Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07080.t1 | XP_003625997.2 | 98.5 | 603 | 9 | 0 | 1 | 603 | 60 | 662 | 0.00E+00 | 1229.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07080.t1 | O22898 | 68.5 | 600 | 189 | 0 | 1 | 600 | 60 | 659 | 4.2e-256 | 885.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07080.t1 | G7KTN5 | 98.5 | 603 | 9 | 0 | 1 | 603 | 60 | 662 | 0.0e+00 | 1229.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050418 | MS.gene07080 | 0.950647 | 1.07E-108 | -1.69E-46 |
| MS.gene050419 | MS.gene07080 | 0.980872 | 3.11E-151 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07080.t1 | MTR_7g109830 | 98.507 | 603 | 9 | 0 | 1 | 603 | 60 | 662 | 0.0 | 1239 |
| MS.gene07080.t1 | MTR_1g086600 | 77.686 | 605 | 131 | 2 | 1 | 602 | 82 | 685 | 0.0 | 991 |
| MS.gene07080.t1 | MTR_5g009350 | 52.492 | 602 | 284 | 1 | 1 | 602 | 62 | 661 | 0.0 | 642 |
| MS.gene07080.t1 | MTR_8g099420 | 51.846 | 596 | 287 | 0 | 1 | 596 | 63 | 658 | 0.0 | 642 |
| MS.gene07080.t1 | MTR_5g009350 | 53.072 | 586 | 275 | 0 | 1 | 586 | 62 | 647 | 0.0 | 637 |
| MS.gene07080.t1 | MTR_5g009360 | 52.000 | 600 | 286 | 1 | 1 | 600 | 62 | 659 | 0.0 | 632 |
| MS.gene07080.t1 | MTR_1g034360 | 48.997 | 598 | 304 | 1 | 1 | 598 | 62 | 658 | 0.0 | 602 |
| MS.gene07080.t1 | MTR_4g068670 | 48.247 | 599 | 306 | 3 | 1 | 598 | 61 | 656 | 0.0 | 597 |
| MS.gene07080.t1 | MTR_5g009360 | 51.048 | 525 | 255 | 1 | 76 | 600 | 11 | 533 | 0.0 | 535 |
| MS.gene07080.t1 | MTR_5g009350 | 50.775 | 516 | 252 | 1 | 1 | 514 | 62 | 577 | 0.0 | 531 |
| MS.gene07080.t1 | MTR_5g009350 | 52.893 | 484 | 228 | 0 | 1 | 484 | 62 | 545 | 0.0 | 527 |
| MS.gene07080.t1 | MTR_1g104810 | 39.866 | 597 | 344 | 8 | 2 | 594 | 33 | 618 | 8.46e-132 | 400 |
| MS.gene07080.t1 | MTR_1g104810 | 39.933 | 596 | 343 | 8 | 2 | 593 | 100 | 684 | 6.31e-131 | 400 |
| MS.gene07080.t1 | MTR_1g030290 | 33.226 | 620 | 367 | 13 | 3 | 593 | 93 | 694 | 2.73e-98 | 315 |
| MS.gene07080.t1 | MTR_3g087980 | 33.010 | 618 | 371 | 12 | 5 | 595 | 93 | 694 | 3.39e-97 | 312 |
| MS.gene07080.t1 | MTR_3g082660 | 31.588 | 611 | 388 | 11 | 5 | 593 | 124 | 726 | 3.22e-89 | 291 |
| MS.gene07080.t1 | MTR_3g084450 | 27.201 | 636 | 380 | 19 | 19 | 594 | 108 | 720 | 4.07e-52 | 191 |
| MS.gene07080.t1 | MTR_8g083170 | 26.332 | 638 | 385 | 19 | 19 | 594 | 110 | 724 | 5.56e-50 | 185 |
| MS.gene07080.t1 | MTR_3g084470 | 26.772 | 635 | 381 | 18 | 19 | 594 | 106 | 715 | 2.39e-49 | 183 |
| MS.gene07080.t1 | MTR_3g084450 | 30.189 | 477 | 271 | 15 | 162 | 594 | 54 | 512 | 3.36e-45 | 168 |
| MS.gene07080.t1 | MTR_1g063110 | 26.650 | 394 | 231 | 13 | 129 | 510 | 155 | 502 | 3.66e-24 | 107 |
| MS.gene07080.t1 | MTR_5g007640 | 27.178 | 482 | 274 | 18 | 19 | 488 | 98 | 514 | 4.47e-24 | 107 |
| MS.gene07080.t1 | MTR_5g008820 | 22.718 | 493 | 295 | 14 | 19 | 490 | 41 | 468 | 2.95e-22 | 101 |
| MS.gene07080.t1 | MTR_8g074120 | 25.893 | 448 | 252 | 18 | 64 | 487 | 40 | 431 | 1.76e-21 | 98.6 |
| MS.gene07080.t1 | MTR_8g074040 | 22.951 | 488 | 290 | 14 | 19 | 483 | 83 | 507 | 3.77e-21 | 98.2 |
| MS.gene07080.t1 | MTR_4g128337 | 26.946 | 501 | 272 | 20 | 7 | 488 | 50 | 475 | 8.98e-21 | 96.7 |
| MS.gene07080.t1 | MTR_1569s0010 | 24.427 | 524 | 303 | 19 | 19 | 508 | 23 | 487 | 1.07e-20 | 96.3 |
