Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85823.t1 | RHN51185.1 | 83.9 | 516 | 65 | 4 | 99 | 598 | 1 | 514 | 4.70E-235 | 823.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85823.t1 | Q05196 | 50.3 | 608 | 258 | 11 | 24 | 591 | 58 | 661 | 1.5e-157 | 557.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85823.t1 | A0A396HIX0 | 83.9 | 516 | 65 | 4 | 99 | 598 | 1 | 514 | 3.4e-235 | 823.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85823.t1 | MTR_6g040190 | 66.827 | 624 | 169 | 6 | 2 | 598 | 3 | 615 | 0.0 | 813 |
MS.gene85823.t1 | MTR_1g097440 | 62.658 | 632 | 200 | 5 | 1 | 596 | 1 | 632 | 0.0 | 805 |
MS.gene85823.t1 | MTR_6g040070 | 89.756 | 410 | 40 | 1 | 99 | 508 | 1 | 408 | 0.0 | 750 |
MS.gene85823.t1 | MTR_6g040070 | 35.764 | 288 | 166 | 5 | 25 | 295 | 15 | 300 | 1.07e-40 | 158 |
MS.gene85823.t1 | MTR_4g085540 | 52.709 | 609 | 245 | 10 | 22 | 594 | 31 | 632 | 0.0 | 603 |
MS.gene85823.t1 | MTR_3g102040 | 52.292 | 589 | 258 | 11 | 21 | 594 | 20 | 600 | 0.0 | 553 |
MS.gene85823.t1 | MTR_1g019150 | 59.519 | 457 | 174 | 8 | 11 | 460 | 14 | 466 | 0.0 | 537 |
MS.gene85823.t1 | MTR_1g019150 | 65.000 | 60 | 20 | 1 | 535 | 594 | 570 | 628 | 1.90e-14 | 77.0 |
MS.gene85823.t1 | MTR_7g102730 | 41.584 | 606 | 305 | 12 | 25 | 591 | 10 | 605 | 5.71e-131 | 397 |
MS.gene85823.t1 | MTR_1g061870 | 47.959 | 392 | 190 | 4 | 3 | 393 | 1 | 379 | 4.35e-112 | 345 |
MS.gene85823.t1 | MTR_1g061870 | 37.413 | 286 | 160 | 5 | 113 | 396 | 15 | 283 | 4.37e-47 | 173 |
MS.gene85823.t1 | MTR_1723s0010 | 91.026 | 78 | 7 | 0 | 1 | 78 | 1 | 78 | 4.07e-42 | 146 |
MS.gene85823.t1 | MTR_3g065190 | 36.612 | 183 | 112 | 4 | 21 | 200 | 21 | 202 | 1.72e-32 | 129 |
MS.gene85823.t1 | MTR_3g065190 | 28.745 | 247 | 149 | 8 | 205 | 445 | 27 | 252 | 1.53e-16 | 82.0 |
MS.gene85823.t1 | MTR_6g040200 | 85.455 | 55 | 8 | 0 | 454 | 508 | 1 | 55 | 3.04e-28 | 108 |
MS.gene85823.t1 | MTR_0989s0020 | 54.783 | 115 | 10 | 1 | 480 | 594 | 1 | 73 | 8.21e-28 | 107 |
MS.gene85823.t1 | MTR_1889s0010 | 78.462 | 65 | 14 | 0 | 16 | 80 | 11 | 75 | 1.54e-27 | 106 |
MS.gene85823.t1 | MTR_1g020080 | 28.571 | 266 | 161 | 8 | 23 | 266 | 95 | 353 | 4.82e-24 | 105 |
MS.gene85823.t1 | MTR_1g020080 | 24.735 | 283 | 202 | 6 | 115 | 392 | 99 | 375 | 4.96e-22 | 99.4 |
MS.gene85823.t1 | MTR_1g020080 | 26.738 | 187 | 115 | 5 | 18 | 187 | 183 | 364 | 4.86e-13 | 71.6 |
MS.gene85823.t1 | MTR_3g101370 | 28.431 | 306 | 189 | 11 | 11 | 293 | 80 | 378 | 1.30e-23 | 103 |
MS.gene85823.t1 | MTR_3g101370 | 24.211 | 285 | 200 | 8 | 115 | 391 | 95 | 371 | 7.86e-20 | 92.8 |
MS.gene85823.t1 | MTR_0913s0010 | 73.016 | 63 | 17 | 0 | 536 | 598 | 1 | 63 | 1.19e-22 | 92.0 |
MS.gene85823.t1 | MTR_8g022050 | 27.208 | 283 | 163 | 8 | 26 | 274 | 63 | 336 | 3.41e-21 | 97.1 |
MS.gene85823.t1 | MTR_8g022050 | 27.097 | 310 | 167 | 11 | 104 | 376 | 57 | 344 | 6.76e-18 | 87.0 |
MS.gene85823.t1 | MTR_8g022050 | 27.429 | 175 | 107 | 5 | 204 | 377 | 63 | 218 | 1.40e-11 | 67.4 |
MS.gene85823.t1 | MTR_4g131970 | 27.444 | 266 | 166 | 8 | 23 | 266 | 72 | 332 | 5.79e-21 | 95.9 |
MS.gene85823.t1 | MTR_4g131970 | 23.881 | 268 | 187 | 9 | 115 | 373 | 76 | 335 | 7.90e-17 | 83.6 |
MS.gene85823.t1 | MTR_2g022950 | 26.792 | 265 | 164 | 9 | 26 | 266 | 61 | 319 | 6.31e-21 | 95.9 |
MS.gene85823.t1 | MTR_2g022950 | 23.792 | 269 | 187 | 10 | 115 | 373 | 62 | 322 | 2.03e-15 | 79.0 |
MS.gene85823.t1 | MTR_4g124940 | 26.199 | 271 | 161 | 6 | 26 | 264 | 47 | 310 | 7.21e-20 | 92.8 |
MS.gene85823.t1 | MTR_4g124940 | 26.384 | 307 | 181 | 9 | 98 | 377 | 31 | 319 | 8.68e-19 | 89.4 |
MS.gene85823.t1 | MTR_4g124940 | 26.471 | 238 | 149 | 8 | 204 | 436 | 47 | 263 | 1.56e-14 | 76.3 |
MS.gene85823.t1 | MTR_3g109090 | 24.542 | 273 | 166 | 5 | 26 | 265 | 45 | 310 | 8.43e-19 | 89.7 |
MS.gene85823.t1 | MTR_3g109090 | 25.914 | 301 | 177 | 8 | 105 | 377 | 36 | 318 | 2.45e-17 | 85.1 |
MS.gene85823.t1 | MTR_3g109090 | 24.542 | 273 | 166 | 5 | 26 | 265 | 61 | 326 | 9.71e-19 | 89.7 |
MS.gene85823.t1 | MTR_3g109090 | 25.914 | 301 | 177 | 8 | 105 | 377 | 52 | 334 | 3.13e-17 | 84.7 |
MS.gene85823.t1 | MTR_4g052940 | 28.279 | 244 | 158 | 6 | 25 | 261 | 110 | 343 | 2.38e-18 | 89.0 |
MS.gene85823.t1 | MTR_4g052940 | 27.984 | 243 | 160 | 5 | 25 | 261 | 110 | 343 | 4.17e-18 | 86.7 |
MS.gene85823.t1 | MTR_3g075500 | 33.333 | 198 | 111 | 7 | 200 | 391 | 106 | 288 | 9.10e-18 | 84.7 |
MS.gene85823.t1 | MTR_3g075500 | 28.191 | 188 | 113 | 4 | 23 | 194 | 107 | 288 | 4.97e-15 | 76.3 |
MS.gene85823.t1 | MTR_3g075500 | 29.834 | 181 | 118 | 5 | 113 | 285 | 109 | 288 | 5.90e-11 | 64.3 |
MS.gene85823.t1 | MTR_1g056520 | 29.412 | 170 | 106 | 4 | 27 | 183 | 110 | 278 | 1.72e-17 | 84.0 |
MS.gene85823.t1 | MTR_2g097960 | 23.239 | 284 | 172 | 7 | 23 | 265 | 13 | 291 | 8.31e-17 | 83.6 |
MS.gene85823.t1 | MTR_7g118120 | 25.275 | 273 | 183 | 6 | 25 | 288 | 104 | 364 | 2.33e-16 | 82.4 |
MS.gene85823.t1 | MTR_3g075500 | 33.146 | 178 | 101 | 6 | 200 | 371 | 106 | 271 | 2.42e-16 | 80.1 |
MS.gene85823.t1 | MTR_3g075500 | 29.240 | 171 | 99 | 4 | 23 | 177 | 107 | 271 | 4.47e-14 | 73.2 |
MS.gene85823.t1 | MTR_4g086600 | 24.407 | 295 | 177 | 7 | 26 | 279 | 117 | 406 | 4.31e-16 | 81.6 |
MS.gene85823.t1 | MTR_4g086600 | 27.957 | 186 | 122 | 6 | 205 | 386 | 118 | 295 | 2.59e-11 | 66.6 |
MS.gene85823.t1 | MTR_4g104470 | 30.645 | 186 | 116 | 5 | 205 | 388 | 124 | 298 | 1.61e-15 | 78.2 |
MS.gene85823.t1 | MTR_4g104470 | 28.177 | 181 | 121 | 3 | 23 | 195 | 120 | 299 | 5.17e-13 | 70.5 |
MS.gene85823.t1 | MTR_7g010360 | 25.795 | 283 | 194 | 6 | 25 | 301 | 350 | 622 | 2.80e-15 | 79.7 |
MS.gene85823.t1 | MTR_3g027140 | 29.208 | 202 | 134 | 5 | 177 | 375 | 34 | 229 | 4.09e-15 | 75.5 |
MS.gene85823.t1 | MTR_3g027140 | 28.019 | 207 | 121 | 5 | 7 | 185 | 26 | 232 | 4.28e-15 | 75.5 |
MS.gene85823.t1 | MTR_1g045510 | 30.303 | 165 | 109 | 3 | 27 | 186 | 115 | 278 | 4.59e-15 | 76.3 |
MS.gene85823.t1 | MTR_1g020080 | 25.698 | 179 | 122 | 5 | 23 | 192 | 95 | 271 | 1.93e-14 | 75.1 |
MS.gene85823.t1 | MTR_7g106440 | 25.424 | 177 | 108 | 4 | 27 | 183 | 111 | 283 | 2.15e-14 | 75.1 |
MS.gene85823.t1 | MTR_2g022950 | 26.012 | 173 | 119 | 5 | 23 | 186 | 58 | 230 | 1.66e-13 | 71.6 |
MS.gene85823.t1 | MTR_3g101370 | 26.829 | 205 | 133 | 8 | 11 | 200 | 80 | 282 | 2.48e-13 | 71.6 |
MS.gene85823.t1 | MTR_2g022950 | 26.012 | 173 | 119 | 5 | 23 | 186 | 58 | 230 | 6.66e-13 | 70.1 |
