36660 38.963 598 331 9 28 624 22 586 9.62e-125 382
MS.gene006089.t1 AT1G34140 49.515 412 173 8 89 473 2 405 4.72e-119 360
MS.gene006089.t1 AT1G34140 31.802 283 177 4 31 299 32 312 6.22e-37 143
MS.gene006089.t1 AT3G16380 45.600 375 198 4 31 402 22 393 1.68e-101 320
MS.gene006089.t1 AT3G16380 34.138 290 169 6 118 403 21 292 8.37e-40 154
MS.gene006089.t1 AT3G16380 34.197 193 111 4 205 396 17 194 2.01e-22 102
MS.gene006089.t1 AT3G16380 33.508 191 105 4 29 201 201 387 1.48e-21 99.4
MS.gene006089.t1 AT2G18510 33.889 180 116 3 29 206 24 202 3.93e-29 119
MS.gene006089.t1 AT2G18510 27.273 187 115 5 211 394 27 195 8.21e-15 77.0
MS.gene006089.t1 AT1G47500 31.673 281 162 11 29 284 102 377 5.73e-27 114
MS.gene006089.t1 AT1G47500 26.071 280 174 12 120 381 105 369 1.32e-19 92.4
MS.gene006089.t1 AT3G19130 31.544 298 160 12 31 291 109 399 2.86e-26 112
MS.gene006089.t1 AT3G19130 27.667 300 170 13 116 383 102 386 1.62e-19 92.0
MS.gene006089.t1 AT1G47490 31.673 281 162 11 29 284 100 375 8.77e-26 110
MS.gene006089.t1 AT1G47490 26.740 273 181 12 120 381 103 367 1.95e-21 97.8
MS.gene006089.t1 AT1G49600 29.448 326 186 12 31 324 120 433 1.01e-23 105
MS.gene006089.t1 AT1G49600 27.622 286 171 11 120 383 121 392 1.20e-19 92.8
MS.gene006089.t1 AT1G49600 30.847 295 165 11 31 293 120 407 1.14e-23 105
MS.gene006089.t1 AT1G49600 26.959 319 189 13 114 405 110 411 2.34e-20 94.7
MS.gene006089.t1 AT1G49600 30.847 295 165 11 31 293 120 407 1.14e-23 105
MS.gene006089.t1 AT1G49600 26.959 319 189 13 114 405 110 411 2.34e-20 94.7
MS.gene006089.t1 AT5G54900 27.500 280 176 9 31 288 61 335 1.17e-23 103
MS.gene006089.t1 AT5G54900 23.826 298 193 11 119 399 61 341 1.20e-15 79.7
MS.gene006089.t1 AT1G54080 27.273 308 168 11 7 270 32 327 3.33e-23 103
MS.gene006089.t1 AT1G54080 27.875 287 173 9 109 376 58 329 7.18e-19 90.1
MS.gene006089.t1 AT1G54080 28.571 175 105 5 210 383 64 219 1.97e-12 70.1
MS.gene006089.t1 AT1G11650 26.557 305 197 10 2 285 35 333 2.04e-22 100
MS.gene006089.t1 AT1G11650 23.381 278 199 7 110 379 51 322 3.28e-15 78.6
MS.gene006089.t1 AT4G27000 27.636 275 174 10 31 285 81 350 3.60e-22 100
MS.gene006089.t1 AT4G27000 23.973 292 194 11 119 397 81 357 5.34e-14 75.1
MS.gene006089.t1 AT1G54080 27.244 312 167 12 7 270 32 331 8.27e-22 99.0
MS.gene006089.t1 AT1G54080 27.835 291 172 10 109 376 58 333 1.77e-17 85.9
MS.gene006089.t1 AT1G11650 26.182 275 177 9 2 256 35 303 2.67e-20 92.4
MS.gene006089.t1 AT3G14100 25.267 281 162 8 26 270 55 323 2.98e-19 91.3
MS.gene006089.t1 AT3G14100 27.758 281 169 8 109 370 54 319 8.64e-17 83.6
MS.gene006089.t1 AT3G14100 27.473 182 112 5 210 390 60 222 3.24e-12 69.3
MS.gene006089.t1 AT5G19350 24.731 279 175 7 31 279 25 298 7.69e-19 89.7
MS.gene006089.t1 AT5G19350 25.088 283 173 7 31 279 25 302 1.45e-18 89.0
MS.gene006089.t1 AT1G17370 27.491 291 178 10 109 381 49 324 1.34e-16 82.8
MS.gene006089.t1 AT1G17370 25.540 278 162 9 26 270 50 315 4.59e-16 81.3
MS.gene006089.t1 AT1G17370 26.871 294 179 10 109 381 49 327 2.86e-16 82.0
MS.gene006089.t1 AT1G17370 25.623 281 161 9 26 270 50 318 5.41e-16 81.3
MS.gene006089.t1 AT1G47500 30.058 173 111 6 29 191 102 274 4.79e-16 80.1
MS.gene006089.t1 AT4G00830 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
MS.gene006089.t1 AT4G00830 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
MS.gene006089.t1 AT4G00830 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
MS.gene006089.t1 AT4G00830 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
MS.gene006089.t1 AT4G00830 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
MS.gene006089.t1 AT4G00830 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
MS.gene006089.t1 AT2G37220 27.419 186 107 3 32 190 93 277 2.15e-15 77.8
MS.gene006089.t1 AT4G00830 25.830 271 184 6 26 294 112 367 2.99e-15 79.3
MS.gene006089.t1 AT4G00830 24.874 398 236 14 120 494 118 475 4.22e-14 75.5
MS.gene006089.t1 AT4G00830 25.830 271 184 6 26 294 112 367 2.99e-15 79.3
MS.gene006089.t1 AT4G00830 24.874 398 236 14 120 494 118 475 4.22e-14 75.5
MS.gene006089.t1 AT1G47490 30.058 173 111 6 29 191 100 272 3.36e-15 77.4
MS.gene006089.t1 AT4G24770 32.979 188 111 6 211 395 152 327 1.36e-14 75.9
MS.gene006089.t1 AT4G24770 28.324 173 115 3 26 190 146 317 3.39e-12 68.6
MS.gene006089.t1 AT4G24770 32.979 188 111 6 211 395 152 327 1.36e-14 75.9
MS.gene006089.t1 AT4G24770 28.324 173 115 3 26 190 146 317 3.39e-12 68.6
MS.gene006089.t1 AT1G01080 29.843 191 118 6 104 280 95 283 2.86e-14 74.3
MS.gene006089.t1 AT1G01080 30.978 184 111 6 104 273 95 276 6.49e-14 73.2
MS.gene006089.t1 AT1G01080 29.688 192 118 6 104 280 95 284 1.02e-13 72.8
MS.gene006089.t1 AT4G00830 24.311 399 245 14 120 494 118 483 1.06e-13 74.3
MS.gene006089.t1 AT4G00830 24.818 274 191 6 26 294 112 375 2.41e-12 70.1
MS.gene006089.t1 AT2G35410 27.419 186 120 4 211 390 97 273 2.63e-13 71.6
MS.gene006089.t1 AT2G44710 22.677 269 183 8 32 287 216 472 3.11e-13 73.6
MS.gene006089.t1 AT2G44710 22.677 269 183 8 32 287 216 472 3.11e-13 73.6
MS.gene006089.t1 AT2G44710 22.677 269 183 8 32 287 131 387 3.31e-13 73.6
MS.gene006089.t1 AT3G52380 24.000 175 109 3 32 186 118 288 4.46e-13 71.2
MS.gene006089.t1 AT3G52380 30.052 193 108 8 118 292 116 299 1.32e-11 66.6
MS.gene006089.t1 AT3G52380 29.032 186 126 5 211 393 118 300 5.72e-11 64.7
MS.gene006089.t1 AT3G52150 31.319 182 95 6 211 378 78 243 5.83e-13 69.7
MS.gene006089.t1 AT3G52150 25.434 173 115 3 32 190 78 250 7.48e-11 63.5
MS.gene006089.t1 AT3G52150 31.319 182 95 6 211 378 78 243 5.83e-13 69.7
MS.gene006089.t1 AT3G52150 25.434 173 115 3 32 190 78 250 7.48e-11 63.5
MS.gene006089.t1 AT5G50250 30.890 191 119 6 206 394 110 289 5.97e-13 70.5
MS.gene006089.t1 AT5G50250 28.333 180 117 4 30 201 113 288 1.22e-12 69.3
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.70e-13 71.6
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.70e-13 71.6
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.70e-13 71.6
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.70e-13 71.6
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.70e-13 71.6
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
MS.gene006089.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