| MS.gene07080.t1 | MTR_4g057730 | 27.844 | 334 | 181 | 14 | 162 | 488 | 189 | 469 | 1.38e-20 | 95.5 |
| MS.gene07080.t1 | MTR_4g057730 | 27.844 | 334 | 181 | 14 | 162 | 488 | 189 | 469 | 2.39e-20 | 95.1 |
| MS.gene07080.t1 | MTR_2g095510 | 28.267 | 329 | 178 | 14 | 140 | 461 | 163 | 440 | 2.85e-20 | 94.4 |
| MS.gene07080.t1 | MTR_2g095510 | 28.090 | 356 | 197 | 15 | 140 | 488 | 163 | 466 | 3.47e-20 | 94.7 |
| MS.gene07080.t1 | MTR_5g008800 | 23.625 | 491 | 295 | 13 | 19 | 490 | 41 | 470 | 7.06e-20 | 94.0 |
| MS.gene07080.t1 | MTR_4g077900 | 26.022 | 465 | 278 | 16 | 30 | 488 | 1 | 405 | 1.37e-19 | 92.4 |
| MS.gene07080.t1 | MTR_1g063120 | 24.221 | 578 | 345 | 21 | 7 | 570 | 47 | 545 | 1.43e-19 | 92.8 |
| MS.gene07080.t1 | MTR_4g057730 | 28.013 | 307 | 162 | 13 | 162 | 461 | 189 | 443 | 1.91e-19 | 92.0 |
| MS.gene07080.t1 | MTR_4g121600 | 24.096 | 498 | 278 | 16 | 19 | 483 | 47 | 477 | 1.95e-19 | 92.4 |
| MS.gene07080.t1 | MTR_3g460770 | 26.190 | 504 | 268 | 23 | 7 | 488 | 47 | 468 | 4.37e-19 | 91.3 |
| MS.gene07080.t1 | MTR_4g011790 | 24.854 | 515 | 315 | 18 | 19 | 510 | 89 | 554 | 4.47e-19 | 91.7 |
| MS.gene07080.t1 | MTR_8g074040 | 23.928 | 443 | 250 | 15 | 64 | 483 | 11 | 389 | 1.25e-18 | 89.7 |
| MS.gene07080.t1 | MTR_1g090737 | 28.818 | 347 | 172 | 15 | 157 | 488 | 207 | 493 | 2.07e-18 | 89.4 |
| MS.gene07080.t1 | MTR_4g013210 | 23.669 | 507 | 323 | 18 | 19 | 510 | 83 | 540 | 3.96e-17 | 85.1 |
| MS.gene07080.t1 | MTR_2g044180 | 23.566 | 488 | 296 | 15 | 19 | 484 | 47 | 479 | 4.99e-17 | 85.1 |
| MS.gene07080.t1 | MTR_5g027500 | 24.444 | 495 | 305 | 13 | 27 | 510 | 78 | 514 | 3.04e-16 | 82.4 |
| MS.gene07080.t1 | MTR_5g027480 | 27.434 | 339 | 190 | 12 | 159 | 490 | 195 | 484 | 3.27e-16 | 82.4 |
| MS.gene07080.t1 | MTR_2g105570 | 35.503 | 169 | 100 | 7 | 326 | 488 | 310 | 475 | 4.07e-16 | 82.0 |
| MS.gene07080.t1 | MTR_1g026310 | 35.366 | 164 | 98 | 6 | 329 | 488 | 328 | 487 | 8.04e-16 | 81.3 |
| MS.gene07080.t1 | MTR_4g013210 | 26.257 | 358 | 220 | 14 | 160 | 510 | 68 | 388 | 1.13e-15 | 80.1 |
| MS.gene07080.t1 | MTR_8g039720 | 25.826 | 333 | 191 | 13 | 162 | 488 | 208 | 490 | 7.83e-15 | 78.2 |
| MS.gene07080.t1 | MTR_2g044180 | 23.898 | 431 | 251 | 15 | 76 | 484 | 13 | 388 | 1.20e-14 | 77.0 |
| MS.gene07080.t1 | MTR_4g005750 | 37.870 | 169 | 96 | 6 | 326 | 488 | 303 | 468 | 1.65e-14 | 77.0 |
| MS.gene07080.t1 | MTR_4g013210 | 22.574 | 505 | 290 | 16 | 19 | 510 | 83 | 499 | 5.21e-14 | 75.5 |
| MS.gene07080.t1 | MTR_3g064420 | 30.374 | 214 | 135 | 6 | 281 | 483 | 259 | 469 | 5.51e-14 | 75.5 |
| MS.gene07080.t1 | MTR_1g073180 | 33.333 | 165 | 105 | 5 | 326 | 488 | 322 | 483 | 1.14e-13 | 74.3 |
| MS.gene07080.t1 | MTR_1g073180 | 33.333 | 165 | 105 | 5 | 326 | 488 | 300 | 461 | 1.32e-13 | 73.9 |
| MS.gene07080.t1 | MTR_3g035130 | 22.353 | 510 | 299 | 18 | 8 | 506 | 26 | 449 | 1.75e-13 | 73.6 |
| MS.gene07080.t1 | MTR_3g035130 | 22.353 | 510 | 299 | 18 | 8 | 506 | 26 | 449 | 1.75e-13 | 73.6 |
| MS.gene07080.t1 | MTR_5g023730 | 28.061 | 196 | 129 | 4 | 304 | 490 | 280 | 472 | 3.45e-13 | 72.8 |
| MS.gene07080.t1 | MTR_4g013210 | 24.462 | 372 | 200 | 12 | 160 | 526 | 68 | 363 | 1.31e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07080.t1 | AT2G47240 | 68.500 | 600 | 189 | 0 | 1 | 600 | 1 | 600 | 0.0 | 890 |