MS.gene85823.t1 | MTR_1g064230 | 29.744 | 195 | 113 | 5 | 115 | 286 | 86 | 279 | 1.29e-12 | 68.9 |
MS.gene85823.t1 | MTR_4g122650 | 25.907 | 193 | 125 | 5 | 202 | 390 | 87 | 265 | 1.52e-12 | 70.9 |
MS.gene85823.t1 | MTR_7g099940 | 41.860 | 86 | 49 | 1 | 304 | 388 | 32 | 117 | 5.49e-12 | 63.9 |
MS.gene85823.t1 | MTR_7g094660 | 28.922 | 204 | 126 | 7 | 204 | 398 | 642 | 835 | 8.16e-12 | 68.9 |
MS.gene85823.t1 | MTR_5g030020 | 32.065 | 184 | 114 | 5 | 204 | 385 | 97 | 271 | 8.55e-12 | 67.0 |
MS.gene85823.t1 | MTR_7g109810 | 27.670 | 206 | 136 | 6 | 205 | 404 | 76 | 274 | 1.12e-11 | 67.4 |
MS.gene85823.t1 | MTR_7g107580 | 26.154 | 260 | 154 | 10 | 192 | 447 | 5 | 230 | 3.47e-11 | 65.5 |
MS.gene85823.t1 | MTR_8g076100 | 24.125 | 257 | 172 | 7 | 27 | 271 | 420 | 665 | 3.59e-11 | 66.6 |
MS.gene85823.t1 | MTR_8g076100 | 24.125 | 257 | 172 | 7 | 27 | 271 | 420 | 665 | 3.75e-11 | 66.6 |
MS.gene85823.t1 | MTR_8g076100 | 24.125 | 257 | 172 | 7 | 27 | 271 | 420 | 665 | 4.85e-11 | 66.2 |
MS.gene85823.t1 | MTR_7g109810 | 27.670 | 206 | 136 | 6 | 205 | 404 | 76 | 274 | 7.12e-11 | 65.5 |
MS.gene85823.t1 | MTR_7g013740 | 36.145 | 83 | 52 | 1 | 304 | 385 | 37 | 119 | 8.38e-11 | 60.8 |
MS.gene85823.t1 | MTR_4g081520 | 42.424 | 66 | 37 | 1 | 308 | 372 | 52 | 117 | 9.30e-11 | 60.8 |
MS.gene85823.t1 | MTR_7g107580 | 26.154 | 260 | 154 | 10 | 192 | 447 | 5 | 230 | 9.49e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85823.t1 | AT1G22760 | 52.288 | 612 | 248 | 11 | 24 | 599 | 48 | 651 | 0.0 | 602 |
MS.gene85823.t1 | AT1G71770 | 51.565 | 607 | 252 | 11 | 24 | 591 | 58 | 661 | 0.0 | 593 |
MS.gene85823.t1 | AT1G71770 | 51.565 | 607 | 252 | 11 | 24 | 591 | 58 | 661 | 0.0 | 593 |
MS.gene85823.t1 | AT4G34110 | 51.053 | 617 | 268 | 10 | 2 | 598 | 17 | 619 | 0.0 | 592 |
MS.gene85823.t1 | AT2G23350 | 48.235 | 595 | 275 | 10 | 26 | 594 | 47 | 634 | 1.50e-178 | 521 |
MS.gene85823.t1 | AT1G49760 | 57.399 | 446 | 177 | 7 | 26 | 465 | 46 | 484 | 1.02e-175 | 514 |
MS.gene85823.t1 | AT1G49760 | 63.333 | 60 | 21 | 1 | 535 | 594 | 591 | 649 | 8.08e-15 | 78.2 |
MS.gene85823.t1 | AT1G49760 | 57.399 | 446 | 177 | 7 | 26 | 465 | 46 | 484 | 1.02e-175 | 514 |
MS.gene85823.t1 | AT1G49760 | 63.333 | 60 | 21 | 1 | 535 | 594 | 591 | 649 | 8.08e-15 | 78.2 |
MS.gene85823.t1 | AT2G36660 | 40.102 | 591 | 298 | 17 | 25 | 591 | 24 | 582 | 6.79e-119 | 366 |
MS.gene85823.t1 | AT2G36660 | 32.997 | 297 | 177 | 5 | 12 | 293 | 104 | 393 | 4.56e-37 | 146 |
MS.gene85823.t1 | AT2G36660 | 31.937 | 191 | 110 | 4 | 200 | 388 | 21 | 193 | 6.53e-19 | 91.3 |
MS.gene85823.t1 | AT1G34140 | 56.962 | 316 | 132 | 3 | 83 | 397 | 1 | 313 | 1.64e-112 | 342 |
MS.gene85823.t1 | AT1G34140 | 31.987 | 297 | 180 | 5 | 12 | 293 | 23 | 312 | 3.48e-37 | 143 |
MS.gene85823.t1 | AT3G16380 | 46.073 | 382 | 197 | 6 | 19 | 396 | 17 | 393 | 3.89e-101 | 317 |
MS.gene85823.t1 | AT3G16380 | 34.495 | 287 | 173 | 4 | 112 | 397 | 20 | 292 | 1.56e-40 | 155 |
MS.gene85823.t1 | AT2G18510 | 37.158 | 183 | 111 | 4 | 21 | 200 | 21 | 202 | 4.57e-33 | 130 |
MS.gene85823.t1 | AT2G18510 | 28.509 | 228 | 135 | 8 | 205 | 425 | 27 | 233 | 5.15e-15 | 77.4 |
MS.gene85823.t1 | AT1G54080 | 28.571 | 273 | 152 | 7 | 26 | 264 | 64 | 327 | 6.36e-25 | 108 |
MS.gene85823.t1 | AT1G54080 | 28.028 | 289 | 157 | 11 | 104 | 364 | 58 | 323 | 7.11e-17 | 83.6 |
MS.gene85823.t1 | AT1G54080 | 27.429 | 175 | 107 | 5 | 204 | 377 | 64 | 219 | 8.12e-12 | 68.2 |
MS.gene85823.t1 | AT1G54080 | 28.520 | 277 | 151 | 8 | 26 | 264 | 64 | 331 | 1.68e-23 | 103 |
MS.gene85823.t1 | AT1G54080 | 27.304 | 293 | 158 | 11 | 104 | 364 | 58 | 327 | 1.36e-15 | 79.7 |
MS.gene85823.t1 | AT1G47500 | 30.000 | 270 | 157 | 9 | 23 | 266 | 101 | 364 | 2.65e-23 | 103 |
MS.gene85823.t1 | AT1G47500 | 25.000 | 340 | 209 | 9 | 115 | 429 | 105 | 423 | 3.44e-22 | 100 |
MS.gene85823.t1 | AT1G47490 | 25.767 | 326 | 224 | 10 | 115 | 429 | 103 | 421 | 7.06e-23 | 102 |
MS.gene85823.t1 | AT1G47490 | 29.368 | 269 | 160 | 10 | 23 | 266 | 99 | 362 | 7.32e-21 | 95.9 |
MS.gene85823.t1 | AT3G14100 | 28.102 | 274 | 152 | 7 | 26 | 264 | 60 | 323 | 8.01e-23 | 102 |
MS.gene85823.t1 | AT3G14100 | 27.778 | 270 | 166 | 7 | 114 | 364 | 60 | 319 | 4.37e-17 | 84.3 |
MS.gene85823.t1 | AT3G14100 | 28.902 | 173 | 103 | 5 | 204 | 375 | 60 | 213 | 3.97e-13 | 72.0 |
MS.gene85823.t1 | AT3G19130 | 29.766 | 299 | 163 | 12 | 26 | 285 | 109 | 399 | 9.66e-22 | 98.6 |
MS.gene85823.t1 | AT1G49600 | 25.904 | 332 | 205 | 10 | 18 | 318 | 112 | 433 | 1.19e-19 | 92.4 |
MS.gene85823.t1 | AT1G49600 | 25.532 | 282 | 175 | 9 | 115 | 374 | 121 | 389 | 9.39e-16 | 80.5 |
MS.gene85823.t1 | AT1G49600 | 27.000 | 300 | 183 | 9 | 18 | 286 | 112 | 406 | 3.03e-19 | 91.3 |
MS.gene85823.t1 | AT1G49600 | 24.756 | 307 | 193 | 10 | 115 | 399 | 121 | 411 | 2.35e-16 | 82.4 |
MS.gene85823.t1 | AT1G49600 | 27.000 | 300 | 183 | 9 | 18 | 286 | 112 | 406 | 3.03e-19 | 91.3 |
MS.gene85823.t1 | AT1G49600 | 24.756 | 307 | 193 | 10 | 115 | 399 | 121 | 411 | 2.35e-16 | 82.4 |
MS.gene85823.t1 | AT1G17370 | 26.298 | 289 | 166 | 8 | 26 | 283 | 55 | 327 | 3.06e-19 | 90.9 |
MS.gene85823.t1 | AT1G17370 | 27.018 | 285 | 162 | 9 | 104 | 364 | 49 | 311 | 8.90e-18 | 86.3 |
MS.gene85823.t1 | AT1G17370 | 28.000 | 175 | 106 | 5 | 204 | 377 | 55 | 210 | 3.25e-11 | 66.2 |
MS.gene85823.t1 | AT5G54900 | 23.875 | 289 | 192 | 7 | 26 | 291 | 61 | 344 | 6.61e-19 | 89.7 |
MS.gene85823.t1 | AT1G17370 | 26.027 | 292 | 166 | 8 | 26 | 283 | 55 | 330 | 7.35e-19 | 89.7 |
MS.gene85823.t1 | AT1G17370 | 26.736 | 288 | 162 | 9 | 104 | 364 | 49 | 314 | 2.26e-17 | 85.1 |
MS.gene85823.t1 | AT1G17370 | 28.000 | 175 | 106 | 5 | 204 | 377 | 55 | 210 | 3.65e-11 | 65.9 |
MS.gene85823.t1 | AT2G37220 | 29.412 | 187 | 104 | 3 | 27 | 186 | 93 | 278 | 1.09e-18 | 87.4 |
MS.gene85823.t1 | AT1G11650 | 25.614 | 285 | 177 | 9 | 6 | 265 | 44 | 318 | 1.54e-18 | 88.6 |
MS.gene85823.t1 | AT1G11650 | 21.724 | 290 | 213 | 8 | 114 | 396 | 63 | 345 | 1.42e-12 | 70.1 |
MS.gene85823.t1 | AT5G19350 | 24.453 | 274 | 171 | 6 | 23 | 265 | 22 | 290 | 3.88e-18 | 87.4 |
MS.gene85823.t1 | AT4G24770 | 31.343 | 201 | 124 | 6 | 193 | 390 | 139 | 328 | 3.57e-17 | 83.6 |
MS.gene85823.t1 | AT4G24770 | 30.994 | 171 | 109 | 3 | 23 | 185 | 148 | 317 | 1.53e-15 | 78.6 |
MS.gene85823.t1 | AT4G24770 | 30.168 | 179 | 117 | 5 | 113 | 285 | 150 | 326 | 4.51e-11 | 65.1 |
