Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050419.t1 | XP_003625997.2 | 98.5 | 591 | 9 | 0 | 1 | 591 | 55 | 645 | 0.00E+00 | 1207.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050419.t1 | O22898 | 68.9 | 591 | 184 | 0 | 1 | 591 | 55 | 645 | 2.9e-254 | 879.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050419.t1 | G7KTN5 | 98.5 | 591 | 9 | 0 | 1 | 591 | 55 | 645 | 0.0e+00 | 1207.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050418 | MS.gene050419 | 0.977531 | 5.73E-144 | -1.69E-46 |
| MS.gene050419 | MS.gene07077 | 0.975556 | 3.61E-140 | -1.69E-46 |
| MS.gene050419 | MS.gene07078 | 0.958465 | 2.20E-116 | -1.69E-46 |
| MS.gene050419 | MS.gene07080 | 0.980872 | 3.11E-151 | -1.69E-46 |
| MS.gene050419 | MS.gene072680 | 0.883852 | 3.16E-71 | -1.69E-46 |
| MS.gene050419 | MS.gene28831 | 0.971137 | 1.08E-132 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050419.t1 | MTR_7g109830 | 98.477 | 591 | 9 | 0 | 1 | 591 | 55 | 645 | 0.0 | 1217 |
| MS.gene050419.t1 | MTR_1g086600 | 78.114 | 594 | 126 | 2 | 1 | 591 | 77 | 669 | 0.0 | 980 |
| MS.gene050419.t1 | MTR_5g009350 | 53.130 | 591 | 277 | 0 | 1 | 591 | 57 | 647 | 0.0 | 644 |
| MS.gene050419.t1 | MTR_5g009350 | 53.130 | 591 | 277 | 0 | 1 | 591 | 57 | 647 | 0.0 | 644 |
| MS.gene050419.t1 | MTR_8g099420 | 52.115 | 591 | 283 | 0 | 1 | 591 | 58 | 648 | 0.0 | 642 |
| MS.gene050419.t1 | MTR_5g009360 | 52.453 | 591 | 281 | 0 | 1 | 591 | 57 | 647 | 0.0 | 632 |
| MS.gene050419.t1 | MTR_1g034360 | 49.153 | 590 | 299 | 1 | 2 | 591 | 58 | 646 | 0.0 | 596 |
| MS.gene050419.t1 | MTR_4g068670 | 48.393 | 591 | 301 | 3 | 2 | 591 | 57 | 644 | 0.0 | 590 |
| MS.gene050419.t1 | MTR_5g009350 | 50.864 | 521 | 254 | 1 | 1 | 519 | 57 | 577 | 0.0 | 538 |
| MS.gene050419.t1 | MTR_5g009350 | 52.965 | 489 | 230 | 0 | 1 | 489 | 57 | 545 | 0.0 | 535 |
| MS.gene050419.t1 | MTR_5g009360 | 51.468 | 511 | 248 | 0 | 81 | 591 | 11 | 521 | 0.0 | 528 |
| MS.gene050419.t1 | MTR_1g104810 | 40.000 | 590 | 339 | 8 | 5 | 590 | 31 | 609 | 9.28e-131 | 397 |
| MS.gene050419.t1 | MTR_1g104810 | 40.000 | 590 | 339 | 8 | 5 | 590 | 98 | 676 | 4.19e-130 | 397 |
| MS.gene050419.t1 | MTR_1g030290 | 33.442 | 613 | 361 | 13 | 8 | 591 | 93 | 687 | 1.26e-97 | 313 |
| MS.gene050419.t1 | MTR_3g087980 | 33.169 | 609 | 364 | 12 | 10 | 591 | 93 | 685 | 3.01e-95 | 306 |
| MS.gene050419.t1 | MTR_3g082660 | 32.154 | 622 | 378 | 14 | 1 | 586 | 101 | 714 | 6.17e-89 | 290 |
| MS.gene050419.t1 | MTR_3g084450 | 27.229 | 628 | 374 | 19 | 24 | 591 | 108 | 712 | 1.84e-50 | 186 |
| MS.gene050419.t1 | MTR_3g084470 | 26.794 | 627 | 375 | 18 | 24 | 591 | 106 | 707 | 2.03e-47 | 177 |
| MS.gene050419.t1 | MTR_8g083170 | 26.190 | 630 | 380 | 19 | 24 | 591 | 110 | 716 | 2.91e-47 | 177 |
| MS.gene050419.t1 | MTR_3g084450 | 30.277 | 469 | 265 | 15 | 167 | 591 | 54 | 504 | 3.44e-43 | 162 |
| MS.gene050419.t1 | MTR_1g063110 | 26.650 | 394 | 231 | 13 | 134 | 515 | 155 | 502 | 3.29e-24 | 107 |
| MS.gene050419.t1 | MTR_5g007640 | 27.178 | 482 | 274 | 18 | 24 | 493 | 98 | 514 | 4.39e-24 | 107 |
| MS.gene050419.t1 | MTR_5g008820 | 22.718 | 493 | 295 | 14 | 24 | 495 | 41 | 468 | 1.59e-22 | 102 |
| MS.gene050419.t1 | MTR_8g074120 | 25.670 | 448 | 253 | 18 | 69 | 492 | 40 | 431 | 1.46e-21 | 99.0 |
| MS.gene050419.t1 | MTR_8g074040 | 22.951 | 488 | 290 | 14 | 24 | 488 | 83 | 507 | 2.80e-21 | 98.6 |
| MS.gene050419.t1 | MTR_4g128337 | 27.146 | 501 | 271 | 20 | 12 | 493 | 50 | 475 | 6.65e-21 | 97.1 |
| MS.gene050419.t1 | MTR_1569s0010 | 24.427 | 524 | 303 | 19 | 24 | 513 | 23 | 487 | 8.60e-21 | 96.7 |
| MS.gene050419.t1 | MTR_4g057730 | 27.844 | 334 | 181 | 14 | 167 | 493 | 189 | 469 | 9.78e-21 | 95.9 |
| MS.gene050419.t1 | MTR_4g057730 | 27.844 | 334 | 181 | 14 | 167 | 493 | 189 | 469 | 1.68e-20 | 95.5 |
| MS.gene050419.t1 | MTR_2g095510 | 28.097 | 331 | 176 | 14 | 145 | 466 | 163 | 440 | 2.73e-20 | 94.4 |
| MS.gene050419.t1 | MTR_2g095510 | 28.090 | 356 | 197 | 15 | 145 | 493 | 163 | 466 | 3.33e-20 | 94.7 |
| MS.gene050419.t1 | MTR_5g008800 | 23.625 | 491 | 295 | 13 | 24 | 495 | 41 | 470 | 6.20e-20 | 94.0 |
| MS.gene050419.t1 | MTR_1g063120 | 24.221 | 578 | 345 | 21 | 12 | 575 | 47 | 545 | 1.05e-19 | 93.2 |
| MS.gene050419.t1 | MTR_4g121600 | 24.096 | 498 | 278 | 16 | 24 | 488 | 47 | 477 | 1.60e-19 | 92.8 |
| MS.gene050419.t1 | MTR_4g057730 | 28.013 | 307 | 162 | 13 | 167 | 466 | 189 | 443 | 1.65e-19 | 92.0 |
| MS.gene050419.t1 | MTR_4g077900 | 26.022 | 465 | 278 | 16 | 35 | 493 | 1 | 405 | 1.69e-19 | 92.0 |
| MS.gene050419.t1 | MTR_4g011790 | 24.854 | 515 | 315 | 18 | 24 | 515 | 89 | 554 | 3.66e-19 | 91.7 |
| MS.gene050419.t1 | MTR_3g460770 | 26.190 | 504 | 268 | 23 | 12 | 493 | 47 | 468 | 3.84e-19 | 91.7 |
