Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85836.t1 | RHN51194.1 | 82.3 | 616 | 83 | 1 | 1 | 590 | 1 | 616 | 3.00E-282 | 980.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85836.t1 | Q05196 | 50.4 | 568 | 258 | 7 | 24 | 569 | 58 | 623 | 1.9e-144 | 514.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85836.t1 | A0A396HH90 | 82.3 | 616 | 83 | 1 | 1 | 590 | 1 | 616 | 2.2e-282 | 980.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85836.t1 | MTR_6g040190 | 81.331 | 616 | 89 | 1 | 1 | 590 | 1 | 616 | 0.0 | 1003 |
MS.gene85836.t1 | MTR_1g097440 | 61.420 | 648 | 191 | 12 | 1 | 596 | 1 | 641 | 0.0 | 753 |
MS.gene85836.t1 | MTR_6g040070 | 70.753 | 465 | 113 | 7 | 99 | 553 | 1 | 452 | 0.0 | 629 |
MS.gene85836.t1 | MTR_6g040070 | 35.417 | 288 | 164 | 6 | 25 | 292 | 15 | 300 | 7.34e-41 | 159 |
MS.gene85836.t1 | MTR_4g085540 | 52.035 | 565 | 250 | 8 | 22 | 569 | 31 | 591 | 0.0 | 537 |
MS.gene85836.t1 | MTR_1g019150 | 57.589 | 448 | 174 | 6 | 11 | 447 | 21 | 463 | 1.24e-174 | 510 |
MS.gene85836.t1 | MTR_3g102040 | 49.479 | 576 | 232 | 12 | 12 | 565 | 17 | 555 | 3.72e-167 | 490 |
MS.gene85836.t1 | MTR_7g102730 | 41.278 | 579 | 281 | 10 | 25 | 567 | 10 | 565 | 6.00e-128 | 389 |
MS.gene85836.t1 | MTR_1g061870 | 46.882 | 433 | 210 | 7 | 25 | 452 | 15 | 432 | 2.02e-122 | 372 |
MS.gene85836.t1 | MTR_3g065190 | 38.202 | 178 | 107 | 3 | 19 | 194 | 19 | 195 | 6.25e-33 | 130 |
MS.gene85836.t1 | MTR_3g065190 | 31.183 | 186 | 107 | 6 | 203 | 385 | 28 | 195 | 6.22e-18 | 86.3 |
MS.gene85836.t1 | MTR_1723s0010 | 74.026 | 77 | 19 | 1 | 3 | 78 | 2 | 78 | 3.24e-32 | 119 |
MS.gene85836.t1 | MTR_1889s0010 | 75.385 | 65 | 16 | 0 | 16 | 80 | 11 | 75 | 1.48e-25 | 100 |
MS.gene85836.t1 | MTR_1g020080 | 28.030 | 264 | 162 | 7 | 23 | 263 | 95 | 353 | 5.63e-25 | 108 |
MS.gene85836.t1 | MTR_1g020080 | 23.675 | 283 | 202 | 8 | 115 | 389 | 99 | 375 | 8.85e-19 | 89.4 |
MS.gene85836.t1 | MTR_1g020080 | 28.272 | 191 | 115 | 4 | 14 | 187 | 179 | 364 | 4.37e-17 | 84.3 |
MS.gene85836.t1 | MTR_3g101370 | 27.698 | 278 | 170 | 9 | 12 | 264 | 80 | 351 | 3.53e-24 | 105 |
MS.gene85836.t1 | MTR_3g101370 | 23.264 | 288 | 192 | 9 | 115 | 386 | 95 | 369 | 5.79e-17 | 84.0 |
MS.gene85836.t1 | MTR_3g101370 | 27.933 | 179 | 107 | 4 | 26 | 187 | 188 | 361 | 1.11e-12 | 70.5 |
MS.gene85836.t1 | MTR_8g022050 | 26.370 | 292 | 169 | 8 | 26 | 280 | 63 | 345 | 7.95e-23 | 101 |
MS.gene85836.t1 | MTR_8g022050 | 26.207 | 290 | 176 | 9 | 114 | 373 | 63 | 344 | 1.29e-16 | 82.8 |
MS.gene85836.t1 | MTR_8g022050 | 26.374 | 182 | 114 | 5 | 201 | 381 | 63 | 225 | 1.39e-12 | 70.5 |
MS.gene85836.t1 | MTR_4g131970 | 26.692 | 266 | 165 | 7 | 23 | 263 | 72 | 332 | 7.67e-22 | 98.6 |
MS.gene85836.t1 | MTR_4g131970 | 24.232 | 293 | 188 | 10 | 115 | 388 | 76 | 353 | 1.16e-18 | 89.0 |
MS.gene85836.t1 | MTR_4g131970 | 25.521 | 192 | 126 | 6 | 195 | 382 | 69 | 247 | 3.15e-11 | 65.9 |
MS.gene85836.t1 | MTR_2g022950 | 26.217 | 267 | 166 | 8 | 23 | 263 | 58 | 319 | 8.86e-22 | 98.2 |
MS.gene85836.t1 | MTR_2g022950 | 22.378 | 286 | 203 | 7 | 115 | 388 | 62 | 340 | 9.71e-18 | 86.3 |
MS.gene85836.t1 | MTR_4g124940 | 27.106 | 273 | 153 | 8 | 26 | 261 | 47 | 310 | 1.18e-21 | 97.8 |
MS.gene85836.t1 | MTR_4g124940 | 25.939 | 293 | 179 | 7 | 114 | 381 | 47 | 326 | 4.89e-20 | 93.2 |
MS.gene85836.t1 | MTR_4g124940 | 25.121 | 207 | 133 | 6 | 201 | 404 | 47 | 234 | 2.14e-15 | 79.0 |
MS.gene85836.t1 | MTR_6g040200 | 58.974 | 78 | 30 | 1 | 451 | 528 | 7 | 82 | 6.95e-20 | 84.7 |
MS.gene85836.t1 | MTR_3g109090 | 24.176 | 273 | 164 | 6 | 26 | 262 | 45 | 310 | 2.65e-19 | 91.3 |
MS.gene85836.t1 | MTR_3g109090 | 30.055 | 183 | 106 | 6 | 201 | 381 | 45 | 207 | 1.90e-15 | 79.3 |
MS.gene85836.t1 | MTR_3g109090 | 24.176 | 273 | 164 | 6 | 26 | 262 | 61 | 326 | 2.96e-19 | 91.3 |
MS.gene85836.t1 | MTR_3g109090 | 30.055 | 183 | 106 | 6 | 201 | 381 | 61 | 223 | 2.14e-15 | 79.3 |
MS.gene85836.t1 | MTR_2g097960 | 23.592 | 284 | 168 | 7 | 23 | 262 | 13 | 291 | 5.76e-18 | 87.0 |
MS.gene85836.t1 | MTR_3g075500 | 29.703 | 202 | 127 | 6 | 186 | 385 | 100 | 288 | 1.73e-17 | 83.6 |
MS.gene85836.t1 | MTR_3g075500 | 29.474 | 190 | 112 | 4 | 23 | 196 | 107 | 290 | 3.07e-17 | 82.8 |
MS.gene85836.t1 | MTR_4g086600 | 24.199 | 281 | 165 | 7 | 26 | 263 | 117 | 392 | 3.37e-17 | 84.7 |
MS.gene85836.t1 | MTR_4g086600 | 26.066 | 211 | 146 | 4 | 202 | 409 | 118 | 321 | 4.21e-13 | 72.0 |
MS.gene85836.t1 | MTR_3g075500 | 30.409 | 171 | 97 | 4 | 23 | 177 | 107 | 271 | 2.95e-16 | 79.7 |
MS.gene85836.t1 | MTR_3g075500 | 29.730 | 185 | 115 | 6 | 186 | 368 | 100 | 271 | 3.06e-15 | 76.6 |
MS.gene85836.t1 | MTR_4g052940 | 26.119 | 268 | 181 | 7 | 25 | 284 | 110 | 368 | 3.33e-16 | 82.0 |
MS.gene85836.t1 | MTR_4g052940 | 21.530 | 353 | 216 | 10 | 113 | 456 | 110 | 410 | 1.88e-13 | 73.6 |
MS.gene85836.t1 | MTR_7g118120 | 23.810 | 273 | 184 | 7 | 25 | 285 | 104 | 364 | 4.09e-16 | 81.6 |
MS.gene85836.t1 | MTR_7g118120 | 23.368 | 291 | 196 | 9 | 102 | 386 | 93 | 362 | 7.05e-11 | 65.1 |
MS.gene85836.t1 | MTR_4g104470 | 29.834 | 181 | 118 | 3 | 23 | 195 | 120 | 299 | 4.30e-16 | 79.7 |
MS.gene85836.t1 | MTR_4g104470 | 28.495 | 186 | 120 | 4 | 202 | 385 | 124 | 298 | 1.80e-14 | 74.7 |
MS.gene85836.t1 | MTR_4g104470 | 29.545 | 176 | 115 | 5 | 115 | 282 | 124 | 298 | 7.16e-11 | 63.9 |
MS.gene85836.t1 | MTR_1g056520 | 27.322 | 183 | 119 | 4 | 27 | 196 | 110 | 291 | 9.28e-16 | 79.0 |
MS.gene85836.t1 | MTR_4g052940 | 26.860 | 242 | 161 | 6 | 25 | 258 | 110 | 343 | 1.51e-15 | 79.0 |
MS.gene85836.t1 | MTR_1g020080 | 25.989 | 177 | 124 | 4 | 23 | 192 | 95 | 271 | 2.46e-15 | 77.8 |
MS.gene85836.t1 | MTR_3g101370 | 26.316 | 190 | 130 | 6 | 12 | 192 | 80 | 268 | 2.80e-15 | 77.4 |
MS.gene85836.t1 | MTR_5g030020 | 28.767 | 219 | 143 | 6 | 201 | 415 | 97 | 306 | 4.54e-14 | 73.9 |
MS.gene85836.t1 | MTR_4g122650 | 27.461 | 193 | 122 | 5 | 199 | 387 | 87 | 265 | 4.72e-14 | 75.9 |
MS.gene85836.t1 | MTR_7g010360 | 25.177 | 282 | 194 | 7 | 25 | 298 | 350 | 622 | 7.71e-14 | 75.1 |
MS.gene85836.t1 | MTR_7g010360 | 22.507 | 351 | 217 | 14 | 113 | 457 | 350 | 651 | 1.63e-11 | 67.8 |
MS.gene85836.t1 | MTR_8g007390 | 21.739 | 253 | 179 | 6 | 27 | 268 | 216 | 460 | 1.47e-13 | 74.3 |
MS.gene85836.t1 | MTR_8g007390 | 21.739 | 253 | 179 | 6 | 27 | 268 | 217 | 461 | 1.51e-13 | 74.3 |
MS.gene85836.t1 | MTR_2g022950 | 26.590 | 173 | 118 | 5 | 23 | 186 | 58 | 230 | 2.43e-13 | 70.9 |
MS.gene85836.t1 | MTR_7g107580 | 24.691 | 243 | 146 | 7 | 202 | 437 | 18 | 230 | 3.90e-13 | 71.6 |
MS.gene85836.t1 | MTR_7g099940 | 43.023 | 86 | 48 | 1 | 301 | 385 | 32 | 117 | 6.45e-13 | 66.6 |
MS.gene85836.t1 | MTR_7g106440 | 25.134 | 187 | 124 | 4 | 27 | 197 | 111 | 297 | 7.94e-13 | 70.1 |
MS.gene85836.t1 | MTR_7g106440 | 27.717 | 184 | 121 | 6 | 202 | 379 | 111 | 288 | 2.58e-11 | 65.5 |