MS.gene85823.t1 | AT4G24770 | 31.343 | 201 | 124 | 6 | 193 | 390 | 139 | 328 | 3.57e-17 | 83.6 |
MS.gene85823.t1 | AT4G24770 | 30.994 | 171 | 109 | 3 | 23 | 185 | 148 | 317 | 1.53e-15 | 78.6 |
MS.gene85823.t1 | AT4G24770 | 30.168 | 179 | 117 | 5 | 113 | 285 | 150 | 326 | 4.51e-11 | 65.1 |
MS.gene85823.t1 | AT5G19350 | 24.820 | 278 | 169 | 6 | 23 | 265 | 22 | 294 | 4.12e-17 | 84.3 |
MS.gene85823.t1 | AT5G19350 | 22.330 | 309 | 210 | 8 | 114 | 400 | 25 | 325 | 2.44e-15 | 79.0 |
MS.gene85823.t1 | AT1G11650 | 25.185 | 270 | 167 | 9 | 6 | 250 | 44 | 303 | 8.27e-17 | 82.0 |
MS.gene85823.t1 | AT1G11650 | 22.892 | 249 | 178 | 8 | 114 | 355 | 63 | 304 | 2.82e-11 | 65.5 |
MS.gene85823.t1 | AT3G52150 | 32.759 | 174 | 110 | 6 | 205 | 375 | 78 | 247 | 1.74e-16 | 80.1 |
MS.gene85823.t1 | AT3G52150 | 32.759 | 174 | 110 | 6 | 205 | 375 | 78 | 247 | 1.74e-16 | 80.1 |
MS.gene85823.t1 | AT4G27000 | 23.755 | 261 | 174 | 7 | 26 | 266 | 81 | 336 | 4.92e-16 | 81.3 |
MS.gene85823.t1 | AT4G27000 | 21.831 | 284 | 209 | 8 | 114 | 391 | 81 | 357 | 1.52e-12 | 70.1 |
MS.gene85823.t1 | AT1G45100 | 27.181 | 298 | 159 | 9 | 22 | 270 | 155 | 443 | 5.81e-16 | 81.3 |
MS.gene85823.t1 | AT5G50250 | 29.444 | 180 | 118 | 3 | 23 | 194 | 111 | 289 | 7.31e-16 | 79.0 |
MS.gene85823.t1 | AT5G50250 | 30.570 | 193 | 117 | 5 | 200 | 388 | 110 | 289 | 3.07e-15 | 77.0 |
MS.gene85823.t1 | AT5G50250 | 29.609 | 179 | 118 | 5 | 113 | 285 | 113 | 289 | 1.08e-12 | 69.3 |
MS.gene85823.t1 | AT1G60000 | 28.571 | 168 | 113 | 3 | 24 | 185 | 84 | 250 | 2.74e-15 | 76.6 |
MS.gene85823.t1 | AT1G01080 | 31.088 | 193 | 116 | 6 | 107 | 284 | 102 | 292 | 7.39e-15 | 75.9 |
MS.gene85823.t1 | AT1G01080 | 32.000 | 175 | 103 | 5 | 107 | 266 | 102 | 275 | 1.01e-14 | 75.5 |
MS.gene85823.t1 | AT4G00830 | 25.660 | 265 | 187 | 6 | 25 | 286 | 116 | 373 | 1.05e-14 | 77.4 |
MS.gene85823.t1 | AT4G00830 | 23.138 | 376 | 228 | 10 | 113 | 460 | 116 | 458 | 4.42e-12 | 69.3 |
MS.gene85823.t1 | AT4G00830 | 25.660 | 265 | 187 | 6 | 25 | 286 | 116 | 373 | 1.05e-14 | 77.4 |
MS.gene85823.t1 | AT4G00830 | 23.138 | 376 | 228 | 10 | 113 | 460 | 116 | 458 | 4.42e-12 | 69.3 |
MS.gene85823.t1 | AT4G00830 | 25.660 | 265 | 187 | 6 | 25 | 286 | 116 | 373 | 1.05e-14 | 77.4 |
MS.gene85823.t1 | AT4G00830 | 23.138 | 376 | 228 | 10 | 113 | 460 | 116 | 458 | 4.42e-12 | 69.3 |
MS.gene85823.t1 | AT1G01080 | 30.928 | 194 | 116 | 6 | 107 | 284 | 102 | 293 | 2.52e-14 | 74.3 |
MS.gene85823.t1 | AT3G52380 | 23.164 | 177 | 120 | 3 | 23 | 183 | 114 | 290 | 3.50e-14 | 74.3 |
MS.gene85823.t1 | AT1G47500 | 29.268 | 164 | 106 | 6 | 23 | 176 | 101 | 264 | 4.77e-14 | 73.9 |
MS.gene85823.t1 | AT4G00830 | 26.038 | 265 | 178 | 7 | 25 | 286 | 116 | 365 | 5.20e-14 | 75.1 |
MS.gene85823.t1 | AT4G00830 | 23.056 | 373 | 224 | 10 | 113 | 460 | 116 | 450 | 5.50e-11 | 65.9 |
MS.gene85823.t1 | AT4G00830 | 26.038 | 265 | 178 | 7 | 25 | 286 | 116 | 365 | 5.20e-14 | 75.1 |
MS.gene85823.t1 | AT4G00830 | 23.056 | 373 | 224 | 10 | 113 | 460 | 116 | 450 | 5.50e-11 | 65.9 |
MS.gene85823.t1 | AT2G35410 | 28.108 | 185 | 120 | 4 | 205 | 384 | 97 | 273 | 1.26e-13 | 72.4 |
MS.gene85823.t1 | AT2G35410 | 27.419 | 186 | 120 | 4 | 27 | 198 | 97 | 281 | 6.09e-12 | 67.4 |
MS.gene85823.t1 | AT2G47310 | 25.439 | 228 | 145 | 6 | 190 | 408 | 97 | 308 | 3.44e-13 | 72.8 |
MS.gene85823.t1 | AT2G44710 | 22.441 | 254 | 181 | 5 | 27 | 272 | 131 | 376 | 5.42e-13 | 72.4 |
MS.gene85823.t1 | AT2G44710 | 22.441 | 254 | 181 | 5 | 27 | 272 | 216 | 461 | 9.00e-13 | 72.0 |
MS.gene85823.t1 | AT2G44710 | 22.441 | 254 | 181 | 5 | 27 | 272 | 216 | 461 | 9.00e-13 | 72.0 |
MS.gene85823.t1 | AT1G47490 | 27.222 | 180 | 121 | 6 | 23 | 192 | 99 | 278 | 1.09e-12 | 69.7 |
MS.gene85823.t1 | AT1G47490 | 30.345 | 145 | 86 | 4 | 228 | 369 | 129 | 261 | 6.70e-11 | 64.3 |
MS.gene85823.t1 | AT5G03580 | 38.750 | 80 | 49 | 0 | 308 | 387 | 18 | 97 | 2.57e-12 | 63.9 |
MS.gene85823.t1 | AT4G16280 | 28.481 | 158 | 110 | 2 | 21 | 175 | 116 | 273 | 6.58e-12 | 68.6 |
MS.gene85823.t1 | AT4G16280 | 24.468 | 188 | 124 | 4 | 205 | 388 | 122 | 295 | 1.43e-11 | 67.8 |
MS.gene85823.t1 | AT4G16280 | 28.481 | 158 | 110 | 2 | 21 | 175 | 41 | 198 | 9.64e-12 | 68.6 |
MS.gene85823.t1 | AT4G16280 | 24.468 | 188 | 124 | 4 | 205 | 388 | 47 | 220 | 3.07e-11 | 67.0 |
MS.gene85823.t1 | AT2G16940 | 26.882 | 186 | 117 | 4 | 35 | 203 | 51 | 234 | 1.25e-11 | 67.4 |
MS.gene85823.t1 | AT2G16940 | 26.882 | 186 | 117 | 4 | 35 | 203 | 51 | 234 | 1.25e-11 | 67.4 |
MS.gene85823.t1 | AT5G54580 | 31.429 | 105 | 71 | 1 | 283 | 386 | 32 | 136 | 1.39e-11 | 63.5 |
MS.gene85823.t1 | AT4G16280 | 28.481 | 158 | 110 | 2 | 21 | 175 | 116 | 273 | 1.39e-11 | 68.2 |
MS.gene85823.t1 | AT4G16280 | 24.468 | 188 | 124 | 4 | 205 | 388 | 122 | 295 | 2.80e-11 | 67.0 |
MS.gene85823.t1 | AT3G46020 | 32.941 | 85 | 56 | 1 | 307 | 390 | 7 | 91 | 1.91e-11 | 61.2 |
MS.gene85823.t1 | AT2G16940 | 26.882 | 186 | 117 | 4 | 35 | 203 | 192 | 375 | 2.32e-11 | 67.0 |
MS.gene85823.t1 | AT4G00830 | 23.342 | 377 | 226 | 11 | 113 | 460 | 116 | 458 | 3.23e-11 | 66.2 |
MS.gene85823.t1 | AT4G00830 | 24.436 | 266 | 189 | 7 | 25 | 286 | 116 | 373 | 4.54e-11 | 65.9 |
MS.gene85823.t1 | AT2G16940 | 26.882 | 186 | 117 | 4 | 35 | 203 | 241 | 424 | 4.03e-11 | 66.2 |
Find 130 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCCTCAACAATTGTATTT+TGG | 0.074455 | 6.4:+14577351 | MS.gene85823:CDS |
TGATAGCAATGGTAAATCTA+TGG | 0.257280 | 6.4:+14575916 | MS.gene85823:CDS |
AATGGAAATTCTAAATGTTT+TGG | 0.270815 | 6.4:+14576193 | MS.gene85823:CDS |
AGTCCTTCGCTTAGTTTCAT+TGG | 0.308146 | 6.4:+14578039 | MS.gene85823:CDS |
CGTCAAGAAAGGTCGGAAAA+TGG | 0.309014 | 6.4:+14576049 | MS.gene85823:CDS |
GCAACACTAGATTGCATATC+TGG | 0.314810 | 6.4:-14577438 | None:intergenic |
ACCTTGGCTGTCTGATTGTT+TGG | 0.322990 | 6.4:-14577923 | None:intergenic |
GCTGTATTGTTGAACGGAAC+TGG | 0.327902 | 6.4:+14574431 | MS.gene85823:CDS |
GGAATGAGCGGAAAGATAAT+TGG | 0.329939 | 6.4:+14576842 | MS.gene85823:CDS |
ACAGCCGGAACCGCTGTCTT+AGG | 0.339261 | 6.4:-14574413 | None:intergenic |
AGAATGCTTCTCTTTATGTT+GGG | 0.348501 | 6.4:+14574462 | MS.gene85823:CDS |
TTGGTCAGGTTGTTTCAATC+AGG | 0.350230 | 6.4:+14574537 | MS.gene85823:CDS |
GATCCTACCATCCGGAAAAC+TGG | 0.354271 | 6.4:+14575788 | MS.gene85823:CDS |
TGGTATGGCAGGATGTAATT+TGG | 0.356572 | 6.4:-14577462 | None:intergenic |