| MS.gene07080.t1 | AT2G47240 | 68.500 | 600 | 189 | 0 | 1 | 600 | 60 | 659 | 0.0 | 890 |
| MS.gene07080.t1 | AT2G47240 | 68.500 | 600 | 189 | 0 | 1 | 600 | 60 | 659 | 0.0 | 890 |
| MS.gene07080.t1 | AT2G47240 | 68.500 | 600 | 189 | 0 | 1 | 600 | 60 | 659 | 0.0 | 890 |
| MS.gene07080.t1 | AT4G23850 | 51.347 | 594 | 289 | 0 | 1 | 594 | 63 | 656 | 0.0 | 654 |
| MS.gene07080.t1 | AT4G11030 | 51.174 | 596 | 291 | 0 | 1 | 596 | 63 | 658 | 0.0 | 634 |
| MS.gene07080.t1 | AT1G64400 | 50.336 | 596 | 296 | 0 | 1 | 596 | 63 | 658 | 0.0 | 632 |
| MS.gene07080.t1 | AT1G49430 | 46.990 | 598 | 315 | 2 | 1 | 596 | 63 | 660 | 0.0 | 572 |
| MS.gene07080.t1 | AT1G49430 | 45.575 | 452 | 245 | 1 | 1 | 451 | 63 | 514 | 1.37e-138 | 414 |
| MS.gene07080.t1 | AT5G27600 | 40.168 | 595 | 343 | 7 | 2 | 593 | 103 | 687 | 4.58e-137 | 416 |
| MS.gene07080.t1 | AT3G05970 | 41.709 | 597 | 333 | 8 | 2 | 594 | 103 | 688 | 1.38e-136 | 414 |
| MS.gene07080.t1 | AT1G77590 | 31.311 | 610 | 371 | 13 | 12 | 593 | 101 | 690 | 3.96e-94 | 304 |
| MS.gene07080.t1 | AT2G04350 | 31.537 | 631 | 384 | 13 | 1 | 593 | 99 | 719 | 1.57e-92 | 300 |
| MS.gene07080.t1 | AT2G04350 | 31.537 | 631 | 384 | 13 | 1 | 593 | 99 | 719 | 1.57e-92 | 300 |
| MS.gene07080.t1 | AT1G77590 | 32.206 | 562 | 333 | 13 | 60 | 593 | 3 | 544 | 1.98e-87 | 282 |
| MS.gene07080.t1 | AT3G23790 | 27.172 | 633 | 382 | 18 | 19 | 594 | 112 | 722 | 2.41e-49 | 183 |
| MS.gene07080.t1 | AT4G14070 | 26.825 | 630 | 375 | 18 | 19 | 593 | 128 | 726 | 3.70e-48 | 179 |
| MS.gene07080.t1 | AT1G66120 | 24.951 | 513 | 283 | 14 | 19 | 503 | 41 | 479 | 1.34e-25 | 111 |
| MS.gene07080.t1 | AT3G16910 | 25.088 | 570 | 325 | 20 | 19 | 562 | 49 | 542 | 1.33e-24 | 108 |
| MS.gene07080.t1 | AT1G65890 | 24.561 | 513 | 285 | 15 | 19 | 503 | 41 | 479 | 8.83e-24 | 106 |
| MS.gene07080.t1 | AT1G21530 | 24.449 | 499 | 290 | 16 | 19 | 494 | 42 | 476 | 6.60e-23 | 103 |
| MS.gene07080.t1 | AT1G65880 | 24.846 | 487 | 271 | 14 | 19 | 476 | 41 | 461 | 1.65e-22 | 102 |
| MS.gene07080.t1 | AT4G19010 | 28.000 | 425 | 230 | 17 | 109 | 508 | 139 | 512 | 1.74e-22 | 102 |
| MS.gene07080.t1 | AT1G20560 | 25.051 | 487 | 293 | 15 | 19 | 488 | 43 | 474 | 2.28e-22 | 101 |
| MS.gene07080.t1 | AT1G21530 | 24.850 | 499 | 286 | 17 | 19 | 494 | 42 | 474 | 8.98e-22 | 99.8 |
| MS.gene07080.t1 | AT1G21540 | 24.699 | 498 | 293 | 17 | 19 | 494 | 42 | 479 | 6.46e-21 | 97.1 |
| MS.gene07080.t1 | AT1G77240 | 23.752 | 501 | 293 | 16 | 19 | 494 | 41 | 477 | 9.20e-21 | 96.7 |
| MS.gene07080.t1 | AT5G16340 | 25.152 | 493 | 296 | 17 | 12 | 488 | 35 | 470 | 8.19e-20 | 93.6 |
| MS.gene07080.t1 | AT1G65060 | 25.000 | 464 | 252 | 17 | 19 | 461 | 77 | 465 | 9.39e-20 | 93.2 |
| MS.gene07080.t1 | AT1G65060 | 25.000 | 464 | 252 | 17 | 19 | 461 | 77 | 465 | 1.15e-19 | 93.2 |
| MS.gene07080.t1 | AT3G21230 | 30.588 | 340 | 179 | 17 | 155 | 488 | 207 | 495 | 2.43e-19 | 92.4 |
| MS.gene07080.t1 | AT3G21230 | 30.588 | 340 | 179 | 17 | 155 | 488 | 207 | 495 | 3.05e-19 | 92.0 |
| MS.gene07080.t1 | AT3G21230 | 27.237 | 503 | 273 | 24 | 7 | 488 | 65 | 495 | 3.56e-19 | 91.3 |
| MS.gene07080.t1 | AT4G05160 | 28.611 | 360 | 194 | 15 | 162 | 510 | 191 | 498 | 3.49e-18 | 88.6 |
| MS.gene07080.t1 | AT1G20560 | 24.943 | 441 | 260 | 14 | 64 | 488 | 11 | 396 | 4.35e-18 | 87.8 |
| MS.gene07080.t1 | AT1G75960 | 24.248 | 499 | 293 | 18 | 12 | 488 | 35 | 470 | 1.02e-16 | 84.0 |