MS.gene006089.t1 AT3G52660 22.177 248 179 4 26 267 88 327 3.65e-12 69.3
MS.gene006089.t1 AT3G52660 22.177 248 179 4 26 267 88 327 3.65e-12 69.3
MS.gene006089.t1 AT3G52660 22.177 248 179 4 26 267 88 327 3.65e-12 69.3
MS.gene006089.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.70e-12 69.3
MS.gene006089.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.70e-12 69.3
MS.gene006089.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.70e-12 69.3
MS.gene006089.t1 AT4G26650 25.405 185 112 6 211 378 14 189 5.33e-12 68.9
MS.gene006089.t1 AT1G60000 25.698 179 126 3 18 190 73 250 5.44e-12 67.0
MS.gene006089.t1 AT4G26650 25.405 185 112 6 211 378 17 192 5.99e-12 68.6
MS.gene006089.t1 AT3G19350 48.485 66 33 1 554 619 23 87 6.97e-12 62.8
MS.gene006089.t1 AT5G47620 26.702 191 117 7 211 378 8 198 7.35e-12 68.6
MS.gene006089.t1 AT1G45100 27.684 177 111 3 196 370 143 304 8.98e-12 68.2
MS.gene006089.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene006089.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene006089.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene006089.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene006089.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene006089.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene006089.t1 AT4G19610 30.636 173 109 5 109 272 595 765 1.73e-11 67.8
MS.gene006089.t1 AT4G13850 41.333 75 43 1 117 190 34 108 1.83e-11 62.8
MS.gene006089.t1 AT3G46020 34.737 95 61 1 313 406 7 101 1.89e-11 61.6
MS.gene006089.t1 AT4G13850 41.333 75 43 1 117 190 34 108 2.24e-11 62.8
MS.gene006089.t1 AT4G13850 41.333 75 43 1 117 190 34 108 2.50e-11 62.8
MS.gene006089.t1 AT4G36960 29.940 167 104 6 119 278 4 164 2.64e-11 66.2
MS.gene006089.t1 AT4G36960 29.940 167 104 6 119 278 4 164 2.64e-11 66.2
MS.gene006089.t1 AT5G03580 39.241 79 47 1 207 285 15 92 6.27e-11 60.1

Find 186 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCTGGCTGCAGGGCTTCC+TGG 0.125743 1.4:+75876116 MS.gene006089:CDS
CCCTGTCTTTGGAGCTGATA+TGG 0.234302 1.4:-75876290 None:intergenic
CTCCAAAGACAGGGTCAAAA+TGG 0.262200 1.4:+75876299 MS.gene006089:CDS
CATACCATGCGCTGATTGTC+TGG 0.263859 1.4:-75876635 None:intergenic
CATTTGTCCTAACCCTTTCC+TGG 0.268295 1.4:-75874788 None:intergenic
CCACCTCAGCCTGCTGGATT+TGG 0.272099 1.4:+75876209 MS.gene006089:CDS
CGCTCAGGTTGTTTCAATTA+GGG 0.273509 1.4:+75873375 MS.gene006089:CDS
TCGCTCAGGTTGTTTCAATT+AGG 0.283695 1.4:+75873374 MS.gene006089:CDS
CGCTGGCTGCAGGGCTTCCT+GGG 0.283699 1.4:+75876117 MS.gene006089:CDS
CCGATGACATTTGATGGTTC+TGG 0.284750 1.4:+75876539 MS.gene006089:CDS
CACATACACATTAGTGAACT+TGG 0.296288 1.4:-75874817 None:intergenic
GGGCTTCCTGGGTACCATCC+AGG 0.299327 1.4:+75876128 MS.gene006089:CDS
ATCCATGCCATTTCGATTGT+TGG 0.315102 1.4:-75876498 None:intergenic
ACTGCAGCAGCAGCTGAATC+TGG 0.336443 1.4:-75874975 None:intergenic
GGAATGGCACCGCTGGCTGC+AGG 0.341384 1.4:+75876107 MS.gene006089:CDS
TACCGCTTTATTTGCTTCCT+CGG 0.346237 1.4:-75875459 None:intergenic
TTGGAACTGTAACATCTTGC+AGG 0.347871 1.4:+75875207 MS.gene006089:CDS
CCCTGGTGGAATGGCACCGC+TGG 0.351683 1.4:+75876100 MS.gene006089:CDS
CAACCAAGGGTATAGATATA+TGG 0.354482 1.4:+75876475 MS.gene006089:CDS
CATGGTCATAGCAAGGGTTC+TGG 0.362998 1.4:+75875416 MS.gene006089:CDS
AATGGGAAATCTAGATGCTT+TGG 0.369454 1.4:+75874933 MS.gene006089:CDS
AAAGGTCTCTGAGGCATTGC+AGG 0.369465 1.4:+75877204 MS.gene006089:CDS
GCTGCAGTTGAGAAGTTAAA+TGG 0.370195 1.4:+75874990 MS.gene006089:CDS
ACCTTTGCAGTATGTTGGTT+TGG 0.374003 1.4:-75877109 None:intergenic
CATGCCATCCAACTGTTTGA+TGG 0.376643 1.4:-75874721 None:intergenic
GCCCCTCAGCAGTTGTATTA+CGG 0.376872 1.4:+75876164 MS.gene006089:CDS
AGAGAGGAAGGCTCAGTTGC+AGG 0.377439 1.4:+75875628 MS.gene006089:CDS
TGAGAAAACATGATACGAAT+AGG 0.384527 1.4:-75874498 None:intergenic
TGGCCCTGTACTTTCTTGTA+AGG 0.384907 1.4:+75874623 MS.gene006089:CDS
CGGATAGGTGCTCGACGAAA+TGG 0.388336 1.4:+75876326 MS.gene006089:CDS
ATGTTGCCGATGACATTTGA+TGG 0.389353 1.4:+75876533 MS.gene006089:CDS
GGCTTCCTGGGTACCATCCA+GGG 0.399660 1.4:+75876129 MS.gene006089:CDS
GACAGTAATGGTCAGTCAAA+AGG 0.400879 1.4:+75874654 MS.gene006089:CDS
GGGGCAAGTCTTGGTGCCCC+TGG 0.404417 1.4:-75876146 None:intergenic
GCAACACCAGGCCGCATTCC+AGG 0.405751 1.4:-75876251 None:intergenic
TTCCAGCAGCAGATCTTGCC+TGG 0.414251 1.4:+75876233 MS.gene006089:CDS
CAGGAAAGGGTTAGGACAAA+TGG 0.422143 1.4:+75874789 MS.gene006089:CDS
CCGGTCAATGCTGCCGTCGC+CGG 0.426455 1.4:-75873265 None:intergenic
ATGATAAACAAGTCTATGTT+GGG 0.427846 1.4:+75874751 MS.gene006089:CDS
CTCAACGTGATCCAAGTGTT+CGG 0.429454 1.4:+75874517 MS.gene006089:CDS
CTCAACTTCACTCCTCTGAA+TGG 0.432562 1.4:+75874471 MS.gene006089:CDS
TGATATGGCATAACAAAATT+CGG 0.436617 1.4:-75876275 None:intergenic
GATTCTGCTGCACATGTTGG+AGG 0.441316 1.4:-75876352 None:intergenic
TTCGCCACCAGGAAAGGGTT+AGG 0.441421 1.4:+75874781 MS.gene006089:CDS
AAAGCCTTTGTTTGTTGCTG+TGG 0.442545 1.4:+75875592 MS.gene006089:CDS
TGGCCATATATCTATACCCT+TGG 0.446363 1.4:-75876478 None:intergenic
ATCTTGCCTGGAATGCGGCC+TGG 0.447751 1.4:+75876245 MS.gene006089:CDS
GTTGCATTATTAGGTGATGT+TGG 0.448677 1.4:+75875388 MS.gene006089:intron
GCCATATCAGCTCCAAAGAC+AGG 0.451036 1.4:+75876289 MS.gene006089:CDS
AATTCTTTCCTGCTCGAACT+TGG 0.452537 1.4:-75875090 None:intergenic
CAAGTCTTGGTGCCCCTGGA+TGG 0.453330 1.4:-75876142 None:intergenic
TGCTTCCTCGGGAGTAGAAA+AGG 0.455695 1.4:-75875447 None:intergenic
ACAGTCATGAAAGATGCAAA+TGG 0.458938 1.4:+75874915 MS.gene006089:CDS
CCCTGTACTTTCTTGTAAGG+TGG 0.459223 1.4:+75874626 MS.gene006089:CDS
TTGTTTCAATTAGGGTCTGT+AGG 0.459272 1.4:+75873383 MS.gene006089:CDS
GTCTCCGAATGTGGTGGCTC+CGG 0.462851 1.4:+75873246 MS.gene006089:CDS
GACAGGGATGTTGCTTGAAA+TGG 0.465292 1.4:+75877132 MS.gene006089:CDS
AATGATAAACAAGTCTATGT+TGG 0.465684 1.4:+75874750 MS.gene006089:CDS
CCTGGACGCTGATTATCAAT+AGG 0.467031 1.4:-75876575 None:intergenic
TTCATACCACCTCAGCCTGC+TGG 0.468479 1.4:+75876203 MS.gene006089:CDS
CGCATTCACGAACGGTCCTC+CGG 0.469198 1.4:-75873284 None:intergenic
GTCGCCGGAGCCACCACATT+CGG 0.473001 1.4:-75873250 None:intergenic
CCGGCGACGGCAGCATTGAC+CGG 0.477791 1.4:+75873265 MS.gene006089:CDS
GTCCTTCATGAAGCTGCATC+GGG 0.478100 1.4:+75877226 MS.gene006089:CDS
ACCGCTTTATTTGCTTCCTC+GGG 0.479649 1.4:-75875458 None:intergenic