GATTGGAATGTTGTTGGAAT+TGG | 0.376221 | 6.4:+14577946 | MS.gene85823:CDS |
AATGGTAAATCTATGGGATA+TGG | 0.377494 | 6.4:+14575923 | MS.gene85823:CDS |
ACTTTCATCTTCAATTCTTC+AGG | 0.379295 | 6.4:-14578001 | None:intergenic |
ATATAAAACCTTCCCATCAT+TGG | 0.388268 | 6.4:-14576281 | None:intergenic |
TGATCTCTAGCAATTCTTGC+AGG | 0.393741 | 6.4:-14577309 | None:intergenic |
AGATAGGAAAGCTCGTTTGC+AGG | 0.396946 | 6.4:+14576904 | MS.gene85823:CDS |
CCTGGGTCTGTTGAACTTGT+TGG | 0.398574 | 6.4:-14577542 | None:intergenic |
GTCCTTCGCTTAGTTTCATT+GGG | 0.399283 | 6.4:+14578040 | MS.gene85823:CDS |
TGAGAAAACATGATACGAAT+TGG | 0.404848 | 6.4:-14575761 | None:intergenic |
TATGAACTGTTCAATCAGAT+TGG | 0.408807 | 6.4:+14574518 | MS.gene85823:CDS |
CGCTTCCTCTGGAGTGGAAA+AGG | 0.409443 | 6.4:-14576708 | None:intergenic |
CTTTATGTTGGGGATCTTGA+AGG | 0.409712 | 6.4:+14574473 | MS.gene85823:CDS |
GAGAATGCTTCTCTTTATGT+TGG | 0.411940 | 6.4:+14574461 | MS.gene85823:CDS |
CGGTCATCCTGGACATGGGA+TGG | 0.416047 | 6.4:+14577497 | MS.gene85823:CDS |
AATCAGACAGCCAAGGTGAT+TGG | 0.417793 | 6.4:+14577929 | MS.gene85823:CDS |
TGAGCCACAACAACATATAA+TGG | 0.419320 | 6.4:-14576872 | None:intergenic |
TTGTTTCAATCAGGGTTTGT+AGG | 0.420245 | 6.4:+14574546 | MS.gene85823:CDS |
ATCACCTAAGACAGCGGTTC+CGG | 0.420317 | 6.4:+14574409 | MS.gene85823:CDS |
CTGATGCCGCCTCAACCAAC+TGG | 0.441454 | 6.4:+14577390 | MS.gene85823:CDS |
ACATGGGATGGGTGTGCGTC+CGG | 0.449766 | 6.4:+14577509 | MS.gene85823:CDS |
TTGAATTACACTCCTTTGCA+TGG | 0.453156 | 6.4:+14575734 | MS.gene85823:CDS |
CTAGCAATTCTTGCAGGAAA+AGG | 0.458021 | 6.4:-14577303 | None:intergenic |
CATCATTAATACTCTCATCA+AGG | 0.465608 | 6.4:-14576417 | None:intergenic |
ACAGCTTTACTCGCTTCCTC+TGG | 0.467039 | 6.4:-14576719 | None:intergenic |
TCTCAAATCAATGCTTCGGT+TGG | 0.468800 | 6.4:+14577273 | MS.gene85823:CDS |
GACCAAGGGTTTAGATGTAA+TGG | 0.469455 | 6.4:+14577673 | MS.gene85823:CDS |
CATCGGTATCTGTTTCCAAA+AGG | 0.475625 | 6.4:-14576105 | None:intergenic |
TGTTTCAATCAGGGTTTGTA+GGG | 0.476696 | 6.4:+14574547 | MS.gene85823:CDS |
AATGGCACTACAACCAATGA+TGG | 0.477121 | 6.4:+14576268 | MS.gene85823:CDS |
CTTCAGAGGCACGGTCATCC+TGG | 0.479899 | 6.4:+14577486 | MS.gene85823:CDS |
AATTGTTGAGGAGCAAGTCT+TGG | 0.480256 | 6.4:-14577342 | None:intergenic |
TTGTTGGTTGAACAGATGTT+GGG | 0.481342 | 6.4:+14577866 | MS.gene85823:intron |
CAGATGACGCAGTCGTCTCT+TGG | 0.483404 | 6.4:+14574572 | MS.gene85823:CDS |
CCGCCTCAACCAACTGGATA+CGG | 0.486165 | 6.4:+14577396 | MS.gene85823:CDS |
GAGCCAAGCTGATCATAAAT+CGG | 0.493436 | 6.4:-14578068 | None:intergenic |
CATGGCCATAGCAAGGGCTT+CGG | 0.496652 | 6.4:+14576677 | MS.gene85823:CDS |
ACACTAACCATCACGAGCAT+TGG | 0.499475 | 6.4:-14574615 | None:intergenic |
TGTTGGGGATCTTGAAGGGA+AGG | 0.503115 | 6.4:+14574478 | MS.gene85823:CDS |
TGAACAGTTATATCCTCTTG+TGG | 0.504319 | 6.4:+14577889 | MS.gene85823:CDS |
ACTGTTCAATCAGATTGGTC+AGG | 0.508361 | 6.4:+14574523 | MS.gene85823:CDS |
CGAAGCCCTTGCTATGGCCA+TGG | 0.508881 | 6.4:-14576676 | None:intergenic |
TGGCTCAGCGCAAAGAAGAT+AGG | 0.509388 | 6.4:+14576888 | MS.gene85823:CDS |
ACATACACATTAGTGAACTT+AGG | 0.510507 | 6.4:-14576076 | None:intergenic |
GATAGCAATGGTAAATCTAT+GGG | 0.511528 | 6.4:+14575917 | MS.gene85823:CDS |
TTCTAGATTAATGGAATGAG+CGG | 0.511670 | 6.4:+14576830 | MS.gene85823:intron |
TGGAACTGTACTTTCTTGCA+AGG | 0.513485 | 6.4:+14575886 | MS.gene85823:CDS |
CTTAAAAGCAAATTCAAAGA+TGG | 0.515780 | 6.4:-14577742 | None:intergenic |
GCCTCTGAAGGTGGTATGGC+AGG | 0.516866 | 6.4:-14577473 | None:intergenic |
GACCATTACATCTAAACCCT+TGG | 0.518343 | 6.4:-14577675 | None:intergenic |
CAAGGTGATTGGAATGTTGT+TGG | 0.518744 | 6.4:+14577940 | MS.gene85823:CDS |
GAATGCTTCTCTTTATGTTG+GGG | 0.523074 | 6.4:+14574463 | MS.gene85823:CDS |
CGCACACCCATCCCATGTCC+AGG | 0.525293 | 6.4:-14577504 | None:intergenic |
ACTTGTTGGAAGTTTCCAAC+CGG | 0.525626 | 6.4:-14577528 | None:intergenic |
TATCTGGTATGAATTGTTGC+TGG | 0.528225 | 6.4:-14577422 | None:intergenic |
TGGTCAGGTTGTTTCAATCA+GGG | 0.533659 | 6.4:+14574538 | MS.gene85823:CDS |
GGGATGGGTGTGCGTCCGGT+TGG | 0.537046 | 6.4:+14577513 | MS.gene85823:CDS |
TGGAACAATAACTTCTTGCA+AGG | 0.539079 | 6.4:+14576468 | MS.gene85823:CDS |
GTGATCATGAATGATGAGAA+TGG | 0.541704 | 6.4:+14576175 | MS.gene85823:CDS |
GAACAGTTATATCCTCTTGT+GGG | 0.541800 | 6.4:+14577890 | MS.gene85823:CDS |
CAAGCTGATCATAAATCGGC+AGG | 0.544038 | 6.4:-14578064 | None:intergenic |
AGGGTTTAGATGTAATGGTC+GGG | 0.544363 | 6.4:+14577678 | MS.gene85823:CDS |
TATCCGTATCCAGTTGGTTG+AGG | 0.551189 | 6.4:-14577399 | None:intergenic |
CTCATCGTGATCCTACCATC+CGG | 0.556734 | 6.4:+14575780 | MS.gene85823:CDS |
CCGTGCCTCTGAAGGTGGTA+TGG | 0.557228 | 6.4:-14577477 | None:intergenic |
TGCTGGTATCCGTATCCAGT+TGG | 0.557915 | 6.4:-14577405 | None:intergenic |
CAGGATGACCGTGCCTCTGA+AGG | 0.560075 | 6.4:-14577485 | None:intergenic |
AGGCACGGTCATCCTGGACA+TGG | 0.560221 | 6.4:+14577492 | MS.gene85823:CDS |
GAAGCCATTATATGTTGTTG+TGG | 0.561134 | 6.4:+14576868 | MS.gene85823:CDS |
GGTCATCCTGGACATGGGAT+GGG | 0.561475 | 6.4:+14577498 | MS.gene85823:CDS |
TGAATTACACTCCTTTGCAT+GGG | 0.561984 | 6.4:+14575735 | MS.gene85823:CDS |
CTACCTCGCAACTCAGACCA+AGG | 0.564265 | 6.4:+14577658 | MS.gene85823:CDS |
TGCCCAAAATACAATTGTTG+AGG | 0.566907 | 6.4:-14577354 | None:intergenic |
GGGCTCAAAGGAAATGTGAA+AGG | 0.568473 | 6.4:+14576311 | MS.gene85823:CDS |
TTTATGTTGGGGATCTTGAA+GGG | 0.568972 | 6.4:+14574474 | MS.gene85823:CDS |
TGATACCCATGGCCATAGCA+AGG | 0.569779 | 6.4:+14576670 | MS.gene85823:CDS |
GAAGCCCTTGCTATGGCCAT+GGG | 0.569866 | 6.4:-14576675 | None:intergenic |
CAAAACCGAAGCCCTTGCTA+TGG | 0.570118 | 6.4:-14576682 | None:intergenic |
GATGAAAGTGTCTGAGGCAA+TGG | 0.572342 | 6.4:+14578015 | MS.gene85823:CDS |
CCGTATCCAGTTGGTTGAGG+CGG | 0.576974 | 6.4:-14577396 | None:intergenic |
TCCTGCCATACCACCTTCAG+AGG | 0.579631 | 6.4:+14577472 | MS.gene85823:CDS |
TATTCGGCGTCAAGAAAGGT+CGG | 0.581766 | 6.4:+14576042 | MS.gene85823:CDS |
CTTCAGGTGACTTAATCAGA+TGG | 0.583273 | 6.4:-14577985 | None:intergenic |
CACTACAACCAATGATGGGA+AGG | 0.586007 | 6.4:+14576273 | MS.gene85823:CDS |
AACTGTACTTTCTTGCAAGG+TGG | 0.587386 | 6.4:+14575889 | MS.gene85823:CDS |
GGCTCAAAGGAAATGTGAAA+GGG | 0.587531 | 6.4:+14576312 | MS.gene85823:CDS |
TATATGTGGGAAGGGCTCAA+AGG | 0.589290 | 6.4:+14576299 | MS.gene85823:CDS |
CAGGTAATGCTTGATACCCA+TGG | 0.589829 | 6.4:+14576659 | MS.gene85823:intron |