| MS.gene07080.t1 | AT1G20480 | 27.273 | 330 | 186 | 12 | 162 | 488 | 214 | 492 | 5.74e-16 | 81.6 |
| MS.gene07080.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 326 | 490 | 316 | 483 | 1.60e-15 | 80.1 |
| MS.gene07080.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 326 | 490 | 316 | 483 | 1.79e-15 | 79.7 |
| MS.gene07080.t1 | AT3G21240 | 35.465 | 172 | 100 | 8 | 326 | 490 | 316 | 483 | 1.79e-15 | 79.7 |
| MS.gene07080.t1 | AT5G16370 | 34.682 | 173 | 96 | 7 | 329 | 488 | 302 | 470 | 7.94e-15 | 78.2 |
| MS.gene07080.t1 | AT1G20510 | 34.969 | 163 | 100 | 6 | 329 | 488 | 312 | 471 | 4.44e-14 | 75.5 |
| MS.gene07080.t1 | AT1G20510 | 34.969 | 163 | 100 | 6 | 329 | 488 | 312 | 471 | 4.97e-14 | 75.1 |
| MS.gene07080.t1 | AT1G68270 | 34.270 | 178 | 90 | 7 | 329 | 488 | 275 | 443 | 1.73e-13 | 73.9 |
| MS.gene07080.t1 | AT1G20510 | 36.765 | 136 | 81 | 5 | 329 | 461 | 312 | 445 | 2.50e-13 | 73.2 |
| MS.gene07080.t1 | AT1G51680 | 33.333 | 219 | 134 | 8 | 326 | 535 | 323 | 538 | 2.94e-13 | 73.2 |
| MS.gene07080.t1 | AT1G62940 | 26.450 | 431 | 245 | 16 | 111 | 520 | 123 | 502 | 5.18e-13 | 72.4 |
| MS.gene07080.t1 | AT1G51680 | 36.257 | 171 | 100 | 7 | 326 | 490 | 323 | 490 | 2.01e-12 | 70.5 |
| MS.gene07080.t1 | AT1G51680 | 36.686 | 169 | 98 | 7 | 326 | 488 | 323 | 488 | 3.33e-12 | 69.7 |
| MS.gene07080.t1 | AT2G17650 | 32.353 | 170 | 80 | 6 | 329 | 476 | 360 | 516 | 2.50e-11 | 67.0 |
| MS.gene07080.t1 | AT3G48990 | 30.319 | 188 | 123 | 4 | 325 | 508 | 281 | 464 | 3.08e-11 | 66.6 |
| MS.gene07080.t1 | AT2G47245 | 72.222 | 36 | 10 | 0 | 1 | 36 | 93 | 128 | 7.52e-11 | 60.5 |
Find 0 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAAAATTATTCATATTT+AGG | - | 51330:9934-9953 | MS.gene07080:intron | 10.0% |
| !!! | CTTTTTTATTTTTGTTAAAA+GGG | - | 51330:6265-6284 | MS.gene07080:CDS | 10.0% |
| !!! | TCTTTTTTATTTTTGTTAAA+AGG | - | 51330:6264-6283 | MS.gene07080:CDS | 10.0% |
| !! | AAGACAATAATAAATATATC+TGG | + | 51330:7924-7943 | None:intergenic | 15.0% |
| !! | ATTGTGTAATTTCAATTATA+GGG | - | 51330:6304-6323 | MS.gene07080:intron | 15.0% |
| !! | CTTCAAAATAAAGATATATT+TGG | - | 51330:9154-9173 | MS.gene07080:intron | 15.0% |
| !! | TATTGTGTAATTTCAATTAT+AGG | - | 51330:6303-6322 | MS.gene07080:intron | 15.0% |
| !!! | AAAACATTACTTATTTTGTT+AGG | - | 51330:7789-7808 | MS.gene07080:intron | 15.0% |
| !!! | AAACATTACTTATTTTGTTA+GGG | - | 51330:7790-7809 | MS.gene07080:intron | 15.0% |
| !!! | TAAAACAAATAAATTTTGTG+CGG | + | 51330:8371-8390 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTTAGCAAATTT+TGG | - | 51330:8528-8547 | MS.gene07080:intron | 15.0% |
| !! | AAAATTCAGTATTGTTCATA+CGG | - | 51330:9818-9837 | MS.gene07080:intron | 20.0% |
| !! | AAAGTAAACAAACTATATTG+AGG | + | 51330:8208-8227 | None:intergenic | 20.0% |
| !! | AAGTAAACAAACTATATTGA+GGG | + | 51330:8207-8226 | None:intergenic | 20.0% |
| !! | AATTCATATACCACATTTAA+AGG | - | 51330:7277-7296 | MS.gene07080:CDS | 20.0% |
| !! | AGTTTACTGCATAAAAATAT+AGG | + | 51330:8627-8646 | None:intergenic | 20.0% |
| !! | ATAACACATATTTCTTGAAT+TGG | + | 51330:10129-10148 | None:intergenic | 20.0% |
| !! | ATGTAGTTAAAAGAATATCA+TGG | + | 51330:7051-7070 | None:intergenic | 20.0% |
| !! | ATTGTTGATATATTTCAAAC+AGG | - | 51330:10711-10730 | MS.gene07080:intron | 20.0% |
