AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88866

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88866.t1 MTR_1g097440 96.285 646 17 1 1 639 1 646 0.0 1272
MS.gene88866.t1 MTR_6g040190 64.263 638 204 9 1 632 1 620 0.0 783
MS.gene88866.t1 MTR_4g085540 58.824 612 227 13 27 623 31 632 0.0 684
MS.gene88866.t1 MTR_1g019150 56.160 625 255 11 27 639 29 646 0.0 655
MS.gene88866.t1 MTR_3g102040 56.604 636 243 12 13 639 7 618 0.0 635
MS.gene88866.t1 MTR_6g040070 66.231 459 145 4 104 562 1 449 0.0 609
MS.gene88866.t1 MTR_7g102730 43.021 609 314 10 30 619 10 604 2.77e-147 441
MS.gene88866.t1 MTR_1g061870 41.649 473 249 8 8 474 1 452 1.08e-113 350
MS.gene88866.t1 MTR_3g065190 35.556 180 113 3 29 206 24 202 1.96e-30 123
MS.gene88866.t1 MTR_3g065190 29.570 186 110 5 212 394 28 195 2.04e-16 82.0
MS.gene88866.t1 MTR_3g065190 28.342 187 124 5 111 292 18 199 1.16e-15 79.7
MS.gene88866.t1 MTR_1723s0010 66.265 83 23 1 1 83 1 78 4.72e-29 110
MS.gene88866.t1 MTR_1g020080 31.655 278 161 11 29 284 96 366 1.04e-26 113
MS.gene88866.t1 MTR_1g020080 23.944 284 206 6 119 398 98 375 6.55e-23 102
MS.gene88866.t1 MTR_3g101370 29.242 277 170 10 29 284 92 363 8.77e-25 107
MS.gene88866.t1 MTR_3g101370 25.000 308 212 11 120 421 95 389 5.16e-20 93.6
MS.gene88866.t1 MTR_4g131970 28.239 301 187 10 9 285 51 346 4.32e-24 105
MS.gene88866.t1 MTR_4g131970 23.509 285 204 9 120 397 76 353 2.89e-17 84.7
MS.gene88866.t1 MTR_2g022950 28.223 287 178 11 31 294 61 342 1.88e-23 103
MS.gene88866.t1 MTR_2g022950 23.077 286 205 9 120 397 62 340 2.24e-16 82.0
MS.gene88866.t1 MTR_0913s0010 65.714 70 24 0 565 634 1 70 7.34e-23 92.8
MS.gene88866.t1 MTR_0989s0020 72.581 62 17 0 562 623 12 73 1.15e-22 92.8
MS.gene88866.t1 MTR_1889s0010 63.492 63 22 1 23 85 14 75 2.04e-20 86.7
MS.gene88866.t1 MTR_2g097960 26.599 297 172 10 31 286 16 307 5.37e-20 93.6
MS.gene88866.t1 MTR_4g086600 28.620 297 163 12 31 285 117 406 6.04e-19 90.5
MS.gene88866.t1 MTR_4g086600 28.495 186 121 6 211 392 118 295 2.32e-12 70.1
MS.gene88866.t1 MTR_3g109090 25.632 277 165 9 31 274 45 313 2.03e-18 88.6
MS.gene88866.t1 MTR_3g109090 25.342 292 191 6 110 383 36 318 2.14e-17 85.5
MS.gene88866.t1 MTR_3g109090 25.632 277 165 9 31 274 61 329 2.54e-18 88.6
MS.gene88866.t1 MTR_3g109090 25.342 292 191 6 110 383 52 334 2.69e-17 85.1
MS.gene88866.t1 MTR_8g022050 25.874 286 164 9 31 280 63 336 2.70e-18 88.2
MS.gene88866.t1 MTR_8g022050 26.733 303 178 10 109 382 57 344 6.36e-17 84.0
MS.gene88866.t1 MTR_4g124940 25.083 303 178 9 8 270 17 310 3.91e-18 87.4
MS.gene88866.t1 MTR_4g124940 25.418 299 181 9 110 383 38 319 4.71e-16 81.3
MS.gene88866.t1 MTR_1g020080 29.070 172 111 5 29 191 96 265 6.28e-16 79.7
MS.gene88866.t1 MTR_6g040200 51.899 79 36 1 460 538 1 77 6.81e-16 73.6
MS.gene88866.t1 MTR_3g075500 31.771 192 119 5 206 394 106 288 2.87e-15 77.4
MS.gene88866.t1 MTR_3g075500 26.404 178 109 4 29 190 108 279 3.97e-11 64.7
MS.gene88866.t1 MTR_2g022950 28.235 170 113 5 31 191 61 230 3.45e-15 76.6
MS.gene88866.t1 MTR_4g052940 25.410 244 166 6 30 267 110 343 3.95e-15 79.0
MS.gene88866.t1 MTR_1g056520 29.012 162 103 2 32 181 110 271 6.43e-15 76.6
MS.gene88866.t1 MTR_1g056520 28.649 185 114 5 211 388 110 283 1.53e-11 66.2
MS.gene88866.t1 MTR_1g056520 28.824 170 106 6 117 274 107 273 4.91e-11 64.7
MS.gene88866.t1 MTR_4g052940 25.410 244 166 6 30 267 110 343 1.23e-14 76.3
MS.gene88866.t1 MTR_2g022950 28.235 170 113 5 31 191 61 230 1.82e-14 74.7
MS.gene88866.t1 MTR_3g101370 26.178 191 128 5 29 206 92 282 2.03e-14 74.7
MS.gene88866.t1 MTR_3g075500 32.571 175 106 5 206 377 106 271 7.09e-14 72.8
MS.gene88866.t1 MTR_7g118120 23.221 267 191 5 30 291 104 361 1.31e-13 73.9
MS.gene88866.t1 MTR_7g106440 25.366 205 132 4 32 220 111 310 2.32e-13 72.0
MS.gene88866.t1 MTR_3g055990 25.490 255 132 11 211 423 8 246 2.42e-13 73.2
MS.gene88866.t1 MTR_3g055990 25.490 255 132 11 211 423 8 246 3.01e-13 72.8
MS.gene88866.t1 MTR_1g064230 29.412 187 107 4 29 190 83 269 4.79e-13 70.5
MS.gene88866.t1 MTR_1g064230 29.208 202 114 5 120 299 86 280 1.32e-12 68.9
MS.gene88866.t1 MTR_5g030020 34.595 185 108 7 210 391 97 271 8.35e-13 70.5
MS.gene88866.t1 MTR_7g094660 31.304 230 136 12 102 318 627 847 9.93e-13 72.0
MS.gene88866.t1 MTR_7g094660 29.362 235 143 10 181 402 609 833 2.60e-12 70.5
MS.gene88866.t1 MTR_4g104470 30.645 186 116 5 211 394 124 298 1.79e-12 68.9
MS.gene88866.t1 MTR_7g010360 23.396 265 190 5 30 290 350 605 1.88e-12 70.9
MS.gene88866.t1 MTR_7g107580 27.168 346 201 15 211 549 18 319 2.61e-12 69.3
MS.gene88866.t1 MTR_4g063560 37.805 82 50 1 112 192 27 108 4.74e-12 63.5
MS.gene88866.t1 MTR_8g007390 22.711 273 186 8 32 291 216 476 4.94e-12 69.7
MS.gene88866.t1 MTR_8g007390 22.711 273 186 8 32 291 217 477 5.93e-12 69.3
MS.gene88866.t1 MTR_7g107580 27.011 348 203 15 209 549 16 319 5.94e-12 68.6
MS.gene88866.t1 MTR_2g026180 27.717 184 104 8 211 378 6 176 2.46e-11 67.0
MS.gene88866.t1 MTR_8g463890 28.216 241 150 7 148 381 10 234 2.49e-11 66.6
MS.gene88866.t1 MTR_3g027140 30.688 189 120 6 193 378 45 225 4.28e-11 63.9
MS.gene88866.t1 MTR_4g122650 25.128 195 124 6 208 396 87 265 5.76e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88866.t1 AT1G71770 57.532 624 242 13 29 633 58 677 0.0 692
MS.gene88866.t1 AT1G71770 57.532 624 242 13 29 633 58 677 0.0 692
MS.gene88866.t1 AT1G22760 57.528 631 234 14 9 619 27 643 0.0 681
MS.gene88866.t1 AT4G34110 54.844 640 259 14 10 638 9 629 0.0 646
MS.gene88866.t1 AT1G49760 54.976 633 254 15 29 639 44 667 0.0 627
MS.gene88866.t1 AT1G49760 54.976 633 254 15 29 639 44 667 0.0 627
MS.gene88866.t1 AT2G23350 53.555 633 257 15 28 639 44 660 0.0 617
MS.gene88866.t1 AT2G36660 38.926 596 330 9 30 624 24 586 3.34e-124 381
MS.gene88866.t1 AT2G36660 28.421 190 118 2 206 394 21 193 1.96e-18 89.7
MS.gene88866.t1 AT1G34140 49.515 412 173 8 89 473 2 405 4.06e-119 360
MS.gene88866.t1 AT1G34140 31.802 283 177 4 31 299 32 312 8.58e-37 142
MS.gene88866.t1 AT3G16380 45.600 375 198 4 31 402 22 393 1.70e-101 320
MS.gene88866.t1 AT3G16380 33.793 290 170 6 118 403 21 292 3.61e-39 152
MS.gene88866.t1 AT3G16380 34.197 193 111 4 205 396 17 194 1.90e-22 102
MS.gene88866.t1 AT3G16380 33.508 191 105 4 29 201 201 387 1.46e-21 99.4
MS.gene88866.t1 AT2G18510 33.889 180 116 3 29 206 24 202 5.53e-29 119
MS.gene88866.t1 AT2G18510 27.273 187 115 5 211 394 27 195 9.93e-15 76.6
MS.gene88866.t1 AT1G47500 31.673 281 162 11 29 284 102 377 6.59e-27 114
MS.gene88866.t1 AT1G47500 26.071 280 174 12 120 381 105 369 1.97e-19 92.0
MS.gene88866.t1 AT3G19130 31.544 298 160 12 31 291 109 399 2.86e-26 112
MS.gene88866.t1 AT3G19130 27.667 300 170 13 116 383 102 386 1.50e-19 92.0
MS.gene88866.t1 AT1G47490 31.673 281 162 11 29 284 100 375 6.71e-26 111
MS.gene88866.t1 AT1G47490 26.740 273 181 12 120 381 103 367 2.68e-21 97.4
MS.gene88866.t1 AT5G54900 27.500 280 176 9 31 288 61 335 6.44e-24 104