CAACAACATTCCAATCACCT+TGG | 0.589905 | 6.4:-14577939 | None:intergenic |
CGAATTGGCTTCCCATGCAA+AGG | 0.589987 | 6.4:-14575746 | None:intergenic |
GTTGGAATTGGACAAGTCAG+AGG | 0.590331 | 6.4:+14577958 | MS.gene85823:CDS |
AATTACTCCAATGCTCGTGA+TGG | 0.599987 | 6.4:+14574608 | MS.gene85823:CDS |
AAGGGTTTAGATGTAATGGT+CGG | 0.601868 | 6.4:+14577677 | MS.gene85823:CDS |
GTTCCGTTCAACAATACAGC+CGG | 0.602823 | 6.4:-14574428 | None:intergenic |
ATTGAAGATGAAAGTGTCTG+AGG | 0.603122 | 6.4:+14578009 | MS.gene85823:CDS |
GTTCCGGCTGTATTGTTGAA+CGG | 0.606681 | 6.4:+14574425 | MS.gene85823:CDS |
TGTTTCATCACCTAAGACAG+CGG | 0.607549 | 6.4:+14574403 | MS.gene85823:CDS |
TTTACTCGCTTCCTCTGGAG+TGG | 0.611567 | 6.4:-14576714 | None:intergenic |
GATACCCATGGCCATAGCAA+GGG | 0.616131 | 6.4:+14576671 | MS.gene85823:CDS |
GCTGCAGTTGAGAAGTTGAA+TGG | 0.620188 | 6.4:+14576250 | MS.gene85823:CDS |
GGCACGGTCATCCTGGACAT+GGG | 0.625174 | 6.4:+14577493 | MS.gene85823:CDS |
GATGACCGTGCCTCTGAAGG+TGG | 0.629568 | 6.4:-14577482 | None:intergenic |
TATTGTTGAACGGAACTGGA+CGG | 0.631409 | 6.4:+14574435 | MS.gene85823:CDS |
GGTTGAGGCGGCATCAGACG+AGG | 0.631837 | 6.4:-14577384 | None:intergenic |
TGGTCGGGAAAATCAACACC+GGG | 0.632812 | 6.4:+14577693 | MS.gene85823:CDS |
GGTGTAAGATGACCCACAAG+AGG | 0.654868 | 6.4:-14577902 | None:intergenic |
CCATACCACCTTCAGAGGCA+CGG | 0.655103 | 6.4:+14577477 | MS.gene85823:CDS |
GACCCAATGAAACTAAGCGA+AGG | 0.656004 | 6.4:-14578042 | None:intergenic |
TGACACATCAATAGATAACA+AGG | 0.656214 | 6.4:+14575838 | MS.gene85823:CDS |
ATGGCACTACAACCAATGAT+GGG | 0.657650 | 6.4:+14576269 | MS.gene85823:CDS |
ATGGTCGGGAAAATCAACAC+CGG | 0.658531 | 6.4:+14577692 | MS.gene85823:CDS |
AACCCTTGGTCTGAGTTGCG+AGG | 0.663189 | 6.4:-14577661 | None:intergenic |
CCAACAAGTTCAACAGACCC+AGG | 0.670862 | 6.4:+14577542 | MS.gene85823:CDS |
TCTTGAAGGGAAGGTGAACG+AGG | 0.673421 | 6.4:+14574487 | MS.gene85823:CDS |
TACCTCGCAACTCAGACCAA+GGG | 0.676981 | 6.4:+14577659 | MS.gene85823:CDS |
ACCAAACAATCAGACAGCCA+AGG | 0.679325 | 6.4:+14577922 | MS.gene85823:CDS |
AAGGTGGCTCTTGATAGCAA+TGG | 0.697793 | 6.4:+14575905 | MS.gene85823:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACATGATTATAAATACT+AGG | - | chr6.4:14574842-14574861 | None:intergenic | 15.0% |
!! | AAACATGATTATAAATACTA+GGG | - | chr6.4:14574841-14574860 | None:intergenic | 15.0% |
!! | TTAACCTTAGAATTAAATTA+TGG | + | chr6.4:14576965-14576984 | MS.gene85823:intron | 15.0% |
!! | TTATAATATATTCTTGATGA+TGG | + | chr6.4:14574657-14574676 | MS.gene85823:intron | 15.0% |
!!! | ATAGGTTTAATTTTTTAGTA+AGG | - | chr6.4:14577816-14577835 | None:intergenic | 15.0% |
!!! | GCAATTCTTAATAAATTTTT+AGG | + | chr6.4:14574769-14574788 | MS.gene85823:intron | 15.0% |
!!! | TTTTTCTTTTTCTAGATTAA+TGG | + | chr6.4:14576821-14576840 | MS.gene85823:intron | 15.0% |
!!! | TTTTTTGAAAAACTATTTTG+AGG | + | chr6.4:14575545-14575564 | MS.gene85823:intron | 15.0% |
!! | ATACTTAAAGAATAAATACC+TGG | - | chr6.4:14577563-14577582 | None:intergenic | 20.0% |
!! | ATGTTAAATCTAACTTTCTT+TGG | + | chr6.4:14577842-14577861 | MS.gene85823:intron | 20.0% |
!! | CTAAAAAATTAAACCTATCA+TGG | + | chr6.4:14577818-14577837 | MS.gene85823:intron | 20.0% |
!! | GAAAGATATGAAAAATTACA+AGG | + | chr6.4:14576373-14576392 | MS.gene85823:CDS | 20.0% |
!! | GATTGAAAAAAGCTTATATT+TGG | - | chr6.4:14576783-14576802 | None:intergenic | 20.0% |
!! | TACATATAATATGTTTCTTC+AGG | + | chr6.4:14576640-14576659 | MS.gene85823:intron | 20.0% |
!! | TACTTAAAGAATAAATACCT+GGG | - | chr6.4:14577562-14577581 | None:intergenic | 20.0% |
!! | TGATTTAGAAATAAGTTCAT+AGG | + | chr6.4:14577123-14577142 | MS.gene85823:intron | 20.0% |
!! | TTAGAAAGAAAACAGATTTA+GGG | + | chr6.4:14574731-14574750 | MS.gene85823:intron | 20.0% |
!! | TTGTCCATAATTTAATTCTA+AGG | - | chr6.4:14576972-14576991 | None:intergenic | 20.0% |
!!! | AAGAAAGATTAAATTTGCTT+TGG | - | chr6.4:14577189-14577208 | None:intergenic | 20.0% |
!!! | AAGGTTTTTCAAGTATAAAT+TGG | - | chr6.4:14576401-14576420 | None:intergenic | 20.0% |
!!! | AATGGAAATTCTAAATGTTT+TGG | + | chr6.4:14576193-14576212 | MS.gene85823:CDS | 20.0% |
!!! | TTTATGTAGCGTATTTTATT+CGG | + | chr6.4:14576026-14576045 | MS.gene85823:CDS | 20.0% |
! | ATGAGTTACATTCGAAATAA+AGG | + | chr6.4:14575568-14575587 | MS.gene85823:intron | 25.0% |
! | CTTAAAAGCAAATTCAAAGA+TGG | - | chr6.4:14577745-14577764 | None:intergenic | 25.0% |
! | GTATTTAAACAAGTTTGTGA+AGG | - | chr6.4:14577242-14577261 | None:intergenic | 25.0% |
! | GTTAGAAAGAAAACAGATTT+AGG | + | chr6.4:14574730-14574749 | MS.gene85823:intron | 25.0% |
! | TAGATTTAACATACCATGAT+AGG | - | chr6.4:14577834-14577853 | None:intergenic | 25.0% |
! | TCCTTGTCTATTGTTAAAAT+TGG | + | chr6.4:14574966-14574985 | MS.gene85823:intron | 25.0% |
! | TCTATTGTTAAAATTGGTGT+AGG | + | chr6.4:14574972-14574991 | MS.gene85823:intron | 25.0% |
!! | AAATGTAGAATAGTTTGTGA+TGG | + | chr6.4:14575437-14575456 | MS.gene85823:intron | 25.0% |
!! | ATTTTCTCAAATCAATGCTT+CGG | + | chr6.4:14577269-14577288 | MS.gene85823:CDS | 25.0% |
!! | GTTGGTTATTTAGGTTTATA+CGG | + | chr6.4:14575102-14575121 | MS.gene85823:intron | 25.0% |
!! | TCACAAACTTGTTTAAATAC+AGG | + | chr6.4:14577242-14577261 | MS.gene85823:intron | 25.0% |
!! | TTAATTGCATGCATTTTGTT+TGG | + | chr6.4:14575516-14575535 | MS.gene85823:intron | 25.0% |
!! | TTTTAGTAAGGTCATGATAT+TGG | - | chr6.4:14577804-14577823 | None:intergenic | 25.0% |
!!! | ACCAATTTTAACAATAGACA+AGG | - | chr6.4:14574970-14574989 | None:intergenic | 25.0% |
!!! | CATGATAGTTTTGTTTCATT+TGG | + | chr6.4:14575866-14575885 | MS.gene85823:CDS | 25.0% |
!!! | TAATTGCATGCATTTTGTTT+GGG | + | chr6.4:14575517-14575536 | MS.gene85823:intron | 25.0% |
AATGGTAAATCTATGGGATA+TGG | + | chr6.4:14575923-14575942 | MS.gene85823:CDS | 30.0% | |
ACAAACTTTCAGTTGAGTTA+AGG | - | chr6.4:14575301-14575320 | None:intergenic | 30.0% | |
ACATACACATTAGTGAACTT+AGG | - | chr6.4:14576079-14576098 | None:intergenic | 30.0% | |
ACTAGTAAAACAGGAAAACT+CGG | - | chr6.4:14575138-14575157 | None:intergenic | 30.0% | |
ACTTTCATCTTCAATTCTTC+AGG | - | chr6.4:14578004-14578023 | None:intergenic | 30.0% | |
AGAATGCTTCTCTTTATGTT+GGG | + | chr6.4:14574462-14574481 | MS.gene85823:CDS | 30.0% | |
ATATAAAACCTTCCCATCAT+TGG | - | chr6.4:14576284-14576303 | None:intergenic | 30.0% | |
ATGCACGTATACAAAATCAA+GGG | - | chr6.4:14576563-14576582 | None:intergenic | 30.0% | |