| !! | GACATGAACATAAAATAAAA+TGG | + | 51330:6062-6081 | None:intergenic | 20.0% |
| !! | GTTCTACATTAAAAAAAGTA+AGG | + | 51330:7016-7035 | None:intergenic | 20.0% |
| !! | TAACACAAGAAAAATACAAT+TGG | + | 51330:10223-10242 | None:intergenic | 20.0% |
| !! | TCTATTATTACAATACATCA+TGG | - | 51330:8958-8977 | MS.gene07080:CDS | 20.0% |
| !!! | AACATTACTTATTTTGTTAG+GGG | - | 51330:7791-7810 | MS.gene07080:intron | 20.0% |
| !!! | ATATTTTTATGCAGTAAACT+TGG | - | 51330:8627-8646 | MS.gene07080:intron | 20.0% |
| !!! | CAGAAATATTTTCATTCATT+TGG | - | 51330:8144-8163 | MS.gene07080:intron | 20.0% |
| !!! | CATTTAAGATTATATCTTTC+AGG | - | 51330:8411-8430 | MS.gene07080:intron | 20.0% |
| !!! | GTTTTATCTTATAAGAATTG+TGG | + | 51330:9074-9093 | None:intergenic | 20.0% |
| !!! | GTTTTTCTTTTATTTAGTGA+CGG | + | 51330:6844-6863 | None:intergenic | 20.0% |
| !!! | TATTGTTGTGTTTTTGTATA+AGG | - | 51330:9976-9995 | MS.gene07080:intron | 20.0% |
| !!! | TTAACTTTATTTTCTTTGTG+TGG | - | 51330:7457-7476 | MS.gene07080:intron | 20.0% |
| !!! | TTTTAGATGACATAAGTAAT+TGG | + | 51330:6808-6827 | None:intergenic | 20.0% |
| ! | AATGGTTAGTGCATAATATA+AGG | - | 51330:7577-7596 | MS.gene07080:intron | 25.0% |
| ! | AATTTGATTGTGACATTGTT+TGG | - | 51330:9638-9657 | MS.gene07080:intron | 25.0% |
| ! | ACACTATATATGGTTAATCT+AGG | - | 51330:9307-9326 | MS.gene07080:intron | 25.0% |
| ! | ACATAAGTAATTGGAGAAAT+TGG | + | 51330:6799-6818 | None:intergenic | 25.0% |
| ! | ACCAAAATCCATATAATTGT+CGG | + | 51330:8580-8599 | None:intergenic | 25.0% |
| ! | ACGTTCAATATAAAAACATG+AGG | + | 51330:6931-6950 | None:intergenic | 25.0% |
| ! | AGATAAATACACATCTTCAA+CGG | + | 51330:8027-8046 | None:intergenic | 25.0% |
| ! | ATAATCTTAACAACACCATT+AGG | + | 51330:9693-9712 | None:intergenic | 25.0% |
| ! | ATATGTAGTAGTACATAAAG+AGG | + | 51330:10676-10695 | None:intergenic | 25.0% |
| ! | ATCTTCAAAACAAAAGTTTG+AGG | + | 51330:9603-9622 | None:intergenic | 25.0% |
| ! | ATTCAAATACGCTCTTAATT+AGG | - | 51330:10446-10465 | MS.gene07080:CDS | 25.0% |
| ! | CAATAGAGTAAAAACATAGA+AGG | + | 51330:6427-6446 | None:intergenic | 25.0% |
| ! | CAATTTAAACATCAAATGCA+GGG | - | 51330:7136-7155 | MS.gene07080:intron | 25.0% |
| ! | CATCATTCTCTATAATATCA+AGG | - | 51330:9023-9042 | MS.gene07080:CDS | 25.0% |
| ! | GAGATAAGCATAAAATTTGA+GGG | - | 51330:10767-10786 | MS.gene07080:CDS | 25.0% |
| ! | GAGTATTTGGAAAATGTTTA+TGG | - | 51330:9765-9784 | MS.gene07080:intron | 25.0% |
| ! | GGACTTGAAAAAGTTTATAA+AGG | + | 51330:6995-7014 | None:intergenic | 25.0% |
| ! | GTATTATTATGTTACACAAC+TGG | + | 51330:7315-7334 | None:intergenic | 25.0% |
| ! | TAGGTAAAAGAAGTTAATAG+TGG | + | 51330:8754-8773 | None:intergenic | 25.0% |
| ! | TATGATAAAATTTACAGCAC+CGG | + | 51330:7163-7182 | None:intergenic | 25.0% |
| ! | TCAATTTAAACATCAAATGC+AGG | - | 51330:7135-7154 | MS.gene07080:intron | 25.0% |
| ! | TCCATAAATGAGTGAAAATA+CGG | - | 51330:6716-6735 | MS.gene07080:CDS | 25.0% |
| ! | TCTGTATTTACCTTTAAATG+TGG | + | 51330:7290-7309 | None:intergenic | 25.0% |
| ! | TGATCTATTAGCATTTAGAA+AGG | - | 51330:8695-8714 | MS.gene07080:CDS | 25.0% |
| !! | ATTTGGATTTTCTTGACAAA+AGG | - | 51330:8161-8180 | MS.gene07080:intron | 25.0% |
| !! | CTATTAACTTCTTTTACCTA+TGG | - | 51330:8754-8773 | MS.gene07080:CDS | 25.0% |