MS.gene85836.t1 | MTR_7g107580 | 24.691 | 243 | 146 | 7 | 202 | 437 | 18 | 230 | 8.03e-13 | 71.2 |
MS.gene85836.t1 | MTR_7g104800 | 25.781 | 256 | 160 | 9 | 25 | 264 | 101 | 342 | 1.09e-12 | 70.9 |
MS.gene85836.t1 | MTR_3g027140 | 28.708 | 209 | 136 | 6 | 177 | 379 | 34 | 235 | 1.40e-12 | 68.2 |
MS.gene85836.t1 | MTR_3g027140 | 26.744 | 172 | 112 | 4 | 27 | 185 | 62 | 232 | 1.17e-11 | 65.5 |
MS.gene85836.t1 | MTR_2g026180 | 31.694 | 183 | 103 | 9 | 115 | 279 | 6 | 184 | 2.01e-12 | 70.1 |
MS.gene85836.t1 | MTR_2g026180 | 25.287 | 174 | 121 | 4 | 202 | 369 | 6 | 176 | 2.66e-12 | 69.7 |
MS.gene85836.t1 | MTR_2g022950 | 26.590 | 173 | 118 | 5 | 23 | 186 | 58 | 230 | 2.13e-12 | 68.6 |
MS.gene85836.t1 | MTR_1g064230 | 28.205 | 195 | 113 | 5 | 115 | 283 | 86 | 279 | 3.09e-12 | 67.8 |
MS.gene85836.t1 | MTR_5g097580 | 26.190 | 252 | 142 | 11 | 115 | 342 | 8 | 239 | 7.94e-12 | 68.2 |
MS.gene85836.t1 | MTR_5g097580 | 25.989 | 177 | 114 | 6 | 202 | 369 | 8 | 176 | 1.02e-11 | 67.8 |
MS.gene85836.t1 | MTR_7g013740 | 39.759 | 83 | 49 | 1 | 301 | 382 | 37 | 119 | 8.07e-12 | 63.9 |
MS.gene85836.t1 | MTR_5g097580 | 26.190 | 252 | 142 | 11 | 115 | 342 | 8 | 239 | 8.44e-12 | 68.2 |
MS.gene85836.t1 | MTR_5g097580 | 25.989 | 177 | 114 | 6 | 202 | 369 | 8 | 176 | 1.11e-11 | 67.8 |
MS.gene85836.t1 | MTR_3g055990 | 29.032 | 186 | 102 | 9 | 115 | 279 | 8 | 184 | 1.38e-11 | 67.4 |
MS.gene85836.t1 | MTR_3g055990 | 25.967 | 181 | 109 | 6 | 202 | 369 | 8 | 176 | 8.29e-11 | 65.1 |
MS.gene85836.t1 | MTR_3g055990 | 29.032 | 186 | 102 | 9 | 115 | 279 | 8 | 184 | 1.41e-11 | 67.4 |
MS.gene85836.t1 | MTR_3g055990 | 25.967 | 181 | 109 | 6 | 202 | 369 | 8 | 176 | 7.95e-11 | 65.1 |
MS.gene85836.t1 | MTR_8g076100 | 20.532 | 263 | 189 | 5 | 27 | 277 | 420 | 674 | 2.14e-11 | 67.4 |
MS.gene85836.t1 | MTR_7g107580 | 24.590 | 244 | 146 | 8 | 202 | 437 | 18 | 231 | 2.30e-11 | 66.6 |
MS.gene85836.t1 | MTR_8g076100 | 20.532 | 263 | 189 | 5 | 27 | 277 | 420 | 674 | 2.35e-11 | 67.4 |
MS.gene85836.t1 | MTR_8g076100 | 20.532 | 263 | 189 | 5 | 27 | 277 | 420 | 674 | 2.74e-11 | 67.0 |
MS.gene85836.t1 | MTR_1g045510 | 25.610 | 164 | 116 | 3 | 27 | 185 | 115 | 277 | 3.48e-11 | 64.7 |
MS.gene85836.t1 | MTR_7g094660 | 30.851 | 188 | 113 | 7 | 115 | 288 | 643 | 827 | 3.90e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85836.t1 | AT1G22760 | 52.962 | 574 | 252 | 7 | 10 | 567 | 33 | 604 | 0.0 | 575 |
MS.gene85836.t1 | AT1G71770 | 51.585 | 568 | 251 | 7 | 24 | 569 | 58 | 623 | 0.0 | 553 |
MS.gene85836.t1 | AT1G71770 | 51.585 | 568 | 251 | 7 | 24 | 569 | 58 | 623 | 0.0 | 553 |
MS.gene85836.t1 | AT4G34110 | 55.579 | 466 | 186 | 6 | 2 | 451 | 16 | 476 | 3.97e-176 | 513 |
MS.gene85836.t1 | AT1G49760 | 50.707 | 566 | 254 | 9 | 26 | 569 | 46 | 608 | 4.85e-172 | 504 |
MS.gene85836.t1 | AT1G49760 | 50.707 | 566 | 254 | 9 | 26 | 569 | 46 | 608 | 4.85e-172 | 504 |
MS.gene85836.t1 | AT2G23350 | 49.734 | 563 | 259 | 10 | 25 | 574 | 46 | 597 | 7.30e-170 | 498 |
MS.gene85836.t1 | AT1G34140 | 54.270 | 363 | 154 | 5 | 83 | 443 | 1 | 353 | 4.51e-115 | 349 |
MS.gene85836.t1 | AT1G34140 | 31.802 | 283 | 173 | 4 | 26 | 290 | 32 | 312 | 4.77e-36 | 140 |
MS.gene85836.t1 | AT2G36660 | 43.457 | 405 | 225 | 3 | 25 | 427 | 24 | 426 | 1.23e-106 | 334 |
MS.gene85836.t1 | AT3G16380 | 42.266 | 459 | 234 | 11 | 26 | 476 | 22 | 457 | 1.30e-101 | 318 |
MS.gene85836.t1 | AT3G16380 | 35.602 | 191 | 107 | 4 | 19 | 194 | 196 | 385 | 9.44e-24 | 105 |
MS.gene85836.t1 | AT3G16380 | 32.642 | 193 | 114 | 4 | 196 | 387 | 17 | 194 | 3.48e-21 | 97.8 |
MS.gene85836.t1 | AT2G18510 | 37.079 | 178 | 109 | 3 | 19 | 194 | 19 | 195 | 3.98e-32 | 127 |
MS.gene85836.t1 | AT2G18510 | 29.947 | 187 | 110 | 6 | 202 | 385 | 27 | 195 | 4.10e-17 | 84.0 |
MS.gene85836.t1 | AT2G18510 | 25.143 | 175 | 125 | 5 | 113 | 282 | 25 | 198 | 2.15e-11 | 66.2 |
MS.gene85836.t1 | AT1G54080 | 28.205 | 273 | 150 | 7 | 26 | 261 | 64 | 327 | 5.87e-27 | 114 |
MS.gene85836.t1 | AT1G54080 | 27.931 | 290 | 167 | 9 | 105 | 367 | 55 | 329 | 5.37e-19 | 90.1 |
MS.gene85836.t1 | AT1G54080 | 29.508 | 183 | 107 | 6 | 201 | 381 | 64 | 226 | 9.19e-15 | 77.0 |
MS.gene85836.t1 | AT1G54080 | 28.159 | 277 | 149 | 8 | 26 | 261 | 64 | 331 | 1.82e-25 | 109 |
MS.gene85836.t1 | AT1G54080 | 27.891 | 294 | 166 | 10 | 105 | 367 | 55 | 333 | 1.25e-17 | 86.3 |
MS.gene85836.t1 | AT1G54080 | 29.412 | 187 | 106 | 7 | 201 | 381 | 64 | 230 | 2.10e-13 | 73.2 |
MS.gene85836.t1 | AT1G47490 | 30.741 | 270 | 154 | 10 | 23 | 264 | 99 | 363 | 1.04e-24 | 107 |
MS.gene85836.t1 | AT1G47490 | 23.565 | 331 | 218 | 11 | 115 | 432 | 103 | 411 | 4.36e-19 | 90.5 |
MS.gene85836.t1 | AT1G47490 | 29.381 | 194 | 109 | 5 | 17 | 187 | 185 | 373 | 2.34e-16 | 82.0 |
MS.gene85836.t1 | AT1G47500 | 30.370 | 270 | 155 | 10 | 23 | 264 | 101 | 365 | 1.18e-24 | 107 |
MS.gene85836.t1 | AT1G47500 | 23.263 | 331 | 219 | 11 | 115 | 432 | 105 | 413 | 4.71e-18 | 87.4 |
MS.gene85836.t1 | AT3G14100 | 26.740 | 273 | 154 | 6 | 26 | 261 | 60 | 323 | 5.71e-24 | 105 |
MS.gene85836.t1 | AT3G14100 | 27.881 | 269 | 164 | 9 | 114 | 361 | 60 | 319 | 5.10e-18 | 87.4 |
MS.gene85836.t1 | AT3G14100 | 30.601 | 183 | 105 | 6 | 201 | 381 | 60 | 222 | 7.10e-16 | 80.5 |
MS.gene85836.t1 | AT3G19130 | 27.703 | 296 | 170 | 9 | 26 | 282 | 109 | 399 | 1.57e-22 | 101 |
MS.gene85836.t1 | AT3G19130 | 25.837 | 209 | 141 | 5 | 202 | 407 | 110 | 307 | 2.01e-11 | 67.0 |
MS.gene85836.t1 | AT1G49600 | 28.763 | 299 | 174 | 10 | 18 | 282 | 112 | 405 | 4.28e-22 | 99.8 |
MS.gene85836.t1 | AT1G49600 | 23.642 | 313 | 196 | 10 | 115 | 397 | 121 | 420 | 4.82e-15 | 78.2 |
MS.gene85836.t1 | AT1G49600 | 27.419 | 310 | 185 | 10 | 18 | 292 | 112 | 416 | 7.63e-22 | 99.4 |
MS.gene85836.t1 | AT1G49600 | 24.272 | 309 | 193 | 10 | 115 | 398 | 121 | 413 | 1.26e-15 | 80.1 |
MS.gene85836.t1 | AT1G49600 | 27.419 | 310 | 185 | 10 | 18 | 292 | 112 | 416 | 7.63e-22 | 99.4 |
MS.gene85836.t1 | AT1G49600 | 24.272 | 309 | 193 | 10 | 115 | 398 | 121 | 413 | 1.26e-15 | 80.1 |
MS.gene85836.t1 | AT1G17370 | 27.037 | 270 | 154 | 8 | 26 | 261 | 55 | 315 | 1.66e-21 | 97.8 |
MS.gene85836.t1 | AT1G17370 | 26.667 | 270 | 171 | 9 | 114 | 365 | 55 | 315 | 1.38e-17 | 85.9 |
MS.gene85836.t1 | AT1G17370 | 26.923 | 182 | 113 | 5 | 201 | 381 | 55 | 217 | 1.24e-12 | 70.5 |
MS.gene85836.t1 | AT1G17370 | 26.740 | 273 | 154 | 8 | 26 | 261 | 55 | 318 | 4.85e-21 | 96.3 |
MS.gene85836.t1 | AT1G17370 | 26.740 | 273 | 170 | 8 | 114 | 365 | 55 | 318 | 7.08e-17 | 83.6 |
MS.gene85836.t1 | AT1G17370 | 26.923 | 182 | 113 | 5 | 201 | 381 | 55 | 217 | 1.30e-12 | 70.5 |
MS.gene85836.t1 | AT2G37220 | 30.645 | 186 | 101 | 3 | 27 | 185 | 93 | 277 | 1.02e-19 | 90.5 |
MS.gene85836.t1 | AT5G54900 | 25.000 | 268 | 161 | 9 | 26 | 263 | 61 | 318 | 4.09e-19 | 90.1 |