GCCAGCGGTGCCATTCCACC+AGG 0.481094 1.4:-75876101 None:intergenic
CTGTCACCTTTGCAGTATGT+TGG 0.481467 1.4:-75877114 None:intergenic
TAGCAAGGGTTCTGGTTTCG+TGG 0.481599 1.4:+75875424 MS.gene006089:CDS
TCAACTTCACTCCTCTGAAT+GGG 0.482554 1.4:+75874472 MS.gene006089:CDS
GAATGTGGTGGCTCCGGCGA+CGG 0.484230 1.4:+75873252 MS.gene006089:CDS
AACTGCTGAGGGGCAAGTCT+TGG 0.488367 1.4:-75876155 None:intergenic
TATATGGCCAACAATCGAAA+TGG 0.488751 1.4:+75876491 MS.gene006089:CDS
TTCCAGGCAAGATCTGCTGC+TGG 0.488761 1.4:-75876235 None:intergenic
GCACTAGTTATCTTGCCAAA+GGG 0.490127 1.4:-75874891 None:intergenic
GTTGAGAAGTTCCTTTGCAT+TGG 0.492750 1.4:-75874454 None:intergenic
CAACATACTGCAAAGGTGAC+AGG 0.494098 1.4:+75877115 MS.gene006089:CDS
GAATGGCACCGCTGGCTGCA+GGG 0.495319 1.4:+75876108 MS.gene006089:CDS
TCCAAAGACAGGGTCAAAAT+GGG 0.497020 1.4:+75876300 MS.gene006089:CDS
CAGACTAGGCGATCCTCTCT+TGG 0.498348 1.4:+75873409 MS.gene006089:CDS
TGTTTCAATTAGGGTCTGTA+GGG 0.499273 1.4:+75873384 MS.gene006089:CDS
CAATGTGTTCATTAAGAACC+TGG 0.502190 1.4:+75874554 MS.gene006089:CDS
CCTATTGATAATCAGCGTCC+AGG 0.504071 1.4:+75876575 MS.gene006089:CDS
AATCCGTTCCCCTGGTGGAA+TGG 0.506540 1.4:+75876091 MS.gene006089:CDS
TGTGATCAATTGATGTGTCC+AGG 0.506638 1.4:-75874572 None:intergenic
GATCCAAGTGTTCGGAAAAG+TGG 0.507647 1.4:+75874525 MS.gene006089:CDS
TCTGTTTAGCCAAGTCGCTC+AGG 0.509218 1.4:+75873360 MS.gene006089:CDS
CTTGATTCTGCTGCACATGT+TGG 0.509410 1.4:-75876355 None:intergenic
GTCCAGTTGAATGAAATGAA+TGG 0.510076 1.4:+75875554 MS.gene006089:intron
TTTGCTCAAATCCGTTCCCC+TGG 0.511063 1.4:+75876083 MS.gene006089:CDS
AGTGTTCGGAAAAGTGGATC+GGG 0.517337 1.4:+75874531 MS.gene006089:CDS
ATACCATGCGCTGATTGTCT+GGG 0.517628 1.4:-75876634 None:intergenic
GGTCCTTCATGAAGCTGCAT+CGG 0.518569 1.4:+75877225 MS.gene006089:CDS
ACAGTAATGGTCAGTCAAAA+GGG 0.518664 1.4:+75874655 MS.gene006089:CDS
TCAAATGTCATCGGCAACAT+TGG 0.519004 1.4:-75876530 None:intergenic
AACAGATATGAGAAATTGCA+AGG 0.520125 1.4:+75875113 MS.gene006089:CDS
GGCTGAGGTGGTATGAAGCC+AGG 0.520624 1.4:-75876197 None:intergenic
TTTACGTTGGCGATCTCGAA+GGG 0.520934 1.4:+75873311 MS.gene006089:CDS
TGTCAACTTCACCAATGCTC+AGG 0.521040 1.4:+75873441 MS.gene006089:CDS
CATATATCTATACCCTTGGT+TGG 0.521460 1.4:-75876474 None:intergenic
TCTGAAGTTGGTGATCAGCT+TGG 0.524358 1.4:+75877250 MS.gene006089:CDS
GAATGAAATGAATGGAAAGT+TGG 0.530915 1.4:+75875562 MS.gene006089:CDS
GTGCCATTCCACCAGGGGAA+CGG 0.531086 1.4:-75876094 None:intergenic
GCCACCTTACAAGAAAGTAC+AGG 0.531089 1.4:-75874627 None:intergenic
TGCACTAGTTATCTTGCCAA+AGG 0.533023 1.4:-75874892 None:intergenic
CAGTCATGAAAGATGCAAAT+GGG 0.535240 1.4:+75874916 MS.gene006089:CDS
CTTTACGTTGGCGATCTCGA+AGG 0.535531 1.4:+75873310 MS.gene006089:CDS
CCAAATCCAGCAGGCTGAGG+TGG 0.536975 1.4:-75876209 None:intergenic
TGCTGGAAACCAAATCCAGC+AGG 0.541904 1.4:-75876218 None:intergenic
TATTACGGTCAAGGCACACC+TGG 0.547147 1.4:+75876179 MS.gene006089:CDS
GGTGCCCCTGGATGGTACCC+AGG 0.551085 1.4:-75876134 None:intergenic
AATGGTCAGTCAAAAGGGTA+TGG 0.555474 1.4:+75874660 MS.gene006089:CDS
TTGAAACAACCTGAGCGACT+TGG 0.559301 1.4:-75873369 None:intergenic
CGAATAGGTTTCCCATTCAG+AGG 0.559642 1.4:-75874483 None:intergenic
GCTTCCTGGGTACCATCCAG+GGG 0.561102 1.4:+75876130 MS.gene006089:CDS
ACATACACATTAGTGAACTT+GGG 0.561743 1.4:-75874816 None:intergenic
ACAAAATTCGGAGCAACACC+AGG 0.561825 1.4:-75876263 None:intergenic
CCAGGAAGCCCTGCAGCCAG+CGG 0.562572 1.4:-75876116 None:intergenic
GCTCAAATCCGTTCCCCTGG+TGG 0.562712 1.4:+75876086 MS.gene006089:CDS
CGAAATGGCATGGATCTAGC+AGG 0.564881 1.4:+75876506 MS.gene006089:CDS
GGATTCACATGGTCATAGCA+AGG 0.565505 1.4:+75875409 MS.gene006089:CDS
GGTCAAAATGGGCAACGGAT+AGG 0.565521 1.4:+75876311 MS.gene006089:CDS
AATTGAAATTATCAGATGCT+CGG 0.569025 1.4:+75877052 MS.gene006089:intron
TAAGATGAATCACTTCGGAT+TGG 0.570286 1.4:-75877156 None:intergenic
GGCCAACAATCGAAATGGCA+TGG 0.570608 1.4:+75876496 MS.gene006089:CDS
TTCAATAAGATGAATCACTT+CGG 0.573383 1.4:-75877161 None:intergenic
AAACTCACCATCCTGAGCAT+TGG 0.573445 1.4:-75873452 None:intergenic
TTGCATCGTAACTCCAACCA+AGG 0.573794 1.4:+75876461 MS.gene006089:CDS
GACCGTAATACAACTGCTGA+GGG 0.575479 1.4:-75876166 None:intergenic
ATCCCGATGCAGCTTCATGA+AGG 0.575668 1.4:-75877228 None:intergenic
GAGGCAAGTGATGTAGACCC+TGG 0.581109 1.4:-75876593 None:intergenic
AAGTGTTCGGAAAAGTGGAT+CGG 0.582522 1.4:+75874530 MS.gene006089:CDS
CAGCAGTTGTATTACGGTCA+AGG 0.584506 1.4:+75876170 MS.gene006089:CDS
GGCTGCGATTTCATCACCGA+TGG 0.587268 1.4:+75873219 MS.gene006089:CDS
TGGAACTGTAACATCTTGCA+GGG 0.587771 1.4:+75875208 MS.gene006089:CDS
AAACCAAATCCAGCAGGCTG+AGG 0.590059 1.4:-75876212 None:intergenic
GACATAAGCGTAACCAAGAG+AGG 0.592663 1.4:-75873422 None:intergenic
CCAGAACCATCAAATGTCAT+CGG 0.594053 1.4:-75876539 None:intergenic
CCATATCAGCTCCAAAGACA+GGG 0.596118 1.4:+75876290 MS.gene006089:CDS
AACATACTGCAAAGGTGACA+GGG 0.597579 1.4:+75877116 MS.gene006089:CDS
GTTGAAAGCCAAGTTCGAGC+AGG 0.598139 1.4:+75875082 MS.gene006089:CDS
CTATTGATAATCAGCGTCCA+GGG 0.600399 1.4:+75876576 MS.gene006089:CDS
CACTAGTTATCTTGCCAAAG+GGG 0.600793 1.4:-75874890 None:intergenic
GCTGCATCGGGATCTGAAGT+TGG 0.602004 1.4:+75877238 MS.gene006089:CDS
TTCTGAAGCATCAACTGATG+AGG 0.602081 1.4:+75874848 MS.gene006089:CDS
GATTCACATGGTCATAGCAA+GGG 0.602587 1.4:+75875410 MS.gene006089:CDS
TCAGCGCAAAGAAGAGAGGA+AGG 0.604652 1.4:+75875616 MS.gene006089:CDS
AAAGAGTGCCATCAAACAGT+TGG 0.606237 1.4:+75874713 MS.gene006089:CDS
AGCAGATCTTGCCTGGAATG+CGG 0.606792 1.4:+75876240 MS.gene006089:CDS
GACAGGGTCAAAATGGGCAA+CGG 0.607936 1.4:+75876306 MS.gene006089:CDS
GATGGTTCAGTCTCCGAATG+TGG 0.608912 1.4:+75873237 MS.gene006089:CDS
TAAAGTGACGCATTCACGAA+CGG 0.610365 1.4:-75873292 None:intergenic
CAGCGGTGCCATTCCACCAG+GGG 0.613136 1.4:-75876099 None:intergenic
CCACCTTACAAGAAAGTACA+GGG 0.613727 1.4:-75874626 None:intergenic
AACTTCACCAATGCTCAGGA+TGG 0.614190 1.4:+75873445 MS.gene006089:CDS
GTGAATGCGTCACTTTACGT+TGG 0.616829 1.4:+75873298 MS.gene006089:CDS
TGAAATGAATGGAAAGTTGG+TGG 0.617759 1.4:+75875565 MS.gene006089:CDS
TTGGTGTAAGACAGTCCACA+AGG 0.620718 1.4:-75877090 None:intergenic
TGAGCCACAGCAACAAACAA+AGG 0.620998 1.4:-75875596 None:intergenic
GGTTCAGTCTCCGAATGTGG+TGG 0.623008 1.4:+75873240 MS.gene006089:CDS