| MS.gene050419.t1 | MTR_8g074040 | 23.928 | 443 | 250 | 15 | 69 | 488 | 11 | 389 | 7.90e-19 | 90.1 |
| MS.gene050419.t1 | MTR_1g090737 | 28.818 | 347 | 172 | 15 | 162 | 493 | 207 | 493 | 1.87e-18 | 89.4 |
| MS.gene050419.t1 | MTR_4g013210 | 23.669 | 507 | 323 | 18 | 24 | 515 | 83 | 540 | 2.42e-17 | 85.9 |
| MS.gene050419.t1 | MTR_2g044180 | 23.566 | 488 | 296 | 15 | 24 | 489 | 47 | 479 | 4.18e-17 | 85.1 |
| MS.gene050419.t1 | MTR_5g027480 | 27.434 | 339 | 190 | 12 | 164 | 495 | 195 | 484 | 2.67e-16 | 82.4 |
| MS.gene050419.t1 | MTR_5g027500 | 24.444 | 495 | 305 | 13 | 32 | 515 | 78 | 514 | 2.81e-16 | 82.4 |
| MS.gene050419.t1 | MTR_2g105570 | 35.503 | 169 | 100 | 7 | 331 | 493 | 310 | 475 | 3.24e-16 | 82.4 |
| MS.gene050419.t1 | MTR_1g026310 | 35.366 | 164 | 98 | 6 | 334 | 493 | 328 | 487 | 6.93e-16 | 81.3 |
| MS.gene050419.t1 | MTR_4g013210 | 26.257 | 358 | 220 | 14 | 165 | 515 | 68 | 388 | 1.02e-15 | 80.1 |
| MS.gene050419.t1 | MTR_8g039720 | 25.826 | 333 | 191 | 13 | 167 | 493 | 208 | 490 | 6.20e-15 | 78.2 |
| MS.gene050419.t1 | MTR_2g044180 | 23.898 | 431 | 251 | 15 | 81 | 489 | 13 | 388 | 9.63e-15 | 77.4 |
| MS.gene050419.t1 | MTR_4g005750 | 37.870 | 169 | 96 | 6 | 331 | 493 | 303 | 468 | 1.49e-14 | 77.0 |
| MS.gene050419.t1 | MTR_4g013210 | 22.727 | 506 | 288 | 17 | 24 | 515 | 83 | 499 | 3.89e-14 | 75.9 |
| MS.gene050419.t1 | MTR_3g064420 | 30.374 | 214 | 135 | 6 | 286 | 488 | 259 | 469 | 4.26e-14 | 75.9 |
| MS.gene050419.t1 | MTR_3g035130 | 22.222 | 522 | 305 | 19 | 1 | 511 | 18 | 449 | 6.00e-14 | 74.7 |
| MS.gene050419.t1 | MTR_3g035130 | 22.222 | 522 | 305 | 19 | 1 | 511 | 18 | 449 | 7.70e-14 | 74.7 |
| MS.gene050419.t1 | MTR_1g073180 | 33.333 | 165 | 105 | 5 | 331 | 493 | 300 | 461 | 1.07e-13 | 74.3 |
| MS.gene050419.t1 | MTR_1g073180 | 33.333 | 165 | 105 | 5 | 331 | 493 | 322 | 483 | 1.08e-13 | 74.3 |
| MS.gene050419.t1 | MTR_5g023730 | 28.061 | 196 | 129 | 4 | 309 | 495 | 280 | 472 | 3.24e-13 | 72.8 |
| MS.gene050419.t1 | MTR_4g013210 | 24.462 | 372 | 200 | 12 | 165 | 531 | 68 | 363 | 1.23e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050419.t1 | AT2G47240 | 68.866 | 591 | 184 | 0 | 1 | 591 | 55 | 645 | 0.0 | 883 |
| MS.gene050419.t1 | AT2G47240 | 68.866 | 591 | 184 | 0 | 1 | 591 | 55 | 645 | 0.0 | 883 |
| MS.gene050419.t1 | AT2G47240 | 68.866 | 591 | 184 | 0 | 1 | 591 | 55 | 645 | 0.0 | 883 |
| MS.gene050419.t1 | AT2G47240 | 69.113 | 586 | 181 | 0 | 6 | 591 | 1 | 586 | 0.0 | 876 |
| MS.gene050419.t1 | AT4G23850 | 51.438 | 591 | 287 | 0 | 1 | 591 | 58 | 648 | 0.0 | 652 |
| MS.gene050419.t1 | AT4G11030 | 51.777 | 591 | 285 | 0 | 1 | 591 | 58 | 648 | 0.0 | 639 |
| MS.gene050419.t1 | AT1G64400 | 50.339 | 590 | 293 | 0 | 2 | 591 | 59 | 648 | 0.0 | 625 |
| MS.gene050419.t1 | AT1G49430 | 47.386 | 593 | 310 | 2 | 1 | 591 | 58 | 650 | 0.0 | 572 |
| MS.gene050419.t1 | AT1G49430 | 45.514 | 457 | 248 | 1 | 1 | 456 | 58 | 514 | 4.52e-141 | 419 |
| MS.gene050419.t1 | AT5G27600 | 40.304 | 593 | 341 | 7 | 1 | 590 | 97 | 679 | 3.66e-138 | 418 |
| MS.gene050419.t1 | AT3G05970 | 41.864 | 590 | 328 | 8 | 5 | 590 | 101 | 679 | 1.51e-135 | 411 |
| MS.gene050419.t1 | AT2G04350 | 31.638 | 629 | 382 | 13 | 1 | 591 | 94 | 712 | 2.31e-93 | 302 |
| MS.gene050419.t1 | AT2G04350 | 31.638 | 629 | 382 | 13 | 1 | 591 | 94 | 712 | 2.31e-93 | 302 |
| MS.gene050419.t1 | AT1G77590 | 31.509 | 603 | 365 | 13 | 17 | 591 | 101 | 683 | 5.15e-93 | 300 |
| MS.gene050419.t1 | AT1G77590 | 32.432 | 555 | 327 | 13 | 65 | 591 | 3 | 537 | 1.65e-86 | 279 |
| MS.gene050419.t1 | AT3G23790 | 27.040 | 625 | 377 | 18 | 24 | 591 | 112 | 714 | 4.17e-47 | 176 |
| MS.gene050419.t1 | AT4G14070 | 26.485 | 623 | 372 | 18 | 24 | 591 | 128 | 719 | 4.31e-45 | 171 |
| MS.gene050419.t1 | AT1G66120 | 24.951 | 513 | 283 | 14 | 24 | 508 | 41 | 479 | 1.11e-25 | 112 |
| MS.gene050419.t1 | AT3G16910 | 25.263 | 570 | 324 | 20 | 24 | 567 | 49 | 542 | 1.45e-24 | 108 |
| MS.gene050419.t1 | AT1G65890 | 24.561 | 513 | 285 | 15 | 24 | 508 | 41 | 479 | 7.32e-24 | 106 |
| MS.gene050419.t1 | AT1G21530 | 24.449 | 499 | 290 | 16 | 24 | 499 | 42 | 476 | 6.63e-23 | 103 |
| MS.gene050419.t1 | AT1G20560 | 25.051 | 487 | 293 | 15 | 24 | 493 | 43 | 474 | 1.62e-22 | 102 |
| MS.gene050419.t1 | AT1G65880 | 24.846 | 487 | 271 | 14 | 24 | 481 | 41 | 461 | 1.76e-22 | 102 |
| MS.gene050419.t1 | AT4G19010 | 28.000 | 425 | 230 | 17 | 114 | 513 | 139 | 512 | 1.83e-22 | 102 |
| MS.gene050419.t1 | AT1G21530 | 24.850 | 499 | 286 | 17 | 24 | 499 | 42 | 474 | 6.86e-22 | 100 |
| MS.gene050419.t1 | AT1G21540 | 24.699 | 498 | 293 | 17 | 24 | 499 | 42 | 479 | 5.36e-21 | 97.4 |