MS.gene85836.t1 | AT5G54900 | 23.569 | 297 | 191 | 9 | 114 | 390 | 61 | 341 | 3.32e-17 | 84.3 |
MS.gene85836.t1 | AT5G54900 | 24.352 | 193 | 128 | 6 | 195 | 382 | 55 | 234 | 9.53e-11 | 64.3 |
MS.gene85836.t1 | AT5G50250 | 30.556 | 180 | 116 | 3 | 23 | 194 | 111 | 289 | 1.37e-18 | 87.0 |
MS.gene85836.t1 | AT5G50250 | 28.796 | 191 | 123 | 4 | 197 | 385 | 110 | 289 | 5.35e-15 | 76.3 |
MS.gene85836.t1 | AT5G50250 | 28.652 | 178 | 118 | 4 | 113 | 282 | 113 | 289 | 4.97e-13 | 70.5 |
MS.gene85836.t1 | AT1G11650 | 24.028 | 283 | 184 | 8 | 5 | 262 | 42 | 318 | 1.52e-18 | 88.6 |
MS.gene85836.t1 | AT1G11650 | 23.054 | 334 | 212 | 10 | 114 | 432 | 63 | 366 | 4.40e-15 | 78.2 |
MS.gene85836.t1 | AT4G27000 | 25.188 | 266 | 161 | 8 | 26 | 263 | 81 | 336 | 5.07e-18 | 87.0 |
MS.gene85836.t1 | AT4G27000 | 23.129 | 294 | 190 | 10 | 114 | 388 | 81 | 357 | 3.99e-16 | 81.3 |
MS.gene85836.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 1.07e-17 | 85.1 |
MS.gene85836.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 3.37e-17 | 83.6 |
MS.gene85836.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 1.07e-17 | 85.1 |
MS.gene85836.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 3.37e-17 | 83.6 |
MS.gene85836.t1 | AT1G01080 | 32.124 | 193 | 111 | 6 | 107 | 281 | 102 | 292 | 3.10e-17 | 83.2 |
MS.gene85836.t1 | AT1G01080 | 28.070 | 171 | 114 | 6 | 197 | 362 | 105 | 271 | 2.20e-11 | 65.5 |
MS.gene85836.t1 | AT5G19350 | 23.358 | 274 | 171 | 6 | 23 | 262 | 22 | 290 | 5.33e-17 | 84.0 |
MS.gene85836.t1 | AT5G19350 | 21.724 | 290 | 198 | 9 | 114 | 380 | 25 | 308 | 1.02e-16 | 83.2 |
MS.gene85836.t1 | AT5G19350 | 24.373 | 279 | 166 | 7 | 23 | 262 | 22 | 294 | 1.57e-16 | 82.8 |
MS.gene85836.t1 | AT1G01080 | 31.959 | 194 | 111 | 6 | 107 | 281 | 102 | 293 | 1.11e-16 | 81.3 |
MS.gene85836.t1 | AT1G01080 | 27.907 | 172 | 114 | 6 | 197 | 362 | 105 | 272 | 4.45e-11 | 64.7 |
MS.gene85836.t1 | AT2G35410 | 28.495 | 186 | 118 | 5 | 202 | 381 | 97 | 273 | 2.68e-16 | 80.5 |
MS.gene85836.t1 | AT2G35410 | 28.221 | 163 | 101 | 3 | 115 | 262 | 97 | 258 | 1.47e-13 | 72.4 |
MS.gene85836.t1 | AT1G11650 | 23.507 | 268 | 174 | 8 | 5 | 247 | 42 | 303 | 3.15e-16 | 80.5 |
MS.gene85836.t1 | AT1G11650 | 22.177 | 248 | 178 | 6 | 114 | 352 | 63 | 304 | 4.97e-11 | 64.7 |
MS.gene85836.t1 | AT5G41690 | 18.652 | 445 | 271 | 8 | 26 | 380 | 69 | 512 | 8.65e-16 | 81.3 |
MS.gene85836.t1 | AT5G41690 | 18.652 | 445 | 271 | 8 | 26 | 380 | 69 | 512 | 8.65e-16 | 81.3 |
MS.gene85836.t1 | AT5G41690 | 18.652 | 445 | 271 | 8 | 26 | 380 | 69 | 512 | 8.65e-16 | 81.3 |
MS.gene85836.t1 | AT3G52150 | 32.749 | 171 | 107 | 5 | 202 | 369 | 78 | 243 | 1.31e-15 | 77.4 |
MS.gene85836.t1 | AT3G52150 | 26.437 | 174 | 112 | 4 | 27 | 185 | 78 | 250 | 5.12e-12 | 67.0 |
MS.gene85836.t1 | AT3G52150 | 32.749 | 171 | 107 | 5 | 202 | 369 | 78 | 243 | 1.31e-15 | 77.4 |
MS.gene85836.t1 | AT3G52150 | 26.437 | 174 | 112 | 4 | 27 | 185 | 78 | 250 | 5.12e-12 | 67.0 |
MS.gene85836.t1 | AT1G47500 | 28.272 | 191 | 120 | 7 | 23 | 203 | 101 | 284 | 3.02e-15 | 77.4 |
MS.gene85836.t1 | AT1G01080 | 31.818 | 176 | 101 | 5 | 107 | 264 | 102 | 276 | 4.91e-15 | 76.3 |
MS.gene85836.t1 | AT1G01080 | 28.962 | 183 | 118 | 8 | 197 | 372 | 105 | 282 | 8.62e-12 | 66.6 |
MS.gene85836.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 6.41e-15 | 78.2 |
MS.gene85836.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 3.00e-14 | 75.9 |
MS.gene85836.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 6.41e-15 | 78.2 |
MS.gene85836.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 3.00e-14 | 75.9 |
MS.gene85836.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 6.41e-15 | 78.2 |
MS.gene85836.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 3.00e-14 | 75.9 |
MS.gene85836.t1 | AT1G47490 | 28.796 | 191 | 119 | 7 | 23 | 203 | 99 | 282 | 8.58e-15 | 76.3 |
MS.gene85836.t1 | AT1G47490 | 29.825 | 171 | 103 | 5 | 225 | 391 | 129 | 286 | 1.44e-11 | 66.2 |
MS.gene85836.t1 | AT3G52380 | 25.134 | 187 | 124 | 3 | 23 | 193 | 114 | 300 | 9.61e-15 | 76.3 |
MS.gene85836.t1 | AT1G60000 | 27.976 | 168 | 114 | 3 | 24 | 185 | 84 | 250 | 1.87e-14 | 74.3 |
MS.gene85836.t1 | AT4G00830 | 26.217 | 267 | 170 | 7 | 25 | 282 | 116 | 364 | 8.80e-14 | 74.3 |
MS.gene85836.t1 | AT4G00830 | 23.188 | 276 | 184 | 6 | 113 | 386 | 116 | 365 | 4.00e-13 | 72.4 |
MS.gene85836.t1 | AT4G00830 | 26.217 | 267 | 170 | 7 | 25 | 282 | 116 | 364 | 8.80e-14 | 74.3 |
MS.gene85836.t1 | AT4G00830 | 23.188 | 276 | 184 | 6 | 113 | 386 | 116 | 365 | 4.00e-13 | 72.4 |
MS.gene85836.t1 | AT1G45100 | 25.763 | 295 | 164 | 7 | 22 | 267 | 155 | 443 | 1.90e-13 | 73.6 |
MS.gene85836.t1 | AT5G47620 | 27.835 | 194 | 111 | 7 | 202 | 369 | 8 | 198 | 2.70e-13 | 72.8 |
MS.gene85836.t1 | AT5G47620 | 27.624 | 181 | 106 | 7 | 202 | 369 | 8 | 176 | 3.20e-13 | 72.4 |
MS.gene85836.t1 | AT5G47620 | 28.655 | 171 | 94 | 8 | 115 | 262 | 8 | 173 | 1.95e-11 | 67.0 |
MS.gene85836.t1 | AT5G47620 | 27.624 | 181 | 106 | 7 | 202 | 369 | 8 | 176 | 3.20e-13 | 72.4 |
MS.gene85836.t1 | AT5G47620 | 28.655 | 171 | 94 | 8 | 115 | 262 | 8 | 173 | 1.95e-11 | 67.0 |
MS.gene85836.t1 | AT5G47620 | 27.624 | 181 | 106 | 7 | 202 | 369 | 8 | 176 | 3.20e-13 | 72.4 |
MS.gene85836.t1 | AT5G47620 | 28.655 | 171 | 94 | 8 | 115 | 262 | 8 | 173 | 1.95e-11 | 67.0 |
MS.gene85836.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 4.62e-13 | 72.4 |
MS.gene85836.t1 | AT3G07810 | 26.286 | 175 | 118 | 5 | 202 | 369 | 8 | 178 | 2.65e-11 | 66.6 |
MS.gene85836.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 4.78e-13 | 72.0 |
MS.gene85836.t1 | AT3G07810 | 26.286 | 175 | 118 | 5 | 202 | 369 | 8 | 178 | 2.36e-11 | 67.0 |
MS.gene85836.t1 | AT4G00830 | 23.214 | 280 | 187 | 7 | 113 | 386 | 116 | 373 | 5.09e-13 | 72.0 |
MS.gene85836.t1 | AT4G00830 | 25.556 | 270 | 176 | 8 | 25 | 282 | 116 | 372 | 5.49e-11 | 65.9 |
MS.gene85836.t1 | AT1G17640 | 26.230 | 183 | 119 | 4 | 202 | 382 | 68 | 236 | 5.76e-13 | 71.2 |
MS.gene85836.t1 | AT1G17640 | 26.230 | 183 | 119 | 4 | 202 | 382 | 68 | 236 | 5.76e-13 | 71.2 |
MS.gene85836.t1 | AT1G17640 | 26.230 | 183 | 119 | 4 | 202 | 382 | 68 | 236 | 5.76e-13 | 71.2 |
MS.gene85836.t1 | AT2G47310 | 26.396 | 197 | 133 | 4 | 202 | 394 | 112 | 300 | 5.96e-13 | 72.0 |
MS.gene85836.t1 | AT4G16280 | 25.967 | 181 | 128 | 3 | 115 | 289 | 122 | 302 | 1.18e-12 | 71.2 |
MS.gene85836.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 6.61e-12 | 68.6 |
MS.gene85836.t1 | AT4G16280 | 25.455 | 220 | 138 | 7 | 175 | 388 | 99 | 298 | 7.54e-12 | 68.6 |
MS.gene85836.t1 | AT4G36960 | 32.278 | 158 | 98 | 5 | 115 | 265 | 5 | 160 | 1.47e-12 | 70.1 |
MS.gene85836.t1 | AT4G36960 | 32.278 | 158 | 98 | 5 | 115 | 265 | 5 | 160 | 1.47e-12 | 70.1 |
MS.gene85836.t1 | AT4G16280 | 25.967 | 181 | 128 | 3 | 115 | 289 | 47 | 227 | 1.77e-12 | 70.9 |