AGTGCCATCAAACAGTTGGA+TGG 0.623280 1.4:+75874717 MS.gene006089:CDS
ACAGATATGAGAAATTGCAA+GGG 0.623843 1.4:+75875114 MS.gene006089:CDS
TGGCTCAGCGCAAAGAAGAG+AGG 0.624005 1.4:+75875612 MS.gene006089:CDS
GGGTCTGTAGGGATCAGACT+AGG 0.624207 1.4:+75873395 MS.gene006089:CDS
TGACCGTAATACAACTGCTG+AGG 0.627393 1.4:-75876167 None:intergenic
AACTGCTATCAATGATGACA+AGG 0.629314 1.4:+75875013 MS.gene006089:CDS
ACATTCGGAGACTGAACCAT+CGG 0.635247 1.4:-75873235 None:intergenic
TTGTCCTAACCCTTTCCTGG+TGG 0.635698 1.4:-75874785 None:intergenic
ACCAAACCAACATACTGCAA+AGG 0.637186 1.4:+75877108 MS.gene006089:CDS
GAAATGAATGGAAAGTTGGT+GGG 0.639653 1.4:+75875566 MS.gene006089:CDS
TACCATGCGCTGATTGTCTG+GGG 0.640655 1.4:-75876633 None:intergenic
GGACACATCAATTGATCACA+AGG 0.641302 1.4:+75874575 MS.gene006089:CDS
TAGGTGATGTTGGATTCACA+TGG 0.645055 1.4:+75875398 MS.gene006089:intron
TGAACATCTATATCCCCTTG+TGG 0.645248 1.4:+75877075 MS.gene006089:CDS
TACCCCAGACAATCAGCGCA+TGG 0.646578 1.4:+75876631 MS.gene006089:CDS
GGTAGCAGAAGCTAAAGCAG+AGG 0.647511 1.4:-75876612 None:intergenic
CCAGCGGTGCCATTCCACCA+GGG 0.647668 1.4:-75876100 None:intergenic
TATTTGTGGGGAGGGCTCAG+AGG 0.651975 1.4:+75875039 MS.gene006089:CDS
CTCGAAGGGAGTGTGAACGA+AGG 0.652910 1.4:+75873325 MS.gene006089:CDS
CAGATATGAGAAATTGCAAG+GGG 0.659567 1.4:+75875115 MS.gene006089:CDS
GGTGTAAGACAGTCCACAAG+GGG 0.660676 1.4:-75877088 None:intergenic
AAGGTGGCTCTTGACAGTAA+TGG 0.676259 1.4:+75874642 MS.gene006089:CDS
TCCCGAGGAAGCAAATAAAG+CGG 0.679076 1.4:+75875457 MS.gene006089:CDS
GCGACGGCAGCATTGACCGG+AGG 0.692922 1.4:+75873268 MS.gene006089:CDS
TGGTGTAAGACAGTCCACAA+GGG 0.698176 1.4:-75877089 None:intergenic
TGCATCGTAACTCCAACCAA+GGG 0.699834 1.4:+75876462 MS.gene006089:CDS
ACCGTAATACAACTGCTGAG+GGG 0.736849 1.4:-75876165 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAATAAATGTTTAAA+GGG - chr1.4:75875974-75875993 None:intergenic 10.0%
!! GTTTGAATAATTTAATTAAA+GGG - chr1.4:75876764-75876783 None:intergenic 10.0%
!! TAGTTATTAAAAATATCTTA+TGG + chr1.4:75874384-75874403 MS.gene006089:intron 10.0%
!! TGTTTGAATAATTTAATTAA+AGG - chr1.4:75876765-75876784 None:intergenic 10.0%
!!! ATCATTTTCTTAAAATTTTA+TGG - chr1.4:75873820-75873839 None:intergenic 10.0%
!!! TATTAATTTGTATTATTTGA+CGG + chr1.4:75874230-75874249 MS.gene006089:intron 10.0%
!! AAAAATCAAGAAACAAAAAT+AGG - chr1.4:75874428-75874447 None:intergenic 15.0%
!! AAAAATGAATATTTCAACAA+AGG - chr1.4:75875759-75875778 None:intergenic 15.0%
!! AAATTATATGTTGCATTATT+AGG + chr1.4:75875379-75875398 MS.gene006089:intron 15.0%
!! AGTTTATTCATAAAATCAAT+GGG + chr1.4:75876027-75876046 MS.gene006089:intron 15.0%
!! CATAATAATTAATATATGGA+TGG + chr1.4:75874338-75874357 MS.gene006089:intron 15.0%
!! CATCCATAATAATTAATATA+TGG + chr1.4:75874334-75874353 MS.gene006089:intron 15.0%
!! CATCCATATATTAATTATTA+TGG - chr1.4:75874340-75874359 None:intergenic 15.0%
!! GAAAGTAAATAAATGTTTAA+AGG - chr1.4:75875975-75875994 None:intergenic 15.0%
!! TTATAAATTAACTGATACAA+AGG - chr1.4:75876994-75877013 None:intergenic 15.0%
!!! TATTCATTTTTGCTTATAAT+TGG + chr1.4:75875822-75875841 MS.gene006089:intron 15.0%
!! AATAAATGTTTAAAGGGAAA+CGG - chr1.4:75875968-75875987 None:intergenic 20.0%
!! AATAGATACAACTATAAACA+AGG - chr1.4:75874134-75874153 None:intergenic 20.0%
!! ATAAAATTGACCAGTAAAAA+AGG - chr1.4:75875339-75875358 None:intergenic 20.0%
!! ATAAATACATAAAAATGGGT+TGG - chr1.4:75874168-75874187 None:intergenic 20.0%
!! ATGATATGAATAATGAATCT+CGG - chr1.4:75874049-75874068 None:intergenic 20.0%
!! GAGTTTATTCATAAAATCAA+TGG + chr1.4:75876026-75876045 MS.gene006089:intron 20.0%
!! TCATATGCATAATTTAAACA+CGG + chr1.4:75876857-75876876 MS.gene006089:intron 20.0%
!! TCTAATAAGTCATTCTATAT+AGG - chr1.4:75874020-75874039 None:intergenic 20.0%
!!! ACTTGTTTTCTATTTTTTCT+TGG + chr1.4:75876925-75876944 MS.gene006089:intron 20.0%
!!! TTAACTGTTTCTTGTTAATT+TGG + chr1.4:75873525-75873544 MS.gene006089:intron 20.0%
! AATAAATATATGCAGAGAGA+CGG - chr1.4:75875258-75875277 None:intergenic 25.0%
! AATGATAAACAAGTCTATGT+TGG + chr1.4:75874750-75874769 MS.gene006089:CDS 25.0%
! AATTGAAATTATCAGATGCT+CGG + chr1.4:75877052-75877071 MS.gene006089:intron 25.0%
! ATAAATGTTTAAAGGGAAAC+GGG - chr1.4:75875967-75875986 None:intergenic 25.0%
! ATCATCTATGTGTTGTAATT+TGG + chr1.4:75873576-75873595 MS.gene006089:intron 25.0%
! ATGATAAACAAGTCTATGTT+GGG + chr1.4:75874751-75874770 MS.gene006089:CDS 25.0%
! ATGTTCCTTTCTCAAATTAT+CGG - chr1.4:75873714-75873733 None:intergenic 25.0%
! ATTAAAGGGTTAAAATTGTG+AGG - chr1.4:75876750-75876769 None:intergenic 25.0%
! ATTGTTTCCTTAGAGTAAAT+TGG + chr1.4:75876698-75876717 MS.gene006089:intron 25.0%
! GTATATAATGCACACAAAAA+AGG - chr1.4:75875306-75875325 None:intergenic 25.0%
! TGATATGGCATAACAAAATT+CGG - chr1.4:75876278-75876297 None:intergenic 25.0%
! TTATTCATAAAATCAATGGG+TGG + chr1.4:75876030-75876049 MS.gene006089:intron 25.0%
! TTCAATAAGATGAATCACTT+CGG - chr1.4:75877164-75877183 None:intergenic 25.0%
! TTTAACGGCATATTAATGTT+GGG + chr1.4:75874188-75874207 MS.gene006089:intron 25.0%
!! AAAGATCTATTTTCTGAGTT+TGG + chr1.4:75875188-75875207 MS.gene006089:CDS 25.0%
!! GTGTGAGAAATGTAATTTTT+CGG + chr1.4:75877021-75877040 MS.gene006089:intron 25.0%
!! TTTTAACGGCATATTAATGT+TGG + chr1.4:75874187-75874206 MS.gene006089:intron 25.0%
!!! CATTTGGTATTTTTACATGT+AGG + chr1.4:75876667-75876686 MS.gene006089:intron 25.0%
!!! TAACAAGTTATTTTCTCTGT+AGG + chr1.4:75876055-75876074 MS.gene006089:intron 25.0%
!!! TTTGTTTCTTGATTTTTCAG+CGG + chr1.4:75874431-75874450 MS.gene006089:intron 25.0%
AACAGATATGAGAAATTGCA+AGG + chr1.4:75875113-75875132 MS.gene006089:CDS 30.0%
AATCCAGATGAACAATTGTA+AGG + chr1.4:75874091-75874110 MS.gene006089:intron 30.0%
ACAGATATGAGAAATTGCAA+GGG + chr1.4:75875114-75875133 MS.gene006089:CDS 30.0%
ACATACACATTAGTGAACTT+GGG - chr1.4:75874819-75874838 None:intergenic 30.0%
ATGAACAATTGTAAGGATGA+AGG + chr1.4:75874098-75874117 MS.gene006089:intron 30.0%
ATTGTACAAAGCTAAGTGTT+GGG + chr1.4:75873972-75873991 MS.gene006089:intron 30.0%
ATTTACTTTCACAGTTCTCA+TGG + chr1.4:75875985-75876004 MS.gene006089:intron 30.0%
CAGAATACCAATTTACTCTA+AGG - chr1.4:75876708-75876727 None:intergenic 30.0%
GAATGAAATGAATGGAAAGT+TGG + chr1.4:75875562-75875581 MS.gene006089:CDS 30.0%