MS.gene88866.t1 AT5G54900 23.490 298 194 11 119 399 61 341 5.30e-15 77.8
MS.gene88866.t1 AT1G49600 31.058 293 163 11 31 291 120 405 1.10e-23 105
MS.gene88866.t1 AT1G49600 27.622 286 171 11 120 383 121 392 1.30e-19 92.4
MS.gene88866.t1 AT1G49600 30.847 295 165 11 31 293 120 407 1.37e-23 104
MS.gene88866.t1 AT1G49600 26.959 319 189 13 114 405 110 411 2.71e-20 94.7
MS.gene88866.t1 AT1G49600 30.847 295 165 11 31 293 120 407 1.37e-23 104
MS.gene88866.t1 AT1G49600 26.959 319 189 13 114 405 110 411 2.71e-20 94.7
MS.gene88866.t1 AT1G54080 27.174 276 153 9 31 270 64 327 2.76e-22 100
MS.gene88866.t1 AT1G54080 27.526 287 174 9 109 376 58 329 1.14e-18 89.4
MS.gene88866.t1 AT1G54080 28.571 175 105 5 210 383 64 219 1.97e-12 70.1
MS.gene88866.t1 AT4G27000 27.273 275 175 10 31 285 81 350 7.09e-22 99.0
MS.gene88866.t1 AT4G27000 24.315 292 193 11 119 397 81 357 1.80e-14 76.3
MS.gene88866.t1 AT1G11650 26.230 305 198 10 2 285 35 333 3.06e-21 97.1
MS.gene88866.t1 AT1G11650 23.381 278 199 7 110 379 51 322 3.34e-15 78.6
MS.gene88866.t1 AT1G54080 27.143 280 152 10 31 270 64 331 6.71e-21 96.3
MS.gene88866.t1 AT1G54080 27.491 291 173 10 109 376 58 333 2.87e-17 85.1
MS.gene88866.t1 AT5G19350 25.448 279 173 8 31 279 25 298 4.16e-19 90.9
MS.gene88866.t1 AT3G14100 25.362 276 158 8 31 270 60 323 4.17e-19 90.9
MS.gene88866.t1 AT3G14100 27.402 281 170 8 109 370 54 319 1.29e-16 83.2
MS.gene88866.t1 AT3G14100 28.000 175 106 5 210 383 60 215 3.22e-12 69.3
MS.gene88866.t1 AT5G19350 25.442 283 172 7 31 279 25 302 4.78e-19 90.5
MS.gene88866.t1 AT1G11650 25.818 275 178 9 2 256 35 303 5.53e-19 88.6
MS.gene88866.t1 AT1G17370 27.148 291 179 10 109 381 49 324 2.38e-16 82.0
MS.gene88866.t1 AT1G17370 25.275 273 159 9 31 270 55 315 2.41e-15 79.0
MS.gene88866.t1 AT1G17370 26.531 294 180 10 109 381 49 327 5.08e-16 81.3
MS.gene88866.t1 AT1G17370 25.362 276 158 9 31 270 55 318 3.39e-15 78.6
MS.gene88866.t1 AT1G47500 30.058 173 111 6 29 191 102 274 5.21e-16 80.1
MS.gene88866.t1 AT2G37220 27.368 190 110 3 28 190 89 277 8.33e-16 79.0
MS.gene88866.t1 AT4G00830 25.926 270 185 6 30 294 116 375 1.31e-15 80.5
MS.gene88866.t1 AT4G00830 24.372 398 246 13 120 494 118 483 9.61e-15 77.8
MS.gene88866.t1 AT4G00830 25.926 270 185 6 30 294 116 375 1.31e-15 80.5
MS.gene88866.t1 AT4G00830 24.372 398 246 13 120 494 118 483 9.61e-15 77.8
MS.gene88866.t1 AT4G00830 25.926 270 185 6 30 294 116 375 1.31e-15 80.5
MS.gene88866.t1 AT4G00830 24.372 398 246 13 120 494 118 483 9.61e-15 77.8
MS.gene88866.t1 AT4G00830 25.843 267 181 6 30 294 116 367 3.24e-15 79.3
MS.gene88866.t1 AT4G00830 24.874 398 236 14 120 494 118 475 3.54e-14 75.9
MS.gene88866.t1 AT4G00830 25.843 267 181 6 30 294 116 367 3.24e-15 79.3
MS.gene88866.t1 AT4G00830 24.874 398 236 14 120 494 118 475 3.54e-14 75.9
MS.gene88866.t1 AT1G47490 30.058 173 111 6 29 191 100 272 3.27e-15 77.4
MS.gene88866.t1 AT4G24770 32.979 188 111 6 211 395 152 327 1.56e-14 75.9
MS.gene88866.t1 AT4G24770 28.402 169 112 3 30 190 150 317 8.48e-12 67.4
MS.gene88866.t1 AT4G24770 32.979 188 111 6 211 395 152 327 1.56e-14 75.9
MS.gene88866.t1 AT4G24770 28.402 169 112 3 30 190 150 317 8.48e-12 67.4
MS.gene88866.t1 AT1G01080 29.843 191 118 6 104 280 95 283 2.80e-14 74.3
MS.gene88866.t1 AT4G00830 24.561 399 244 14 120 494 118 483 3.93e-14 75.9
MS.gene88866.t1 AT4G00830 24.815 270 188 6 30 294 116 375 3.13e-12 69.7
MS.gene88866.t1 AT1G01080 30.978 184 111 6 104 273 95 276 5.97e-14 73.2
MS.gene88866.t1 AT1G01080 29.688 192 118 6 104 280 95 284 1.01e-13 72.8
MS.gene88866.t1 AT2G44710 23.048 269 182 8 32 287 216 472 1.19e-13 74.7
MS.gene88866.t1 AT2G44710 23.048 269 182 8 32 287 216 472 1.19e-13 74.7
MS.gene88866.t1 AT2G44710 23.048 269 182 8 32 287 131 387 1.20e-13 74.7
MS.gene88866.t1 AT2G35410 27.419 186 120 4 211 390 97 273 2.42e-13 71.6
MS.gene88866.t1 AT3G52380 24.000 175 109 3 32 186 118 288 4.62e-13 71.2
MS.gene88866.t1 AT3G52380 28.351 194 110 6 118 292 116 299 1.51e-11 66.6
MS.gene88866.t1 AT3G52380 29.032 186 126 5 211 393 118 300 5.94e-11 64.7
MS.gene88866.t1 AT5G50250 30.890 191 119 6 206 394 110 289 5.76e-13 70.5
MS.gene88866.t1 AT5G50250 28.333 180 117 4 30 201 113 288 1.22e-12 69.3
MS.gene88866.t1 AT3G52150 31.319 182 95 6 211 378 78 243 6.40e-13 69.7
MS.gene88866.t1 AT3G52150 25.946 185 123 3 20 190 66 250 6.63e-11 63.5
MS.gene88866.t1 AT3G52150 31.319 182 95 6 211 378 78 243 6.40e-13 69.7
MS.gene88866.t1 AT3G52150 25.946 185 123 3 20 190 66 250 6.63e-11 63.5
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.91e-13 71.6
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.91e-13 71.6
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.91e-13 71.6
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.91e-13 71.6
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 7.91e-13 71.6
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.05e-12 71.2
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.05e-12 71.2
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.05e-12 71.2
MS.gene88866.t1 AT5G55550 26.531 245 139 11 211 441 8 225 1.05e-12 71.2
MS.gene88866.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.80e-12 69.3
MS.gene88866.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.80e-12 69.3
MS.gene88866.t1 AT5G47620 27.624 181 106 8 211 378 8 176 3.80e-12 69.3
MS.gene88866.t1 AT3G52660 22.131 244 176 4 30 267 92 327 4.16e-12 69.3
MS.gene88866.t1 AT3G52660 22.131 244 176 4 30 267 92 327 4.16e-12 69.3
MS.gene88866.t1 AT3G52660 22.131 244 176 4 30 267 92 327 4.16e-12 69.3
MS.gene88866.t1 AT4G26650 25.405 185 112 6 211 378 17 192 5.48e-12 68.9
MS.gene88866.t1 AT4G26650 25.405 185 112 6 211 378 14 189 5.53e-12 68.9
MS.gene88866.t1 AT3G19350 48.485 66 33 1 554 619 23 87 6.03e-12 62.8
MS.gene88866.t1 AT1G45100 28.743 167 102 3 206 370 153 304 1.17e-11 68.2
MS.gene88866.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene88866.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene88866.t1 AT1G17640 25.683 183 120 4 211 391 68 236 1.54e-11 67.0
MS.gene88866.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene88866.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene88866.t1 AT5G41690 26.943 193 126 4 211 389 70 261 1.66e-11 67.8
MS.gene88866.t1 AT3G46020 34.737 95 61 1 313 406 7 101 1.75e-11 61.6
MS.gene88866.t1 AT4G13850 41.333 75 43 1 117 190 34 108 1.90e-11 62.8
MS.gene88866.t1 AT4G19610 30.636 173 109 5 109 272 595 765 1.94e-11 67.8
MS.gene88866.t1 AT4G13850 41.333 75 43 1 117 190 34 108 2.33e-11 62.8
MS.gene88866.t1 AT1G60000 25.140 179 127 3 18 190 73 250 2.47e-11 65.1
MS.gene88866.t1 AT4G13850 41.333 75 43 1 117 190 34 108 2.59e-11 62.8
MS.gene88866.t1 AT4G36960 29.940 167 104 6 119 278 4 164 2.84e-11 66.2
MS.gene88866.t1 AT4G36960 29.940 167 104 6 119 278 4 164 2.84e-11 66.2
MS.gene88866.t1 AT5G03580 39.241 79 47 1 207 285 15 92 6.71e-11 60.1