MS.gene85836.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 41 | 198 | 7.60e-12 | 68.9 |
MS.gene85836.t1 | AT4G16280 | 25.455 | 220 | 138 | 7 | 175 | 388 | 24 | 223 | 1.20e-11 | 68.2 |
MS.gene85836.t1 | AT4G16280 | 25.967 | 181 | 128 | 3 | 115 | 289 | 122 | 302 | 1.95e-12 | 70.9 |
MS.gene85836.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 9.89e-12 | 68.6 |
MS.gene85836.t1 | AT4G16280 | 25.455 | 220 | 138 | 7 | 175 | 388 | 99 | 298 | 1.24e-11 | 68.2 |
MS.gene85836.t1 | AT5G03580 | 36.250 | 80 | 51 | 0 | 305 | 384 | 18 | 97 | 3.26e-12 | 63.5 |
MS.gene85836.t1 | AT2G44710 | 24.169 | 331 | 212 | 13 | 108 | 430 | 124 | 423 | 3.95e-12 | 69.7 |
MS.gene85836.t1 | AT2G44710 | 20.079 | 254 | 184 | 6 | 27 | 269 | 131 | 376 | 4.16e-12 | 69.7 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 4.28e-12 | 68.9 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 4.28e-12 | 68.9 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 4.28e-12 | 68.9 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 4.28e-12 | 68.9 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 4.28e-12 | 68.9 |
MS.gene85836.t1 | AT2G44710 | 24.169 | 331 | 212 | 13 | 108 | 430 | 209 | 508 | 5.89e-12 | 69.3 |
MS.gene85836.t1 | AT2G44710 | 20.079 | 254 | 184 | 6 | 27 | 269 | 216 | 461 | 7.24e-12 | 68.9 |
MS.gene85836.t1 | AT2G44710 | 24.169 | 331 | 212 | 13 | 108 | 430 | 209 | 508 | 5.89e-12 | 69.3 |
MS.gene85836.t1 | AT2G44710 | 20.079 | 254 | 184 | 6 | 27 | 269 | 216 | 461 | 7.24e-12 | 68.9 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.17e-12 | 68.6 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.17e-12 | 68.6 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.17e-12 | 68.6 |
MS.gene85836.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.17e-12 | 68.6 |
MS.gene85836.t1 | AT2G33410 | 29.630 | 189 | 101 | 7 | 115 | 279 | 8 | 188 | 8.23e-12 | 67.8 |
MS.gene85836.t1 | AT3G46020 | 31.111 | 90 | 61 | 1 | 304 | 392 | 7 | 96 | 9.57e-12 | 62.4 |
MS.gene85836.t1 | AT4G26650 | 25.263 | 190 | 132 | 5 | 189 | 369 | 1 | 189 | 2.06e-11 | 67.0 |
MS.gene85836.t1 | AT2G37510 | 39.474 | 76 | 45 | 1 | 295 | 369 | 25 | 100 | 2.32e-11 | 62.4 |
MS.gene85836.t1 | AT4G26650 | 26.087 | 184 | 126 | 5 | 195 | 369 | 10 | 192 | 2.44e-11 | 66.6 |
MS.gene85836.t1 | AT4G03110 | 25.101 | 247 | 147 | 8 | 200 | 438 | 18 | 234 | 3.67e-11 | 65.9 |
MS.gene85836.t1 | AT1G58470 | 27.099 | 262 | 135 | 10 | 202 | 440 | 8 | 236 | 3.96e-11 | 65.5 |
MS.gene85836.t1 | AT1G58470 | 27.099 | 262 | 135 | 10 | 202 | 440 | 8 | 236 | 3.96e-11 | 65.5 |
MS.gene85836.t1 | AT4G03110 | 43.210 | 81 | 45 | 1 | 299 | 378 | 344 | 424 | 4.11e-11 | 65.9 |
MS.gene85836.t1 | AT3G52660 | 23.651 | 241 | 172 | 5 | 25 | 258 | 92 | 327 | 4.75e-11 | 65.9 |
MS.gene85836.t1 | AT3G52660 | 23.651 | 241 | 172 | 5 | 25 | 258 | 92 | 327 | 4.75e-11 | 65.9 |
MS.gene85836.t1 | AT3G52660 | 23.651 | 241 | 172 | 5 | 25 | 258 | 92 | 327 | 4.75e-11 | 65.9 |
MS.gene85836.t1 | AT3G23830 | 36.250 | 80 | 50 | 1 | 304 | 382 | 35 | 114 | 5.21e-11 | 61.2 |
MS.gene85836.t1 | AT3G23830 | 36.250 | 80 | 50 | 1 | 304 | 382 | 35 | 114 | 5.21e-11 | 61.2 |
MS.gene85836.t1 | AT4G14300 | 26.946 | 167 | 110 | 7 | 212 | 369 | 17 | 180 | 8.96e-11 | 64.7 |
MS.gene85836.t1 | AT4G14300 | 26.946 | 167 | 110 | 7 | 212 | 369 | 17 | 180 | 8.96e-11 | 64.7 |
MS.gene85836.t1 | AT3G04500 | 34.409 | 93 | 57 | 2 | 306 | 394 | 139 | 231 | 9.43e-11 | 62.8 |
Find 129 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATGACATACCGCTTTAC+TGG | 0.235434 | 6.4:-14841544 | None:intergenic |
TTGCTCCAGTGGTTTCTGTT+AGG | 0.261932 | 6.4:+14839599 | MS.gene85836:CDS |
AACGGGAACTCTAAATGTTT+TGG | 0.290568 | 6.4:+14841028 | MS.gene85836:CDS |
GCCGTTGGAACCACTATCTT+TGG | 0.291556 | 6.4:-14839478 | None:intergenic |
GATCCTCTCATTCGGAAAAC+TGG | 0.296987 | 6.4:+14840632 | MS.gene85836:CDS |
AATGGTCAATCTAGGGGATT+TGG | 0.306755 | 6.4:+14840767 | MS.gene85836:CDS |
TTTGCTGCTGTCGTACTTGC+TGG | 0.311732 | 6.4:-14842393 | None:intergenic |
TGGACATGTGCTTTCTTGTA+AGG | 0.312279 | 6.4:+14840730 | MS.gene85836:CDS |
TCTAAATACAATGGTCAAAA+TGG | 0.321666 | 6.4:+14842540 | MS.gene85836:CDS |
TGATATGGCTGGATGTAATT+TGG | 0.337632 | 6.4:-14842313 | None:intergenic |
TTGGGCCACAGAAACATATA+AGG | 0.339551 | 6.4:-14841686 | None:intergenic |
AAACTCACTTGCTTCAACTT+TGG | 0.343816 | 6.4:+14842659 | MS.gene85836:CDS |
CCCTGCCTCTGAAGGTGATA+TGG | 0.344309 | 6.4:-14842328 | None:intergenic |
TGCTCCAGTGGTTTCTGTTA+GGG | 0.357944 | 6.4:+14839600 | MS.gene85836:CDS |
TTGAACTATGTTACTCTGAA+TGG | 0.368953 | 6.4:+14840578 | MS.gene85836:CDS |
ACCTTTGATGTCTGATTGCT+TGG | 0.371815 | 6.4:-14842858 | None:intergenic |
TGGATAGCAATGGTCAATCT+AGG | 0.378409 | 6.4:+14840759 | MS.gene85836:CDS |
TGTATTTAGACCCTTGGTTC+AGG | 0.379175 | 6.4:-14842527 | None:intergenic |
TATTATGGGCAAGGTACATT+TGG | 0.380004 | 6.4:+14842214 | MS.gene85836:CDS |
GACCATTGTATTTAGACCCT+TGG | 0.384743 | 6.4:-14842533 | None:intergenic |
CAAGTCTTTGTACACTTGAA+TGG | 0.399309 | 6.4:-14842177 | None:intergenic |
CTCATCGAGATCCTCTCATT+CGG | 0.404413 | 6.4:+14840624 | MS.gene85836:CDS |
CCAACGGCTTTGACCGGTGC+TGG | 0.405111 | 6.4:+14839493 | MS.gene85836:CDS |
CTTTCCTGTCCTCTTTGCGT+TGG | 0.419707 | 6.4:-14841705 | None:intergenic |
TTTCCTGTCCTCTTTGCGTT+GGG | 0.420351 | 6.4:-14841704 | None:intergenic |
TTCCAGCCACAGTTCATGTT+AGG | 0.422595 | 6.4:+14842268 | MS.gene85836:CDS |
AAGTCTTTGTACACTTGAAT+GGG | 0.431633 | 6.4:-14842176 | None:intergenic |
TGGATTCATCGTTTGACTGC+CGG | 0.438493 | 6.4:-14842583 | None:intergenic |
GGACAGGAAAGCTCAATTGC+AGG | 0.441542 | 6.4:+14841717 | MS.gene85836:CDS |
GGATTCATCGTTTGACTGCC+GGG | 0.445707 | 6.4:-14842582 | None:intergenic |
CAGAAACCACTGGAGCAATC+TGG | 0.446450 | 6.4:-14839594 | None:intergenic |
TTGTACGTTGGTGATCTTGA+AGG | 0.446826 | 6.4:+14839535 | MS.gene85836:CDS |
GAAATGAATGGAAAGATGAT+TGG | 0.448870 | 6.4:+14841655 | MS.gene85836:CDS |
CACCTAACATGAACTGTGGC+TGG | 0.452510 | 6.4:-14842270 | None:intergenic |
TGATGCTCGTGGCCGTAGCA+AGG | 0.453334 | 6.4:+14841485 | MS.gene85836:CDS |
TCGCCTCAGCCAAACGGATA+CGG | 0.457960 | 6.4:+14842244 | MS.gene85836:CDS |
ATTGAGGCGATTCGATTCCT+TGG | 0.460513 | 6.4:+14842882 | MS.gene85836:CDS |
GATTTCATCACCAAAGATAG+TGG | 0.460581 | 6.4:+14839468 | MS.gene85836:CDS |
CGTGGCCGTAGCAAGGGCTT+CGG | 0.462959 | 6.4:+14841492 | MS.gene85836:CDS |
CTCGATGTCCCTGCCTCTGA+AGG | 0.465894 | 6.4:-14842336 | None:intergenic |
TAGCTGCTGAATCTGAGCTT+TGG | 0.466989 | 6.4:-14841063 | None:intergenic |
GCCTCTGAAGGTGATATGGC+TGG | 0.468011 | 6.4:-14842324 | None:intergenic |
TTCATGTTAGGTGTTGGAAC+TGG | 0.470772 | 6.4:+14842280 | MS.gene85836:CDS |
GCCATATCACCTTCAGAGGC+AGG | 0.471754 | 6.4:+14842327 | MS.gene85836:CDS |
TGATAATGAAAGATAAGAAC+GGG | 0.472074 | 6.4:+14841011 | MS.gene85836:CDS |