GAGCATCTGATAATTTCAAT+TGG - chr1.4:75877053-75877072 None:intergenic 30.0%
TGAGAAAACATGATACGAAT+AGG - chr1.4:75874501-75874520 None:intergenic 30.0%
TGGCTATAGCTTATAATTAG+TGG + chr1.4:75875719-75875738 MS.gene006089:intron 30.0%
TGGTATGTATAAGTTGCATT+TGG + chr1.4:75876651-75876670 MS.gene006089:intron 30.0%
TTAACGGCATATTAATGTTG+GGG + chr1.4:75874189-75874208 MS.gene006089:intron 30.0%
TTCATTATTAAGTAGCTGAC+TGG + chr1.4:75875699-75875718 MS.gene006089:intron 30.0%
TTCCATTCATTTCATTCAAC+TGG - chr1.4:75875559-75875578 None:intergenic 30.0%
TTGAGGTACATTACTAACTA+AGG + chr1.4:75876886-75876905 MS.gene006089:intron 30.0%
TTTAAACACGGATCAAATTG+AGG + chr1.4:75876869-75876888 MS.gene006089:intron 30.0%
! AAATTTGTGCACAGATTTTG+TGG - chr1.4:75874275-75874294 None:intergenic 30.0%
! AATCGTCATCAAGATTTTTC+AGG - chr1.4:75875151-75875170 None:intergenic 30.0%
! ACTGTTGTTATCATAGGTTT+TGG + chr1.4:75874361-75874380 MS.gene006089:intron 30.0%
!! ATATTAATGTTGGGGGTATT+AGG + chr1.4:75874197-75874216 MS.gene006089:intron 30.0%
!!! ATGACAAGGTTTTATTTGTG+GGG + chr1.4:75875027-75875046 MS.gene006089:CDS 30.0%
!!! CTCAGAGACCTTTATTTTTA+GGG - chr1.4:75877197-75877216 None:intergenic 30.0%
!!! GATGACAAGGTTTTATTTGT+GGG + chr1.4:75875026-75875045 MS.gene006089:CDS 30.0%
!!! TGATGACAAGGTTTTATTTG+TGG + chr1.4:75875025-75875044 MS.gene006089:CDS 30.0%
!!! TTCCAACATACCTTTTTTAC+TGG + chr1.4:75875326-75875345 MS.gene006089:intron 30.0%
AACTGCTATCAATGATGACA+AGG + chr1.4:75875013-75875032 MS.gene006089:CDS 35.0%
AATGGGAAATCTAGATGCTT+TGG + chr1.4:75874933-75874952 MS.gene006089:CDS 35.0%
ACAGTAATGGTCAGTCAAAA+GGG + chr1.4:75874655-75874674 MS.gene006089:CDS 35.0%
ACAGTCATGAAAGATGCAAA+TGG + chr1.4:75874915-75874934 MS.gene006089:CDS 35.0%
ATTGTGATCATGTGTCATGT+TGG + chr1.4:75873739-75873758 MS.gene006089:intron 35.0%
CAATGTGTTCATTAAGAACC+TGG + chr1.4:75874554-75874573 MS.gene006089:CDS 35.0%
CACATACACATTAGTGAACT+TGG - chr1.4:75874820-75874839 None:intergenic 35.0%
CAGATATGAGAAATTGCAAG+GGG + chr1.4:75875115-75875134 MS.gene006089:CDS 35.0%
CAGTCATGAAAGATGCAAAT+GGG + chr1.4:75874916-75874935 MS.gene006089:CDS 35.0%
CATATATCTATACCCTTGGT+TGG - chr1.4:75876477-75876496 None:intergenic 35.0%
CATCCTTACAATTGTTCATC+TGG - chr1.4:75874097-75874116 None:intergenic 35.0%
CATTCCTTTATGAATCCTCA+TGG + chr1.4:75875923-75875942 MS.gene006089:intron 35.0%
CATTGTACAAAGCTAAGTGT+TGG + chr1.4:75873971-75873990 MS.gene006089:intron 35.0%
GTAATCACAAGTGTCAGTAT+CGG + chr1.4:75873850-75873869 MS.gene006089:intron 35.0%
GTCCAGTTGAATGAAATGAA+TGG + chr1.4:75875554-75875573 MS.gene006089:intron 35.0%
GTTGCATTATTAGGTGATGT+TGG + chr1.4:75875388-75875407 MS.gene006089:intron 35.0%
TAACGGCATATTAATGTTGG+GGG + chr1.4:75874190-75874209 MS.gene006089:intron 35.0%
TAAGATGAATCACTTCGGAT+TGG - chr1.4:75877159-75877178 None:intergenic 35.0%
TATATGGCCAACAATCGAAA+TGG + chr1.4:75876491-75876510 MS.gene006089:CDS 35.0%
TCAACCATGAGGATTCATAA+AGG - chr1.4:75875930-75875949 None:intergenic 35.0%
TGAAATGAATGGAAAGTTGG+TGG + chr1.4:75875565-75875584 MS.gene006089:CDS 35.0%
TGTTGGACACTAACATGTAT+CGG + chr1.4:75873756-75873775 MS.gene006089:intron 35.0%
TGTTTCAATTAGGGTCTGTA+GGG + chr1.4:75873384-75873403 MS.gene006089:CDS 35.0%
TTGTTTCAATTAGGGTCTGT+AGG + chr1.4:75873383-75873402 MS.gene006089:CDS 35.0%
! AAGAATCTTTGTAGCATCGA+AGG - chr1.4:75873948-75873967 None:intergenic 35.0%
! ACGTCTTCAATAAGAAGTGT+CGG + chr1.4:75873899-75873918 MS.gene006089:intron 35.0%
! ATTTGTGTCGATGTTATGTC+CGG - chr1.4:75873789-75873808 None:intergenic 35.0%
! CAACCAAGGGTATAGATATA+TGG + chr1.4:75876475-75876494 MS.gene006089:CDS 35.0%
! GAAATGAATGGAAAGTTGGT+GGG + chr1.4:75875566-75875585 MS.gene006089:CDS 35.0%
! GACCAGTAAAAAAGGTATGT+TGG - chr1.4:75875331-75875350 None:intergenic 35.0%
! GAGGACTTGAAACAACTTTT+TGG + chr1.4:75874867-75874886 MS.gene006089:CDS 35.0%
! TGTCTAAAACATCAACCATG+AGG - chr1.4:75875941-75875960 None:intergenic 35.0%
!! GTTACTCCTTTTGCCATTTA+TGG + chr1.4:75876791-75876810 MS.gene006089:intron 35.0%
!! TCCTTTTGCCATTTATGGTA+GGG + chr1.4:75876796-75876815 MS.gene006089:intron 35.0%
!!! ACCTTTATTTTTAGGGCATC+GGG - chr1.4:75877190-75877209 None:intergenic 35.0%
!!! GACCTTTATTTTTAGGGCAT+CGG - chr1.4:75877191-75877210 None:intergenic 35.0%
AACATACTGCAAAGGTGACA+GGG + chr1.4:75877116-75877135 MS.gene006089:CDS 40.0%
AAGTGTTCGGAAAAGTGGAT+CGG + chr1.4:75874530-75874549 MS.gene006089:CDS 40.0%
AATGGTCAGTCAAAAGGGTA+TGG + chr1.4:75874660-75874679 MS.gene006089:CDS 40.0%
AATTCTTTCCTGCTCGAACT+TGG - chr1.4:75875093-75875112 None:intergenic 40.0%
ACCAAACCAACATACTGCAA+AGG + chr1.4:75877108-75877127 MS.gene006089:CDS 40.0%
ACCCTACCATAAATGGCAAA+AGG - chr1.4:75876800-75876819 None:intergenic 40.0%
ACTTTCACAGTTCTCATGGT+CGG + chr1.4:75875989-75876008 MS.gene006089:intron 40.0%
ATACTACACATGTCAGACAC+TGG + chr1.4:75873873-75873892 MS.gene006089:intron 40.0%
ATGCTAGACCCTACCATAAA+TGG - chr1.4:75876807-75876826 None:intergenic 40.0%
ATGTTGCCGATGACATTTGA+TGG + chr1.4:75876533-75876552 MS.gene006089:CDS 40.0%
CACTAGTTATCTTGCCAAAG+GGG - chr1.4:75874893-75874912 None:intergenic 40.0%
CCACACCGATAATTTGAGAA+AGG + chr1.4:75873706-75873725 MS.gene006089:intron 40.0%
CCAGAACCATCAAATGTCAT+CGG - chr1.4:75876542-75876561 None:intergenic 40.0%
CCTTTCTCAAATTATCGGTG+TGG - chr1.4:75873709-75873728 None:intergenic 40.0%
GACAGTAATGGTCAGTCAAA+AGG + chr1.4:75874654-75874673 MS.gene006089:CDS 40.0%
GATTCACATGGTCATAGCAA+GGG + chr1.4:75875410-75875429 MS.gene006089:CDS 40.0%
GCACTAGTTATCTTGCCAAA+GGG - chr1.4:75874894-75874913 None:intergenic 40.0%
GCTGCAGTTGAGAAGTTAAA+TGG + chr1.4:75874990-75875009 MS.gene006089:CDS 40.0%
GGACACATCAATTGATCACA+AGG + chr1.4:75874575-75874594 MS.gene006089:CDS 40.0%
GGTAAGTATTCAAAGAAGCG+TGG + chr1.4:75875478-75875497 MS.gene006089:intron 40.0%
GTTGAGAAGTTCCTTTGCAT+TGG - chr1.4:75874457-75874476 None:intergenic 40.0%
TAAAGTGACGCATTCACGAA+CGG - chr1.4:75873295-75873314 None:intergenic 40.0%
TACTACACATGTCAGACACT+GGG + chr1.4:75873874-75873893 MS.gene006089:intron 40.0%
TAGGTGATGTTGGATTCACA+TGG + chr1.4:75875398-75875417 MS.gene006089:intron 40.0%
TCAAATGTCATCGGCAACAT+TGG - chr1.4:75876533-75876552 None:intergenic 40.0%