| !! | GCATTTTTCCACAATATATA+GGG | + | 51330:9874-9893 | None:intergenic | 25.0% |
| !! | GTGTTGTTAAGATTATTGAT+AGG | - | 51330:9697-9716 | MS.gene07080:intron | 25.0% |
| !! | TGAAGTACTTACACTATATA+TGG | - | 51330:9297-9316 | MS.gene07080:intron | 25.0% |
| !! | TGCATTTTTCCACAATATAT+AGG | + | 51330:9875-9894 | None:intergenic | 25.0% |
| !! | TTGAGATTGGTGAAATTTTA+GGG | + | 51330:8789-8808 | None:intergenic | 25.0% |
| !! | TTTGGATTTTCTTGACAAAA+GGG | - | 51330:8162-8181 | MS.gene07080:intron | 25.0% |
| !! | TTTTCACTCATTTATGGAAT+TGG | + | 51330:6714-6733 | None:intergenic | 25.0% |
| !!! | AAAATCGACTGATTTGATAA+TGG | - | 51330:6683-6702 | MS.gene07080:CDS | 25.0% |
| !!! | CTTGCATAACTTTTTTATCT+TGG | + | 51330:7215-7234 | None:intergenic | 25.0% |
| !!! | GAGGAATATTTTTTCCATAA+GGG | - | 51330:8083-8102 | MS.gene07080:CDS | 25.0% |
| !!! | TGAGGAATATTTTTTCCATA+AGG | - | 51330:8082-8101 | MS.gene07080:CDS | 25.0% |
| !!! | TGTGTTTTTGTATAAGGTTT+GGG | - | 51330:9982-10001 | MS.gene07080:intron | 25.0% |
| !!! | TTGTGTTTTTGTATAAGGTT+TGG | - | 51330:9981-10000 | MS.gene07080:intron | 25.0% |
| !!! | TTTGAGATTGGTGAAATTTT+AGG | + | 51330:8790-8809 | None:intergenic | 25.0% |
| AAGTCTCTTTCCATATCAAA+TGG | + | 51330:10554-10573 | None:intergenic | 30.0% | |
| AATCTCATAAAACTTTCCCA+AGG | - | 51330:9726-9745 | MS.gene07080:intron | 30.0% | |
| AGAGTAAAAACATAGAAGGA+AGG | + | 51330:6423-6442 | None:intergenic | 30.0% | |
| ATAAAAATATAGGTGTGCAG+TGG | + | 51330:8617-8636 | None:intergenic | 30.0% | |
| ATAGGAGAAATTCAACCTAA+TGG | - | 51330:9675-9694 | MS.gene07080:intron | 30.0% | |
| ATGAAGAAATCACCAAGAAA+TGG | - | 51330:10053-10072 | MS.gene07080:intron | 30.0% | |
| ATGCTTACATCTTCTACTAT+TGG | + | 51330:9798-9817 | None:intergenic | 30.0% | |
| ATTTCGTTGTATACAGATAC+AGG | + | 51330:9403-9422 | None:intergenic | 30.0% | |
| ATTTGATATGGAAAGAGACT+TGG | - | 51330:10553-10572 | MS.gene07080:intron | 30.0% | |
| CAATATGCTCAAGTATTATC+AGG | - | 51330:10604-10623 | MS.gene07080:CDS | 30.0% | |
| CAATCTCAAATTTCTTTCCT+TGG | - | 51330:8800-8819 | MS.gene07080:intron | 30.0% | |
| CATAAATGAGTGAAAATACG+GGG | - | 51330:6718-6737 | MS.gene07080:CDS | 30.0% | |
| CCATAAATGAGTGAAAATAC+GGG | - | 51330:6717-6736 | MS.gene07080:CDS | 30.0% | |
| GAGGATGAAGTAAATATGTA+TGG | + | 51330:6550-6569 | None:intergenic | 30.0% | |
| GGAGATAAGCATAAAATTTG+AGG | - | 51330:10766-10785 | MS.gene07080:CDS | 30.0% | |
| GTATATTGCACTTGAGTATT+TGG | - | 51330:9752-9771 | MS.gene07080:intron | 30.0% | |
| GTATTTATCTTTCCTTCCTT+TGG | - | 51330:8037-8056 | MS.gene07080:intron | 30.0% | |
| TATAGTTTGGATCATATGTG+TGG | - | 51330:6141-6160 | MS.gene07080:intron | 30.0% | |
| TATGATGAAGTCATGCATAT+AGG | - | 51330:6182-6201 | MS.gene07080:CDS | 30.0% | |
| TCATGTAGACTTATATGACA+AGG | - | 51330:6080-6099 | MS.gene07080:intron | 30.0% | |
| TGAAGAAATCACCAAGAAAT+GGG | - | 51330:10054-10073 | MS.gene07080:intron | 30.0% | |
| TGAAGTATACCAAAGATCAA+CGG | - | 51330:10744-10763 | MS.gene07080:intron | 30.0% | |
| TGAGAACGTTATATAGAAGT+GGG | + | 51330:6388-6407 | None:intergenic | 30.0% | |
| TGCACAATAATGTATACTAG+TGG | - | 51330:7728-7747 | MS.gene07080:intron | 30.0% | |
| TTCATATTTAGGCTCTTGAT+AGG | - | 51330:9945-9964 | MS.gene07080:intron | 30.0% | |
| TTGAAACTCATGTAGTAAAG+AGG | + | 51330:8729-8748 | None:intergenic | 30.0% | |