Find 186 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCTGGCTGCAGGGCTTCC+TGG 0.125743 1.1:-70199981 MS.gene88866:CDS
CCCTGTCTTTGGAGCTGATA+TGG 0.234302 1.1:+70199807 None:intergenic
CATTTGCCCTAACCCTTTCC+TGG 0.256629 1.1:+70201287 None:intergenic
CTCCAAAGACAGGGTCAAAA+TGG 0.262200 1.1:-70199798 MS.gene88866:CDS
CATACCATGCGCTGATTGTC+TGG 0.263859 1.1:+70199462 None:intergenic
CCACCTCAGCCTGCTGGATT+TGG 0.272099 1.1:-70199888 MS.gene88866:CDS
CGCTCAGGTTGTTTCAATTA+GGG 0.273509 1.1:-70202700 MS.gene88866:CDS
TCGCTCAGGTTGTTTCAATT+AGG 0.283695 1.1:-70202701 MS.gene88866:CDS
CGCTGGCTGCAGGGCTTCCT+GGG 0.283699 1.1:-70199980 MS.gene88866:CDS
CCGATGACATTTGATGGTTC+TGG 0.284750 1.1:-70199558 MS.gene88866:CDS
CACATACACATTAGTGAACT+TGG 0.296288 1.1:+70201258 None:intergenic
GGGCTTCCTGGGTACCATCC+AGG 0.299327 1.1:-70199969 MS.gene88866:CDS
ATCCATGCCATTTCGATTGT+TGG 0.315102 1.1:+70199599 None:intergenic
ACTGCAGCAGCAGCTGAATC+TGG 0.336443 1.1:+70201100 None:intergenic
GGAATGGCACCGCTGGCTGC+AGG 0.341384 1.1:-70199990 MS.gene88866:CDS
TACCGCTTTATTTGCTTCCT+CGG 0.346237 1.1:+70200616 None:intergenic
TTGGAACTGTAACATCTTGC+AGG 0.347871 1.1:-70200868 MS.gene88866:CDS
CCCTGGTGGAATGGCACCGC+TGG 0.351683 1.1:-70199997 MS.gene88866:CDS
CAACCAAGGGTATAGATATA+TGG 0.354482 1.1:-70199622 MS.gene88866:CDS
CATGGTCATAGCAAGGGTTC+TGG 0.362998 1.1:-70200659 MS.gene88866:CDS
TTCGCCACCAGGAAAGGGTT+AGG 0.366316 1.1:-70201294 MS.gene88866:CDS
AATGGGAAATCTAGATGCTT+TGG 0.369454 1.1:-70201142 MS.gene88866:CDS
AAAGGTCTCTGAGGCATTGC+AGG 0.369465 1.1:-70198893 MS.gene88866:CDS
GCTGCAGTTGAGAAGTTAAA+TGG 0.370195 1.1:-70201085 MS.gene88866:CDS
ACCTTTGCAGTATGTTGGTT+TGG 0.374003 1.1:+70198988 None:intergenic
CATGCCATCCAACTGTTTGA+TGG 0.376643 1.1:+70201354 None:intergenic
GCCCCTCAGCAGTTGTATTA+CGG 0.376872 1.1:-70199933 MS.gene88866:CDS
AGAGAGGAAGGCTCAGTTGC+AGG 0.377439 1.1:-70200447 MS.gene88866:intron
TGAGAAAACATGATACGAAT+AGG 0.384527 1.1:+70201577 None:intergenic
TGGCCCTGTACTTTCTTGTA+AGG 0.384907 1.1:-70201452 MS.gene88866:CDS
CGGATAGGTGCTCGACGAAA+TGG 0.388336 1.1:-70199771 MS.gene88866:CDS
ATGTTGCCGATGACATTTGA+TGG 0.389353 1.1:-70199564 MS.gene88866:CDS
CAGGAAAGGGTTAGGGCAAA+TGG 0.395505 1.1:-70201286 MS.gene88866:CDS
GGCTTCCTGGGTACCATCCA+GGG 0.399660 1.1:-70199968 MS.gene88866:CDS
GACAGTAATGGTCAGTCAAA+AGG 0.400879 1.1:-70201421 MS.gene88866:CDS
GGGGCAAGTCTTGGTGCCCC+TGG 0.404417 1.1:+70199951 None:intergenic
GCAACACCAGGCCGCATTCC+AGG 0.405751 1.1:+70199846 None:intergenic
TTCCAGCAGCAGATCTTGCC+TGG 0.414251 1.1:-70199864 MS.gene88866:CDS
CCGGTCAATGCTGCCGTCGC+CGG 0.426455 1.1:+70202810 None:intergenic
ATGATAAACAAGTCTATGTT+GGG 0.427846 1.1:-70201324 MS.gene88866:CDS
CTCAACGTGATCCAAGTGTT+CGG 0.429454 1.1:-70201558 MS.gene88866:CDS
CTCAACTTCACTCCTCTGAA+TGG 0.432562 1.1:-70201604 MS.gene88866:CDS
TGATATGGCATAACAAAATT+CGG 0.436617 1.1:+70199822 None:intergenic
GATTCTGCTGCACATGTTGG+AGG 0.441316 1.1:+70199745 None:intergenic
AAAGCCTTTGTTTGTTGCTG+TGG 0.442545 1.1:-70200483 MS.gene88866:CDS
TGGCCATATATCTATACCCT+TGG 0.446363 1.1:+70199619 None:intergenic
ATCTTGCCTGGAATGCGGCC+TGG 0.447751 1.1:-70199852 MS.gene88866:CDS
GTTGCATTATTAGGTGATGT+TGG 0.448677 1.1:-70200687 MS.gene88866:intron
GCCATATCAGCTCCAAAGAC+AGG 0.451036 1.1:-70199808 MS.gene88866:CDS
AATTCTTTCCTGCTCGAACT+TGG 0.452537 1.1:+70200985 None:intergenic
CAAGTCTTGGTGCCCCTGGA+TGG 0.453330 1.1:+70199955 None:intergenic
TGCTTCCTCGGGAGTAGAAA+AGG 0.455695 1.1:+70200628 None:intergenic
ACAGTCATGAAAGATGCAAA+TGG 0.458938 1.1:-70201160 MS.gene88866:CDS
CCCTGTACTTTCTTGTAAGG+TGG 0.459223 1.1:-70201449 MS.gene88866:CDS
TTGTTTCAATTAGGGTCTGT+AGG 0.459272 1.1:-70202692 MS.gene88866:CDS
GTCTCCGAATGTGGTGGCTC+CGG 0.462851 1.1:-70202829 MS.gene88866:CDS
GACAGGGATGTTGCTTGAAA+TGG 0.465292 1.1:-70198965 MS.gene88866:CDS
AATGATAAACAAGTCTATGT+TGG 0.465684 1.1:-70201325 MS.gene88866:CDS
CCTGGACGCTGATTATCAAT+AGG 0.467031 1.1:+70199522 None:intergenic
TTCATACCACCTCAGCCTGC+TGG 0.468479 1.1:-70199894 MS.gene88866:CDS
GTCGCCGGAGCCACCACATT+CGG 0.473001 1.1:+70202825 None:intergenic
CCGGCGACGGCAGCATTGAC+CGG 0.477791 1.1:-70202810 MS.gene88866:CDS
GTCCTTCATGAAGCTGCATC+GGG 0.478100 1.1:-70198871 MS.gene88866:CDS
ACCGCTTTATTTGCTTCCTC+GGG 0.479649 1.1:+70200617 None:intergenic
GCCAGCGGTGCCATTCCACC+AGG 0.481094 1.1:+70199996 None:intergenic
CTGTCACCTTTGCAGTATGT+TGG 0.481467 1.1:+70198983 None:intergenic
TAGCAAGGGTTCTGGTTTCG+TGG 0.481599 1.1:-70200651 MS.gene88866:CDS
TCAACTTCACTCCTCTGAAT+GGG 0.482554 1.1:-70201603 MS.gene88866:CDS
GAATGTGGTGGCTCCGGCGA+CGG 0.484230 1.1:-70202823 MS.gene88866:CDS
AACTGCTGAGGGGCAAGTCT+TGG 0.488367 1.1:+70199942 None:intergenic
TATATGGCCAACAATCGAAA+TGG 0.488751 1.1:-70199606 MS.gene88866:CDS
TTCCAGGCAAGATCTGCTGC+TGG 0.488761 1.1:+70199862 None:intergenic
GCACTAGTTATCTTGCCAAA+GGG 0.490127 1.1:+70201184 None:intergenic
GTTGAGAAGTTCCTTTGCAT+TGG 0.492750 1.1:+70201621 None:intergenic
CAACATACTGCAAAGGTGAC+AGG 0.494098 1.1:-70198982 MS.gene88866:CDS
GAATGGCACCGCTGGCTGCA+GGG 0.495319 1.1:-70199989 MS.gene88866:CDS
TCCAAAGACAGGGTCAAAAT+GGG 0.497020 1.1:-70199797 MS.gene88866:CDS
CAGACTAGGCGATCCTCTCT+TGG 0.498348 1.1:-70202666 MS.gene88866:CDS
TGTTTCAATTAGGGTCTGTA+GGG 0.499273 1.1:-70202691 MS.gene88866:CDS
CAATGTGTTCATTAAGAACC+TGG 0.502190 1.1:-70201521 MS.gene88866:CDS
CCTATTGATAATCAGCGTCC+AGG 0.504071 1.1:-70199522 MS.gene88866:CDS
TCGCCACCAGGAAAGGGTTA+GGG 0.506036 1.1:-70201293 MS.gene88866:CDS
AATCCGTTCCCCTGGTGGAA+TGG 0.506540 1.1:-70200006 MS.gene88866:CDS
TGTGATCAATTGATGTGTCC+AGG 0.506638 1.1:+70201503 None:intergenic
CGCATTCGCGAACAGTCCTC+CGG 0.507005 1.1:+70202791 None:intergenic
GATCCAAGTGTTCGGAAAAG+TGG 0.507647 1.1:-70201550 MS.gene88866:CDS
TCTGTTTAGCCAAGTCGCTC+AGG 0.509218 1.1:-70202715 MS.gene88866:CDS
CTTGATTCTGCTGCACATGT+TGG 0.509410 1.1:+70199742 None:intergenic
GTCCAGTTGAATGAAATGAA+TGG 0.510076 1.1:-70200521 MS.gene88866:intron
TTTGCTCAAATCCGTTCCCC+TGG 0.511063 1.1:-70200014 MS.gene88866:CDS
AGTGTTCGGAAAAGTGGATC+GGG 0.517337 1.1:-70201544 MS.gene88866:CDS
ATACCATGCGCTGATTGTCT+GGG 0.517628 1.1:+70199463 None:intergenic
GGTCCTTCATGAAGCTGCAT+CGG 0.518569 1.1:-70198872 MS.gene88866:CDS
ACAGTAATGGTCAGTCAAAA+GGG 0.518664 1.1:-70201420 MS.gene88866:CDS
TCAAATGTCATCGGCAACAT+TGG 0.519004 1.1:+70199567 None:intergenic
AACAGATATGAGAAATTGCA+AGG 0.520125 1.1:-70200962 MS.gene88866:CDS
GGCTGAGGTGGTATGAAGCC+AGG 0.520624 1.1:+70199900 None:intergenic
TTTACGTTGGCGATCTCGAA+GGG 0.520934 1.1:-70202764 MS.gene88866:CDS
TGTCAACTTCACCAATGCTC+AGG 0.521040 1.1:-70202634 MS.gene88866:CDS
CATATATCTATACCCTTGGT+TGG 0.521460 1.1:+70199623 None:intergenic
TCTGAAGTTGGTGATCAGCT+TGG 0.524358 1.1:-70198847 MS.gene88866:CDS
GAATGAAATGAATGGAAAGT+TGG 0.530915 1.1:-70200513 MS.gene88866:CDS
GTGCCATTCCACCAGGGGAA+CGG 0.531086 1.1:+70200003 None:intergenic
GCCACCTTACAAGAAAGTAC+AGG 0.531089 1.1:+70201448 None:intergenic