TCAACTTCACTCCTCTGAAT+GGG + chr1.4:75874472-75874491 MS.gene006089:CDS 40.0%
TCCAAAGACAGGGTCAAAAT+GGG + chr1.4:75876300-75876319 MS.gene006089:CDS 40.0%
TCCCGATGCCCTAAAAATAA+AGG + chr1.4:75877186-75877205 MS.gene006089:CDS 40.0%
TGAACATCTATATCCCCTTG+TGG + chr1.4:75877075-75877094 MS.gene006089:CDS 40.0%
TGCACTAGTTATCTTGCCAA+AGG - chr1.4:75874895-75874914 None:intergenic 40.0%
TGGAACTGTAACATCTTGCA+GGG + chr1.4:75875208-75875227 MS.gene006089:CDS 40.0%
TGGCCATATATCTATACCCT+TGG - chr1.4:75876481-75876500 None:intergenic 40.0%
TGTGATCAATTGATGTGTCC+AGG - chr1.4:75874575-75874594 None:intergenic 40.0%
TTGGAACTGTAACATCTTGC+AGG + chr1.4:75875207-75875226 MS.gene006089:CDS 40.0%
! AAAGCCTTTGTTTGTTGCTG+TGG + chr1.4:75875592-75875611 MS.gene006089:CDS 40.0%
! ACCTTTGCAGTATGTTGGTT+TGG - chr1.4:75877112-75877131 None:intergenic 40.0%
! ATCCATGCCATTTCGATTGT+TGG - chr1.4:75876501-75876520 None:intergenic 40.0%
! CCACCTTACAAGAAAGTACA+GGG - chr1.4:75874629-75874648 None:intergenic 40.0%
! CGCTCAGGTTGTTTCAATTA+GGG + chr1.4:75873375-75873394 MS.gene006089:CDS 40.0%
! CTATTGATAATCAGCGTCCA+GGG + chr1.4:75876576-75876595 MS.gene006089:CDS 40.0%
! TCGCTCAGGTTGTTTCAATT+AGG + chr1.4:75873374-75873393 MS.gene006089:CDS 40.0%
!! AAACAACTTTTTGGCCCCTT+TGG + chr1.4:75874876-75874895 MS.gene006089:CDS 40.0%
!! AAAGAGTGCCATCAAACAGT+TGG + chr1.4:75874713-75874732 MS.gene006089:CDS 40.0%
!! CTCCTTTTGCCATTTATGGT+AGG + chr1.4:75876795-75876814 MS.gene006089:intron 40.0%
!! GGATGGACTGTTGTTATCAT+AGG + chr1.4:75874355-75874374 MS.gene006089:intron 40.0%
!! TAATGTTGGGGGTATTAGGT+TGG + chr1.4:75874201-75874220 MS.gene006089:intron 40.0%
!! TACCGCTTTATTTGCTTCCT+CGG - chr1.4:75875462-75875481 None:intergenic 40.0%
!! TTCTGAAGCATCAACTGATG+AGG + chr1.4:75874848-75874867 MS.gene006089:CDS 40.0%
!!! ACAAGGTTTTATTTGTGGGG+AGG + chr1.4:75875030-75875049 MS.gene006089:CDS 40.0%
!!! CAAGGTTTTATTTGTGGGGA+GGG + chr1.4:75875031-75875050 MS.gene006089:CDS 40.0%
AAACTCACCATCCTGAGCAT+TGG - chr1.4:75873455-75873474 None:intergenic 45.0%
AACATGTATCGGACAGACAC+CGG + chr1.4:75873767-75873786 MS.gene006089:intron 45.0%
AACTTCACCAATGCTCAGGA+TGG + chr1.4:75873445-75873464 MS.gene006089:CDS 45.0%
AAGGTGGCTCTTGACAGTAA+TGG + chr1.4:75874642-75874661 MS.gene006089:CDS 45.0%
ACAAAATTCGGAGCAACACC+AGG - chr1.4:75876266-75876285 None:intergenic 45.0%
ACATTCGGAGACTGAACCAT+CGG - chr1.4:75873238-75873257 None:intergenic 45.0%
ACCGTAATACAACTGCTGAG+GGG - chr1.4:75876168-75876187 None:intergenic 45.0%
AGTGCCATCAAACAGTTGGA+TGG + chr1.4:75874717-75874736 MS.gene006089:CDS 45.0%
AGTGTTCGGAAAAGTGGATC+GGG + chr1.4:75874531-75874550 MS.gene006089:CDS 45.0%
CAACATACTGCAAAGGTGAC+AGG + chr1.4:75877115-75877134 MS.gene006089:CDS 45.0%
CAGCAGTTGTATTACGGTCA+AGG + chr1.4:75876170-75876189 MS.gene006089:CDS 45.0%
CAGGAAAGGGTTAGGACAAA+TGG + chr1.4:75874789-75874808 MS.gene006089:CDS 45.0%
CATGCCATCCAACTGTTTGA+TGG - chr1.4:75874724-75874743 None:intergenic 45.0%
CATTTGTCCTAACCCTTTCC+TGG - chr1.4:75874791-75874810 None:intergenic 45.0%
CCATATCAGCTCCAAAGACA+GGG + chr1.4:75876290-75876309 MS.gene006089:CDS 45.0%
CCCTGTACTTTCTTGTAAGG+TGG + chr1.4:75874626-75874645 MS.gene006089:CDS 45.0%
CGAATAGGTTTCCCATTCAG+AGG - chr1.4:75874486-75874505 None:intergenic 45.0%
CTCAACGTGATCCAAGTGTT+CGG + chr1.4:75874517-75874536 MS.gene006089:CDS 45.0%
CTCAACTTCACTCCTCTGAA+TGG + chr1.4:75874471-75874490 MS.gene006089:CDS 45.0%
CTCCAAAGACAGGGTCAAAA+TGG + chr1.4:75876299-75876318 MS.gene006089:CDS 45.0%
CTGTCACCTTTGCAGTATGT+TGG - chr1.4:75877117-75877136 None:intergenic 45.0%
CTTGATTCTGCTGCACATGT+TGG - chr1.4:75876358-75876377 None:intergenic 45.0%
GACATAAGCGTAACCAAGAG+AGG - chr1.4:75873425-75873444 None:intergenic 45.0%
GACCGTAATACAACTGCTGA+GGG - chr1.4:75876169-75876188 None:intergenic 45.0%
GATCCAAGTGTTCGGAAAAG+TGG + chr1.4:75874525-75874544 MS.gene006089:CDS 45.0%
GGATTCACATGGTCATAGCA+AGG + chr1.4:75875409-75875428 MS.gene006089:CDS 45.0%
TCCCGAGGAAGCAAATAAAG+CGG + chr1.4:75875457-75875476 MS.gene006089:CDS 45.0%
TGACCGTAATACAACTGCTG+AGG - chr1.4:75876170-75876189 None:intergenic 45.0%
TGAGCCACAGCAACAAACAA+AGG - chr1.4:75875599-75875618 None:intergenic 45.0%
TGCATCGTAACTCCAACCAA+GGG + chr1.4:75876462-75876481 MS.gene006089:CDS 45.0%
TGGCCCTGTACTTTCTTGTA+AGG + chr1.4:75874623-75874642 MS.gene006089:CDS 45.0%
TGGTGTAAGACAGTCCACAA+GGG - chr1.4:75877092-75877111 None:intergenic 45.0%
TGTCAACTTCACCAATGCTC+AGG + chr1.4:75873441-75873460 MS.gene006089:CDS 45.0%
TTGAAACAACCTGAGCGACT+TGG - chr1.4:75873372-75873391 None:intergenic 45.0%
TTGCATCGTAACTCCAACCA+AGG + chr1.4:75876461-75876480 MS.gene006089:CDS 45.0%
TTGGTGTAAGACAGTCCACA+AGG - chr1.4:75877093-75877112 None:intergenic 45.0%
TTTACGTTGGCGATCTCGAA+GGG + chr1.4:75873311-75873330 MS.gene006089:CDS 45.0%
! ATGGTCGGTTGACTGTGTTT+TGG + chr1.4:75876004-75876023 MS.gene006089:intron 45.0%
! CATGACACTTTTGCTGCGTT+TGG + chr1.4:75874603-75874622 MS.gene006089:CDS 45.0%
! CCGATGACATTTGATGGTTC+TGG + chr1.4:75876539-75876558 MS.gene006089:CDS 45.0%
! CCTATTGATAATCAGCGTCC+AGG + chr1.4:75876575-75876594 MS.gene006089:CDS 45.0%
! CCTGGACGCTGATTATCAAT+AGG - chr1.4:75876578-75876597 None:intergenic 45.0%
! GACAGGGATGTTGCTTGAAA+TGG + chr1.4:75877132-75877151 MS.gene006089:CDS 45.0%
! GCCACCTTACAAGAAAGTAC+AGG - chr1.4:75874630-75874649 None:intergenic 45.0%
! GTGAATGCGTCACTTTACGT+TGG + chr1.4:75873298-75873317 MS.gene006089:CDS 45.0%
! TTTTGTTCGCCACCAGGAAA+GGG + chr1.4:75874776-75874795 MS.gene006089:CDS 45.0%
! TTTTTGTTCGCCACCAGGAA+AGG + chr1.4:75874775-75874794 MS.gene006089:CDS 45.0%
!! ACCGCTTTATTTGCTTCCTC+GGG - chr1.4:75875461-75875480 None:intergenic 45.0%
!! ATACCATGCGCTGATTGTCT+GGG - chr1.4:75876637-75876656 None:intergenic 45.0%
!! GATCCACTTTTCCGAACACT+TGG - chr1.4:75874531-75874550 None:intergenic 45.0%
!! TCTGAAGTTGGTGATCAGCT+TGG + chr1.4:75877250-75877269 MS.gene006089:CDS 45.0%
!! TTTTTCAGCGGCCAATGCAA+AGG + chr1.4:75874443-75874462 MS.gene006089:intron 45.0%
!! TAAAATAAATACATAAAAAT+GGG - chr1.4:75874172-75874191 None:intergenic 5.0%
!! TTAAAATAAATACATAAAAA+TGG - chr1.4:75874173-75874192 None:intergenic 5.0%
!!! TTTTTATGTATTTATTTTAA+CGG + chr1.4:75874173-75874192 MS.gene006089:intron 5.0%