ATTGTATGAGTAGATAGTGT+AGG | + | chr6.4:14575004-14575023 | MS.gene85823:intron | 30.0% | |
CATCATTAATACTCTCATCA+AGG | - | chr6.4:14576420-14576439 | None:intergenic | 30.0% | |
GATAGCAATGGTAAATCTAT+GGG | + | chr6.4:14575917-14575936 | MS.gene85823:CDS | 30.0% | |
TAGGACTATGTGATAACTAA+AGG | + | chr6.4:14574788-14574807 | MS.gene85823:intron | 30.0% | |
TATAGCCAAACTAGTAAAAC+AGG | - | chr6.4:14575147-14575166 | None:intergenic | 30.0% | |
TATGAACTGTTCAATCAGAT+TGG | + | chr6.4:14574518-14574537 | MS.gene85823:CDS | 30.0% | |
TGACACATCAATAGATAACA+AGG | + | chr6.4:14575838-14575857 | MS.gene85823:CDS | 30.0% | |
TGAGAAAACATGATACGAAT+TGG | - | chr6.4:14575764-14575783 | None:intergenic | 30.0% | |
TGATAGCAATGGTAAATCTA+TGG | + | chr6.4:14575916-14575935 | MS.gene85823:CDS | 30.0% | |
TTCTAGATTAATGGAATGAG+CGG | + | chr6.4:14576830-14576849 | MS.gene85823:intron | 30.0% | |
! | AAAAAGCTTTTCAGCACATA+TGG | + | chr6.4:14576136-14576155 | MS.gene85823:CDS | 30.0% |
! | AAAGAGATGTTTTCTGAGTT+TGG | + | chr6.4:14576448-14576467 | MS.gene85823:CDS | 30.0% |
! | AAAGTGTGCCATTGAAAAAT+TGG | + | chr6.4:14575976-14575995 | MS.gene85823:CDS | 30.0% |
! | ATGTGCTGAAAAGCTTTTTA+AGG | - | chr6.4:14576135-14576154 | None:intergenic | 30.0% |
! | CTCCTCAACAATTGTATTTT+GGG | + | chr6.4:14577352-14577371 | MS.gene85823:CDS | 30.0% |
! | GTTTTCCTGTTTTACTAGTT+TGG | + | chr6.4:14575139-14575158 | MS.gene85823:intron | 30.0% |
! | TAGGTTTATACGGTGTTTTT+GGG | + | chr6.4:14575112-14575131 | MS.gene85823:intron | 30.0% |
! | TGTGTATGTGAAAAACCTTT+TGG | + | chr6.4:14576090-14576109 | MS.gene85823:CDS | 30.0% |
! | TTACTAGTTTGGCTATATAG+TGG | + | chr6.4:14575150-14575169 | MS.gene85823:intron | 30.0% |
! | TTAGGTTTATACGGTGTTTT+TGG | + | chr6.4:14575111-14575130 | MS.gene85823:intron | 30.0% |
!! | TCTAACTTTCTTTGGTTTGT+TGG | + | chr6.4:14577850-14577869 | MS.gene85823:intron | 30.0% |
!!! | AAGCTTTTTAAGGTCTTCAT+CGG | - | chr6.4:14576125-14576144 | None:intergenic | 30.0% |
!!! | AGATTGTTTTTAGGTGTTCT+AGG | + | chr6.4:14575031-14575050 | MS.gene85823:intron | 30.0% |
AAGGGTTTAGATGTAATGGT+CGG | + | chr6.4:14577677-14577696 | MS.gene85823:CDS | 35.0% | |
ACTATAGAGAAGAAGTGAAG+TGG | - | chr6.4:14577088-14577107 | None:intergenic | 35.0% | |
AGAACTTGTAGAGGAAGTAA+AGG | + | chr6.4:14574903-14574922 | MS.gene85823:intron | 35.0% | |
ATGTACTTAAACCCACTTCA+AGG | - | chr6.4:14577025-14577044 | None:intergenic | 35.0% | |
CATGCACGTATACAAAATCA+AGG | - | chr6.4:14576564-14576583 | None:intergenic | 35.0% | |
GAACAGTTATATCCTCTTGT+GGG | + | chr6.4:14577890-14577909 | MS.gene85823:CDS | 35.0% | |
GAAGCCATTATATGTTGTTG+TGG | + | chr6.4:14576868-14576887 | MS.gene85823:CDS | 35.0% | |
GAATGCTTCTCTTTATGTTG+GGG | + | chr6.4:14574463-14574482 | MS.gene85823:CDS | 35.0% | |
GAGAATGCTTCTCTTTATGT+TGG | + | chr6.4:14574461-14574480 | MS.gene85823:CDS | 35.0% | |
GATTGGAATGTTGTTGGAAT+TGG | + | chr6.4:14577946-14577965 | MS.gene85823:CDS | 35.0% | |
GTGATCATGAATGATGAGAA+TGG | + | chr6.4:14576175-14576194 | MS.gene85823:CDS | 35.0% | |
TATCTACTCATACAATCTCC+AGG | - | chr6.4:14575000-14575019 | None:intergenic | 35.0% | |
TATCTGGTATGAATTGTTGC+TGG | - | chr6.4:14577425-14577444 | None:intergenic | 35.0% | |
TGAACAGTTATATCCTCTTG+TGG | + | chr6.4:14577889-14577908 | MS.gene85823:CDS | 35.0% | |
TGAATTACACTCCTTTGCAT+GGG | + | chr6.4:14575735-14575754 | MS.gene85823:CDS | 35.0% | |
TGAGCCACAACAACATATAA+TGG | - | chr6.4:14576875-14576894 | None:intergenic | 35.0% | |
TGCCCAAAATACAATTGTTG+AGG | - | chr6.4:14577357-14577376 | None:intergenic | 35.0% | |
TGGAACAATAACTTCTTGCA+AGG | + | chr6.4:14576468-14576487 | MS.gene85823:CDS | 35.0% | |
TGTACTTAAACCCACTTCAA+GGG | - | chr6.4:14577024-14577043 | None:intergenic | 35.0% | |
TGTTTCAATCAGGGTTTGTA+GGG | + | chr6.4:14574547-14574566 | MS.gene85823:CDS | 35.0% | |
TTAAAATTGGTGTAGGATCC+TGG | + | chr6.4:14574979-14574998 | MS.gene85823:intron | 35.0% | |
TTGAATTACACTCCTTTGCA+TGG | + | chr6.4:14575734-14575753 | MS.gene85823:CDS | 35.0% | |
TTGTTTCAATCAGGGTTTGT+AGG | + | chr6.4:14574546-14574565 | MS.gene85823:CDS | 35.0% | |
TTTATGTTGGGGATCTTGAA+GGG | + | chr6.4:14574474-14574493 | MS.gene85823:CDS | 35.0% | |
! | ATTTTATTCGGCGTCAAGAA+AGG | + | chr6.4:14576038-14576057 | MS.gene85823:CDS | 35.0% |
! | CATTTGCAAATCCAGTTTTC+CGG | - | chr6.4:14575802-14575821 | None:intergenic | 35.0% |
! | CTAGCAAACTTTTACATTCC+CGG | - | chr6.4:14577714-14577733 | None:intergenic | 35.0% |
! | CTTTGTGTGCTGAGTTTTTA+TGG | + | chr6.4:14575184-14575203 | MS.gene85823:intron | 35.0% |
! | GCTCCTCAACAATTGTATTT+TGG | + | chr6.4:14577351-14577370 | MS.gene85823:CDS | 35.0% |
! | GTTAGTGTTGTTATCAGATG+CGG | + | chr6.4:14575064-14575083 | MS.gene85823:intron | 35.0% |
! | GTTTTTATGGTGTTTCACTG+AGG | + | chr6.4:14575197-14575216 | MS.gene85823:intron | 35.0% |
! | TGTGCCATTGAAAAATTGGA+TGG | + | chr6.4:14575980-14575999 | MS.gene85823:CDS | 35.0% |
! | TTGGCTATATAGTGGAGTAT+GGG | + | chr6.4:14575158-14575177 | MS.gene85823:intron | 35.0% |
! | TTGTTGGTTGAACAGATGTT+GGG | + | chr6.4:14577866-14577885 | MS.gene85823:intron | 35.0% |
! | TTTGGCTATATAGTGGAGTA+TGG | + | chr6.4:14575157-14575176 | MS.gene85823:intron | 35.0% |
! | TTTGTTGGTTGAACAGATGT+TGG | + | chr6.4:14577865-14577884 | MS.gene85823:intron | 35.0% |
!! | ATTGAAGATGAAAGTGTCTG+AGG | + | chr6.4:14578009-14578028 | MS.gene85823:CDS | 35.0% |
!! | CATGCCATCCAATTTTTCAA+TGG | - | chr6.4:14575987-14576006 | None:intergenic | 35.0% |
!! | GAAGGTTTTATATGTGGGAA+GGG | + | chr6.4:14576291-14576310 | MS.gene85823:CDS | 35.0% |
!! | GATGGGAAGGTTTTATATGT+GGG | + | chr6.4:14576286-14576305 | MS.gene85823:CDS | 35.0% |
!! | TGATGGGAAGGTTTTATATG+TGG | + | chr6.4:14576285-14576304 | MS.gene85823:CDS | 35.0% |
AACTGTACTTTCTTGCAAGG+TGG | + | chr6.4:14575889-14575908 | MS.gene85823:CDS | 40.0% | |
AATGGCACTACAACCAATGA+TGG | + | chr6.4:14576268-14576287 | MS.gene85823:CDS | 40.0% | |
AATTACTCCAATGCTCGTGA+TGG | + | chr6.4:14574608-14574627 | MS.gene85823:CDS | 40.0% | |
AATTGTTGAGGAGCAAGTCT+TGG | - | chr6.4:14577345-14577364 | None:intergenic | 40.0% | |
AGGGTTTAGATGTAATGGTC+GGG | + | chr6.4:14577678-14577697 | MS.gene85823:CDS | 40.0% | |
AGTCCTTCGCTTAGTTTCAT+TGG | + | chr6.4:14578039-14578058 | MS.gene85823:CDS | 40.0% | |
ATGGCACTACAACCAATGAT+GGG | + | chr6.4:14576269-14576288 | MS.gene85823:CDS | 40.0% | |