AGAACATTTATATCCTCTGC+TGG | 0.472397 | 6.4:+14842824 | MS.gene85836:CDS |
TACTAAAGAAAATCAACATC+GGG | 0.474307 | 6.4:+14842689 | MS.gene85836:CDS |
GGCTGGAAACCGTATCCGTT+TGG | 0.476240 | 6.4:-14842253 | None:intergenic |
AATGGGACCACAACTAATGA+TGG | 0.477121 | 6.4:+14841103 | MS.gene85836:CDS |
GGCTTCCTCAGAAGTAGAAA+AGG | 0.477831 | 6.4:-14841523 | None:intergenic |
GCTTTCTTGTAAGGTTGCTA+TGG | 0.481734 | 6.4:+14840739 | MS.gene85836:CDS |
AATGATAAGAAAGTTTATGT+AGG | 0.485281 | 6.4:+14840857 | MS.gene85836:CDS |
CTCATTTCGCCTCAGCCAAA+CGG | 0.486466 | 6.4:+14842238 | MS.gene85836:CDS |
GGCAGGGACATCGAGGGAAT+AGG | 0.496250 | 6.4:+14842344 | MS.gene85836:CDS |
GGATAGCAATGGTCAATCTA+GGG | 0.497370 | 6.4:+14840760 | MS.gene85836:CDS |
GACCCTTGGTTCAGGTTATG+AGG | 0.497463 | 6.4:-14842519 | None:intergenic |
ACATACACGTTAGTGAACTT+AGG | 0.505696 | 6.4:-14840911 | None:intergenic |
AGGATGGGTGGGCGTCCAGC+AGG | 0.506024 | 6.4:+14842364 | MS.gene85836:CDS |
CATCGAGGGAATAGGATGGG+TGG | 0.507712 | 6.4:+14842352 | MS.gene85836:CDS |
AAGTGTTGAAAAGCTGCTTA+AGG | 0.508202 | 6.4:-14840967 | None:intergenic |
TGAGAAAACATAATACGAAT+GGG | 0.509410 | 6.4:-14840605 | None:intergenic |
AACTTCTCCAATGCTCGTGA+TGG | 0.509824 | 6.4:+14839670 | MS.gene85836:CDS |
GTGGTTCCAACGGCTTTGAC+CGG | 0.514270 | 6.4:+14839487 | MS.gene85836:CDS |
ATACAAACCATCACGAGCAT+TGG | 0.514373 | 6.4:-14839677 | None:intergenic |
ACCATGACGGTGATTGTCAA+TGG | 0.518236 | 6.4:-14842625 | None:intergenic |
CCACAGTTCATGTTAGGTGT+TGG | 0.519887 | 6.4:+14842274 | MS.gene85836:CDS |
ATGAGAAAACATAATACGAA+TGG | 0.522254 | 6.4:-14840606 | None:intergenic |
CATCAGTATATGCTTCAGAA+AGG | 0.523204 | 6.4:-14840940 | None:intergenic |
GATGCTCGTGGCCGTAGCAA+GGG | 0.526704 | 6.4:+14841486 | MS.gene85836:CDS |
ATGATAAGAAAGTTTATGTA+GGG | 0.526737 | 6.4:+14840858 | MS.gene85836:CDS |
ATACAGTCATCTCTTGGCTA+TGG | 0.528110 | 6.4:+14839640 | MS.gene85836:CDS |
GTTCAGCCAGATTGCTCCAG+TGG | 0.530685 | 6.4:+14839588 | MS.gene85836:CDS |
ACTGCTGTTGAGAAGTTGAA+TGG | 0.532720 | 6.4:+14841085 | MS.gene85836:CDS |
CAGATGATACAGTCATCTCT+TGG | 0.533145 | 6.4:+14839634 | MS.gene85836:CDS |
GAGGTTGCAGCACTTGCAGA+TGG | 0.534402 | 6.4:-14842603 | None:intergenic |
ACTTGCTGGAATTTACCTGC+TGG | 0.538259 | 6.4:-14842379 | None:intergenic |
CTGCTGTTGAGAAGTTGAAT+GGG | 0.538447 | 6.4:+14841086 | MS.gene85836:CDS |
TGGCCCAACGCAAAGAGGAC+AGG | 0.543729 | 6.4:+14841701 | MS.gene85836:CDS |
CCAGCACCGGTCAAAGCCGT+TGG | 0.547983 | 6.4:-14839493 | None:intergenic |
TCAGACATCAAAGGTGATTG+AGG | 0.554226 | 6.4:+14842866 | MS.gene85836:CDS |
AACCTTCCCATCATTAGTTG+TGG | 0.559527 | 6.4:-14841110 | None:intergenic |
TGTACGTTGGTGATCTTGAA+GGG | 0.569691 | 6.4:+14839536 | MS.gene85836:CDS |
ATCGAGGGAATAGGATGGGT+GGG | 0.570681 | 6.4:+14842353 | MS.gene85836:CDS |
TGGAACAATAACATCTTGCA+AGG | 0.572033 | 6.4:+14841303 | MS.gene85836:CDS |
TGCCCATAATAAAATTGTTG+CGG | 0.575659 | 6.4:-14842202 | None:intergenic |
AAACCGTATCCGTTTGGCTG+AGG | 0.576720 | 6.4:-14842247 | None:intergenic |
CCAATGTGATTACGAACTGC+AGG | 0.577917 | 6.4:-14842921 | None:intergenic |
ATTCTCAAATCTTCCAGCAC+CGG | 0.579811 | 6.4:-14839506 | None:intergenic |
CTACTAAAGAAAATCAACAT+CGG | 0.581357 | 6.4:+14842688 | MS.gene85836:CDS |
TGCGGCAGCTGCTAATGCGA+TGG | 0.584096 | 6.4:+14840550 | MS.gene85836:intron |
GTGATAATGAAAGATAAGAA+CGG | 0.585610 | 6.4:+14841010 | MS.gene85836:CDS |
TGGGCCACAGAAACATATAA+GGG | 0.593978 | 6.4:-14841685 | None:intergenic |
AAAAGATATGAGAAATTACA+AGG | 0.594728 | 6.4:+14841208 | MS.gene85836:CDS |
GGGACATCGAGGGAATAGGA+TGG | 0.597122 | 6.4:+14842348 | MS.gene85836:CDS |
TCTTGAAGGGAACGTGAATG+AGG | 0.601096 | 6.4:+14839549 | MS.gene85836:CDS |
TCCAGCCATATCACCTTCAG+AGG | 0.601841 | 6.4:+14842323 | MS.gene85836:CDS |
CAAAACCGAAGCCCTTGCTA+CGG | 0.604667 | 6.4:-14841497 | None:intergenic |
GTGGATACGTCTGTAGATCC+CGG | 0.606506 | 6.4:+14842564 | MS.gene85836:CDS |
TAAGCCCTTATATGTTTCTG+TGG | 0.606849 | 6.4:+14841681 | MS.gene85836:CDS |
TTCCTTGGTGAAGCTTCAAG+AGG | 0.611698 | 6.4:+14842897 | MS.gene85836:CDS |
TCCATTGACAATCACCGTCA+TGG | 0.612971 | 6.4:+14842624 | MS.gene85836:CDS |
GAACATTTATATCCTCTGCT+GGG | 0.614538 | 6.4:+14842825 | MS.gene85836:CDS |
ATACAATGGTCAAAATGGCG+TGG | 0.615038 | 6.4:+14842545 | MS.gene85836:CDS |
GGACATCGAGGGAATAGGAT+GGG | 0.619886 | 6.4:+14842349 | MS.gene85836:CDS |
GACCACAACTAATGATGGGA+AGG | 0.621274 | 6.4:+14841108 | MS.gene85836:CDS |
CAAACCCTAACAGAAACCAC+TGG | 0.623004 | 6.4:-14839604 | None:intergenic |
TTCTGTGGCCCAACGCAAAG+AGG | 0.624780 | 6.4:+14841696 | MS.gene85836:CDS |
AGAAACATCAATAGATAACA+AGG | 0.626663 | 6.4:+14840682 | MS.gene85836:CDS |
ACCAAAGATAGTGGTTCCAA+CGG | 0.628784 | 6.4:+14839477 | MS.gene85836:CDS |
CCATATCACCTTCAGAGGCA+GGG | 0.629042 | 6.4:+14842328 | MS.gene85836:CDS |
TTCTGAAGCATATACTGATG+AGG | 0.630877 | 6.4:+14840943 | MS.gene85836:CDS |
AACCAAGGGTCTAAATACAA+TGG | 0.633595 | 6.4:+14842531 | MS.gene85836:CDS |
ATGGGACCACAACTAATGAT+GGG | 0.633994 | 6.4:+14841104 | MS.gene85836:CDS |
TCTGCAATTCAAGTATCGGG+TGG | 0.637021 | 6.4:+14842142 | MS.gene85836:CDS |
CAGGTAATGTCTGATGCTCG+TGG | 0.638564 | 6.4:+14841474 | MS.gene85836:intron |
GGTGTAAGACGACCCAGCAG+AGG | 0.642146 | 6.4:-14842837 | None:intergenic |
GATAGCAATGGTCAATCTAG+GGG | 0.648957 | 6.4:+14840761 | MS.gene85836:CDS |
AAGGTTGCTATGGATAGCAA+TGG | 0.649706 | 6.4:+14840749 | MS.gene85836:CDS |
CCTGCAGTTCGTAATCACAT+TGG | 0.649736 | 6.4:+14842921 | MS.gene85836:CDS |
TTCAGAGGCAGGGACATCGA+GGG | 0.651455 | 6.4:+14842338 | MS.gene85836:CDS |
CGACCTCATAACCTGAACCA+AGG | 0.652239 | 6.4:+14842516 | MS.gene85836:CDS |
GAGAATGCTTCATTGTACGT+TGG | 0.652942 | 6.4:+14839523 | MS.gene85836:CDS |
CTTCAGAGGCAGGGACATCG+AGG | 0.656911 | 6.4:+14842337 | MS.gene85836:CDS |
ACCAAGCAATCAGACATCAA+AGG | 0.661183 | 6.4:+14842857 | MS.gene85836:CDS |
GACCTCATAACCTGAACCAA+GGG | 0.661274 | 6.4:+14842517 | MS.gene85836:CDS |
GACCTCTTGAAGCTTCACCA+AGG | 0.662786 | 6.4:-14842899 | None:intergenic |
TTCTGAGGAAGCCAGTAAAG+CGG | 0.665676 | 6.4:+14841533 | MS.gene85836:CDS |
ATGACGGTGATTGTCAATGG+AGG | 0.724574 | 6.4:-14842622 | None:intergenic |
CCAACACCTAACATGAACTG+TGG | 0.743437 | 6.4:-14842274 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAAAAAAAAAATTCAATA+AGG | - | chr6.4:14839853-14839872 | None:intergenic | 10.0% |
!!! | ATATATTCTTTTTTTTTTTG+AGG | + | chr6.4:14839780-14839799 | MS.gene85836:intron | 10.0% |
!!! | TATATTCTTTTTTTTTTTGA+GGG | + | chr6.4:14839781-14839800 | MS.gene85836:intron | 10.0% |
!!! | TTGAATTTTTTTTTTTTGTT+TGG | + | chr6.4:14839855-14839874 | MS.gene85836:intron | 10.0% |
!! | AAAAAATAATTCTTTCAACA+TGG | - | chr6.4:14840225-14840244 | None:intergenic | 15.0% |
!! | AAAACATGATTATAAATACT+AGG | - | chr6.4:14839994-14840013 | None:intergenic | 15.0% |