| MS.gene050419.t1 | AT1G77240 | 23.353 | 501 | 295 | 15 | 24 | 499 | 41 | 477 | 7.78e-21 | 96.7 |
| MS.gene050419.t1 | AT5G16340 | 25.152 | 493 | 296 | 17 | 17 | 493 | 35 | 470 | 8.30e-20 | 93.6 |
| MS.gene050419.t1 | AT1G65060 | 25.000 | 464 | 252 | 17 | 24 | 466 | 77 | 465 | 8.80e-20 | 93.2 |
| MS.gene050419.t1 | AT1G65060 | 25.000 | 464 | 252 | 17 | 24 | 466 | 77 | 465 | 1.16e-19 | 93.2 |
| MS.gene050419.t1 | AT3G21230 | 27.237 | 503 | 273 | 24 | 12 | 493 | 65 | 495 | 1.91e-19 | 92.4 |
| MS.gene050419.t1 | AT3G21230 | 30.588 | 340 | 179 | 17 | 160 | 493 | 207 | 495 | 2.59e-19 | 92.0 |
| MS.gene050419.t1 | AT3G21230 | 27.237 | 503 | 273 | 24 | 12 | 493 | 65 | 495 | 2.95e-19 | 91.7 |
| MS.gene050419.t1 | AT4G05160 | 28.375 | 363 | 197 | 15 | 164 | 515 | 188 | 498 | 3.30e-18 | 88.6 |
| MS.gene050419.t1 | AT1G20560 | 24.943 | 441 | 260 | 14 | 69 | 493 | 11 | 396 | 5.16e-18 | 87.8 |
| MS.gene050419.t1 | AT1G75960 | 24.248 | 499 | 293 | 18 | 17 | 493 | 35 | 470 | 7.07e-17 | 84.3 |
| MS.gene050419.t1 | AT1G20480 | 27.273 | 330 | 186 | 12 | 167 | 493 | 214 | 492 | 5.17e-16 | 81.6 |
| MS.gene050419.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 331 | 495 | 316 | 483 | 1.37e-15 | 80.5 |
| MS.gene050419.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 331 | 495 | 316 | 483 | 1.54e-15 | 80.1 |
| MS.gene050419.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 331 | 495 | 316 | 483 | 1.54e-15 | 80.1 |
| MS.gene050419.t1 | AT5G16370 | 34.682 | 173 | 96 | 7 | 334 | 493 | 302 | 470 | 5.91e-15 | 78.6 |
| MS.gene050419.t1 | AT1G20510 | 34.969 | 163 | 100 | 6 | 334 | 493 | 312 | 471 | 3.71e-14 | 75.9 |
| MS.gene050419.t1 | AT1G20510 | 34.969 | 163 | 100 | 6 | 334 | 493 | 312 | 471 | 3.87e-14 | 75.5 |
| MS.gene050419.t1 | AT1G68270 | 34.270 | 178 | 90 | 7 | 334 | 493 | 275 | 443 | 1.43e-13 | 73.9 |
| MS.gene050419.t1 | AT1G20510 | 36.765 | 136 | 81 | 5 | 334 | 466 | 312 | 445 | 2.17e-13 | 73.2 |
| MS.gene050419.t1 | AT2G47245 | 68.293 | 41 | 13 | 0 | 1 | 41 | 88 | 128 | 2.36e-13 | 67.8 |
| MS.gene050419.t1 | AT1G51680 | 33.333 | 219 | 134 | 8 | 331 | 540 | 323 | 538 | 2.49e-13 | 73.2 |
| MS.gene050419.t1 | AT1G62940 | 26.450 | 431 | 245 | 16 | 116 | 525 | 123 | 502 | 5.74e-13 | 72.0 |
| MS.gene050419.t1 | AT1G51680 | 36.257 | 171 | 100 | 7 | 331 | 495 | 323 | 490 | 1.97e-12 | 70.5 |
| MS.gene050419.t1 | AT1G51680 | 36.257 | 171 | 100 | 7 | 331 | 495 | 323 | 490 | 3.10e-12 | 69.7 |
| MS.gene050419.t1 | AT2G17650 | 32.353 | 170 | 80 | 6 | 334 | 481 | 360 | 516 | 1.80e-11 | 67.4 |
| MS.gene050419.t1 | AT3G48990 | 30.319 | 188 | 123 | 4 | 330 | 513 | 281 | 464 | 3.19e-11 | 66.6 |
Find 0 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAAAATTATTCATATTT+AGG | - | 51331:10323-10342 | MS.gene050419:intron | 10.0% |
| !!! | CTTTTTTATTTTTGTTAAAA+GGG | - | 51331:6654-6673 | MS.gene050419:intron | 10.0% |
| !!! | TCTTTTTTATTTTTGTTAAA+AGG | - | 51331:6653-6672 | MS.gene050419:intron | 10.0% |
| !! | AAGACAATAATAAATATATC+TGG | + | 51331:8313-8332 | MS.gene050419:intergenic | 15.0% |
| !! | ATTGTGTAATTTCAATTATA+GGG | - | 51331:6693-6712 | MS.gene050419:intron | 15.0% |
| !! | CTTCAAAATAAAGATATATT+TGG | - | 51331:9543-9562 | MS.gene050419:intron | 15.0% |
| !! | TATTGTGTAATTTCAATTAT+AGG | - | 51331:6692-6711 | MS.gene050419:intron | 15.0% |
| !!! | AAAACATTACTTATTTTGTT+AGG | - | 51331:8178-8197 | MS.gene050419:intron | 15.0% |
| !!! | AAACATTACTTATTTTGTTA+GGG | - | 51331:8179-8198 | MS.gene050419:intron | 15.0% |
| !!! | TAAAACAAATAAATTTTGTG+CGG | + | 51331:8760-8779 | MS.gene050419:intergenic | 15.0% |
| !!! | TTTTAACTTTTAGCAAATTT+TGG | - | 51331:8917-8936 | MS.gene050419:CDS | 15.0% |
| !! | AAAATTCAGTATTGTTCATA+CGG | - | 51331:10207-10226 | MS.gene050419:intron | 20.0% |
| !! | AAAGTAAACAAACTATATTG+AGG | + | 51331:8597-8616 | MS.gene050419:intergenic | 20.0% |
| !! | AAGTAAACAAACTATATTGA+GGG | + | 51331:8596-8615 | MS.gene050419:intergenic | 20.0% |
| !! | AATTCATATACCACATTTAA+AGG | - | 51331:7666-7685 | MS.gene050419:intron | 20.0% |
| !! | AGTTTACTGCATAAAAATAT+AGG | + | 51331:9016-9035 | MS.gene050419:intergenic | 20.0% |
| !! | ATAACACATATTTCTTGAAT+TGG | + | 51331:10518-10537 | MS.gene050419:intergenic | 20.0% |
| !! | ATGTAGTTAAAAGAATATCA+TGG | + | 51331:7440-7459 | MS.gene050419:intergenic | 20.0% |
| !! | GACATGAACATAAAATAAAA+TGG | + | 51331:6451-6470 | MS.gene050419:intergenic | 20.0% |
| !! | GTTCTACATTAAAAAAAGTA+AGG | + | 51331:7405-7424 | MS.gene050419:intergenic | 20.0% |
| !! | TAACACAAGAAAAATACAAT+TGG | + | 51331:10612-10631 | MS.gene050419:intergenic | 20.0% |
| !! | TCTATTATTACAATACATCA+TGG | - | 51331:9347-9366 | MS.gene050419:intron | 20.0% |