| ! | AAAACATGAGGTGTTAGAAT+CGG | + | 51330:6919-6938 | None:intergenic | 30.0% |
| ! | AAGCTTGTTTATGTTGATGT+AGG | - | 51330:6455-6474 | MS.gene07080:intron | 30.0% |
| ! | ACCGACAATTATATGGATTT+TGG | - | 51330:8576-8595 | MS.gene07080:intron | 30.0% |
| ! | CAAGGAAAGAAATTTGAGAT+TGG | + | 51330:8802-8821 | None:intergenic | 30.0% |
| ! | TCAAAACAAAAGTTTGAGGT+TGG | + | 51330:9599-9618 | None:intergenic | 30.0% |
| ! | TTCTTGGTGATTTCTTCATT+TGG | + | 51330:10052-10071 | None:intergenic | 30.0% |
| ! | TTTCTCTGTTTTGTGCAATT+AGG | - | 51330:6576-6595 | MS.gene07080:intron | 30.0% |
| ! | TTTTATGCAGTAAACTTGGT+TGG | - | 51330:8631-8650 | MS.gene07080:intron | 30.0% |
| ! | TTTTTCCTTTGCTCTTTTCT+GGG | - | 51330:10649-10668 | MS.gene07080:intron | 30.0% |
| !! | AAGGGCTTTGAACAAATAAA+AGG | - | 51330:10509-10528 | MS.gene07080:intron | 30.0% |
| !!! | TACTTATTTTGTTAGGGGAA+TGG | - | 51330:7796-7815 | MS.gene07080:intron | 30.0% |
| AAACTTGGTTGGATGAAGAA+AGG | - | 51330:8642-8661 | MS.gene07080:intron | 35.0% | |
| AAAGATAAAGCAACCAGCAT+TGG | - | 51330:7521-7540 | MS.gene07080:intron | 35.0% | |
| AAATCAGCTTCACGATTGAA+AGG | - | 51330:7369-7388 | MS.gene07080:CDS | 35.0% | |
| AACAATACTCTTACGAGCAT+AGG | - | 51330:9091-9110 | MS.gene07080:CDS | 35.0% | |
| AAGAAATGGGCATACACAAA+TGG | - | 51330:10067-10086 | MS.gene07080:intron | 35.0% | |
| AAGATAAAGCAACCAGCATT+GGG | - | 51330:7522-7541 | MS.gene07080:intron | 35.0% | |
| AAGTGCAATATACTCTCCTT+GGG | + | 51330:9745-9764 | None:intergenic | 35.0% | |
| AATGCTAATAGATCAGCGAA+TGG | + | 51330:8690-8709 | None:intergenic | 35.0% | |
| AATTGTGGTTGTGCTAACAA+CGG | + | 51330:9059-9078 | None:intergenic | 35.0% | |
| ACAAAGGAATCCATAGTAGA+TGG | - | 51330:9538-9557 | MS.gene07080:intron | 35.0% | |
| AGATCCACATCCATTTGATA+TGG | - | 51330:10541-10560 | MS.gene07080:intron | 35.0% | |
| ATGGATCAAATTGTCCTCAA+TGG | - | 51330:6344-6363 | MS.gene07080:intron | 35.0% | |
| ATGGATTCCTTTGTTAACTC+AGG | + | 51330:9532-9551 | None:intergenic | 35.0% | |
| ATGTATACTAGTGGAACAAG+TGG | - | 51330:7737-7756 | MS.gene07080:intron | 35.0% | |
| ATTTCTTTCCTTGGTGAGTT+AGG | - | 51330:8809-8828 | MS.gene07080:intron | 35.0% | |
| ATTTGTGTATGCCCATTTCT+TGG | + | 51330:10068-10087 | None:intergenic | 35.0% | |
| CAAAAACCCTGAGTTAACAA+AGG | - | 51330:9522-9541 | MS.gene07080:intron | 35.0% | |
| CATATATTATGAGCTTGTGG+TGG | + | 51330:7710-7729 | None:intergenic | 35.0% | |
| CATCTTACTACTACCTTGTA+GGG | - | 51330:7659-7678 | MS.gene07080:intron | 35.0% | |
| CCAAAAACTGTTCTTCTAAC+TGG | + | 51330:8465-8484 | None:intergenic | 35.0% | |
| CGTGTTCGACTAATAATAAC+CGG | - | 51330:8852-8871 | MS.gene07080:intron | 35.0% | |
| CTTTCCATATCAAATGGATG+TGG | + | 51330:10548-10567 | None:intergenic | 35.0% | |
| GAAGTATACCAAAGATCAAC+GGG | - | 51330:10745-10764 | MS.gene07080:intron | 35.0% | |
| GAGAAACAAGGTAACACATA+CGG | - | 51330:10171-10190 | MS.gene07080:intron | 35.0% | |
| GAGTCAAAACAACACCTTTA+GGG | + | 51330:7766-7785 | None:intergenic | 35.0% | |
| GCAAAGGAAAAAGTGAGAAA+AGG | + | 51330:10641-10660 | None:intergenic | 35.0% | |
| GTCTGAAAATGATCCTAGTT+GGG | - | 51330:6602-6621 | MS.gene07080:intron | 35.0% | |
| GTGAGAACGTTATATAGAAG+TGG | + | 51330:6389-6408 | None:intergenic | 35.0% | |