!! | AAACATGATTATAAATACTA+GGG | - | chr6.4:14839993-14840012 | None:intergenic | 15.0% |
!! | AAATTTAATATTTCAGCAAA+TGG | - | chr6.4:14841854-14841873 | None:intergenic | 15.0% |
!! | AACAAAAAAACTTAGATTTA+CGG | - | chr6.4:14842433-14842452 | None:intergenic | 15.0% |
!! | TTAAATACTAATGTCAAATA+GGG | - | chr6.4:14840113-14840132 | None:intergenic | 15.0% |
!! | TTAACCACATTATAATTATA+AGG | - | chr6.4:14841785-14841804 | None:intergenic | 15.0% |
!! | TTGAATAATATTTGTATCTT+TGG | + | chr6.4:14841343-14841362 | MS.gene85836:intron | 15.0% |
!! | TTTACTATTTCAGAAAAAAT+AGG | - | chr6.4:14839969-14839988 | None:intergenic | 15.0% |
!!! | ATATTCTTTTTTTTTTTGAG+GGG | + | chr6.4:14839782-14839801 | MS.gene85836:intron | 15.0% |
!!! | TATATATTATAGTAGTTTTG+AGG | + | chr6.4:14840343-14840362 | MS.gene85836:intron | 15.0% |
!! | AAAAATTGCCATTGAAAAAT+TGG | + | chr6.4:14840820-14840839 | MS.gene85836:CDS | 20.0% |
!! | AAAAGATATGAGAAATTACA+AGG | + | chr6.4:14841208-14841227 | MS.gene85836:CDS | 20.0% |
!! | AATGATAAGAAAGTTTATGT+AGG | + | chr6.4:14840857-14840876 | MS.gene85836:CDS | 20.0% |
!! | ATGATAAGAAAGTTTATGTA+GGG | + | chr6.4:14840858-14840877 | MS.gene85836:CDS | 20.0% |
!! | ATTATTTATACAGTACGATT+TGG | + | chr6.4:14841809-14841828 | MS.gene85836:intron | 20.0% |
!! | CTTAAATACTAATGTCAAAT+AGG | - | chr6.4:14840114-14840133 | None:intergenic | 20.0% |
!! | TATACTTAAAAAACATTGAC+AGG | + | chr6.4:14841239-14841258 | MS.gene85836:CDS | 20.0% |
!! | TATTATAATCACACACAAAA+AGG | - | chr6.4:14839763-14839782 | None:intergenic | 20.0% |
!! | TCATAAAAAGAGGTTATATT+TGG | - | chr6.4:14841598-14841617 | None:intergenic | 20.0% |
!! | TCTTAATGATGAAAAATTGA+AGG | + | chr6.4:14841264-14841283 | MS.gene85836:CDS | 20.0% |
!! | TGTATTTAATATGTTTCTTC+AGG | + | chr6.4:14841455-14841474 | MS.gene85836:intron | 20.0% |
!! | TTAACTTCAAAAAAATTGTG+CGG | + | chr6.4:14840532-14840551 | MS.gene85836:intron | 20.0% |
!! | TTCACCTTATAATTATAATG+TGG | + | chr6.4:14841778-14841797 | MS.gene85836:intron | 20.0% |
!! | TTTGGAGAGAAAAAAAATAA+CGG | + | chr6.4:14839873-14839892 | MS.gene85836:intron | 20.0% |
!!! | ATATAGCTTCAAAATTCTTT+TGG | - | chr6.4:14840328-14840347 | None:intergenic | 20.0% |
!!! | TATTCTTTTTTTTTTTGAGG+GGG | + | chr6.4:14839783-14839802 | MS.gene85836:intron | 20.0% |
!!! | TCTTTTTATTTATGAGTTGT+AGG | + | chr6.4:14840188-14840207 | MS.gene85836:intron | 20.0% |
!!! | TTTTAGATCAATGAAATGAA+TGG | + | chr6.4:14841643-14841662 | MS.gene85836:intron | 20.0% |
! | AATTCAACAGTTAGATTTAC+AGG | + | chr6.4:14842095-14842114 | MS.gene85836:intron | 25.0% |
! | AGAAACATCAATAGATAACA+AGG | + | chr6.4:14840682-14840701 | MS.gene85836:CDS | 25.0% |
! | AGAGAAAAAAAATAACGGTT+AGG | + | chr6.4:14839878-14839897 | MS.gene85836:intron | 25.0% |
! | AGATTTACGGAATAAATACT+TGG | - | chr6.4:14842420-14842439 | None:intergenic | 25.0% |
! | AGTTACATACAATATTGTGT+CGG | + | chr6.4:14842764-14842783 | MS.gene85836:intron | 25.0% |
! | ATGAGAAAACATAATACGAA+TGG | - | chr6.4:14840609-14840628 | None:intergenic | 25.0% |
! | ATGATCGAAAACCAAAAAAA+TGG | - | chr6.4:14842038-14842057 | None:intergenic | 25.0% |
! | ATTCAACAGTTAGATTTACA+GGG | + | chr6.4:14842096-14842115 | MS.gene85836:intron | 25.0% |
! | CTACTAAAGAAAATCAACAT+CGG | + | chr6.4:14842688-14842707 | MS.gene85836:CDS | 25.0% |
! | GGTATATTATAATGTACTGT+TGG | + | chr6.4:14842785-14842804 | MS.gene85836:intron | 25.0% |
! | TACTAAAGAAAATCAACATC+GGG | + | chr6.4:14842689-14842708 | MS.gene85836:CDS | 25.0% |
! | TATGCTATCTATATATACGT+TGG | + | chr6.4:14842721-14842740 | MS.gene85836:intron | 25.0% |
! | TCTAAATACAATGGTCAAAA+TGG | + | chr6.4:14842540-14842559 | MS.gene85836:CDS | 25.0% |
! | TGAGAAAACATAATACGAAT+GGG | - | chr6.4:14840608-14840627 | None:intergenic | 25.0% |
!! | ATAGAAGTTTGTTCATATGA+TGG | + | chr6.4:14841990-14842009 | MS.gene85836:intron | 25.0% |
!! | GGATCATATATTTTTCTTGA+TGG | + | chr6.4:14839804-14839823 | MS.gene85836:intron | 25.0% |
!! | GTGATAATGAAAGATAAGAA+CGG | + | chr6.4:14841010-14841029 | MS.gene85836:CDS | 25.0% |
!! | TAAGTTGTTACTCTTGTTAT+GGG | + | chr6.4:14840130-14840149 | MS.gene85836:intron | 25.0% |
!! | TGATAATGAAAGATAAGAAC+GGG | + | chr6.4:14841011-14841030 | MS.gene85836:CDS | 25.0% |
!! | TTAAGTTGTTACTCTTGTTA+TGG | + | chr6.4:14840129-14840148 | MS.gene85836:intron | 25.0% |
!! | TTTTTCTGCAATTCAAGTAT+CGG | + | chr6.4:14842138-14842157 | MS.gene85836:CDS | 25.0% |
!!! | GCACAATTTTTTTGAAGTTA+AGG | - | chr6.4:14840533-14840552 | None:intergenic | 25.0% |
AAGTCTTTGTACACTTGAAT+GGG | - | chr6.4:14842179-14842198 | None:intergenic | 30.0% | |
ATCAAGCATCTCATAAAAAG+AGG | - | chr6.4:14841608-14841627 | None:intergenic | 30.0% | |
ATTGCCATTGAAAAATTGGA+TGG | + | chr6.4:14840824-14840843 | MS.gene85836:CDS | 30.0% | |
CTTAAACTCAACAACAATTG+TGG | - | chr6.4:14840083-14840102 | None:intergenic | 30.0% | |
GAAATGAATGGAAAGATGAT+TGG | + | chr6.4:14841655-14841674 | MS.gene85836:CDS | 30.0% | |
TCTGAATTTATGTTACTCAC+AGG | + | chr6.4:14840275-14840294 | MS.gene85836:intron | 30.0% | |
TGCCCATAATAAAATTGTTG+CGG | - | chr6.4:14842205-14842224 | None:intergenic | 30.0% | |
TTCTATTCACAAGCAAGATT+TGG | - | chr6.4:14841976-14841995 | None:intergenic | 30.0% | |
TTGAACTATGTTACTCTGAA+TGG | + | chr6.4:14840578-14840597 | MS.gene85836:CDS | 30.0% | |
! | AATTCTTTTGGCAAAGACAT+AGG | - | chr6.4:14840316-14840335 | None:intergenic | 30.0% |
! | CAACAATTTTATTATGGGCA+AGG | + | chr6.4:14842205-14842224 | MS.gene85836:CDS | 30.0% |
! | CTCCGCAACAATTTTATTAT+GGG | + | chr6.4:14842200-14842219 | MS.gene85836:CDS | 30.0% |
! | TTTTCTGCAATTCAAGTATC+GGG | + | chr6.4:14842139-14842158 | MS.gene85836:CDS | 30.0% |
!! | GGCATTACATGATACTTTTT+CGG | + | chr6.4:14840703-14840722 | MS.gene85836:CDS | 30.0% |
!!! | CATGCTTACTTCCATTTTTT+TGG | + | chr6.4:14842024-14842043 | MS.gene85836:intron | 30.0% |
AAACTCACTTGCTTCAACTT+TGG | + | chr6.4:14842659-14842678 | MS.gene85836:CDS | 35.0% | |
AACCAAGGGTCTAAATACAA+TGG | + | chr6.4:14842531-14842550 | MS.gene85836:CDS | 35.0% | |
ACATACACGTTAGTGAACTT+AGG | - | chr6.4:14840914-14840933 | None:intergenic | 35.0% | |
AGAACATTTATATCCTCTGC+TGG | + | chr6.4:14842824-14842843 | MS.gene85836:CDS | 35.0% | |
ATGGACTTACACCTATTTCA+AGG | - | chr6.4:14841835-14841854 | None:intergenic | 35.0% | |
CAAGTCTTTGTACACTTGAA+TGG | - | chr6.4:14842180-14842199 | None:intergenic | 35.0% | |
CATCAGTATATGCTTCAGAA+AGG | - | chr6.4:14840943-14840962 | None:intergenic | 35.0% | |
GAACATTTATATCCTCTGCT+GGG | + | chr6.4:14842825-14842844 | MS.gene85836:CDS | 35.0% | |
GATTTCATCACCAAAGATAG+TGG | + | chr6.4:14839468-14839487 | MS.gene85836:CDS | 35.0% | |
TATTATGGGCAAGGTACATT+TGG | + | chr6.4:14842214-14842233 | MS.gene85836:CDS | 35.0% | |
TGATATGGCTGGATGTAATT+TGG | - | chr6.4:14842316-14842335 | None:intergenic | 35.0% | |