TGCACTAGTTATCTTGCCAA+AGG 0.533023 1.1:+70201183 None:intergenic
CAGTCATGAAAGATGCAAAT+GGG 0.535240 1.1:-70201159 MS.gene88866:CDS
CTTTACGTTGGCGATCTCGA+AGG 0.535531 1.1:-70202765 MS.gene88866:CDS
CCAAATCCAGCAGGCTGAGG+TGG 0.536975 1.1:+70199888 None:intergenic
TGCTGGAAACCAAATCCAGC+AGG 0.541904 1.1:+70199879 None:intergenic
TATTACGGTCAAGGCACACC+TGG 0.547147 1.1:-70199918 MS.gene88866:CDS
GGTGCCCCTGGATGGTACCC+AGG 0.551085 1.1:+70199963 None:intergenic
AATGGTCAGTCAAAAGGGTA+TGG 0.555474 1.1:-70201415 MS.gene88866:CDS
TTGAAACAACCTGAGCGACT+TGG 0.559301 1.1:+70202706 None:intergenic
CGAATAGGTTTCCCATTCAG+AGG 0.559642 1.1:+70201592 None:intergenic
GCTTCCTGGGTACCATCCAG+GGG 0.561102 1.1:-70199967 MS.gene88866:CDS
ACATACACATTAGTGAACTT+GGG 0.561743 1.1:+70201259 None:intergenic
ACAAAATTCGGAGCAACACC+AGG 0.561825 1.1:+70199834 None:intergenic
CCAGGAAGCCCTGCAGCCAG+CGG 0.562572 1.1:+70199981 None:intergenic
GCTCAAATCCGTTCCCCTGG+TGG 0.562712 1.1:-70200011 MS.gene88866:CDS
CGAAATGGCATGGATCTAGC+AGG 0.564881 1.1:-70199591 MS.gene88866:CDS
GGATTCACATGGTCATAGCA+AGG 0.565505 1.1:-70200666 MS.gene88866:CDS
GGTCAAAATGGGCAACGGAT+AGG 0.565521 1.1:-70199786 MS.gene88866:CDS
AATTGAAATTATCAGATGCT+CGG 0.569025 1.1:-70199045 MS.gene88866:intron
TAAGATGAATCACTTCGGAT+TGG 0.570286 1.1:+70198941 None:intergenic
GGCCAACAATCGAAATGGCA+TGG 0.570608 1.1:-70199601 MS.gene88866:CDS
TTCAATAAGATGAATCACTT+CGG 0.573383 1.1:+70198936 None:intergenic
AAACTCACCATCCTGAGCAT+TGG 0.573445 1.1:+70202623 None:intergenic
TTGCATCGTAACTCCAACCA+AGG 0.573794 1.1:-70199636 MS.gene88866:CDS
GACCGTAATACAACTGCTGA+GGG 0.575479 1.1:+70199931 None:intergenic
ATCCCGATGCAGCTTCATGA+AGG 0.575668 1.1:+70198869 None:intergenic
GAGGCAAGTGATGTAGACCC+TGG 0.581109 1.1:+70199504 None:intergenic
AAGTGTTCGGAAAAGTGGAT+CGG 0.582522 1.1:-70201545 MS.gene88866:CDS
CAGCAGTTGTATTACGGTCA+AGG 0.584506 1.1:-70199927 MS.gene88866:CDS
GGCTGCGATTTCATCACCGA+TGG 0.587268 1.1:-70202856 MS.gene88866:CDS
TGGAACTGTAACATCTTGCA+GGG 0.587771 1.1:-70200867 MS.gene88866:intron
AAACCAAATCCAGCAGGCTG+AGG 0.590059 1.1:+70199885 None:intergenic
GACATAAGCGTAACCAAGAG+AGG 0.592663 1.1:+70202653 None:intergenic
CCAGAACCATCAAATGTCAT+CGG 0.594053 1.1:+70199558 None:intergenic
CCATATCAGCTCCAAAGACA+GGG 0.596118 1.1:-70199807 MS.gene88866:CDS
AACATACTGCAAAGGTGACA+GGG 0.597579 1.1:-70198981 MS.gene88866:CDS
GTTGAAAGCCAAGTTCGAGC+AGG 0.598139 1.1:-70200993 MS.gene88866:CDS
CTATTGATAATCAGCGTCCA+GGG 0.600399 1.1:-70199521 MS.gene88866:CDS
CACTAGTTATCTTGCCAAAG+GGG 0.600793 1.1:+70201185 None:intergenic
GCTGCATCGGGATCTGAAGT+TGG 0.602004 1.1:-70198859 MS.gene88866:CDS
TTCTGAAGCATCAACTGATG+AGG 0.602081 1.1:-70201227 MS.gene88866:CDS
GATTCACATGGTCATAGCAA+GGG 0.602587 1.1:-70200665 MS.gene88866:CDS
TCAGCGCAAAGAAGAGAGGA+AGG 0.604652 1.1:-70200459 MS.gene88866:CDS
AAAGAGTGCCATCAAACAGT+TGG 0.606237 1.1:-70201362 MS.gene88866:CDS
AGCAGATCTTGCCTGGAATG+CGG 0.606792 1.1:-70199857 MS.gene88866:CDS
GACAGGGTCAAAATGGGCAA+CGG 0.607936 1.1:-70199791 MS.gene88866:CDS
GATGGTTCAGTCTCCGAATG+TGG 0.608912 1.1:-70202838 MS.gene88866:CDS
CAGCGGTGCCATTCCACCAG+GGG 0.613136 1.1:+70199998 None:intergenic
CCACCTTACAAGAAAGTACA+GGG 0.613727 1.1:+70201449 None:intergenic
AACTTCACCAATGCTCAGGA+TGG 0.614190 1.1:-70202630 MS.gene88866:intron
TGAAATGAATGGAAAGTTGG+TGG 0.617759 1.1:-70200510 MS.gene88866:CDS
TTGGTGTAAGACAGTCCACA+AGG 0.620718 1.1:+70199007 None:intergenic
TGAGCCACAGCAACAAACAA+AGG 0.620998 1.1:+70200479 None:intergenic
GCGAATGCGTCACTTTACGT+TGG 0.621564 1.1:-70202777 MS.gene88866:CDS
GGTTCAGTCTCCGAATGTGG+TGG 0.623008 1.1:-70202835 MS.gene88866:CDS
AGTGCCATCAAACAGTTGGA+TGG 0.623280 1.1:-70201358 MS.gene88866:CDS
ACAGATATGAGAAATTGCAA+GGG 0.623843 1.1:-70200961 MS.gene88866:CDS
TGGCTCAGCGCAAAGAAGAG+AGG 0.624005 1.1:-70200463 MS.gene88866:CDS
GGGTCTGTAGGGATCAGACT+AGG 0.624207 1.1:-70202680 MS.gene88866:CDS
TGACCGTAATACAACTGCTG+AGG 0.627393 1.1:+70199930 None:intergenic
AACTGCTATCAATGATGACA+AGG 0.629314 1.1:-70201062 MS.gene88866:CDS
ACATTCGGAGACTGAACCAT+CGG 0.635247 1.1:+70202840 None:intergenic
TTGCCCTAACCCTTTCCTGG+TGG 0.635698 1.1:+70201290 None:intergenic
ACCAAACCAACATACTGCAA+AGG 0.637186 1.1:-70198989 MS.gene88866:CDS
GAAATGAATGGAAAGTTGGT+GGG 0.639653 1.1:-70200509 MS.gene88866:CDS
TACCATGCGCTGATTGTCTG+GGG 0.640655 1.1:+70199464 None:intergenic
GGACACATCAATTGATCACA+AGG 0.641302 1.1:-70201500 MS.gene88866:CDS
TAGGTGATGTTGGATTCACA+TGG 0.645055 1.1:-70200677 MS.gene88866:CDS
TGAACATCTATATCCCCTTG+TGG 0.645248 1.1:-70199022 MS.gene88866:CDS
TACCCCAGACAATCAGCGCA+TGG 0.646578 1.1:-70199466 MS.gene88866:intron
GGTAGCAGAAGCTAAAGCAG+AGG 0.647511 1.1:+70199485 None:intergenic
CCAGCGGTGCCATTCCACCA+GGG 0.647668 1.1:+70199997 None:intergenic
TATTTGTGGGGAGGGCTCAG+AGG 0.651975 1.1:-70201036 MS.gene88866:CDS
CTCGAAGGGAGTGTGAACGA+AGG 0.652910 1.1:-70202750 MS.gene88866:CDS
CAGATATGAGAAATTGCAAG+GGG 0.659567 1.1:-70200960 MS.gene88866:CDS
GGTGTAAGACAGTCCACAAG+GGG 0.660676 1.1:+70199009 None:intergenic
AAGGTGGCTCTTGACAGTAA+TGG 0.676259 1.1:-70201433 MS.gene88866:CDS
TCCCGAGGAAGCAAATAAAG+CGG 0.679076 1.1:-70200618 MS.gene88866:intron
GCGACGGCAGCATTGACCGG+AGG 0.692922 1.1:-70202807 MS.gene88866:CDS
TGGTGTAAGACAGTCCACAA+GGG 0.698176 1.1:+70199008 None:intergenic
TGCATCGTAACTCCAACCAA+GGG 0.699834 1.1:-70199635 MS.gene88866:CDS
ACCGTAATACAACTGCTGAG+GGG 0.736849 1.1:+70199932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAATAAATGTTTAAA+GGG + chr1.1:70201584-70201603 None:intergenic 10.0%
!! TAGTTATTAAAAATATCTTA+TGG - chr1.1:70199992-70200011 MS.gene88866:CDS 10.0%
!! TGTTTGAATAATTTAATTAA+AGG + chr1.1:70202351-70202370 None:intergenic 10.0%
!!! ATCATTTTCTTAAAATTTTA+TGG + chr1.1:70199428-70199447 None:intergenic 10.0%
!!! TATTAATTTGTATTATTTGA+CGG - chr1.1:70199838-70199857 MS.gene88866:CDS 10.0%
!! AAAAATCAAGAAACAAAAAT+AGG + chr1.1:70200036-70200055 None:intergenic 15.0%
!! AAAAATGAATATTTCAACAA+AGG + chr1.1:70201367-70201386 None:intergenic 15.0%
!! AAAGATCAAACAAATTAATT+TGG + chr1.1:70199094-70199113 None:intergenic 15.0%
!! AAATTATATGTTGCATTATT+AGG - chr1.1:70200987-70201006 MS.gene88866:CDS 15.0%
!! CATAATAATTAATATATGGA+TGG - chr1.1:70199946-70199965 MS.gene88866:CDS 15.0%
!! CATCCATAATAATTAATATA+TGG - chr1.1:70199942-70199961 MS.gene88866:CDS 15.0%
!! CATCCATATATTAATTATTA+TGG + chr1.1:70199948-70199967 None:intergenic 15.0%
!! GAAAGTAAATAAATGTTTAA+AGG + chr1.1:70201585-70201604 None:intergenic 15.0%
!! TTATAAATTAACTGATACAA+AGG + chr1.1:70202580-70202599 None:intergenic 15.0%
!!! TATTCATTTTTGCTTATAAT+TGG - chr1.1:70201430-70201449 MS.gene88866:CDS 15.0%
!! AATAAATGTTTAAAGGGAAA+CGG + chr1.1:70201578-70201597 None:intergenic 20.0%
!! AATAGATACAACTATAAACA+AGG + chr1.1:70199742-70199761 None:intergenic 20.0%
!! ATAAAATTGACCAGTAAAAA+AGG + chr1.1:70200947-70200966 None:intergenic 20.0%
!! ATAAATACATAAAAATGGGT+TGG + chr1.1:70199776-70199795 None:intergenic 20.0%