| !!! | AACATTACTTATTTTGTTAG+GGG | - | 51331:8180-8199 | MS.gene050419:intron | 20.0% |
| !!! | ATATTTTTATGCAGTAAACT+TGG | - | 51331:9016-9035 | MS.gene050419:intron | 20.0% |
| !!! | CAGAAATATTTTCATTCATT+TGG | - | 51331:8533-8552 | MS.gene050419:CDS | 20.0% |
| !!! | CATTTAAGATTATATCTTTC+AGG | - | 51331:8800-8819 | MS.gene050419:intron | 20.0% |
| !!! | GTTTTATCTTATAAGAATTG+TGG | + | 51331:9463-9482 | MS.gene050419:intergenic | 20.0% |
| !!! | GTTTTTCTTTTATTTAGTGA+CGG | + | 51331:7233-7252 | MS.gene050419:intergenic | 20.0% |
| !!! | TTAACTTTATTTTCTTTGTG+TGG | - | 51331:7846-7865 | MS.gene050419:intron | 20.0% |
| !!! | TTTTAGATGACATAAGTAAT+TGG | + | 51331:7197-7216 | MS.gene050419:intergenic | 20.0% |
| ! | AATGGTTAGTGCATAATATA+AGG | - | 51331:7966-7985 | MS.gene050419:intron | 25.0% |
| ! | AATTTGATTGTGACATTGTT+TGG | - | 51331:10027-10046 | MS.gene050419:intron | 25.0% |
| ! | ACACTATATATGGTTAATCT+AGG | - | 51331:9696-9715 | MS.gene050419:intron | 25.0% |
| ! | ACATAAGTAATTGGAGAAAT+TGG | + | 51331:7188-7207 | MS.gene050419:intergenic | 25.0% |
| ! | ACCAAAATCCATATAATTGT+CGG | + | 51331:8969-8988 | MS.gene050419:intergenic | 25.0% |
| ! | ACGTTCAATATAAAAACATG+AGG | + | 51331:7320-7339 | MS.gene050419:intergenic | 25.0% |
| ! | AGATAAATACACATCTTCAA+CGG | + | 51331:8416-8435 | MS.gene050419:intergenic | 25.0% |
| ! | ATAATCTTAACAACACCATT+AGG | + | 51331:10082-10101 | MS.gene050419:intergenic | 25.0% |
| ! | ATCTTCAAAACAAAAGTTTG+AGG | + | 51331:9992-10011 | MS.gene050419:intergenic | 25.0% |
| ! | ATTCAAATACGCTCTTAATT+AGG | - | 51331:10835-10854 | MS.gene050419:CDS | 25.0% |
| ! | CAATAGAGTAAAAACATAGA+AGG | + | 51331:6816-6835 | MS.gene050419:intergenic | 25.0% |
| ! | CAATTTAAACATCAAATGCA+GGG | - | 51331:7525-7544 | MS.gene050419:CDS | 25.0% |
| ! | CATCATTCTCTATAATATCA+AGG | - | 51331:9412-9431 | MS.gene050419:intron | 25.0% |
| ! | GAGTATTTGGAAAATGTTTA+TGG | - | 51331:10154-10173 | MS.gene050419:intron | 25.0% |
| ! | GGACTTGAAAAAGTTTATAA+AGG | + | 51331:7384-7403 | MS.gene050419:intergenic | 25.0% |
| ! | GTATTATTATGTTACACAAC+TGG | + | 51331:7704-7723 | MS.gene050419:intergenic | 25.0% |
| ! | TAGGTAAAAGAAGTTAATAG+TGG | + | 51331:9143-9162 | MS.gene050419:intergenic | 25.0% |
| ! | TATGATAAAATTTACAGCAC+CGG | + | 51331:7552-7571 | MS.gene050419:intergenic | 25.0% |
| ! | TCAATTTAAACATCAAATGC+AGG | - | 51331:7524-7543 | MS.gene050419:CDS | 25.0% |
| ! | TCCATAAATGAGTGAAAATA+CGG | - | 51331:7105-7124 | MS.gene050419:intron | 25.0% |
| ! | TCTGTATTTACCTTTAAATG+TGG | + | 51331:7679-7698 | MS.gene050419:intergenic | 25.0% |
| ! | TGATCTATTAGCATTTAGAA+AGG | - | 51331:9084-9103 | MS.gene050419:intron | 25.0% |
| !! | ATTTGGATTTTCTTGACAAA+AGG | - | 51331:8550-8569 | MS.gene050419:CDS | 25.0% |
| !! | CTATTAACTTCTTTTACCTA+TGG | - | 51331:9143-9162 | MS.gene050419:intron | 25.0% |
| !! | GCATTTTTCCACAATATATA+GGG | + | 51331:10263-10282 | MS.gene050419:intergenic | 25.0% |
| !! | GTGTTGTTAAGATTATTGAT+AGG | - | 51331:10086-10105 | MS.gene050419:intron | 25.0% |
| !! | TGAAGTACTTACACTATATA+TGG | - | 51331:9686-9705 | MS.gene050419:intron | 25.0% |
| !! | TGCATTTTTCCACAATATAT+AGG | + | 51331:10264-10283 | MS.gene050419:intergenic | 25.0% |
| !! | TTGAGATTGGTGAAATTTTA+GGG | + | 51331:9178-9197 | MS.gene050419:intergenic | 25.0% |
| !! | TTTGGATTTTCTTGACAAAA+GGG | - | 51331:8551-8570 | MS.gene050419:CDS | 25.0% |
| !! | TTTTCACTCATTTATGGAAT+TGG | + | 51331:7103-7122 | MS.gene050419:intergenic | 25.0% |
| !!! | AAAATCGACTGATTTGATAA+TGG | - | 51331:7072-7091 | MS.gene050419:intron | 25.0% |
| !!! | CTTGCATAACTTTTTTATCT+TGG | + | 51331:7604-7623 | MS.gene050419:intergenic | 25.0% |
| !!! | GAGGAATATTTTTTCCATAA+GGG | - | 51331:8472-8491 | MS.gene050419:intron | 25.0% |
| !!! | TGAGGAATATTTTTTCCATA+AGG | - | 51331:8471-8490 | MS.gene050419:intron | 25.0% |
| !!! | TTTGAGATTGGTGAAATTTT+AGG | + | 51331:9179-9198 | MS.gene050419:intergenic | 25.0% |
| AAGTCTCTTTCCATATCAAA+TGG | + | 51331:10943-10962 | MS.gene050419:intergenic | 30.0% | |
| AATCTCATAAAACTTTCCCA+AGG | - | 51331:10115-10134 | MS.gene050419:intron | 30.0% | |
| AGAGTAAAAACATAGAAGGA+AGG | + | 51331:6812-6831 | MS.gene050419:intergenic | 30.0% | |
| ATAAAAATATAGGTGTGCAG+TGG | + | 51331:9006-9025 | MS.gene050419:intergenic | 30.0% | |
| ATAGGAGAAATTCAACCTAA+TGG | - | 51331:10064-10083 | MS.gene050419:intron | 30.0% | |
| ATGAAGAAATCACCAAGAAA+TGG | - | 51331:10442-10461 | MS.gene050419:intron | 30.0% | |
| ATGCTTACATCTTCTACTAT+TGG | + | 51331:10187-10206 | MS.gene050419:intergenic | 30.0% | |
| ATTTCGTTGTATACAGATAC+AGG | + | 51331:9792-9811 | MS.gene050419:intergenic | 30.0% | |