CAACAACATTCCAATCACCT+TGG | - | chr6.4:14577942-14577961 | None:intergenic | 40.0% | |
CAAGGTGATTGGAATGTTGT+TGG | + | chr6.4:14577940-14577959 | MS.gene85823:CDS | 40.0% | |
CATCGGTATCTGTTTCCAAA+AGG | - | chr6.4:14576108-14576127 | None:intergenic | 40.0% | |
CTAGCAATTCTTGCAGGAAA+AGG | - | chr6.4:14577306-14577325 | None:intergenic | 40.0% | |
CTTCAGGTGACTTAATCAGA+TGG | - | chr6.4:14577988-14578007 | None:intergenic | 40.0% | |
CTTTATGTTGGGGATCTTGA+AGG | + | chr6.4:14574473-14574492 | MS.gene85823:CDS | 40.0% | |
GACCAAGGGTTTAGATGTAA+TGG | + | chr6.4:14577673-14577692 | MS.gene85823:CDS | 40.0% | |
GACCATTACATCTAAACCCT+TGG | - | chr6.4:14577678-14577697 | None:intergenic | 40.0% | |
GCAACACTAGATTGCATATC+TGG | - | chr6.4:14577441-14577460 | None:intergenic | 40.0% | |
GGAATGAGCGGAAAGATAAT+TGG | + | chr6.4:14576842-14576861 | MS.gene85823:CDS | 40.0% | |
GGAGGTTAAAGAACTTGTAG+AGG | + | chr6.4:14574894-14574913 | MS.gene85823:intron | 40.0% | |
GGCTCAAAGGAAATGTGAAA+GGG | + | chr6.4:14576312-14576331 | MS.gene85823:CDS | 40.0% | |
GTATGAGTAGATAGTGTAGG+CGG | + | chr6.4:14575007-14575026 | MS.gene85823:intron | 40.0% | |
GTCCTTCGCTTAGTTTCATT+GGG | + | chr6.4:14578040-14578059 | MS.gene85823:CDS | 40.0% | |
GTCGAAGAACACTATAAAGG+AGG | + | chr6.4:14574876-14574895 | MS.gene85823:intron | 40.0% | |
TATTGTTGAACGGAACTGGA+CGG | + | chr6.4:14574435-14574454 | MS.gene85823:CDS | 40.0% | |
TCTCAAATCAATGCTTCGGT+TGG | + | chr6.4:14577273-14577292 | MS.gene85823:CDS | 40.0% | |
TGATCTCTAGCAATTCTTGC+AGG | - | chr6.4:14577312-14577331 | None:intergenic | 40.0% | |
TGCGTCGAAGAACACTATAA+AGG | + | chr6.4:14574873-14574892 | MS.gene85823:intron | 40.0% | |
TGGAACTGTACTTTCTTGCA+AGG | + | chr6.4:14575886-14575905 | MS.gene85823:CDS | 40.0% | |
TGGTATGGCAGGATGTAATT+TGG | - | chr6.4:14577465-14577484 | None:intergenic | 40.0% | |
TGTTGTTATCAGATGCGGAA+GGG | + | chr6.4:14575069-14575088 | MS.gene85823:intron | 40.0% | |
TGTTTCATCACCTAAGACAG+CGG | + | chr6.4:14574403-14574422 | MS.gene85823:CDS | 40.0% | |
! | ACTGTTCAATCAGATTGGTC+AGG | + | chr6.4:14574523-14574542 | MS.gene85823:CDS | 40.0% |
! | ACTTGTTGGAAGTTTCCAAC+CGG | - | chr6.4:14577531-14577550 | None:intergenic | 40.0% |
! | GGTCTGATGGTTGGTTATTT+AGG | + | chr6.4:14575093-14575112 | MS.gene85823:intron | 40.0% |
! | TGGCTATATAGTGGAGTATG+GGG | + | chr6.4:14575159-14575178 | MS.gene85823:intron | 40.0% |
! | TGGTCAGGTTGTTTCAATCA+GGG | + | chr6.4:14574538-14574557 | MS.gene85823:CDS | 40.0% |
! | TTGGTCAGGTTGTTTCAATC+AGG | + | chr6.4:14574537-14574556 | MS.gene85823:CDS | 40.0% |
!! | GGAAGGTTTTATATGTGGGA+AGG | + | chr6.4:14576290-14576309 | MS.gene85823:CDS | 40.0% |
!! | GTAGGCGGTAGATTGTTTTT+AGG | + | chr6.4:14575022-14575041 | MS.gene85823:intron | 40.0% |
!!! | ACGTTGATTTTCCCTTGAAG+TGG | + | chr6.4:14577010-14577029 | MS.gene85823:intron | 40.0% |
!!! | ACTGAGGTTTTGTTCTCTTG+TGG | + | chr6.4:14575213-14575232 | MS.gene85823:intron | 40.0% |
!!! | CGTTGATTTTCCCTTGAAGT+GGG | + | chr6.4:14577011-14577030 | MS.gene85823:intron | 40.0% |
!!! | CTGAGGTTTTGTTCTCTTGT+GGG | + | chr6.4:14575214-14575233 | MS.gene85823:intron | 40.0% |
!!! | TGAGGTTTTGTTCTCTTGTG+GGG | + | chr6.4:14575215-14575234 | MS.gene85823:intron | 40.0% |
AATCAGACAGCCAAGGTGAT+TGG | + | chr6.4:14577929-14577948 | MS.gene85823:CDS | 45.0% | |
ACACTAACCATCACGAGCAT+TGG | - | chr6.4:14574618-14574637 | None:intergenic | 45.0% | |
ACCAAACAATCAGACAGCCA+AGG | + | chr6.4:14577922-14577941 | MS.gene85823:CDS | 45.0% | |
ACCTTGGCTGTCTGATTGTT+TGG | - | chr6.4:14577926-14577945 | None:intergenic | 45.0% | |
AGATAGGAAAGCTCGTTTGC+AGG | + | chr6.4:14576904-14576923 | MS.gene85823:CDS | 45.0% | |
ATGGTCGGGAAAATCAACAC+CGG | + | chr6.4:14577692-14577711 | MS.gene85823:CDS | 45.0% | |
ATGTCTCACAAGGCTGAATG+TGG | + | chr6.4:14574942-14574961 | MS.gene85823:intron | 45.0% | |
CAGGTAATGCTTGATACCCA+TGG | + | chr6.4:14576659-14576678 | MS.gene85823:intron | 45.0% | |
CGTCAAGAAAGGTCGGAAAA+TGG | + | chr6.4:14576049-14576068 | MS.gene85823:CDS | 45.0% | |
GACCCAATGAAACTAAGCGA+AGG | - | chr6.4:14578045-14578064 | None:intergenic | 45.0% | |
GCATGTGAGTGAATACTCCA+TGG | + | chr6.4:14576579-14576598 | MS.gene85823:intron | 45.0% | |
GCTGCAGTTGAGAAGTTGAA+TGG | + | chr6.4:14576250-14576269 | MS.gene85823:CDS | 45.0% | |
GCTGTATTGTTGAACGGAAC+TGG | + | chr6.4:14574431-14574450 | MS.gene85823:CDS | 45.0% | |
GGGCTCAAAGGAAATGTGAA+AGG | + | chr6.4:14576311-14576330 | MS.gene85823:CDS | 45.0% | |
GTTCCGGCTGTATTGTTGAA+CGG | + | chr6.4:14574425-14574444 | MS.gene85823:CDS | 45.0% | |
GTTCCGTTCAACAATACAGC+CGG | - | chr6.4:14574431-14574450 | None:intergenic | 45.0% | |
GTTGGAATTGGACAAGTCAG+AGG | + | chr6.4:14577958-14577977 | MS.gene85823:CDS | 45.0% | |
GTTGTTATCAGATGCGGAAG+GGG | + | chr6.4:14575070-14575089 | MS.gene85823:intron | 45.0% | |
TATATGTGGGAAGGGCTCAA+AGG | + | chr6.4:14576299-14576318 | MS.gene85823:CDS | 45.0% | |
TATCCGTATCCAGTTGGTTG+AGG | - | chr6.4:14577402-14577421 | None:intergenic | 45.0% | |
TATTCGGCGTCAAGAAAGGT+CGG | + | chr6.4:14576042-14576061 | MS.gene85823:CDS | 45.0% | |
TTGTTATCAGATGCGGAAGG+GGG | + | chr6.4:14575071-14575090 | MS.gene85823:intron | 45.0% | |
! | AAGGTGGCTCTTGATAGCAA+TGG | + | chr6.4:14575905-14575924 | MS.gene85823:CDS | 45.0% |
! | AATCCAGTTTTCCGGATGGT+AGG | - | chr6.4:14575794-14575813 | None:intergenic | 45.0% |
! | CACTACAACCAATGATGGGA+AGG | + | chr6.4:14576273-14576292 | MS.gene85823:CDS | 45.0% |
! | GGCTATATAGTGGAGTATGG+GGG | + | chr6.4:14575160-14575179 | MS.gene85823:intron | 45.0% |
! | GTGTTGTTATCAGATGCGGA+AGG | + | chr6.4:14575068-14575087 | MS.gene85823:intron | 45.0% |
! | TGCAAATCCAGTTTTCCGGA+TGG | - | chr6.4:14575798-14575817 | None:intergenic | 45.0% |
! | TTTTGTTCTCTTGTGGGGTC+TGG | + | chr6.4:14575220-14575239 | MS.gene85823:intron | 45.0% |
!! | AGGAAGTAAAGGTGTTACCG+TGG | + | chr6.4:14574914-14574933 | MS.gene85823:intron | 45.0% |
!! | ATAGCTTGCTGCACTAGTTC+GGG | - | chr6.4:14575366-14575385 | None:intergenic | 45.0% |
!! | CATAGCTTGCTGCACTAGTT+CGG | - | chr6.4:14575367-14575386 | None:intergenic | 45.0% |
!! | GATGAAAGTGTCTGAGGCAA+TGG | + | chr6.4:14578015-14578034 | MS.gene85823:CDS | 45.0% |
!! | TCTGGTATTGGTTGCTGCTT+CGG | + | chr6.4:14575238-14575257 | MS.gene85823:intron | 45.0% |