!! ATGATATGAATAATGAATCT+CGG + chr1.1:70199657-70199676 None:intergenic 20.0%
!! ATTAAAGGATTAAAATTGTG+AGG + chr1.1:70202336-70202355 None:intergenic 20.0%
!! TCATATGCATAATTTAAACA+CGG - chr1.1:70202443-70202462 MS.gene88866:intron 20.0%
!! TCTAATAAGTCATTCTATAT+AGG + chr1.1:70199628-70199647 None:intergenic 20.0%
!!! ACTTGTTTTCTATTTTTTCT+TGG - chr1.1:70202511-70202530 MS.gene88866:intron 20.0%
!!! TTAACTGTTTCTTGTTAATT+TGG - chr1.1:70199133-70199152 MS.gene88866:intron 20.0%
! AATAAATATATGCAGAGAGA+CGG + chr1.1:70200866-70200885 None:intergenic 25.0%
! AATGATAAACAAGTCTATGT+TGG - chr1.1:70200358-70200377 MS.gene88866:intron 25.0%
! AATTGAAATTATCAGATGCT+CGG - chr1.1:70202638-70202657 MS.gene88866:CDS 25.0%
! ATAAATGTTTAAAGGGAAAC+GGG + chr1.1:70201577-70201596 None:intergenic 25.0%
! ATCATCTATGTGTTGTAATT+TGG - chr1.1:70199184-70199203 MS.gene88866:intron 25.0%
! ATGATAAACAAGTCTATGTT+GGG - chr1.1:70200359-70200378 MS.gene88866:intron 25.0%
! ATGTTCCTTTCTCAAATTAT+CGG + chr1.1:70199322-70199341 None:intergenic 25.0%
! ATTGTTTCCTTAGAGTAAAT+TGG - chr1.1:70202284-70202303 MS.gene88866:intron 25.0%
! GTATATAATGCACACAAAAA+AGG + chr1.1:70200914-70200933 None:intergenic 25.0%
! TGATATGGCATAACAAAATT+CGG + chr1.1:70201864-70201883 None:intergenic 25.0%
! TTCAATAAGATGAATCACTT+CGG + chr1.1:70202750-70202769 None:intergenic 25.0%
! TTTAACGGCATATTAATGTT+GGG - chr1.1:70199796-70199815 MS.gene88866:CDS 25.0%
!! AAAGATCTATTTTCTGAGTT+TGG - chr1.1:70200796-70200815 MS.gene88866:intron 25.0%
!! GTGTGAGAAATGTAATTTTT+CGG - chr1.1:70202607-70202626 MS.gene88866:intron 25.0%
!! TTTTAACGGCATATTAATGT+TGG - chr1.1:70199795-70199814 MS.gene88866:CDS 25.0%
!!! CATTTGGTATTTTTACATGT+AGG - chr1.1:70202253-70202272 MS.gene88866:intron 25.0%
!!! TAACAAGTTATTTTCTCTGT+AGG - chr1.1:70201641-70201660 MS.gene88866:intron 25.0%
!!! TTTGTTTCTTGATTTTTCAG+CGG - chr1.1:70200039-70200058 MS.gene88866:intron 25.0%
AACAGATATGAGAAATTGCA+AGG - chr1.1:70200721-70200740 MS.gene88866:intron 30.0%
AATCCAGATGAACAATTGTA+AGG - chr1.1:70199699-70199718 MS.gene88866:intron 30.0%
ACAGATATGAGAAATTGCAA+GGG - chr1.1:70200722-70200741 MS.gene88866:intron 30.0%
ACATACACATTAGTGAACTT+GGG + chr1.1:70200427-70200446 None:intergenic 30.0%
ATGAACAATTGTAAGGATGA+AGG - chr1.1:70199706-70199725 MS.gene88866:intron 30.0%
ATTGTACAAAGCTAAGTGTT+GGG - chr1.1:70199580-70199599 MS.gene88866:CDS 30.0%
ATTTACTTTCACAGTTCTCA+TGG - chr1.1:70201595-70201614 MS.gene88866:CDS 30.0%
CAGAATACCAATTTACTCTA+AGG + chr1.1:70202294-70202313 None:intergenic 30.0%
GAATGAAATGAATGGAAAGT+TGG - chr1.1:70201170-70201189 MS.gene88866:CDS 30.0%
GAGCATCTGATAATTTCAAT+TGG + chr1.1:70202639-70202658 None:intergenic 30.0%
TGAGAAAACATGATACGAAT+AGG + chr1.1:70200109-70200128 None:intergenic 30.0%
TGGCTATAGCTTATAATTAG+TGG - chr1.1:70201327-70201346 MS.gene88866:CDS 30.0%
TGGTATGTATAAGTTGCATT+TGG - chr1.1:70202237-70202256 MS.gene88866:intron 30.0%
TTAACGGCATATTAATGTTG+GGG - chr1.1:70199797-70199816 MS.gene88866:CDS 30.0%
TTCATTATTAAGTAGCTGAC+TGG - chr1.1:70201307-70201326 MS.gene88866:CDS 30.0%
TTCCATTCATTTCATTCAAC+TGG + chr1.1:70201167-70201186 None:intergenic 30.0%
TTGAGGTACATTACTAACTA+AGG - chr1.1:70202472-70202491 MS.gene88866:intron 30.0%
TTTAAACACGGATCAAATTG+AGG - chr1.1:70202455-70202474 MS.gene88866:intron 30.0%
! AAATTTGTGCACAGATTTTG+TGG + chr1.1:70199883-70199902 None:intergenic 30.0%
! AATCGTCATCAAGATTTTTC+AGG + chr1.1:70200759-70200778 None:intergenic 30.0%
! ACTGTTGTTATCATAGGTTT+TGG - chr1.1:70199969-70199988 MS.gene88866:CDS 30.0%
!! ATATTAATGTTGGGGGTATT+AGG - chr1.1:70199805-70199824 MS.gene88866:CDS 30.0%
!! TCTAAGTTTTATCAACCATG+AGG + chr1.1:70201549-70201568 None:intergenic 30.0%
!!! ATGACAAGGTTTTATTTGTG+GGG - chr1.1:70200635-70200654 MS.gene88866:CDS 30.0%
!!! CTCAGAGACCTTTATTTTTA+GGG + chr1.1:70202783-70202802 None:intergenic 30.0%
!!! GATGACAAGGTTTTATTTGT+GGG - chr1.1:70200634-70200653 MS.gene88866:CDS 30.0%
!!! TGATGACAAGGTTTTATTTG+TGG - chr1.1:70200633-70200652 MS.gene88866:CDS 30.0%
!!! TTCCAACATACCTTTTTTAC+TGG - chr1.1:70200934-70200953 MS.gene88866:CDS 30.0%
AACTGCTATCAATGATGACA+AGG - chr1.1:70200621-70200640 MS.gene88866:CDS 35.0%
AATGGGAAATCTAGATGCTT+TGG - chr1.1:70200541-70200560 MS.gene88866:intron 35.0%
ACAGTAATGGTCAGTCAAAA+GGG - chr1.1:70200263-70200282 MS.gene88866:intron 35.0%
ACAGTCATGAAAGATGCAAA+TGG - chr1.1:70200523-70200542 MS.gene88866:intron 35.0%
ATTGTGATCATGTGTCATGT+TGG - chr1.1:70199347-70199366 MS.gene88866:intron 35.0%
ATTTGTGTCCATGTTATGTC+CGG + chr1.1:70199397-70199416 None:intergenic 35.0%
CAATGTGTTCATTAAGAACC+TGG - chr1.1:70200162-70200181 MS.gene88866:intron 35.0%
CACATACACATTAGTGAACT+TGG + chr1.1:70200428-70200447 None:intergenic 35.0%
CAGATATGAGAAATTGCAAG+GGG - chr1.1:70200723-70200742 MS.gene88866:intron 35.0%
CAGTCATGAAAGATGCAAAT+GGG - chr1.1:70200524-70200543 MS.gene88866:intron 35.0%
CATATATCTATACCCTTGGT+TGG + chr1.1:70202063-70202082 None:intergenic 35.0%
CATCCTTACAATTGTTCATC+TGG + chr1.1:70199705-70199724 None:intergenic 35.0%
CATTCCTTTATGAATCCTCA+TGG - chr1.1:70201531-70201550 MS.gene88866:CDS 35.0%
CATTGTACAAAGCTAAGTGT+TGG - chr1.1:70199579-70199598 MS.gene88866:CDS 35.0%
CCTAAAAATAAAGGTCTCTG+AGG - chr1.1:70202781-70202800 MS.gene88866:CDS 35.0%
GTAATCACAAGTGTCAGTAT+CGG - chr1.1:70199458-70199477 MS.gene88866:intron 35.0%
GTCCAGTTGAATGAAATGAA+TGG - chr1.1:70201162-70201181 MS.gene88866:CDS 35.0%
GTTGCATTATTAGGTGATGT+TGG - chr1.1:70200996-70201015 MS.gene88866:CDS 35.0%
TAACGGCATATTAATGTTGG+GGG - chr1.1:70199798-70199817 MS.gene88866:CDS 35.0%
TAAGATGAATCACTTCGGAT+TGG + chr1.1:70202745-70202764 None:intergenic 35.0%
TATATGGCCAACAATCGAAA+TGG - chr1.1:70202077-70202096 MS.gene88866:intron 35.0%
TCAACCATGAGGATTCATAA+AGG + chr1.1:70201538-70201557 None:intergenic 35.0%
TGAAATGAATGGAAAGTTGG+TGG - chr1.1:70201173-70201192 MS.gene88866:CDS 35.0%
TGTTGGACACTAACATGTAT+CGG - chr1.1:70199364-70199383 MS.gene88866:intron 35.0%
TGTTTCAATTAGGGTCTGTA+GGG - chr1.1:70198992-70199011 MS.gene88866:CDS 35.0%
TTGTTTCAATTAGGGTCTGT+AGG - chr1.1:70198991-70199010 MS.gene88866:CDS 35.0%
! AAGAATCTTTGTAGCATCGA+AGG + chr1.1:70199556-70199575 None:intergenic 35.0%
! ACGTCTTCAATAAGAAGTGT+CGG - chr1.1:70199507-70199526 MS.gene88866:CDS 35.0%
! CAACCAAGGGTATAGATATA+TGG - chr1.1:70202061-70202080 MS.gene88866:intron 35.0%
! GAAATGAATGGAAAGTTGGT+GGG - chr1.1:70201174-70201193 MS.gene88866:CDS 35.0%
! GACCAGTAAAAAAGGTATGT+TGG + chr1.1:70200939-70200958 None:intergenic 35.0%
! GAGGACTTGAAACAACTTTT+TGG - chr1.1:70200475-70200494 MS.gene88866:CDS 35.0%
!! GTTACTCCTTTTGCCATTTA+TGG - chr1.1:70202377-70202396 MS.gene88866:intron 35.0%
!! TCCTTTTGCCATTTATGGTA+GGG - chr1.1:70202382-70202401 MS.gene88866:intron 35.0%
!!! ACCTTTATTTTTAGGGCATC+GGG + chr1.1:70202776-70202795 None:intergenic 35.0%