AAACCAAATCCAGCAGGCTG+AGG - chr1.4:75876215-75876234 None:intergenic 50.0%
AGCAGATCTTGCCTGGAATG+CGG + chr1.4:75876240-75876259 MS.gene006089:CDS 50.0%
ATCCCGATGCAGCTTCATGA+AGG - chr1.4:75877231-75877250 None:intergenic 50.0%
CATGGTCATAGCAAGGGTTC+TGG + chr1.4:75875416-75875435 MS.gene006089:CDS 50.0%
CGAAATGGCATGGATCTAGC+AGG + chr1.4:75876506-75876525 MS.gene006089:CDS 50.0%
CTTTACGTTGGCGATCTCGA+AGG + chr1.4:75873310-75873329 MS.gene006089:CDS 50.0%
GACAGGGTCAAAATGGGCAA+CGG + chr1.4:75876306-75876325 MS.gene006089:CDS 50.0%
GATGGTTCAGTCTCCGAATG+TGG + chr1.4:75873237-75873256 MS.gene006089:CDS 50.0%
GATTCTGCTGCACATGTTGG+AGG - chr1.4:75876355-75876374 None:intergenic 50.0%
GCCATATCAGCTCCAAAGAC+AGG + chr1.4:75876289-75876308 MS.gene006089:CDS 50.0%
GCCCCTCAGCAGTTGTATTA+CGG + chr1.4:75876164-75876183 MS.gene006089:CDS 50.0%
GGCCAACAATCGAAATGGCA+TGG + chr1.4:75876496-75876515 MS.gene006089:CDS 50.0%
GGTAGCAGAAGCTAAAGCAG+AGG - chr1.4:75876615-75876634 None:intergenic 50.0%
GGTCAAAATGGGCAACGGAT+AGG + chr1.4:75876311-75876330 MS.gene006089:CDS 50.0%
GGTCCTTCATGAAGCTGCAT+CGG + chr1.4:75877225-75877244 MS.gene006089:CDS 50.0%
GGTGTAAGACAGTCCACAAG+GGG - chr1.4:75877091-75877110 None:intergenic 50.0%
GTCCTTCATGAAGCTGCATC+GGG + chr1.4:75877226-75877245 MS.gene006089:CDS 50.0%
GTTGAAAGCCAAGTTCGAGC+AGG + chr1.4:75875082-75875101 MS.gene006089:CDS 50.0%
TATTACGGTCAAGGCACACC+TGG + chr1.4:75876179-75876198 MS.gene006089:CDS 50.0%
TCAGCGCAAAGAAGAGAGGA+AGG + chr1.4:75875616-75875635 MS.gene006089:CDS 50.0%
TCTGTTTAGCCAAGTCGCTC+AGG + chr1.4:75873360-75873379 MS.gene006089:CDS 50.0%
TGCTGGAAACCAAATCCAGC+AGG - chr1.4:75876221-75876240 None:intergenic 50.0%
TGCTTCCTCGGGAGTAGAAA+AGG - chr1.4:75875450-75875469 None:intergenic 50.0%
TTGTCCTAACCCTTTCCTGG+TGG - chr1.4:75874788-75874807 None:intergenic 50.0%
TTTGCTCAAATCCGTTCCCC+TGG + chr1.4:75876083-75876102 MS.gene006089:CDS 50.0%
!! CATACCATGCGCTGATTGTC+TGG - chr1.4:75876638-75876657 None:intergenic 50.0%
!! CCCTGTCTTTGGAGCTGATA+TGG - chr1.4:75876293-75876312 None:intergenic 50.0%
!! GCCCATTTTGACCCTGTCTT+TGG - chr1.4:75876304-75876323 None:intergenic 50.0%
!! TACCATGCGCTGATTGTCTG+GGG - chr1.4:75876636-75876655 None:intergenic 50.0%
!! TAGCAAGGGTTCTGGTTTCG+TGG + chr1.4:75875424-75875443 MS.gene006089:CDS 50.0%
!!! TGGGTTTTTTGTTCGCCACC+AGG + chr1.4:75874770-75874789 MS.gene006089:CDS 50.0%
AACTGCTGAGGGGCAAGTCT+TGG - chr1.4:75876158-75876177 None:intergenic 55.0%
AATCCGTTCCCCTGGTGGAA+TGG + chr1.4:75876091-75876110 MS.gene006089:CDS 55.0%
ACTGCAGCAGCAGCTGAATC+TGG - chr1.4:75874978-75874997 None:intergenic 55.0%
AGAGAGGAAGGCTCAGTTGC+AGG + chr1.4:75875628-75875647 MS.gene006089:CDS 55.0%
CAGACTAGGCGATCCTCTCT+TGG + chr1.4:75873409-75873428 MS.gene006089:CDS 55.0%
CGGATAGGTGCTCGACGAAA+TGG + chr1.4:75876326-75876345 MS.gene006089:CDS 55.0%
GAGGCAAGTGATGTAGACCC+TGG - chr1.4:75876596-75876615 None:intergenic 55.0%
GGCTGCGATTTCATCACCGA+TGG + chr1.4:75873219-75873238 MS.gene006089:CDS 55.0%
GGGTCTGTAGGGATCAGACT+AGG + chr1.4:75873395-75873414 MS.gene006089:CDS 55.0%
GGTTCAGTCTCCGAATGTGG+TGG + chr1.4:75873240-75873259 MS.gene006089:CDS 55.0%
TACCCCAGACAATCAGCGCA+TGG + chr1.4:75876631-75876650 MS.gene006089:CDS 55.0%
TATTTGTGGGGAGGGCTCAG+AGG + chr1.4:75875039-75875058 MS.gene006089:CDS 55.0%
TGGCTCAGCGCAAAGAAGAG+AGG + chr1.4:75875612-75875631 MS.gene006089:CDS 55.0%
TTCATACCACCTCAGCCTGC+TGG + chr1.4:75876203-75876222 MS.gene006089:CDS 55.0%
TTCCAGCAGCAGATCTTGCC+TGG + chr1.4:75876233-75876252 MS.gene006089:CDS 55.0%
TTCCAGGCAAGATCTGCTGC+TGG - chr1.4:75876238-75876257 None:intergenic 55.0%
TTCGCCACCAGGAAAGGGTT+AGG + chr1.4:75874781-75874800 MS.gene006089:CDS 55.0%
! CTCGAAGGGAGTGTGAACGA+AGG + chr1.4:75873325-75873344 MS.gene006089:CDS 55.0%
! GCTGCATCGGGATCTGAAGT+TGG + chr1.4:75877238-75877257 MS.gene006089:CDS 55.0%
ATCTTGCCTGGAATGCGGCC+TGG + chr1.4:75876245-75876264 MS.gene006089:CDS 60.0%
CCAAATCCAGCAGGCTGAGG+TGG - chr1.4:75876212-75876231 None:intergenic 60.0%
CCACCTCAGCCTGCTGGATT+TGG + chr1.4:75876209-75876228 MS.gene006089:CDS 60.0%
CGCATTCACGAACGGTCCTC+CGG - chr1.4:75873287-75873306 None:intergenic 60.0%
GCTCAAATCCGTTCCCCTGG+TGG + chr1.4:75876086-75876105 MS.gene006089:CDS 60.0%
GCTTCCTGGGTACCATCCAG+GGG + chr1.4:75876130-75876149 MS.gene006089:CDS 60.0%
GGCTGAGGTGGTATGAAGCC+AGG - chr1.4:75876200-75876219 None:intergenic 60.0%
GGCTTCCTGGGTACCATCCA+GGG + chr1.4:75876129-75876148 MS.gene006089:CDS 60.0%
GTCTCCGAATGTGGTGGCTC+CGG + chr1.4:75873246-75873265 MS.gene006089:CDS 60.0%
! CGTGGCCTTTTCTACTCCCG+AGG + chr1.4:75875442-75875461 MS.gene006089:CDS 60.0%
! GTGCCATTCCACCAGGGGAA+CGG - chr1.4:75876097-75876116 None:intergenic 60.0%
!! CAAGTCTTGGTGCCCCTGGA+TGG - chr1.4:75876145-75876164 None:intergenic 60.0%
GAATGTGGTGGCTCCGGCGA+CGG + chr1.4:75873252-75873271 MS.gene006089:CDS 65.0%
GCAACACCAGGCCGCATTCC+AGG - chr1.4:75876254-75876273 None:intergenic 65.0%
GGGCTTCCTGGGTACCATCC+AGG + chr1.4:75876128-75876147 MS.gene006089:CDS 65.0%
GTCGCCGGAGCCACCACATT+CGG - chr1.4:75873253-75873272 None:intergenic 65.0%
! GAATGGCACCGCTGGCTGCA+GGG + chr1.4:75876108-75876127 MS.gene006089:CDS 65.0%
!! CAGCGGTGCCATTCCACCAG+GGG - chr1.4:75876102-75876121 None:intergenic 65.0%
!! CCAGCGGTGCCATTCCACCA+GGG - chr1.4:75876103-75876122 None:intergenic 65.0%
CCAGGAAGCCCTGCAGCCAG+CGG - chr1.4:75876119-75876138 None:intergenic 70.0%
CCCTGGTGGAATGGCACCGC+TGG + chr1.4:75876100-75876119 MS.gene006089:CDS 70.0%
CCGGTCAATGCTGCCGTCGC+CGG - chr1.4:75873268-75873287 None:intergenic 70.0%
GGTGCCCCTGGATGGTACCC+AGG - chr1.4:75876137-75876156 None:intergenic 70.0%
! CGCTGGCTGCAGGGCTTCCT+GGG + chr1.4:75876117-75876136 MS.gene006089:CDS 70.0%
! GGAATGGCACCGCTGGCTGC+AGG + chr1.4:75876107-75876126 MS.gene006089:CDS 70.0%
!! CCGGCGACGGCAGCATTGAC+CGG + chr1.4:75873265-75873284 MS.gene006089:CDS 70.0%
!! GCCAGCGGTGCCATTCCACC+AGG - chr1.4:75876104-75876123 None:intergenic 70.0%
!! GCGACGGCAGCATTGACCGG+AGG + chr1.4:75873268-75873287 MS.gene006089:CDS 70.0%
!! GGGGCAAGTCTTGGTGCCCC+TGG - chr1.4:75876149-75876168 None:intergenic 70.0%
! CCGCTGGCTGCAGGGCTTCC+TGG + chr1.4:75876116-75876135 MS.gene006089:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 75873217 75877294 75873217 ID=MS.gene006089