TGGAACAATAACATCTTGCA+AGG | + | chr6.4:14841303-14841322 | MS.gene85836:CDS | 35.0% | |
TTCACAAGCAAGATTTGGAT+AGG | - | chr6.4:14841971-14841990 | None:intergenic | 35.0% | |
TTGTATCTTTGGTATGTGAG+TGG | + | chr6.4:14841354-14841373 | MS.gene85836:intron | 35.0% | |
! | AACGGGAACTCTAAATGTTT+TGG | + | chr6.4:14841028-14841047 | MS.gene85836:CDS | 35.0% |
! | AAGCAGCTTTTCAACACTTT+TGG | + | chr6.4:14840971-14840990 | MS.gene85836:CDS | 35.0% |
! | ATTTTGTTCGTCGTCAAGAA+AGG | + | chr6.4:14840882-14840901 | MS.gene85836:CDS | 35.0% |
! | CTCACAGGTCTATATCTTTT+TGG | + | chr6.4:14840290-14840309 | MS.gene85836:intron | 35.0% |
! | GCTCCGCAACAATTTTATTA+TGG | + | chr6.4:14842199-14842218 | MS.gene85836:CDS | 35.0% |
! | TAAGCCCTTATATGTTTCTG+TGG | + | chr6.4:14841681-14841700 | MS.gene85836:CDS | 35.0% |
!! | AAATTGAAGGAGCTGTTTTC+TGG | + | chr6.4:14841277-14841296 | MS.gene85836:CDS | 35.0% |
!! | AAGTGTTGAAAAGCTGCTTA+AGG | - | chr6.4:14840970-14840989 | None:intergenic | 35.0% |
!! | CATGCCATCCAATTTTTCAA+TGG | - | chr6.4:14840831-14840850 | None:intergenic | 35.0% |
!! | GCAAGTGAGTTTTTAGACAA+CGG | - | chr6.4:14842651-14842670 | None:intergenic | 35.0% |
!! | TTCTGAAGCATATACTGATG+AGG | + | chr6.4:14840943-14840962 | MS.gene85836:CDS | 35.0% |
!!! | ATGGGAAGGTTTTATTTGTC+CGG | + | chr6.4:14841122-14841141 | MS.gene85836:CDS | 35.0% |
!!! | CATGATACTTTTTCGGCTTT+TGG | + | chr6.4:14840710-14840729 | MS.gene85836:CDS | 35.0% |
AACAACAATTGTGGCCACTT+TGG | - | chr6.4:14840074-14840093 | None:intergenic | 40.0% | |
AACCTTCCCATCATTAGTTG+TGG | - | chr6.4:14841113-14841132 | None:intergenic | 40.0% | |
AAGGTTGCTATGGATAGCAA+TGG | + | chr6.4:14840749-14840768 | MS.gene85836:CDS | 40.0% | |
AATGGGACCACAACTAATGA+TGG | + | chr6.4:14841103-14841122 | MS.gene85836:CDS | 40.0% | |
AATGGTCAATCTAGGGGATT+TGG | + | chr6.4:14840767-14840786 | MS.gene85836:CDS | 40.0% | |
ACCAAGCAATCAGACATCAA+AGG | + | chr6.4:14842857-14842876 | MS.gene85836:CDS | 40.0% | |
ACCTTTGATGTCTGATTGCT+TGG | - | chr6.4:14842861-14842880 | None:intergenic | 40.0% | |
ACTGCTGTTGAGAAGTTGAA+TGG | + | chr6.4:14841085-14841104 | MS.gene85836:CDS | 40.0% | |
ATACAAACCATCACGAGCAT+TGG | - | chr6.4:14839680-14839699 | None:intergenic | 40.0% | |
ATACAATGGTCAAAATGGCG+TGG | + | chr6.4:14842545-14842564 | MS.gene85836:CDS | 40.0% | |
ATACAGTCATCTCTTGGCTA+TGG | + | chr6.4:14839640-14839659 | MS.gene85836:CDS | 40.0% | |
ATGGGACCACAACTAATGAT+GGG | + | chr6.4:14841104-14841123 | MS.gene85836:CDS | 40.0% | |
ATTCTCAAATCTTCCAGCAC+CGG | - | chr6.4:14839509-14839528 | None:intergenic | 40.0% | |
CAAATGACATACCGCTTTAC+TGG | - | chr6.4:14841547-14841566 | None:intergenic | 40.0% | |
CAGATGATACAGTCATCTCT+TGG | + | chr6.4:14839634-14839653 | MS.gene85836:CDS | 40.0% | |
CTGCTGTTGAGAAGTTGAAT+GGG | + | chr6.4:14841086-14841105 | MS.gene85836:CDS | 40.0% | |
GACCATTGTATTTAGACCCT+TGG | - | chr6.4:14842536-14842555 | None:intergenic | 40.0% | |
GAGAATGCTTCATTGTACGT+TGG | + | chr6.4:14839523-14839542 | MS.gene85836:CDS | 40.0% | |
GATAGCAATGGTCAATCTAG+GGG | + | chr6.4:14840761-14840780 | MS.gene85836:CDS | 40.0% | |
GCTTTCTTGTAAGGTTGCTA+TGG | + | chr6.4:14840739-14840758 | MS.gene85836:CDS | 40.0% | |
GGATAGCAATGGTCAATCTA+GGG | + | chr6.4:14840760-14840779 | MS.gene85836:CDS | 40.0% | |
GGCTCAGAAAAAATCGGAAA+GGG | + | chr6.4:14841147-14841166 | MS.gene85836:CDS | 40.0% | |
GTATGTGAGTGGATACTCAA+TGG | + | chr6.4:14841365-14841384 | MS.gene85836:intron | 40.0% | |
TCAGAAAAAATCGGAAAGGG+AGG | + | chr6.4:14841150-14841169 | MS.gene85836:CDS | 40.0% | |
TCAGACATCAAAGGTGATTG+AGG | + | chr6.4:14842866-14842885 | MS.gene85836:CDS | 40.0% | |
TGGACATGTGCTTTCTTGTA+AGG | + | chr6.4:14840730-14840749 | MS.gene85836:CDS | 40.0% | |
TGGATAGCAATGGTCAATCT+AGG | + | chr6.4:14840759-14840778 | MS.gene85836:CDS | 40.0% | |
TGGGCCACAGAAACATATAA+GGG | - | chr6.4:14841688-14841707 | None:intergenic | 40.0% | |
TGTATTTAGACCCTTGGTTC+AGG | - | chr6.4:14842530-14842549 | None:intergenic | 40.0% | |
TTACAGGGTTGTGTAATTGC+AGG | + | chr6.4:14842111-14842130 | MS.gene85836:intron | 40.0% | |
TTGGGCCACAGAAACATATA+AGG | - | chr6.4:14841689-14841708 | None:intergenic | 40.0% | |
! | AATCCAGTTTTCCGAATGAG+AGG | - | chr6.4:14840638-14840657 | None:intergenic | 40.0% |
! | ACCAAAGATAGTGGTTCCAA+CGG | + | chr6.4:14839477-14839496 | MS.gene85836:CDS | 40.0% |
! | ACTGTTGGTTAAACAGATGC+TGG | + | chr6.4:14842800-14842819 | MS.gene85836:intron | 40.0% |
! | TGTTGCCTTTTCTACTTCTG+AGG | + | chr6.4:14841518-14841537 | MS.gene85836:CDS | 40.0% |
! | TTTTAGACAACGGACCATGA+CGG | - | chr6.4:14842641-14842660 | None:intergenic | 40.0% |
!! | AAGGAGCTGTTTTCTGGATT+TGG | + | chr6.4:14841283-14841302 | MS.gene85836:CDS | 40.0% |
!! | GTACGATTTGGCCTTGAAAT+AGG | + | chr6.4:14841821-14841840 | MS.gene85836:intron | 40.0% |
!! | TGTACGTTGGTGATCTTGAA+GGG | + | chr6.4:14839536-14839555 | MS.gene85836:CDS | 40.0% |
!! | TTCATGTTAGGTGTTGGAAC+TGG | + | chr6.4:14842280-14842299 | MS.gene85836:CDS | 40.0% |
!! | TTGTACGTTGGTGATCTTGA+AGG | + | chr6.4:14839535-14839554 | MS.gene85836:CDS | 40.0% |
!!! | GAAGGTTTTATTTGTCCGGA+GGG | + | chr6.4:14841126-14841145 | MS.gene85836:CDS | 40.0% |
AACTTCTCCAATGCTCGTGA+TGG | + | chr6.4:14839670-14839689 | MS.gene85836:CDS | 45.0% | |
ACCATGACGGTGATTGTCAA+TGG | - | chr6.4:14842628-14842647 | None:intergenic | 45.0% | |
ATGACGGTGATTGTCAATGG+AGG | - | chr6.4:14842625-14842644 | None:intergenic | 45.0% | |
ATTGAGGCGATTCGATTCCT+TGG | + | chr6.4:14842882-14842901 | MS.gene85836:CDS | 45.0% | |
CAAACCCTAACAGAAACCAC+TGG | - | chr6.4:14839607-14839626 | None:intergenic | 45.0% | |
CACTACCAAATACGCCAAAG+TGG | + | chr6.4:14840057-14840076 | MS.gene85836:intron | 45.0% | |
CCAACACCTAACATGAACTG+TGG | - | chr6.4:14842277-14842296 | None:intergenic | 45.0% | |
CCAATGTGATTACGAACTGC+AGG | - | chr6.4:14842924-14842943 | None:intergenic | 45.0% | |
CCACAGTTCATGTTAGGTGT+TGG | + | chr6.4:14842274-14842293 | MS.gene85836:CDS | 45.0% | |
CCTGCAGTTCGTAATCACAT+TGG | + | chr6.4:14842921-14842940 | MS.gene85836:CDS | 45.0% | |
CTCATCGAGATCCTCTCATT+CGG | + | chr6.4:14840624-14840643 | MS.gene85836:CDS | 45.0% | |
GACCTCATAACCTGAACCAA+GGG | + | chr6.4:14842517-14842536 | MS.gene85836:CDS | 45.0% | |
GATCCTCTCATTCGGAAAAC+TGG | + | chr6.4:14840632-14840651 | MS.gene85836:CDS | 45.0% | |
GGCTTCCTCAGAAGTAGAAA+AGG | - | chr6.4:14841526-14841545 | None:intergenic | 45.0% | |
GGGCTCAGAAAAAATCGGAA+AGG | + | chr6.4:14841146-14841165 | MS.gene85836:CDS | 45.0% | |
TAGCTGCTGAATCTGAGCTT+TGG | - | chr6.4:14841066-14841085 | None:intergenic | 45.0% | |
TCCATTGACAATCACCGTCA+TGG | + | chr6.4:14842624-14842643 | MS.gene85836:CDS | 45.0% | |
TCTTGAAGGGAACGTGAATG+AGG | + | chr6.4:14839549-14839568 | MS.gene85836:CDS | 45.0% | |