| ATTTGATATGGAAAGAGACT+TGG | - | 51331:10942-10961 | MS.gene050419:intron | 30.0% | |
| CAATCTCAAATTTCTTTCCT+TGG | - | 51331:9189-9208 | MS.gene050419:CDS | 30.0% | |
| CATAAATGAGTGAAAATACG+GGG | - | 51331:7107-7126 | MS.gene050419:intron | 30.0% | |
| CCATAAATGAGTGAAAATAC+GGG | - | 51331:7106-7125 | MS.gene050419:intron | 30.0% | |
| GAGGATGAAGTAAATATGTA+TGG | + | 51331:6939-6958 | MS.gene050419:intergenic | 30.0% | |
| GTATATTGCACTTGAGTATT+TGG | - | 51331:10141-10160 | MS.gene050419:intron | 30.0% | |
| GTATTTATCTTTCCTTCCTT+TGG | - | 51331:8426-8445 | MS.gene050419:intron | 30.0% | |
| TATAGTTTGGATCATATGTG+TGG | - | 51331:6530-6549 | MS.gene050419:intron | 30.0% | |
| TATGATGAAGTCATGCATAT+AGG | - | 51331:6571-6590 | MS.gene050419:intron | 30.0% | |
| TCATGTAGACTTATATGACA+AGG | - | 51331:6469-6488 | MS.gene050419:CDS | 30.0% | |
| TGAAGAAATCACCAAGAAAT+GGG | - | 51331:10443-10462 | MS.gene050419:intron | 30.0% | |
| TGAGAACGTTATATAGAAGT+GGG | + | 51331:6777-6796 | MS.gene050419:intergenic | 30.0% | |
| TGCACAATAATGTATACTAG+TGG | - | 51331:8117-8136 | MS.gene050419:CDS | 30.0% | |
| TTCATATTTAGGCTCTTGAT+AGG | - | 51331:10334-10353 | MS.gene050419:intron | 30.0% | |
| TTGAAACTCATGTAGTAAAG+AGG | + | 51331:9118-9137 | MS.gene050419:intergenic | 30.0% | |
| ! | AAAACATGAGGTGTTAGAAT+CGG | + | 51331:7308-7327 | MS.gene050419:intergenic | 30.0% |
| ! | AAGCTTGTTTATGTTGATGT+AGG | - | 51331:6844-6863 | MS.gene050419:CDS | 30.0% |
| ! | ACCGACAATTATATGGATTT+TGG | - | 51331:8965-8984 | MS.gene050419:CDS | 30.0% |
| ! | CAAGGAAAGAAATTTGAGAT+TGG | + | 51331:9191-9210 | MS.gene050419:intergenic | 30.0% |
| ! | TCAAAACAAAAGTTTGAGGT+TGG | + | 51331:9988-10007 | MS.gene050419:intergenic | 30.0% |
| ! | TTCTTGGTGATTTCTTCATT+TGG | + | 51331:10441-10460 | MS.gene050419:intergenic | 30.0% |
| ! | TTTCTCTGTTTTGTGCAATT+AGG | - | 51331:6965-6984 | MS.gene050419:CDS | 30.0% |
| ! | TTTTATGCAGTAAACTTGGT+TGG | - | 51331:9020-9039 | MS.gene050419:intron | 30.0% |
| !! | AAGGGCTTTGAACAAATAAA+AGG | - | 51331:10898-10917 | MS.gene050419:intron | 30.0% |
| !!! | TACTTATTTTGTTAGGGGAA+TGG | - | 51331:8185-8204 | MS.gene050419:intron | 30.0% |
| AAACTTGGTTGGATGAAGAA+AGG | - | 51331:9031-9050 | MS.gene050419:intron | 35.0% | |
| AAAGATAAAGCAACCAGCAT+TGG | - | 51331:7910-7929 | MS.gene050419:intron | 35.0% | |
| AAATCAGCTTCACGATTGAA+AGG | - | 51331:7758-7777 | MS.gene050419:intron | 35.0% | |
| AACAATACTCTTACGAGCAT+AGG | - | 51331:9480-9499 | MS.gene050419:CDS | 35.0% | |
| AAGAAATGGGCATACACAAA+TGG | - | 51331:10456-10475 | MS.gene050419:intron | 35.0% | |
| AAGATAAAGCAACCAGCATT+GGG | - | 51331:7911-7930 | MS.gene050419:intron | 35.0% | |
| AAGTGCAATATACTCTCCTT+GGG | + | 51331:10134-10153 | MS.gene050419:intergenic | 35.0% | |
| AATGCTAATAGATCAGCGAA+TGG | + | 51331:9079-9098 | MS.gene050419:intergenic | 35.0% | |
| AATTGTGGTTGTGCTAACAA+CGG | + | 51331:9448-9467 | MS.gene050419:intergenic | 35.0% | |
| ACAAAGGAATCCATAGTAGA+TGG | - | 51331:9927-9946 | MS.gene050419:intron | 35.0% | |
| AGATCCACATCCATTTGATA+TGG | - | 51331:10930-10949 | MS.gene050419:intron | 35.0% | |
| ATGGATCAAATTGTCCTCAA+TGG | - | 51331:6733-6752 | MS.gene050419:intron | 35.0% | |
| ATGGATTCCTTTGTTAACTC+AGG | + | 51331:9921-9940 | MS.gene050419:intergenic | 35.0% | |
| ATGTATACTAGTGGAACAAG+TGG | - | 51331:8126-8145 | MS.gene050419:CDS | 35.0% | |
| ATTTCTTTCCTTGGTGAGTT+AGG | - | 51331:9198-9217 | MS.gene050419:CDS | 35.0% | |
| ATTTGTGTATGCCCATTTCT+TGG | + | 51331:10457-10476 | MS.gene050419:intergenic | 35.0% | |
| CAAAAACCCTGAGTTAACAA+AGG | - | 51331:9911-9930 | MS.gene050419:intron | 35.0% | |
| CATATATTATGAGCTTGTGG+TGG | + | 51331:8099-8118 | MS.gene050419:intergenic | 35.0% | |
| CATCTTACTACTACCTTGTA+GGG | - | 51331:8048-8067 | MS.gene050419:intron | 35.0% | |
| CCAAAAACTGTTCTTCTAAC+TGG | + | 51331:8854-8873 | MS.gene050419:intergenic | 35.0% | |
| CGTGTTCGACTAATAATAAC+CGG | - | 51331:9241-9260 | MS.gene050419:CDS | 35.0% | |
| CTTTCCATATCAAATGGATG+TGG | + | 51331:10937-10956 | MS.gene050419:intergenic | 35.0% | |
| GAGAAACAAGGTAACACATA+CGG | - | 51331:10560-10579 | MS.gene050419:intron | 35.0% | |
| GAGTCAAAACAACACCTTTA+GGG | + | 51331:8155-8174 | MS.gene050419:intergenic | 35.0% | |
| GTCTGAAAATGATCCTAGTT+GGG | - | 51331:6991-7010 | MS.gene050419:CDS | 35.0% | |
| GTGAGAACGTTATATAGAAG+TGG | + | 51331:6778-6797 | MS.gene050419:intergenic | 35.0% | |
| GTGCATATATTATGAGCTTG+TGG | + | 51331:8102-8121 | MS.gene050419:intergenic | 35.0% | |
| TAGGTTTGACTGAAACTTGT+GGG | - | 51331:9715-9734 | MS.gene050419:intron | 35.0% | |
| TATCCTCAAAACCGTATGTT+GGG | - | 51331:6384-6403 | MS.gene050419:CDS | 35.0% | |
| TCATCTTACTACTACCTTGT+AGG | - | 51331:8047-8066 | MS.gene050419:intron | 35.0% | |