!!! CCTCAGAGACCTTTATTTTT+AGG + chr1.1:70202784-70202803 None:intergenic 35.0%
!!! GACCTTTATTTTTAGGGCAT+CGG + chr1.1:70202777-70202796 None:intergenic 35.0%
AACATACTGCAAAGGTGACA+GGG - chr1.1:70202702-70202721 MS.gene88866:CDS 40.0%
AAGTGTTCGGAAAAGTGGAT+CGG - chr1.1:70200138-70200157 MS.gene88866:intron 40.0%
AATGGTCAGTCAAAAGGGTA+TGG - chr1.1:70200268-70200287 MS.gene88866:intron 40.0%
AATTCTTTCCTGCTCGAACT+TGG + chr1.1:70200701-70200720 None:intergenic 40.0%
ACCAAACCAACATACTGCAA+AGG - chr1.1:70202694-70202713 MS.gene88866:CDS 40.0%
ACCCTACCATAAATGGCAAA+AGG + chr1.1:70202386-70202405 None:intergenic 40.0%
ACTTTCACAGTTCTCATGGT+CGG - chr1.1:70201599-70201618 MS.gene88866:CDS 40.0%
ATACTACACATGTCAGACAC+CGG - chr1.1:70199481-70199500 MS.gene88866:CDS 40.0%
ATGCTAGACCCTACCATAAA+TGG + chr1.1:70202393-70202412 None:intergenic 40.0%
ATGTTGCCGATGACATTTGA+TGG - chr1.1:70202119-70202138 MS.gene88866:intron 40.0%
CACTAGTTATCTTGCCAAAG+GGG + chr1.1:70200501-70200520 None:intergenic 40.0%
CCACACCGATAATTTGAGAA+AGG - chr1.1:70199314-70199333 MS.gene88866:intron 40.0%
CCAGAACCATCAAATGTCAT+CGG + chr1.1:70202128-70202147 None:intergenic 40.0%
CCTTTCTCAAATTATCGGTG+TGG + chr1.1:70199317-70199336 None:intergenic 40.0%
GACAGTAATGGTCAGTCAAA+AGG - chr1.1:70200262-70200281 MS.gene88866:intron 40.0%
GATTCACATGGTCATAGCAA+GGG - chr1.1:70201018-70201037 MS.gene88866:CDS 40.0%
GCACTAGTTATCTTGCCAAA+GGG + chr1.1:70200502-70200521 None:intergenic 40.0%
GCTGCAGTTGAGAAGTTAAA+TGG - chr1.1:70200598-70200617 MS.gene88866:intron 40.0%
GGACACATCAATTGATCACA+AGG - chr1.1:70200183-70200202 MS.gene88866:intron 40.0%
GGTAAGTATTCAAAGAAGCG+TGG - chr1.1:70201086-70201105 MS.gene88866:CDS 40.0%
GTTGAGAAGTTCCTTTGCAT+TGG + chr1.1:70200065-70200084 None:intergenic 40.0%
TAGGTGATGTTGGATTCACA+TGG - chr1.1:70201006-70201025 MS.gene88866:CDS 40.0%
TCAAATGTCATCGGCAACAT+TGG + chr1.1:70202119-70202138 None:intergenic 40.0%
TCAACTTCACTCCTCTGAAT+GGG - chr1.1:70200080-70200099 MS.gene88866:intron 40.0%
TCCAAAGACAGGGTCAAAAT+GGG - chr1.1:70201886-70201905 MS.gene88866:intron 40.0%
TCCCGATGCCCTAAAAATAA+AGG - chr1.1:70202772-70202791 MS.gene88866:CDS 40.0%
TGAACATCTATATCCCCTTG+TGG - chr1.1:70202661-70202680 MS.gene88866:CDS 40.0%
TGCACTAGTTATCTTGCCAA+AGG + chr1.1:70200503-70200522 None:intergenic 40.0%
TGGAACTGTAACATCTTGCA+GGG - chr1.1:70200816-70200835 MS.gene88866:intron 40.0%
TGGCCATATATCTATACCCT+TGG + chr1.1:70202067-70202086 None:intergenic 40.0%
TGTGATCAATTGATGTGTCC+AGG + chr1.1:70200183-70200202 None:intergenic 40.0%
TTCTTATTGAAGACGTGTCC+CGG + chr1.1:70199503-70199522 None:intergenic 40.0%
TTGGAACTGTAACATCTTGC+AGG - chr1.1:70200815-70200834 MS.gene88866:intron 40.0%
! AAAGCCTTTGTTTGTTGCTG+TGG - chr1.1:70201200-70201219 MS.gene88866:CDS 40.0%
! ACCTTTGCAGTATGTTGGTT+TGG + chr1.1:70202698-70202717 None:intergenic 40.0%
! ATCCATGCCATTTCGATTGT+TGG + chr1.1:70202087-70202106 None:intergenic 40.0%
! CCACCTTACAAGAAAGTACA+GGG + chr1.1:70200237-70200256 None:intergenic 40.0%
! CGCTCAGGTTGTTTCAATTA+GGG - chr1.1:70198983-70199002 MS.gene88866:CDS 40.0%
! CTATTGATAATCAGCGTCCA+GGG - chr1.1:70202162-70202181 MS.gene88866:intron 40.0%
! TCGCTCAGGTTGTTTCAATT+AGG - chr1.1:70198982-70199001 MS.gene88866:CDS 40.0%
!! AAACAACTTTTTGGCCCCTT+TGG - chr1.1:70200484-70200503 MS.gene88866:CDS 40.0%
!! AAAGAGTGCCATCAAACAGT+TGG - chr1.1:70200321-70200340 MS.gene88866:intron 40.0%
!! CTCCTTTTGCCATTTATGGT+AGG - chr1.1:70202381-70202400 MS.gene88866:intron 40.0%
!! GGATGGACTGTTGTTATCAT+AGG - chr1.1:70199963-70199982 MS.gene88866:CDS 40.0%
!! TAATGTTGGGGGTATTAGGT+TGG - chr1.1:70199809-70199828 MS.gene88866:CDS 40.0%
!! TACCGCTTTATTTGCTTCCT+CGG + chr1.1:70201070-70201089 None:intergenic 40.0%
!! TTCTGAAGCATCAACTGATG+AGG - chr1.1:70200456-70200475 MS.gene88866:CDS 40.0%
!!! ACAAGGTTTTATTTGTGGGG+AGG - chr1.1:70200638-70200657 MS.gene88866:CDS 40.0%
!!! CAAGGTTTTATTTGTGGGGA+GGG - chr1.1:70200639-70200658 MS.gene88866:CDS 40.0%
AAACTCACCATCCTGAGCAT+TGG + chr1.1:70199063-70199082 None:intergenic 45.0%
AACATGTATCGGACAGACAC+CGG - chr1.1:70199375-70199394 MS.gene88866:intron 45.0%
AACTTCACCAATGCTCAGGA+TGG - chr1.1:70199053-70199072 MS.gene88866:intron 45.0%
AAGGTGGCTCTTGACAGTAA+TGG - chr1.1:70200250-70200269 MS.gene88866:intron 45.0%
ACAAAATTCGGAGCAACACC+AGG + chr1.1:70201852-70201871 None:intergenic 45.0%
ACATTCGGAGACTGAACCAT+CGG + chr1.1:70198846-70198865 None:intergenic 45.0%
ACCGTAATACAACTGCTGAG+GGG + chr1.1:70201754-70201773 None:intergenic 45.0%
AGTGCCATCAAACAGTTGGA+TGG - chr1.1:70200325-70200344 MS.gene88866:intron 45.0%
AGTGTTCGGAAAAGTGGATC+GGG - chr1.1:70200139-70200158 MS.gene88866:intron 45.0%
CAACATACTGCAAAGGTGAC+AGG - chr1.1:70202701-70202720 MS.gene88866:CDS 45.0%
CAGCAGTTGTATTACGGTCA+AGG - chr1.1:70201756-70201775 MS.gene88866:intron 45.0%
CATGCCATCCAACTGTTTGA+TGG + chr1.1:70200332-70200351 None:intergenic 45.0%
CCATATCAGCTCCAAAGACA+GGG - chr1.1:70201876-70201895 MS.gene88866:intron 45.0%
CCCTGTACTTTCTTGTAAGG+TGG - chr1.1:70200234-70200253 MS.gene88866:intron 45.0%
CGAATAGGTTTCCCATTCAG+AGG + chr1.1:70200094-70200113 None:intergenic 45.0%
CTCAACGTGATCCAAGTGTT+CGG - chr1.1:70200125-70200144 MS.gene88866:intron 45.0%
CTCAACTTCACTCCTCTGAA+TGG - chr1.1:70200079-70200098 MS.gene88866:intron 45.0%
CTCCAAAGACAGGGTCAAAA+TGG - chr1.1:70201885-70201904 MS.gene88866:intron 45.0%
CTGTCACCTTTGCAGTATGT+TGG + chr1.1:70202703-70202722 None:intergenic 45.0%
CTTGATTCTGCTGCACATGT+TGG + chr1.1:70201944-70201963 None:intergenic 45.0%
GACATAAGCGTAACCAAGAG+AGG + chr1.1:70199033-70199052 None:intergenic 45.0%
GACCGTAATACAACTGCTGA+GGG + chr1.1:70201755-70201774 None:intergenic 45.0%
GATCCAAGTGTTCGGAAAAG+TGG - chr1.1:70200133-70200152 MS.gene88866:intron 45.0%
GGATTCACATGGTCATAGCA+AGG - chr1.1:70201017-70201036 MS.gene88866:CDS 45.0%
TACTACACATGTCAGACACC+GGG - chr1.1:70199482-70199501 MS.gene88866:CDS 45.0%
TCCCGAGGAAGCAAATAAAG+CGG - chr1.1:70201065-70201084 MS.gene88866:CDS 45.0%
TGACCGTAATACAACTGCTG+AGG + chr1.1:70201756-70201775 None:intergenic 45.0%
TGAGCCACAGCAACAAACAA+AGG + chr1.1:70201207-70201226 None:intergenic 45.0%
TGCATCGTAACTCCAACCAA+GGG - chr1.1:70202048-70202067 MS.gene88866:intron 45.0%
TGGCCCTGTACTTTCTTGTA+AGG - chr1.1:70200231-70200250 MS.gene88866:intron 45.0%
TGGTGTAAGACAGTCCACAA+GGG + chr1.1:70202678-70202697 None:intergenic 45.0%
TGTCAACTTCACCAATGCTC+AGG - chr1.1:70199049-70199068 MS.gene88866:intron 45.0%
TTGAAACAACCTGAGCGACT+TGG + chr1.1:70198980-70198999 None:intergenic 45.0%
TTGCATCGTAACTCCAACCA+AGG - chr1.1:70202047-70202066 MS.gene88866:intron 45.0%
TTGGTGTAAGACAGTCCACA+AGG + chr1.1:70202679-70202698 None:intergenic 45.0%
TTTACGTTGGCGATCTCGAA+GGG - chr1.1:70198919-70198938 MS.gene88866:CDS 45.0%
! ATGGTCGGTTGACTGTGTTT+TGG - chr1.1:70201614-70201633 MS.gene88866:CDS 45.0%
! CATGACACTTTTGCTGCGTT+TGG - chr1.1:70200211-70200230 MS.gene88866:intron 45.0%