ACAGCTTTACTCGCTTCCTC+TGG | - | chr6.4:14576722-14576741 | None:intergenic | 50.0% | |
ATCACCTAAGACAGCGGTTC+CGG | + | chr6.4:14574409-14574428 | MS.gene85823:CDS | 50.0% | |
CAAAACCGAAGCCCTTGCTA+TGG | - | chr6.4:14576685-14576704 | None:intergenic | 50.0% | |
CCAACAAGTTCAACAGACCC+AGG | + | chr6.4:14577542-14577561 | MS.gene85823:CDS | 50.0% | |
CCTGGGTCTGTTGAACTTGT+TGG | - | chr6.4:14577545-14577564 | None:intergenic | 50.0% | |
CTCATCGTGATCCTACCATC+CGG | + | chr6.4:14575780-14575799 | MS.gene85823:CDS | 50.0% | |
CTTGTGAGACATCGTCTCCA+CGG | - | chr6.4:14574934-14574953 | None:intergenic | 50.0% | |
GATACCCATGGCCATAGCAA+GGG | + | chr6.4:14576671-14576690 | MS.gene85823:CDS | 50.0% | |
GATCCTACCATCCGGAAAAC+TGG | + | chr6.4:14575788-14575807 | MS.gene85823:CDS | 50.0% | |
GGTGTAAGATGACCCACAAG+AGG | - | chr6.4:14577905-14577924 | None:intergenic | 50.0% | |
TACCTCGCAACTCAGACCAA+GGG | + | chr6.4:14577659-14577678 | MS.gene85823:CDS | 50.0% | |
TCTCTTGTGGGGTCTGGTAT+TGG | + | chr6.4:14575226-14575245 | MS.gene85823:intron | 50.0% | |
TCTTGAAGGGAAGGTGAACG+AGG | + | chr6.4:14574487-14574506 | MS.gene85823:CDS | 50.0% | |
TGATACCCATGGCCATAGCA+AGG | + | chr6.4:14576670-14576689 | MS.gene85823:CDS | 50.0% | |
TGCTGGTATCCGTATCCAGT+TGG | - | chr6.4:14577408-14577427 | None:intergenic | 50.0% | |
TGGCTCAGCGCAAAGAAGAT+AGG | + | chr6.4:14576888-14576907 | MS.gene85823:CDS | 50.0% | |
TGGTCGGGAAAATCAACACC+GGG | + | chr6.4:14577693-14577712 | MS.gene85823:CDS | 50.0% | |
TGTTATCAGATGCGGAAGGG+GGG | + | chr6.4:14575072-14575091 | MS.gene85823:intron | 50.0% | |
TGTTGGGGATCTTGAAGGGA+AGG | + | chr6.4:14574478-14574497 | MS.gene85823:CDS | 50.0% | |
TTGCATGCTACACACGACCA+TGG | - | chr6.4:14576599-14576618 | None:intergenic | 50.0% | |
! | CGAATTGGCTTCCCATGCAA+AGG | - | chr6.4:14575749-14575768 | None:intergenic | 50.0% |
! | TGTTGCCTTTTCCACTCCAG+AGG | + | chr6.4:14576703-14576722 | MS.gene85823:CDS | 50.0% |
! | TTTACTCGCTTCCTCTGGAG+TGG | - | chr6.4:14576717-14576736 | None:intergenic | 50.0% |
!! | CTGGTATTGGTTGCTGCTTC+GGG | + | chr6.4:14575239-14575258 | MS.gene85823:intron | 50.0% |
!! | TGGTATTGGTTGCTGCTTCG+GGG | + | chr6.4:14575240-14575259 | MS.gene85823:intron | 50.0% |
AACCCTTGGTCTGAGTTGCG+AGG | - | chr6.4:14577664-14577683 | None:intergenic | 55.0% | |
CAGATGACGCAGTCGTCTCT+TGG | + | chr6.4:14574572-14574591 | MS.gene85823:CDS | 55.0% | |
CATGGCCATAGCAAGGGCTT+CGG | + | chr6.4:14576677-14576696 | MS.gene85823:CDS | 55.0% | |
CCATACCACCTTCAGAGGCA+CGG | + | chr6.4:14577477-14577496 | MS.gene85823:CDS | 55.0% | |
CCGCCTCAACCAACTGGATA+CGG | + | chr6.4:14577396-14577415 | MS.gene85823:CDS | 55.0% | |
CCGTATCCAGTTGGTTGAGG+CGG | - | chr6.4:14577399-14577418 | None:intergenic | 55.0% | |
CGTGGAGACGATGTCTCACA+AGG | + | chr6.4:14574932-14574951 | MS.gene85823:intron | 55.0% | |
CTACCTCGCAACTCAGACCA+AGG | + | chr6.4:14577658-14577677 | MS.gene85823:CDS | 55.0% | |
GGTCATCCTGGACATGGGAT+GGG | + | chr6.4:14577498-14577517 | MS.gene85823:CDS | 55.0% | |
TCCTGCCATACCACCTTCAG+AGG | + | chr6.4:14577472-14577491 | MS.gene85823:CDS | 55.0% | |
! | GAAGCCCTTGCTATGGCCAT+GGG | - | chr6.4:14576678-14576697 | None:intergenic | 55.0% |
!! | CGCTTCCTCTGGAGTGGAAA+AGG | - | chr6.4:14576711-14576730 | None:intergenic | 55.0% |
ACAGCCGGAACCGCTGTCTT+AGG | - | chr6.4:14574416-14574435 | None:intergenic | 60.0% | |
ACATGGGATGGGTGTGCGTC+CGG | + | chr6.4:14577509-14577528 | MS.gene85823:CDS | 60.0% | |
AGGCACGGTCATCCTGGACA+TGG | + | chr6.4:14577492-14577511 | MS.gene85823:CDS | 60.0% | |
CAGGATGACCGTGCCTCTGA+AGG | - | chr6.4:14577488-14577507 | None:intergenic | 60.0% | |
CGGTCATCCTGGACATGGGA+TGG | + | chr6.4:14577497-14577516 | MS.gene85823:CDS | 60.0% | |
CTGATGCCGCCTCAACCAAC+TGG | + | chr6.4:14577390-14577409 | MS.gene85823:CDS | 60.0% | |
GGCACGGTCATCCTGGACAT+GGG | + | chr6.4:14577493-14577512 | MS.gene85823:CDS | 60.0% | |
! | CCGTGCCTCTGAAGGTGGTA+TGG | - | chr6.4:14577480-14577499 | None:intergenic | 60.0% |
! | CGAAGCCCTTGCTATGGCCA+TGG | - | chr6.4:14576679-14576698 | None:intergenic | 60.0% |
! | CTTCAGAGGCACGGTCATCC+TGG | + | chr6.4:14577486-14577505 | MS.gene85823:CDS | 60.0% |
! | GATGACCGTGCCTCTGAAGG+TGG | - | chr6.4:14577485-14577504 | None:intergenic | 60.0% |
! | GCCTCTGAAGGTGGTATGGC+AGG | - | chr6.4:14577476-14577495 | None:intergenic | 60.0% |
CGCACACCCATCCCATGTCC+AGG | - | chr6.4:14577507-14577526 | None:intergenic | 65.0% | |
CGGAAGGGGGGTCTGATGGT+TGG | + | chr6.4:14575084-14575103 | MS.gene85823:intron | 65.0% | |
GATGCGGAAGGGGGGTCTGA+TGG | + | chr6.4:14575080-14575099 | MS.gene85823:intron | 65.0% | |
GGTTGAGGCGGCATCAGACG+AGG | - | chr6.4:14577387-14577406 | None:intergenic | 65.0% | |
GGGATGGGTGTGCGTCCGGT+TGG | + | chr6.4:14577513-14577532 | MS.gene85823:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 14574395 | 14578078 | 14574395 | ID=MS.gene85823 |
chr6.4 | mRNA | 14574395 | 14578078 | 14574395 | ID=MS.gene85823.t1;Parent=MS.gene85823 |
chr6.4 | exon | 14574395 | 14574629 | 14574395 | ID=MS.gene85823.t1.exon1;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14574395 | 14574629 | 14574395 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14575714 | 14576489 | 14575714 | ID=MS.gene85823.t1.exon2;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14575714 | 14576489 | 14575714 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14576662 | 14576739 | 14576662 | ID=MS.gene85823.t1.exon3;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14576662 | 14576739 | 14576662 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14576836 | 14576925 | 14576836 | ID=MS.gene85823.t1.exon4;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14576836 | 14576925 | 14576836 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14577264 | 14577563 | 14577264 | ID=MS.gene85823.t1.exon5;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14577264 | 14577563 | 14577264 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14577655 | 14577780 | 14577655 | ID=MS.gene85823.t1.exon6;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14577655 | 14577780 | 14577655 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
chr6.4 | exon | 14577881 | 14578078 | 14577881 | ID=MS.gene85823.t1.exon7;Parent=MS.gene85823.t1 |
chr6.4 | CDS | 14577881 | 14578078 | 14577881 | ID=cds.MS.gene85823.t1;Parent=MS.gene85823.t1 |
Gene Sequence |
Protein sequence |