| TCTGAAAATGATCCTAGTTG+GGG | - | 51331:6992-7011 | MS.gene050419:CDS | 35.0% | |
| TCTTCAATCTCTGAACTCAA+CGG | + | 51331:9274-9293 | MS.gene050419:intergenic | 35.0% | |
| TGAGTCAAAACAACACCTTT+AGG | + | 51331:8156-8175 | MS.gene050419:intergenic | 35.0% | |
| TGCACAAAACAGAGAAAACA+GGG | + | 51331:6962-6981 | MS.gene050419:intergenic | 35.0% | |
| TGCATTGAGGGATGATTTAA+TGG | - | 51331:8663-8682 | MS.gene050419:CDS | 35.0% | |
| TGGATTCCTTTGTTAACTCA+GGG | + | 51331:9920-9939 | MS.gene050419:intergenic | 35.0% | |
| TGTGACAACCGACAATTATA+TGG | - | 51331:8958-8977 | MS.gene050419:CDS | 35.0% | |
| TTGAAAAGGTCTATGAAGGT+AGG | - | 51331:8725-8744 | MS.gene050419:intron | 35.0% | |
| TTGCACAAAACAGAGAAAAC+AGG | + | 51331:6963-6982 | MS.gene050419:intergenic | 35.0% | |
| TTTAGGGAAGGTTAATCCAT+AGG | + | 51331:9162-9181 | MS.gene050419:intergenic | 35.0% | |
| ! | AGACCTTTTCAAAGACTCTA+GGG | + | 51331:8717-8736 | MS.gene050419:intergenic | 35.0% |
| ! | CCAGTTAGAAGAACAGTTTT+TGG | - | 51331:8851-8870 | MS.gene050419:intron | 35.0% |
| ! | CCCGTATTTTCACTCATTTA+TGG | + | 51331:7109-7128 | MS.gene050419:intergenic | 35.0% |
| ! | GTCTTTGAAAAGGTCTATGA+AGG | - | 51331:8721-8740 | MS.gene050419:CDS | 35.0% |
| ! | TAGACCTTTTCAAAGACTCT+AGG | + | 51331:8718-8737 | MS.gene050419:intergenic | 35.0% |
| ! | TAGGGGAATGGATATTTTCA+TGG | - | 51331:8197-8216 | MS.gene050419:intron | 35.0% |
| ! | TTGTTAACTCAGGGTTTTTG+TGG | + | 51331:9911-9930 | MS.gene050419:intergenic | 35.0% |
| !! | AAATTGTCCTCAATGGATTG+CGG | - | 51331:6740-6759 | MS.gene050419:intron | 35.0% |
| !! | ATCGACTGATTTGATAATGG+AGG | - | 51331:7075-7094 | MS.gene050419:intron | 35.0% |
| !! | GATTGGTGAAATTTTAGGGA+AGG | + | 51331:9174-9193 | MS.gene050419:intergenic | 35.0% |
| !! | TCGACTGATTTGATAATGGA+GGG | - | 51331:7076-7095 | MS.gene050419:intron | 35.0% |
| !! | TTACCAAGAGTATCATAGAG+AGG | + | 51331:6899-6918 | MS.gene050419:intergenic | 35.0% |
| !! | TTTGAGTTGCTTGTGAATGA+AGG | - | 51331:8633-8652 | MS.gene050419:intron | 35.0% |
| !! | TTTTTGGCATGCTCTACAAA+CGG | - | 51331:8867-8886 | MS.gene050419:intron | 35.0% |
| !!! | GAATTTTTGCGTGTTACTTC+TGG | - | 51331:9292-9311 | MS.gene050419:CDS | 35.0% |
| AAGAACTCTTCCCAGGAATA+TGG | + | 51331:7943-7962 | MS.gene050419:intergenic | 40.0% | |
| ACATTGTTTGGCATCTTCAG+GGG | - | 51331:10039-10058 | MS.gene050419:intron | 40.0% | |
| ACTAGAAGAAGTTCCAGAGA+TGG | - | 51331:9815-9834 | MS.gene050419:CDS | 40.0% | |
| AGATAAAGCAACCAGCATTG+GGG | - | 51331:7912-7931 | MS.gene050419:intron | 40.0% | |
| AGGAATCCATAGTAGATGGA+TGG | - | 51331:9931-9950 | MS.gene050419:intron | 40.0% | |
| AGGTACACAAACCAAGCTAT+GGG | + | 51331:6879-6898 | MS.gene050419:intergenic | 40.0% | |
| ATAGACACAAACACGAGTAC+TGG | + | 51331:9653-9672 | MS.gene050419:intergenic | 40.0% | |
| ATTCCTCAATTGTCCGATCA+AGG | + | 51331:8459-8478 | MS.gene050419:intergenic | 40.0% | |
| CAAGTGCAATATACTCTCCT+TGG | + | 51331:10135-10154 | MS.gene050419:intergenic | 40.0% | |
| CAATTATAGGGCTCACGAAT+TGG | - | 51331:6705-6724 | MS.gene050419:intron | 40.0% | |
| CATGGAACAGTTTGAAGACA+AGG | - | 51331:8215-8234 | MS.gene050419:intron | 40.0% | |
| CATTTGTAAGAACTCTTCCC+AGG | + | 51331:7950-7969 | MS.gene050419:intergenic | 40.0% | |
| CGTCTGAAAATGATCCTAGT+TGG | - | 51331:6990-7009 | MS.gene050419:CDS | 40.0% | |
| CTAGAAGAAGTTCCAGAGAT+GGG | - | 51331:9816-9835 | MS.gene050419:CDS | 40.0% | |
| CTAGGTTTGACTGAAACTTG+TGG | - | 51331:9714-9733 | MS.gene050419:intron | 40.0% | |
| CTGGGAAGAGTTCTTACAAA+TGG | - | 51331:7948-7967 | MS.gene050419:intron | 40.0% | |
| GAAGGATCTAACTGCATTGA+GGG | - | 51331:8651-8670 | MS.gene050419:intron | 40.0% | |
| GACATTGTTTGGCATCTTCA+GGG | - | 51331:10038-10057 | MS.gene050419:intron | 40.0% | |
| GCACAAAACAGAGAAAACAG+GGG | + | 51331:6961-6980 | MS.gene050419:intergenic | 40.0% | |
| GCATACACAAATGGTTTCGT+GGG | - | 51331:10465-10484 | MS.gene050419:intron | 40.0% | |
| GTACCTCTCTATGATACTCT+TGG | - | 51331:6893-6912 | MS.gene050419:CDS | 40.0% | |
| GTGAAACCATCCATCTACTA+TGG | + | 51331:9940-9959 | MS.gene050419:intergenic | 40.0% | |
| GTTCGACTAATAATAACCGG+AGG | - | 51331:9244-9263 | MS.gene050419:CDS | 40.0% | |
| TAAACATCAAATGCAGGGTC+CGG | - | 51331:7530-7549 | MS.gene050419:CDS | 40.0% | |
| TATCCTTGATCGGACAATTG+AGG | - | 51331:8453-8472 | MS.gene050419:intron | 40.0% | |
| TGAAACCAACACTGTTTGCT+GGG | - | 51331:8689-8708 | MS.gene050419:CDS | 40.0% | |
| TGAAGGATCTAACTGCATTG+AGG | - | 51331:8650-8669 | MS.gene050419:intron | 40.0% | |
| TGACATTGTTTGGCATCTTC+AGG | - | 51331:10037-10056 | MS.gene050419:intron | 40.0% | |
| TGCTACGACCCTATATATTG+TGG | - | 51331:10252-10271 | MS.gene050419:intron | 40.0% | |