TGCTCCAGTGGTTTCTGTTA+GGG | + | chr6.4:14839600-14839619 | MS.gene85836:CDS | 45.0% | |
TGGATTCATCGTTTGACTGC+CGG | - | chr6.4:14842586-14842605 | None:intergenic | 45.0% | |
TTCCAGCCACAGTTCATGTT+AGG | + | chr6.4:14842268-14842287 | MS.gene85836:CDS | 45.0% | |
TTCCTTGGTGAAGCTTCAAG+AGG | + | chr6.4:14842897-14842916 | MS.gene85836:CDS | 45.0% | |
TTGCTCCAGTGGTTTCTGTT+AGG | + | chr6.4:14839599-14839618 | MS.gene85836:CDS | 45.0% | |
TTTCCTGTCCTCTTTGCGTT+GGG | - | chr6.4:14841707-14841726 | None:intergenic | 45.0% | |
! | ACTTGCTGGAATTTACCTGC+TGG | - | chr6.4:14842382-14842401 | None:intergenic | 45.0% |
! | GACCACAACTAATGATGGGA+AGG | + | chr6.4:14841108-14841127 | MS.gene85836:CDS | 45.0% |
! | TTCTGAGGAAGCCAGTAAAG+CGG | + | chr6.4:14841533-14841552 | MS.gene85836:CDS | 45.0% |
!! | TCTGCAATTCAAGTATCGGG+TGG | + | chr6.4:14842142-14842161 | MS.gene85836:CDS | 45.0% |
!!! | GGAAGGTTTTATTTGTCCGG+AGG | + | chr6.4:14841125-14841144 | MS.gene85836:CDS | 45.0% |
!!! | ATTTTTTTAATTAAATAAGT+GGG | + | chr6.4:14840238-14840257 | MS.gene85836:intron | 5.0% |
!!! | TATTTTTTTAATTAAATAAG+TGG | + | chr6.4:14840237-14840256 | MS.gene85836:intron | 5.0% |
AAACCGTATCCGTTTGGCTG+AGG | - | chr6.4:14842250-14842269 | None:intergenic | 50.0% | |
ATCGAGGGAATAGGATGGGT+GGG | + | chr6.4:14842353-14842372 | MS.gene85836:CDS | 50.0% | |
CAAAACCGAAGCCCTTGCTA+CGG | - | chr6.4:14841500-14841519 | None:intergenic | 50.0% | |
CACCTAACATGAACTGTGGC+TGG | - | chr6.4:14842273-14842292 | None:intergenic | 50.0% | |
CAGAAACCACTGGAGCAATC+TGG | - | chr6.4:14839597-14839616 | None:intergenic | 50.0% | |
CAGGTAATGTCTGATGCTCG+TGG | + | chr6.4:14841474-14841493 | MS.gene85836:intron | 50.0% | |
CCATATCACCTTCAGAGGCA+GGG | + | chr6.4:14842328-14842347 | MS.gene85836:CDS | 50.0% | |
CCGGAGGGCTCAGAAAAAAT+CGG | + | chr6.4:14841141-14841160 | MS.gene85836:CDS | 50.0% | |
CGACCTCATAACCTGAACCA+AGG | + | chr6.4:14842516-14842535 | MS.gene85836:CDS | 50.0% | |
CTCATTTCGCCTCAGCCAAA+CGG | + | chr6.4:14842238-14842257 | MS.gene85836:CDS | 50.0% | |
CTTTCCTGTCCTCTTTGCGT+TGG | - | chr6.4:14841708-14841727 | None:intergenic | 50.0% | |
GACCTCTTGAAGCTTCACCA+AGG | - | chr6.4:14842902-14842921 | None:intergenic | 50.0% | |
GCCGTTGGAACCACTATCTT+TGG | - | chr6.4:14839481-14839500 | None:intergenic | 50.0% | |
GGACAGGAAAGCTCAATTGC+AGG | + | chr6.4:14841717-14841736 | MS.gene85836:CDS | 50.0% | |
GGACATCGAGGGAATAGGAT+GGG | + | chr6.4:14842349-14842368 | MS.gene85836:CDS | 50.0% | |
GGATTCATCGTTTGACTGCC+GGG | - | chr6.4:14842585-14842604 | None:intergenic | 50.0% | |
GTGGATACGTCTGTAGATCC+CGG | + | chr6.4:14842564-14842583 | MS.gene85836:CDS | 50.0% | |
TCCAGCCATATCACCTTCAG+AGG | + | chr6.4:14842323-14842342 | MS.gene85836:CDS | 50.0% | |
TTTGCTGCTGTCGTACTTGC+TGG | - | chr6.4:14842396-14842415 | None:intergenic | 50.0% | |
! | GACCCTTGGTTCAGGTTATG+AGG | - | chr6.4:14842522-14842541 | None:intergenic | 50.0% |
! | TGTGGCCACTTTGGCGTATT+TGG | - | chr6.4:14840065-14840084 | None:intergenic | 50.0% |
!!! | CCGATTTTTTCTGAGCCCTC+CGG | - | chr6.4:14841144-14841163 | None:intergenic | 50.0% |
CATCGAGGGAATAGGATGGG+TGG | + | chr6.4:14842352-14842371 | MS.gene85836:CDS | 55.0% | |
GAGGTTGCAGCACTTGCAGA+TGG | - | chr6.4:14842606-14842625 | None:intergenic | 55.0% | |
GCCATATCACCTTCAGAGGC+AGG | + | chr6.4:14842327-14842346 | MS.gene85836:CDS | 55.0% | |
GGCTGGAAACCGTATCCGTT+TGG | - | chr6.4:14842256-14842275 | None:intergenic | 55.0% | |
GGGACATCGAGGGAATAGGA+TGG | + | chr6.4:14842348-14842367 | MS.gene85836:CDS | 55.0% | |
GTTCAGCCAGATTGCTCCAG+TGG | + | chr6.4:14839588-14839607 | MS.gene85836:CDS | 55.0% | |
TCGCCTCAGCCAAACGGATA+CGG | + | chr6.4:14842244-14842263 | MS.gene85836:CDS | 55.0% | |
TTCAGAGGCAGGGACATCGA+GGG | + | chr6.4:14842338-14842357 | MS.gene85836:CDS | 55.0% | |
TTCTGTGGCCCAACGCAAAG+AGG | + | chr6.4:14841696-14841715 | MS.gene85836:CDS | 55.0% | |
! | CCCTGCCTCTGAAGGTGATA+TGG | - | chr6.4:14842331-14842350 | None:intergenic | 55.0% |
! | GCCTCTGAAGGTGATATGGC+TGG | - | chr6.4:14842327-14842346 | None:intergenic | 55.0% |
! | GTGGTTCCAACGGCTTTGAC+CGG | + | chr6.4:14839487-14839506 | MS.gene85836:CDS | 55.0% |
CTCGATGTCCCTGCCTCTGA+AGG | - | chr6.4:14842339-14842358 | None:intergenic | 60.0% | |
CTTCAGAGGCAGGGACATCG+AGG | + | chr6.4:14842337-14842356 | MS.gene85836:CDS | 60.0% | |
GATGCTCGTGGCCGTAGCAA+GGG | + | chr6.4:14841486-14841505 | MS.gene85836:CDS | 60.0% | |
GGCAGGGACATCGAGGGAAT+AGG | + | chr6.4:14842344-14842363 | MS.gene85836:CDS | 60.0% | |
GGTGTAAGACGACCCAGCAG+AGG | - | chr6.4:14842840-14842859 | None:intergenic | 60.0% | |
TGATGCTCGTGGCCGTAGCA+AGG | + | chr6.4:14841485-14841504 | MS.gene85836:CDS | 60.0% | |
TGCGGCAGCTGCTAATGCGA+TGG | + | chr6.4:14840550-14840569 | MS.gene85836:intron | 60.0% | |
TGGCCCAACGCAAAGAGGAC+AGG | + | chr6.4:14841701-14841720 | MS.gene85836:CDS | 60.0% | |
CGTGGCCGTAGCAAGGGCTT+CGG | + | chr6.4:14841492-14841511 | MS.gene85836:CDS | 65.0% | |
! | CCAACGGCTTTGACCGGTGC+TGG | + | chr6.4:14839493-14839512 | MS.gene85836:CDS | 65.0% |
!! | CCAGCACCGGTCAAAGCCGT+TGG | - | chr6.4:14839496-14839515 | None:intergenic | 65.0% |
AGGATGGGTGGGCGTCCAGC+AGG | + | chr6.4:14842364-14842383 | MS.gene85836:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 14839457 | 14842950 | 14839457 | ID=MS.gene85836 |
chr6.4 | mRNA | 14839457 | 14842950 | 14839457 | ID=MS.gene85836.t1;Parent=MS.gene85836 |
chr6.4 | exon | 14839457 | 14839691 | 14839457 | ID=MS.gene85836.t1.exon1;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14839457 | 14839691 | 14839457 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14840558 | 14841324 | 14840558 | ID=MS.gene85836.t1.exon2;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14840558 | 14841324 | 14840558 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14841477 | 14841554 | 14841477 | ID=MS.gene85836.t1.exon3;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14841477 | 14841554 | 14841477 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14841649 | 14841738 | 14841649 | ID=MS.gene85836.t1.exon4;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14841649 | 14841738 | 14841649 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14842133 | 14842420 | 14842133 | ID=MS.gene85836.t1.exon5;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14842133 | 14842420 | 14842133 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14842513 | 14842710 | 14842513 | ID=MS.gene85836.t1.exon6;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14842513 | 14842710 | 14842513 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
chr6.4 | exon | 14842816 | 14842950 | 14842816 | ID=MS.gene85836.t1.exon7;Parent=MS.gene85836.t1 |
chr6.4 | CDS | 14842816 | 14842950 | 14842816 | ID=cds.MS.gene85836.t1;Parent=MS.gene85836.t1 |
Gene Sequence |
Protein sequence |