! CCGATGACATTTGATGGTTC+TGG - chr1.1:70202125-70202144 MS.gene88866:intron 45.0%
! CCTATTGATAATCAGCGTCC+AGG - chr1.1:70202161-70202180 MS.gene88866:intron 45.0%
! CCTGGACGCTGATTATCAAT+AGG + chr1.1:70202164-70202183 None:intergenic 45.0%
! GACAGGGATGTTGCTTGAAA+TGG - chr1.1:70202718-70202737 MS.gene88866:CDS 45.0%
! GCCACCTTACAAGAAAGTAC+AGG + chr1.1:70200238-70200257 None:intergenic 45.0%
! TTTTGTTCGCCACCAGGAAA+GGG - chr1.1:70200384-70200403 MS.gene88866:intron 45.0%
! TTTTTGTTCGCCACCAGGAA+AGG - chr1.1:70200383-70200402 MS.gene88866:intron 45.0%
!! ACCGCTTTATTTGCTTCCTC+GGG + chr1.1:70201069-70201088 None:intergenic 45.0%
!! ATACCATGCGCTGATTGTCT+GGG + chr1.1:70202223-70202242 None:intergenic 45.0%
!! GATCCACTTTTCCGAACACT+TGG + chr1.1:70200139-70200158 None:intergenic 45.0%
!! TCTGAAGTTGGTGATCAGCT+TGG - chr1.1:70202836-70202855 MS.gene88866:CDS 45.0%
!! TTTTTCAGCGGCCAATGCAA+AGG - chr1.1:70200051-70200070 MS.gene88866:intron 45.0%
!! TAAAATAAATACATAAAAAT+GGG + chr1.1:70199780-70199799 None:intergenic 5.0%
!! TTAAAATAAATACATAAAAA+TGG + chr1.1:70199781-70199800 None:intergenic 5.0%
!!! TTTTTATGTATTTATTTTAA+CGG - chr1.1:70199781-70199800 MS.gene88866:CDS 5.0%
AAACCAAATCCAGCAGGCTG+AGG + chr1.1:70201801-70201820 None:intergenic 50.0%
AGCAGATCTTGCCTGGAATG+CGG - chr1.1:70201826-70201845 MS.gene88866:intron 50.0%
CAGGAAAGGGTTAGGGCAAA+TGG - chr1.1:70200397-70200416 MS.gene88866:intron 50.0%
CATGGTCATAGCAAGGGTTC+TGG - chr1.1:70201024-70201043 MS.gene88866:CDS 50.0%
CATTTGCCCTAACCCTTTCC+TGG + chr1.1:70200399-70200418 None:intergenic 50.0%
CGAAATGGCATGGATCTAGC+AGG - chr1.1:70202092-70202111 MS.gene88866:intron 50.0%
CTTTACGTTGGCGATCTCGA+AGG - chr1.1:70198918-70198937 MS.gene88866:CDS 50.0%
GACAGACACCGGACATAACA+TGG - chr1.1:70199386-70199405 MS.gene88866:intron 50.0%
GACAGGGTCAAAATGGGCAA+CGG - chr1.1:70201892-70201911 MS.gene88866:intron 50.0%
GATGGTTCAGTCTCCGAATG+TGG - chr1.1:70198845-70198864 MS.gene88866:CDS 50.0%
GATTCTGCTGCACATGTTGG+AGG + chr1.1:70201941-70201960 None:intergenic 50.0%
GCCATATCAGCTCCAAAGAC+AGG - chr1.1:70201875-70201894 MS.gene88866:intron 50.0%
GCCCCTCAGCAGTTGTATTA+CGG - chr1.1:70201750-70201769 MS.gene88866:intron 50.0%
GGCCAACAATCGAAATGGCA+TGG - chr1.1:70202082-70202101 MS.gene88866:intron 50.0%
GGTAGCAGAAGCTAAAGCAG+AGG + chr1.1:70202201-70202220 None:intergenic 50.0%
GGTCAAAATGGGCAACGGAT+AGG - chr1.1:70201897-70201916 MS.gene88866:intron 50.0%
GGTGTAAGACAGTCCACAAG+GGG + chr1.1:70202677-70202696 None:intergenic 50.0%
GTTGAAAGCCAAGTTCGAGC+AGG - chr1.1:70200690-70200709 MS.gene88866:intron 50.0%
TATTACGGTCAAGGCACACC+TGG - chr1.1:70201765-70201784 MS.gene88866:intron 50.0%
TCAGCGCAAAGAAGAGAGGA+AGG - chr1.1:70201224-70201243 MS.gene88866:CDS 50.0%
TCTGTTTAGCCAAGTCGCTC+AGG - chr1.1:70198968-70198987 MS.gene88866:CDS 50.0%
TGCTGGAAACCAAATCCAGC+AGG + chr1.1:70201807-70201826 None:intergenic 50.0%
TGCTTCCTCGGGAGTAGAAA+AGG + chr1.1:70201058-70201077 None:intergenic 50.0%
TTTGCTCAAATCCGTTCCCC+TGG - chr1.1:70201669-70201688 MS.gene88866:intron 50.0%
! GCGAATGCGTCACTTTACGT+TGG - chr1.1:70198906-70198925 MS.gene88866:CDS 50.0%
!! AAAGGTCTCTGAGGCATTGC+AGG - chr1.1:70202790-70202809 MS.gene88866:CDS 50.0%
!! CATACCATGCGCTGATTGTC+TGG + chr1.1:70202224-70202243 None:intergenic 50.0%
!! CCCTGTCTTTGGAGCTGATA+TGG + chr1.1:70201879-70201898 None:intergenic 50.0%
!! GCCCATTTTGACCCTGTCTT+TGG + chr1.1:70201890-70201909 None:intergenic 50.0%
!! TACCATGCGCTGATTGTCTG+GGG + chr1.1:70202222-70202241 None:intergenic 50.0%
!! TAGCAAGGGTTCTGGTTTCG+TGG - chr1.1:70201032-70201051 MS.gene88866:CDS 50.0%
!!! TGGGTTTTTTGTTCGCCACC+AGG - chr1.1:70200378-70200397 MS.gene88866:intron 50.0%
AACTGCTGAGGGGCAAGTCT+TGG + chr1.1:70201744-70201763 None:intergenic 55.0%
AATCCGTTCCCCTGGTGGAA+TGG - chr1.1:70201677-70201696 MS.gene88866:intron 55.0%
ACTGCAGCAGCAGCTGAATC+TGG + chr1.1:70200586-70200605 None:intergenic 55.0%
AGAGAGGAAGGCTCAGTTGC+AGG - chr1.1:70201236-70201255 MS.gene88866:CDS 55.0%
CAGACTAGGCGATCCTCTCT+TGG - chr1.1:70199017-70199036 MS.gene88866:CDS 55.0%
CGGATAGGTGCTCGACGAAA+TGG - chr1.1:70201912-70201931 MS.gene88866:intron 55.0%
GAGGCAAGTGATGTAGACCC+TGG + chr1.1:70202182-70202201 None:intergenic 55.0%
GGCTGCGATTTCATCACCGA+TGG - chr1.1:70198827-70198846 MS.gene88866:CDS 55.0%
GGGTCTGTAGGGATCAGACT+AGG - chr1.1:70199003-70199022 MS.gene88866:CDS 55.0%
GGTTCAGTCTCCGAATGTGG+TGG - chr1.1:70198848-70198867 MS.gene88866:CDS 55.0%
TACCCCAGACAATCAGCGCA+TGG - chr1.1:70202217-70202236 MS.gene88866:intron 55.0%
TATTTGTGGGGAGGGCTCAG+AGG - chr1.1:70200647-70200666 MS.gene88866:CDS 55.0%
TCGCCACCAGGAAAGGGTTA+GGG - chr1.1:70200390-70200409 MS.gene88866:intron 55.0%
TGGCTCAGCGCAAAGAAGAG+AGG - chr1.1:70201220-70201239 MS.gene88866:CDS 55.0%
TTCATACCACCTCAGCCTGC+TGG - chr1.1:70201789-70201808 MS.gene88866:intron 55.0%
TTCCAGCAGCAGATCTTGCC+TGG - chr1.1:70201819-70201838 MS.gene88866:intron 55.0%
TTCCAGGCAAGATCTGCTGC+TGG + chr1.1:70201824-70201843 None:intergenic 55.0%
TTCGCCACCAGGAAAGGGTT+AGG - chr1.1:70200389-70200408 MS.gene88866:intron 55.0%
TTGCCCTAACCCTTTCCTGG+TGG + chr1.1:70200396-70200415 None:intergenic 55.0%
! CTCGAAGGGAGTGTGAACGA+AGG - chr1.1:70198933-70198952 MS.gene88866:CDS 55.0%
ATCTTGCCTGGAATGCGGCC+TGG - chr1.1:70201831-70201850 MS.gene88866:intron 60.0%
CCAAATCCAGCAGGCTGAGG+TGG + chr1.1:70201798-70201817 None:intergenic 60.0%
CCACCTCAGCCTGCTGGATT+TGG - chr1.1:70201795-70201814 MS.gene88866:intron 60.0%
CGCATTCGCGAACAGTCCTC+CGG + chr1.1:70198895-70198914 None:intergenic 60.0%
GCTCAAATCCGTTCCCCTGG+TGG - chr1.1:70201672-70201691 MS.gene88866:intron 60.0%
GCTTCCTGGGTACCATCCAG+GGG - chr1.1:70201716-70201735 MS.gene88866:intron 60.0%
GGCTGAGGTGGTATGAAGCC+AGG + chr1.1:70201786-70201805 None:intergenic 60.0%
GGCTTCCTGGGTACCATCCA+GGG - chr1.1:70201715-70201734 MS.gene88866:intron 60.0%
GTCTCCGAATGTGGTGGCTC+CGG - chr1.1:70198854-70198873 MS.gene88866:CDS 60.0%
! CGTGGCCTTTTCTACTCCCG+AGG - chr1.1:70201050-70201069 MS.gene88866:CDS 60.0%
! GTGCCATTCCACCAGGGGAA+CGG + chr1.1:70201683-70201702 None:intergenic 60.0%
!! CAAGTCTTGGTGCCCCTGGA+TGG + chr1.1:70201731-70201750 None:intergenic 60.0%
GAATGTGGTGGCTCCGGCGA+CGG - chr1.1:70198860-70198879 MS.gene88866:CDS 65.0%
GCAACACCAGGCCGCATTCC+AGG + chr1.1:70201840-70201859 None:intergenic 65.0%
GGGCTTCCTGGGTACCATCC+AGG - chr1.1:70201714-70201733 MS.gene88866:intron 65.0%
GTCGCCGGAGCCACCACATT+CGG + chr1.1:70198861-70198880 None:intergenic 65.0%
! GAATGGCACCGCTGGCTGCA+GGG - chr1.1:70201694-70201713 MS.gene88866:intron 65.0%
!! CAGCGGTGCCATTCCACCAG+GGG + chr1.1:70201688-70201707 None:intergenic 65.0%
!! CCAGCGGTGCCATTCCACCA+GGG + chr1.1:70201689-70201708 None:intergenic 65.0%
CCAGGAAGCCCTGCAGCCAG+CGG + chr1.1:70201705-70201724 None:intergenic 70.0%
CCCTGGTGGAATGGCACCGC+TGG - chr1.1:70201686-70201705 MS.gene88866:intron 70.0%
CCGGTCAATGCTGCCGTCGC+CGG + chr1.1:70198876-70198895 None:intergenic 70.0%