| TGTATGTCAAGGCTATGGTA+AGG | - | 51331:9321-9340 | MS.gene050419:intron | 40.0% | |
| TTCAGGTATCAAGAAAGCAG+TGG | - | 51331:8817-8836 | MS.gene050419:intron | 40.0% | |
| TTGAAACCAACACTGTTTGC+TGG | - | 51331:8688-8707 | MS.gene050419:CDS | 40.0% | |
| TTTGTTCAAAGCCCTTAAGC+TGG | + | 51331:10894-10913 | MS.gene050419:intergenic | 40.0% | |
| ! | AGAGGGAAATCAGTTTTCTC+CGG | - | 51331:9882-9901 | MS.gene050419:intron | 40.0% |
| ! | CGTGAAGCTGATTTACAATC+AGG | + | 51331:7752-7771 | MS.gene050419:intergenic | 40.0% |
| ! | CTTTGGCTCATATCCTTGAT+CGG | - | 51331:8443-8462 | MS.gene050419:intron | 40.0% |
| ! | GCTTTTGTATGTCAAGGCTA+TGG | - | 51331:9316-9335 | MS.gene050419:intron | 40.0% |
| ! | TCTGGTGCTTTTGTATGTCA+AGG | - | 51331:9310-9329 | MS.gene050419:CDS | 40.0% |
| ! | TGGAGTTTCTTTTCCCTACA+AGG | + | 51331:8064-8083 | MS.gene050419:intergenic | 40.0% |
| ! | TGGGGTCACTCTTCATATTT+TGG | - | 51331:7010-7029 | MS.gene050419:intron | 40.0% |
| ! | TTTTCAACGCACCAGCTTAA+GGG | - | 51331:10880-10899 | MS.gene050419:intron | 40.0% |
| !! | GAGAAATTGGTGTCAATGCT+AGG | + | 51331:7175-7194 | MS.gene050419:intergenic | 40.0% |
| !! | GCGTGAATTTGTTGATGGAA+AGG | - | 51331:6410-6429 | MS.gene050419:CDS | 40.0% |
| AGACATATCTCGCCACATGA+AGG | + | 51331:9861-9880 | MS.gene050419:intergenic | 45.0% | |
| AGAGGATTGTAACCCATCTC+TGG | + | 51331:9831-9850 | MS.gene050419:intergenic | 45.0% | |
| AGTTAGGTCAAAGCTCGGTT+AGG | - | 51331:9214-9233 | MS.gene050419:CDS | 45.0% | |
| ATATGGCTTAACCCCAATGC+TGG | + | 51331:7926-7945 | MS.gene050419:intergenic | 45.0% | |
| ATGTGCATGCTTGGTACTGT+TGG | - | 51331:9765-9784 | MS.gene050419:intron | 45.0% | |
| ATTCACGCCATCCCAACATA+CGG | + | 51331:6398-6417 | MS.gene050419:intergenic | 45.0% | |
| CAAAACAGAGAAAACAGGGG+AGG | + | 51331:6958-6977 | MS.gene050419:intergenic | 45.0% | |
| CAAGGATATGAGCCAAAGGA+AGG | + | 51331:8441-8460 | MS.gene050419:intergenic | 45.0% | |
| CCAAGCATGCACATTTCATC+AGG | + | 51331:9759-9778 | MS.gene050419:intergenic | 45.0% | |
| CCTGATGAAATGTGCATGCT+TGG | - | 51331:9756-9775 | MS.gene050419:intron | 45.0% | |
| CGATCAAGGATATGAGCCAA+AGG | + | 51331:8445-8464 | MS.gene050419:intergenic | 45.0% | |
| CTCAAAACCGTATGTTGGGA+TGG | - | 51331:6388-6407 | MS.gene050419:CDS | 45.0% | |
| CTGCATGAACATATACCCCA+TGG | + | 51331:8516-8535 | MS.gene050419:intergenic | 45.0% | |
| GAGGTACACAAACCAAGCTA+TGG | + | 51331:6880-6899 | MS.gene050419:intergenic | 45.0% | |
| GGCATACACAAATGGTTTCG+TGG | - | 51331:10464-10483 | MS.gene050419:intron | 45.0% | |
| GGCTCACGAATTGGAGTTTA+TGG | - | 51331:6714-6733 | MS.gene050419:intron | 45.0% | |
| GTAGATGGATGGTTTCACAC+AGG | - | 51331:9942-9961 | MS.gene050419:intron | 45.0% | |
| GTGGCGAGATATGTCTTAGA+GGG | - | 51331:9865-9884 | MS.gene050419:intron | 45.0% | |
| GTTGACTGCTGAGAGAAACA+AGG | - | 51331:10548-10567 | MS.gene050419:intron | 45.0% | |
| TATGAAGAGTGACCCCAACT+AGG | + | 51331:7007-7026 | MS.gene050419:intergenic | 45.0% | |
| TGGGGTTAAGCCATATTCCT+GGG | - | 51331:7930-7949 | MS.gene050419:intron | 45.0% | |
| TGGTGAGTTAGGTCAAAGCT+CGG | - | 51331:9209-9228 | MS.gene050419:CDS | 45.0% | |
| TGTGGCGAGATATGTCTTAG+AGG | - | 51331:9864-9883 | MS.gene050419:intron | 45.0% | |
| TTGGGGTTAAGCCATATTCC+TGG | - | 51331:7929-7948 | MS.gene050419:intron | 45.0% | |
| ! | AGCTTTGACCTAACTCACCA+AGG | + | 51331:9209-9228 | MS.gene050419:intergenic | 45.0% |
| ! | ATCTGTTGGCTACTACCATG+GGG | - | 51331:8498-8517 | MS.gene050419:intron | 45.0% |
| ! | ATGAGCTTGTGGTGGTGAAA+TGG | + | 51331:8091-8110 | MS.gene050419:intergenic | 45.0% |
| ! | CATCCCAACATACGGTTTTG+AGG | + | 51331:6390-6409 | MS.gene050419:intergenic | 45.0% |
| ! | CATCTGTTGGCTACTACCAT+GGG | - | 51331:8497-8516 | MS.gene050419:intron | 45.0% |
| ! | CTTTTCAACGCACCAGCTTA+AGG | - | 51331:10879-10898 | MS.gene050419:intron | 45.0% |
| ! | GAAACCAACACTGTTTGCTG+GGG | - | 51331:8690-8709 | MS.gene050419:CDS | 45.0% |
| ! | GGTCCCTAGAGTCTTTGAAA+AGG | - | 51331:8711-8730 | MS.gene050419:CDS | 45.0% |
| ! | TGTGGTGGTGAAATGGTTGA+TGG | + | 51331:8084-8103 | MS.gene050419:intergenic | 45.0% |
| ! | TTCCATAAGGGTGCATCTGT+TGG | - | 51331:8484-8503 | MS.gene050419:intron | 45.0% |
| !! | GAGATGGGTTACAATCCTCT+TGG | - | 51331:9831-9850 | MS.gene050419:CDS | 45.0% |
| !! | GGATGGCGTGAATTTGTTGA+TGG | - | 51331:6405-6424 | MS.gene050419:CDS | 45.0% |
| !!! | ACGGTTTTAAAGTGCAGCTG+TGG | - | 51331:10226-10245 | MS.gene050419:intron | 45.0% |
| !! | TAAAAATAAAGAAAAATTTA+AGG | + | 51331:7145-7164 | MS.gene050419:intergenic | 5.0% |
| !!! | ATATTTTAAAATTATTAACA+CGG | - | 51331:9606-9625 | MS.gene050419:intron | 5.0% |