chr1.4 mRNA 75873217 75877294 75873217 ID=MS.gene006089.t1;Parent=MS.gene006089
chr1.4 exon 75873217 75873466 75873217 ID=MS.gene006089.t1.exon1;Parent=MS.gene006089.t1
chr1.4 CDS 75873217 75873466 75873217 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75874451 75875229 75874451 ID=MS.gene006089.t1.exon2;Parent=MS.gene006089.t1
chr1.4 CDS 75874451 75875229 75874451 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75875401 75875478 75875401 ID=MS.gene006089.t1.exon3;Parent=MS.gene006089.t1
chr1.4 CDS 75875401 75875478 75875401 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75875560 75875649 75875560 ID=MS.gene006089.t1.exon4;Parent=MS.gene006089.t1
chr1.4 CDS 75875560 75875649 75875560 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75876077 75876376 75876077 ID=MS.gene006089.t1.exon5;Parent=MS.gene006089.t1
chr1.4 CDS 75876077 75876376 75876077 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75876458 75876652 75876458 ID=MS.gene006089.t1.exon6;Parent=MS.gene006089.t1
chr1.4 CDS 75876458 75876652 75876458 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
chr1.4 exon 75877067 75877294 75877067 ID=MS.gene006089.t1.exon7;Parent=MS.gene006089.t1
chr1.4 CDS 75877067 75877294 75877067 ID=cds.MS.gene006089.t1;Parent=MS.gene006089.t1
Gene Sequence

>MS.gene006089

ATGGCTGCGATTTCATCACCGATGGTTCAGTCTCCGAATGTGGTGGCTCCGGCGACGGCAGCATTGACCGGAGGACCGTTCGTGAATGCGTCACTTTACGTTGGCGATCTCGAAGGGAGTGTGAACGAAGGACAACTTTTTGATCTGTTTAGCCAAGTCGCTCAGGTTGTTTCAATTAGGGTCTGTAGGGATCAGACTAGGCGATCCTCTCTTGGTTACGCTTATGTCAACTTCACCAATGCTCAGGATGGTGAGTTTTTATTTTTCGAAATTAATTTGTTTGATCTTTTATTTGATACTGATATTTGTTAACTGTTTCTTGTTAATTTGGTTTTTGCATGTCGATTTCGTCGTAATTAATCATCTATGTGTTGTAATTTGGTTTTTGCATGTCGATTTCATCGTAATTAATCATCTACGTGTTGTTATCATCGTAATTATCATCAATTTCATTTATGAAGCATAAACACGACACAAATACTAATACATCCACACCGATAATTTGAGAAAGGAACATAAGTCATTGTGATCATGTGTCATGTTGGACACTAACATGTATCGGACAGACACCGGACATAACATCGACACAAATACATAACACCATAAAATTTTAAGAAAATGATATAAATCAATGTAATCACAAGTGTCAGTATCGGATACTACACATGTCAGACACTGGGACACGTCTTCAATAAGAAGTGTCGGTGCAATTGATAACATTGAACATGCCTTCGATGCTACAAAGATTCTTGTACATTGTACAAAGCTAAGTGTTGGGTAGTTGTTGATGTTTTGTTTTACCTATATAGAATGACTTATTAGATGTATTCCGAGATTCATTATTCATATCATAACTTATGTATGTTGAATGTGAAATCCAGATGAACAATTGTAAGGATGAAGGTTGATGTTGTCCTTGTTTATAGTTGTATCTATTAATTAATTATACCAACCCATTTTTATGTATTTATTTTAACGGCATATTAATGTTGGGGGTATTAGGTTGGTCATTGTATTAATTTGTATTATTTGACGGCTTTGTCACATTGAAGAAACCACAAAATCTGTGCACAAATTTCTTCTTCTGAACTGTGATGTACTGTTTATTCTCATTTTACATCCATAATAATTAATATATGGATGGACTGTTGTTATCATAGGTTTTGGTAGTTATTAAAAATATCTTATGGTTGATATGCATTGTTGATCCTATTTTTGTTTCTTGATTTTTCAGCGGCCAATGCAAAGGAACTTCTCAACTTCACTCCTCTGAATGGGAAACCTATTCGTATCATGTTTTCTCAACGTGATCCAAGTGTTCGGAAAAGTGGATCGGGCAATGTGTTCATTAAGAACCTGGACACATCAATTGATCACAAGGCGTTGCATGACACTTTTGCTGCGTTTGGCCCTGTACTTTCTTGTAAGGTGGCTCTTGACAGTAATGGTCAGTCAAAAGGGTATGGCTTTGTTCAGTTTGACAATGAAGAAGCTGCAAAGAGTGCCATCAAACAGTTGGATGGCATGTTGATAAATGATAAACAAGTCTATGTTGGGTTTTTTGTTCGCCACCAGGAAAGGGTTAGGACAAATGGATCGCCCAAGTTCACTAATGTGTATGTGAAAAATCTTTCTGAAGCATCAACTGATGAGGACTTGAAACAACTTTTTGGCCCCTTTGGCAAGATAACTAGTGCAACAGTCATGAAAGATGCAAATGGGAAATCTAGATGCTTTGGTTTTGTGAATTTTCAAAGTCCAGATTCAGCTGCTGCTGCAGTTGAGAAGTTAAATGGAACTGCTATCAATGATGACAAGGTTTTATTTGTGGGGAGGGCTCAGAGGAAAGCAGAAAGAGAGCATGAGTTGAAAGCCAAGTTCGAGCAGGAAAGAATTAACAGATATGAGAAATTGCAAGGGGCTAATTTGTACCTGAAAAATCTTGATGACGATTTTAATGAAGAAAAGTTGAAAGATCTATTTTCTGAGTTTGGAACTGTAACATCTTGCAGGGTATGTTAAAGATTATTTTTATTGACCGTCTCTCTGCATATATTTATTTGTTTGTGAACATGCGCAACTATGTCCTTTTTTGTGTGCATTATATACTTCCAACATACCTTTTTTACTGGTCAATTTTATTGATATTATTTTAATCAATGAAATTATATGTTGCATTATTAGGTGATGTTGGATTCACATGGTCATAGCAAGGGTTCTGGTTTCGTGGCCTTTTCTACTCCCGAGGAAGCAAATAAAGCGGTAAGTATTCAAAGAAGCGTGGCTGAGCTACATGTTTATTTTCATAATCGATTCTTAAGCTTTCTATTGTTGTTTGTCCAGTTGAATGAAATGAATGGAAAGTTGGTGGGAAGAAAGCCTTTGTTTGTTGCTGTGGCTCAGCGCAAAGAAGAGAGGAAGGCTCAGTTGCAGGTGATGCTCTTCTTTAACATCATTATGCACATATGATTTCAATACTTACTTCATTATTAAGTAGCTGACTGGCTATAGCTTATAATTAGTGGATTTGCTTTGACTGCCTTTGTTGAAATATTCATTTTTGCTTTGTAATATATAACACTTCTTCATTTTTGCTTTGTTGAAATATTCATTTTTGCTTATAATTGGTATGTTGTATGACTTGTATCTAGTTTTTTTAAATGCTCATCTTTTTTGTGTACAATTTATTTGAGTTCTGCTATTTGACATTCCTTTATGAATCCTCATGGTTGATGTTTTAGACATAACCCGTTTCCCTTTAAACATTTATTTACTTTCACAGTTCTCATGGTCGGTTGACTGTGTTTTGGAGTTTATTCATAAAATCAATGGGTGGCTTAACAAGTTATTTTCTCTGTAGGCACATTTTGCTCAAATCCGTTCCCCTGGTGGAATGGCACCGCTGGCTGCAGGGCTTCCTGGGTACCATCCAGGGGCACCAAGACTTGCCCCTCAGCAGTTGTATTACGGTCAAGGCACACCTGGCTTCATACCACCTCAGCCTGCTGGATTTGGTTTCCAGCAGCAGATCTTGCCTGGAATGCGGCCTGGTGTTGCTCCGAATTTTGTTATGCCATATCAGCTCCAAAGACAGGGTCAAAATGGGCAACGGATAGGTGCTCGACGAAATGGAAACCTCCAACATGTGCAGCAGAATCAAGTAATTATTACTTAAATTTAAATTTTGAGCTTTTTATAATGACTTGTTTTATCGCATTAAAAACATATATATTGAAAGCAGATGTTGCATCGTAACTCCAACCAAGGGTATAGATATATGGCCAACAATCGAAATGGCATGGATCTAGCAGGTCCAATGTTGCCGATGACATTTGATGGTTCTGGAGTTTCTGCTGCTCCTATTGATAATCAGCGTCCAGGGTCTACATCACTTGCCTCTGCTTTAGCTTCTGCTACCCCAGACAATCAGCGCATGGTATGTATAAGTTGCATTTGGTATTTTTACATGTAGGAACTGTAGATTGTTTCCTTAGAGTAAATTGGTATTCTGATCTCTGAAAATTTACTTGCCTCACAATTTTAACCCTTTAATTAAATTATTCAAACACTTCATGTTACTCCTTTTGCCATTTATGGTAGGGTCTAGCATAATATTTGTTTAGTAATTTAAATGATAAAATCATATGCATAATTTAAACACGGATCAAATTGAGGTACATTACTAACTAAGGACTAAAATTACATTATACTTGTTTTCTATTTTTTCTTGGAAGCTATATCAATAACATATGTAGATAATTTAATTTGTAGTTACCTTTGTATCAGTTAATTTATAAAACTCATGTGTGAGAAATGTAATTTTTCGGTATGTACCAATTGAAATTATCAGATGCTCGGTGAACATCTATATCCCCTTGTGGACTGTCTTACACCAAACCAACATACTGCAAAGGTGACAGGGATGTTGCTTGAAATGGACCAATCCGAAGTGATTCATCTTATTGAATCTCCCGATGCCCTAAAAATAAAGGTCTCTGAGGCATTGCAGGTCCTTCATGAAGCTGCATCGGGATCTGAAGTTGGTGATCAGCTTGGTTCATTGTCATTGAACGAATGA
Protein sequence

>MS.gene006089.t1

MAAISSPMVQSPNVVAPATAALTGGPFVNASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFTNAQDAANAKELLNFTPLNGKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAFGPVLSCKVALDSNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQVYVGFFVRHQERVRTNGSPKFTNVYVKNLSEASTDEDLKQLFGPFGKITSATVMKDANGKSRCFGFVNFQSPDSAAAAVEKLNGTAINDDKVLFVGRAQRKAEREHELKAKFEQERINRYEKLQGANLYLKNLDDDFNEEKLKDLFSEFGTVTSCRVMLDSHGHSKGSGFVAFSTPEEANKALNEMNGKLVGRKPLFVAVAQRKEERKAQLQAHFAQIRSPGGMAPLAAGLPGYHPGAPRLAPQQLYYGQGTPGFIPPQPAGFGFQQQILPGMRPGVAPNFVMPYQLQRQGQNGQRIGARRNGNLQHVQQNQMLHRNSNQGYRYMANNRNGMDLAGPMLPMTFDGSGVSAAPIDNQRPGSTSLASALASATPDNQRMMLGEHLYPLVDCLTPNQHTAKVTGMLLEMDQSEVIHLIESPDALKIKVSEALQVLHEAASGSEVGDQLGSLSLNE