GGTGCCCCTGGATGGTACCC+AGG + chr1.1:70201723-70201742 None:intergenic 70.0%
! CGCTGGCTGCAGGGCTTCCT+GGG - chr1.1:70201703-70201722 MS.gene88866:intron 70.0%
! GGAATGGCACCGCTGGCTGC+AGG - chr1.1:70201693-70201712 MS.gene88866:intron 70.0%
!! CCGGCGACGGCAGCATTGAC+CGG - chr1.1:70198873-70198892 MS.gene88866:CDS 70.0%
!! GCCAGCGGTGCCATTCCACC+AGG + chr1.1:70201690-70201709 None:intergenic 70.0%
!! GCGACGGCAGCATTGACCGG+AGG - chr1.1:70198876-70198895 MS.gene88866:CDS 70.0%
!! GGGGCAAGTCTTGGTGCCCC+TGG + chr1.1:70201735-70201754 None:intergenic 70.0%
! CCGCTGGCTGCAGGGCTTCC+TGG - chr1.1:70201702-70201721 MS.gene88866:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 70198825 70202880 70198825 ID=MS.gene88866
chr1.1 mRNA 70198825 70202880 70198825 ID=MS.gene88866.t1;Parent=MS.gene88866
chr1.1 exon 70202631 70202880 70202631 ID=MS.gene88866.t1.exon1;Parent=MS.gene88866.t1
chr1.1 CDS 70202631 70202880 70202631 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70200868 70201646 70200868 ID=MS.gene88866.t1.exon2;Parent=MS.gene88866.t1
chr1.1 CDS 70200868 70201646 70200868 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70200619 70200696 70200619 ID=MS.gene88866.t1.exon3;Parent=MS.gene88866.t1
chr1.1 CDS 70200619 70200696 70200619 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70200448 70200537 70200448 ID=MS.gene88866.t1.exon4;Parent=MS.gene88866.t1
chr1.1 CDS 70200448 70200537 70200448 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70199743 70200042 70199743 ID=MS.gene88866.t1.exon5;Parent=MS.gene88866.t1
chr1.1 CDS 70199743 70200042 70199743 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70199467 70199661 70199467 ID=MS.gene88866.t1.exon6;Parent=MS.gene88866.t1
chr1.1 CDS 70199467 70199661 70199467 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
chr1.1 exon 70198825 70199052 70198825 ID=MS.gene88866.t1.exon7;Parent=MS.gene88866.t1
chr1.1 CDS 70198825 70199052 70198825 ID=cds.MS.gene88866.t1;Parent=MS.gene88866.t1
Gene Sequence

>MS.gene88866

ATGGCTGCGATTTCATCACCGATGGTTCAGTCTCCGAATGTGGTGGCTCCGGCGACGGCAGCATTGACCGGAGGACTGTTCGCGAATGCGTCACTTTACGTTGGCGATCTCGAAGGGAGTGTGAACGAAGGACAACTTTTTGATCTGTTTAGCCAAGTCGCTCAGGTTGTTTCAATTAGGGTCTGTAGGGATCAGACTAGGCGATCCTCTCTTGGTTACGCTTATGTCAACTTCACCAATGCTCAGGATGGTGAGTTTTTATTTTTCCAAATTAATTTGTTTGATCTTTTATTTGATACTGATATTTGTTAACTGTTTCTTGTTAATTTGGTTTTTGCATGTCGATTTCGTCGTAATTAATCATCTATGTGTTGTAATTTGGTTTTTGCATGTCGATTTCATCGTAATTAATCATCTACGTGTTGTTATCATCGTAATTATCATCAATTTCATTTATGAAGCATAAACACGACACAAATACTAATACATCCACACCGATAATTTGAGAAAGGAACATAAGTCATTGTGATCATGTGTCATGTTGGACACTAACATGTATCGGACAGACACCGGACATAACATGGACACAAATACATAACACCATAAAATTTTAAGAAAATGATATAAATCAATGTAATCACAAGTGTCAGTATCGGATACTACACATGTCAGACACCGGGACACGTCTTCAATAAGAAGTGTCGGTGCAATTGATAACATTGAACATGCCTTCGATGCTACAAAGATTCTTGTACATTGTACAAAGCTAAGTGTTGGGTAGTTGTTGATGTTTTGTTTTACCTATATAGAATGACTTATTAGATGTATTCCGAGATTCATTATTCATATCATAACTTATGTATGTTGAATGTGAAATCCAGATGAACAATTGTAAGGATGAAGGTTGATGTTGTCCTTGTTTATAGTTGTATCTATTAATTAATTATACCAACCCATTTTTATGTATTTATTTTAACGGCATATTAATGTTGGGGGTATTAGGTTGGTCATTGTATTAATTTGTATTATTTGACGGCTTTGTCACATTGAAGAAACCACAAAATCTGTGCACAAATTTCTTCTTCTGAACTGTGATGTACTGTTTATTCTCATTTTACATCCATAATAATTAATATATGGATGGACTGTTGTTATCATAGGTTTTGGTAGTTATTAAAAATATCTTATGGTTGATATGCATTGTTGATCCTATTTTTGTTTCTTGATTTTTCAGCGGCCAATGCAAAGGAACTTCTCAACTTCACTCCTCTGAATGGGAAACCTATTCGTATCATGTTTTCTCAACGTGATCCAAGTGTTCGGAAAAGTGGATCGGGCAATGTGTTCATTAAGAACCTGGACACATCAATTGATCACAAGGCGTTGCATGACACTTTTGCTGCGTTTGGCCCTGTACTTTCTTGTAAGGTGGCTCTTGACAGTAATGGTCAGTCAAAAGGGTATGGCTTTGTTCAGTTTGACAATGAAGAAGCTGCAAAGAGTGCCATCAAACAGTTGGATGGCATGTTGATAAATGATAAACAAGTCTATGTTGGGTTTTTTGTTCGCCACCAGGAAAGGGTTAGGGCAAATGGATCGCCCAAGTTCACTAATGTGTATGTGAAAAATCTTTCTGAAGCATCAACTGATGAGGACTTGAAACAACTTTTTGGCCCCTTTGGCAAGATAACTAGTGCAACAGTCATGAAAGATGCAAATGGGAAATCTAGATGCTTTGGTTTTGTGAATTTTCAAAGTCCAGATTCAGCTGCTGCTGCAGTTGAGAAGTTAAATGGAACTGCTATCAATGATGACAAGGTTTTATTTGTGGGGAGGGCTCAGAGGAAAGCAGAAAGAGAGCATGAGTTGAAAGCCAAGTTCGAGCAGGAAAGAATTAACAGATATGAGAAATTGCAAGGGGCTAATTTGTACCTGAAAAATCTTGATGACGATTTTAATGAAGAAAAGTTGAAAGATCTATTTTCTGAGTTTGGAACTGTAACATCTTGCAGGGTATGTTAAAGATTATTTTTATTGACCGTCTCTCTGCATATATTTATTTGTTTGTGAACATGCGCAACTATGTCCTTTTTTGTGTGCATTATATACTTCCAACATACCTTTTTTACTGGTCAATTTTATTGATATTATTTTAATCAATGAAATTATATGTTGCATTATTAGGTGATGTTGGATTCACATGGTCATAGCAAGGGTTCTGGTTTCGTGGCCTTTTCTACTCCCGAGGAAGCAAATAAAGCGGTAAGTATTCAAAGAAGCGTGGCTGAGCTACATGTTTATTTTCATAATCGATTCTTAAGCTTTCTATTGTTGTTTGTCCAGTTGAATGAAATGAATGGAAAGTTGGTGGGAAGAAAGCCTTTGTTTGTTGCTGTGGCTCAGCGCAAAGAAGAGAGGAAGGCTCAGTTGCAGGTGATGCTCTTCTTTAACATCATTATGCACATATGATTTCAATACTTACTTCATTATTAAGTAGCTGACTGGCTATAGCTTATAATTAGTGGATTTGCTTTGACTGCCTTTGTTGAAATATTCATTTTTGCTTTGTAATATATAACACTTCTTCATTTTTGCTTTGTTGAAATATTCATTTTTGCTTATAATTGGTATGTTGTATGACTTGTATCTAGTTTTTTTAAATGCTCATCTTTTTTGTGTACAATTTATTTGAGTTCTGCTATTTGACATTCCTTTATGAATCCTCATGGTTGATAAAACTTAGACATAACCCGTTTCCCTTTAAACATTTATTTACTTTCACAGTTCTCATGGTCGGTTGACTGTGTTTTGGAGTTTAACAAGTTATTTTCTCTGTAGGCACATTTTGCTCAAATCCGTTCCCCTGGTGGAATGGCACCGCTGGCTGCAGGGCTTCCTGGGTACCATCCAGGGGCACCAAGACTTGCCCCTCAGCAGTTGTATTACGGTCAAGGCACACCTGGCTTCATACCACCTCAGCCTGCTGGATTTGGTTTCCAGCAGCAGATCTTGCCTGGAATGCGGCCTGGTGTTGCTCCGAATTTTGTTATGCCATATCAGCTCCAAAGACAGGGTCAAAATGGGCAACGGATAGGTGCTCGACGAAATGGAAACCTCCAACATGTGCAGCAGAATCAAGTAATTATTACTTAAATTTAAATTTTGAGCTTTTTATAATGACTTGTTTTATCGCATTAAAAACATATATATTGAAAGCAGATGTTGCATCGTAACTCCAACCAAGGGTATAGATATATGGCCAACAATCGAAATGGCATGGATCTAGCAGGTCCAATGTTGCCGATGACATTTGATGGTTCTGGAGTTTCTGCTGCTCCTATTGATAATCAGCGTCCAGGGTCTACATCACTTGCCTCTGCTTTAGCTTCTGCTACCCCAGACAATCAGCGCATGGTATGTATAAGTTGCATTTGGTATTTTTACATGTAGGAACTGTAGATTGTTTCCTTAGAGTAAATTGGTATTCTGATCTCTGAAAATTTACTTGCCTCACAATTTTAATCCTTTAATTAAATTATTCAAACACTTCATGTTACTCCTTTTGCCATTTATGGTAGGGTCTAGCATAATATTTGTTTAGTAATTTAAATGATAAAATCATATGCATAATTTAAACACGGATCAAATTGAGGTACATTACTAACTAAGGACTAAAATTACATTATACTTGTTTTCTATTTTTTCTTGGAAGCTATATCAATAACATATGTAGATAATTTAATTTGTAGTTACCTTTGTATCAGTTAATTTATAAAACTCATGTGTGAGAAATGTAATTTTTCGGTATGTACCAATTGAAATTATCAGATGCTCGGTGAACATCTATATCCCCTTGTGGACTGTCTTACACCAAACCAACATACTGCAAAGGTGACAGGGATGTTGCTTGAAATGGACCAATCCGAAGTGATTCATCTTATTGAATCTCCCGATGCCCTAAAAATAAAGGTCTCTGAGGCATTGCAGGTCCTTCATGAAGCTGCATCGGGATCTGAAGTTGGTGATCAGCTTGGTTCATTGTCATTGAACGAATGA
Protein sequence

>MS.gene88866.t1

MAAISSPMVQSPNVVAPATAALTGGLFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFTNAQDAANAKELLNFTPLNGKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAFGPVLSCKVALDSNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQVYVGFFVRHQERVRANGSPKFTNVYVKNLSEASTDEDLKQLFGPFGKITSATVMKDANGKSRCFGFVNFQSPDSAAAAVEKLNGTAINDDKVLFVGRAQRKAEREHELKAKFEQERINRYEKLQGANLYLKNLDDDFNEEKLKDLFSEFGTVTSCRVMLDSHGHSKGSGFVAFSTPEEANKALNEMNGKLVGRKPLFVAVAQRKEERKAQLQAHFAQIRSPGGMAPLAAGLPGYHPGAPRLAPQQLYYGQGTPGFIPPQPAGFGFQQQILPGMRPGVAPNFVMPYQLQRQGQNGQRIGARRNGNLQHVQQNQMLHRNSNQGYRYMANNRNGMDLAGPMLPMTFDGSGVSAAPIDNQRPGSTSLASALASATPDNQRMMLGEHLYPLVDCLTPNQHTAKVTGMLLEMDQSEVIHLIESPDALKIKVSEALQVLHEAASGSEVGDQLGSLSLNE