| !!! | ATTTTTAATTACTTATTTAT+CGG | - | 51331:7458-7477 | MS.gene050419:CDS | 5.0% |
| !!! | TATTTTATTTTTTTATAGTT+TGG | - | 51331:6517-6536 | MS.gene050419:intron | 5.0% |
| AGCCAACAGATGCACCCTTA+TGG | + | 51331:8489-8508 | MS.gene050419:intergenic | 50.0% | |
| CCACATGAAGGAGTTCCAAG+AGG | + | 51331:9849-9868 | MS.gene050419:intergenic | 50.0% | |
| CCTCTTGGAACTCCTTCATG+TGG | - | 51331:9846-9865 | MS.gene050419:intron | 50.0% | |
| CTCTTACGAGCATAGGACTG+AGG | - | 51331:9487-9506 | MS.gene050419:CDS | 50.0% | |
| GGAACAAGTGGAGACCCTAA+AGG | - | 51331:8138-8157 | MS.gene050419:CDS | 50.0% | |
| TAGGTCAAAGCTCGGTTAGG+AGG | - | 51331:9217-9236 | MS.gene050419:CDS | 50.0% | |
| TCCATTGCCGCAATCCATTG+AGG | + | 51331:6750-6769 | MS.gene050419:intergenic | 50.0% | |
| TGTGGTTGTGCTAACAACGG+AGG | + | 51331:9445-9464 | MS.gene050419:intergenic | 50.0% | |
| TTGGCATCTTCAGGGGACAT+AGG | - | 51331:10046-10065 | MS.gene050419:intron | 50.0% | |
| ! | CTCAGGGTTTTTGTGGTAGC+CGG | + | 51331:9904-9923 | MS.gene050419:intergenic | 50.0% |
| ! | GCATCTGTTGGCTACTACCA+TGG | - | 51331:8496-8515 | MS.gene050419:intron | 50.0% |
| !! | TCAATGGATTGCGGCAATGG+AGG | - | 51331:6749-6768 | MS.gene050419:intron | 50.0% |
| !! | TCCTCAATGGATTGCGGCAA+TGG | - | 51331:6746-6765 | MS.gene050419:intron | 50.0% |
| GGTTCAGCTCTACGTGCATC+TGG | - | 51331:6592-6611 | MS.gene050419:intron | 55.0% | |
| TGAACTCAACGGTGCACCTC+CGG | + | 51331:9263-9282 | MS.gene050419:intergenic | 55.0% | |
| GGGACCCCAGCAAACAGTGT+TGG | + | 51331:8697-8716 | MS.gene050419:intergenic | 60.0% | |
| !! | GGCTTGTTGCGCCCATAGCT+TGG | - | 51331:6865-6884 | MS.gene050419:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51331 | gene | 6384 | 11014 | 6384 | ID=MS.gene050419 |
| 51331 | mRNA | 6384 | 11014 | 6384 | ID=MS.gene050419.t1;Parent=MS.gene050419 |
| 51331 | exon | 10967 | 11014 | 10967 | ID=MS.gene050419.t1.exon1;Parent=MS.gene050419.t1 |
| 51331 | CDS | 10967 | 11014 | 10967 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 10774 | 10863 | 10774 | ID=MS.gene050419.t1.exon2;Parent=MS.gene050419.t1 |
| 51331 | CDS | 10774 | 10863 | 10774 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 10628 | 10684 | 10628 | ID=MS.gene050419.t1.exon3;Parent=MS.gene050419.t1 |
| 51331 | CDS | 10628 | 10684 | 10628 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 10484 | 10532 | 10484 | ID=MS.gene050419.t1.exon4;Parent=MS.gene050419.t1 |
| 51331 | CDS | 10484 | 10532 | 10484 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 9776 | 9852 | 9776 | ID=MS.gene050419.t1.exon5;Parent=MS.gene050419.t1 |
| 51331 | CDS | 9776 | 9852 | 9776 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 9619 | 9658 | 9619 | ID=MS.gene050419.t1.exon6;Parent=MS.gene050419.t1 |
| 51331 | CDS | 9619 | 9658 | 9619 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 9429 | 9523 | 9429 | ID=MS.gene050419.t1.exon7;Parent=MS.gene050419.t1 |
| 51331 | CDS | 9429 | 9523 | 9429 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 9162 | 9329 | 9162 | ID=MS.gene050419.t1.exon8;Parent=MS.gene050419.t1 |
| 51331 | CDS | 9162 | 9329 | 9162 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 8879 | 8989 | 8879 | ID=MS.gene050419.t1.exon9;Parent=MS.gene050419.t1 |
| 51331 | CDS | 8879 | 8989 | 8879 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 8656 | 8743 | 8656 | ID=MS.gene050419.t1.exon10;Parent=MS.gene050419.t1 |
| 51331 | CDS | 8656 | 8743 | 8656 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 8510 | 8576 | 8510 | ID=MS.gene050419.t1.exon11;Parent=MS.gene050419.t1 |
| 51331 | CDS | 8510 | 8576 | 8510 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 8293 | 8368 | 8293 | ID=MS.gene050419.t1.exon12;Parent=MS.gene050419.t1 |
| 51331 | CDS | 8293 | 8368 | 8293 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 8061 | 8178 | 8061 | ID=MS.gene050419.t1.exon13;Parent=MS.gene050419.t1 |
| 51331 | CDS | 8061 | 8178 | 8061 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 7435 | 7680 | 7435 | ID=MS.gene050419.t1.exon14;Parent=MS.gene050419.t1 |
| 51331 | CDS | 7435 | 7680 | 7435 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 7200 | 7339 | 7200 | ID=MS.gene050419.t1.exon15;Parent=MS.gene050419.t1 |
| 51331 | CDS | 7200 | 7339 | 7200 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 6829 | 7011 | 6829 | ID=MS.gene050419.t1.exon16;Parent=MS.gene050419.t1 |
| 51331 | CDS | 6829 | 7011 | 6829 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| 51331 | exon | 6384 | 6503 | 6384 | ID=MS.gene050419.t1.exon17;Parent=MS.gene050419.t1 |
| 51331 | CDS | 6384 | 6503 | 6384 | ID=cds.MS.gene050419.t1;Parent=MS.gene050419.t1 |
| Gene Sequence |
| Protein sequence |