| GTGCATATATTATGAGCTTG+TGG | + | 51330:7713-7732 | None:intergenic | 35.0% | |
| TAGGTTTGACTGAAACTTGT+GGG | - | 51330:9326-9345 | MS.gene07080:intron | 35.0% | |
| TCATCTTACTACTACCTTGT+AGG | - | 51330:7658-7677 | MS.gene07080:intron | 35.0% | |
| TCTGAAAATGATCCTAGTTG+GGG | - | 51330:6603-6622 | MS.gene07080:intron | 35.0% | |
| TCTTCAATCTCTGAACTCAA+CGG | + | 51330:8885-8904 | None:intergenic | 35.0% | |
| TGAGTCAAAACAACACCTTT+AGG | + | 51330:7767-7786 | None:intergenic | 35.0% | |
| TGCACAAAACAGAGAAAACA+GGG | + | 51330:6573-6592 | None:intergenic | 35.0% | |
| TGCATTGAGGGATGATTTAA+TGG | - | 51330:8274-8293 | MS.gene07080:intron | 35.0% | |
| TGGATTCCTTTGTTAACTCA+GGG | + | 51330:9531-9550 | None:intergenic | 35.0% | |
| TGTGACAACCGACAATTATA+TGG | - | 51330:8569-8588 | MS.gene07080:intron | 35.0% | |
| TTGAAAAGGTCTATGAAGGT+AGG | - | 51330:8336-8355 | MS.gene07080:CDS | 35.0% | |
| TTGCACAAAACAGAGAAAAC+AGG | + | 51330:6574-6593 | None:intergenic | 35.0% | |
| TTTAGGGAAGGTTAATCCAT+AGG | + | 51330:8773-8792 | None:intergenic | 35.0% | |
| ! | AGACCTTTTCAAAGACTCTA+GGG | + | 51330:8328-8347 | None:intergenic | 35.0% |
| ! | CCAGTTAGAAGAACAGTTTT+TGG | - | 51330:8462-8481 | MS.gene07080:CDS | 35.0% |
| ! | CCCGTATTTTCACTCATTTA+TGG | + | 51330:6720-6739 | None:intergenic | 35.0% |
| ! | CTTTTTCCTTTGCTCTTTTC+TGG | - | 51330:10648-10667 | MS.gene07080:intron | 35.0% |
| ! | GTCTTTGAAAAGGTCTATGA+AGG | - | 51330:8332-8351 | MS.gene07080:CDS | 35.0% |
| ! | TAGACCTTTTCAAAGACTCT+AGG | + | 51330:8329-8348 | None:intergenic | 35.0% |
| ! | TAGGGGAATGGATATTTTCA+TGG | - | 51330:7808-7827 | MS.gene07080:intron | 35.0% |
| ! | TTGTTAACTCAGGGTTTTTG+TGG | + | 51330:9522-9541 | None:intergenic | 35.0% |
| !! | AAATTGTCCTCAATGGATTG+CGG | - | 51330:6351-6370 | MS.gene07080:intron | 35.0% |
| !! | ATCGACTGATTTGATAATGG+AGG | - | 51330:6686-6705 | MS.gene07080:CDS | 35.0% |
| !! | GATTGGTGAAATTTTAGGGA+AGG | + | 51330:8785-8804 | None:intergenic | 35.0% |
| !! | TCGACTGATTTGATAATGGA+GGG | - | 51330:6687-6706 | MS.gene07080:CDS | 35.0% |
| !! | TTACCAAGAGTATCATAGAG+AGG | + | 51330:6510-6529 | None:intergenic | 35.0% |
| !! | TTTGAGTTGCTTGTGAATGA+AGG | - | 51330:8244-8263 | MS.gene07080:intron | 35.0% |
| !! | TTTTTGGCATGCTCTACAAA+CGG | - | 51330:8478-8497 | MS.gene07080:CDS | 35.0% |
| !!! | GAATTTTTGCGTGTTACTTC+TGG | - | 51330:8903-8922 | MS.gene07080:intron | 35.0% |
| AAGAACTCTTCCCAGGAATA+TGG | + | 51330:7554-7573 | None:intergenic | 40.0% | |
| ACATTGTTTGGCATCTTCAG+GGG | - | 51330:9650-9669 | MS.gene07080:intron | 40.0% | |
| ACTAGAAGAAGTTCCAGAGA+TGG | - | 51330:9426-9445 | MS.gene07080:CDS | 40.0% | |
| AGATAAAGCAACCAGCATTG+GGG | - | 51330:7523-7542 | MS.gene07080:intron | 40.0% | |
| AGGAATCCATAGTAGATGGA+TGG | - | 51330:9542-9561 | MS.gene07080:intron | 40.0% | |
| AGGTACACAAACCAAGCTAT+GGG | + | 51330:6490-6509 | None:intergenic | 40.0% | |
| ATAGACACAAACACGAGTAC+TGG | + | 51330:9264-9283 | None:intergenic | 40.0% | |
| ATTCCTCAATTGTCCGATCA+AGG | + | 51330:8070-8089 | None:intergenic | 40.0% | |
| CAAGTGCAATATACTCTCCT+TGG | + | 51330:9746-9765 | None:intergenic | 40.0% | |
| CAATTATAGGGCTCACGAAT+TGG | - | 51330:6316-6335 | MS.gene07080:intron | 40.0% | |
| CATGGAACAGTTTGAAGACA+AGG | - | 51330:7826-7845 | MS.gene07080:intron | 40.0% | |
| CATTTGTAAGAACTCTTCCC+AGG | + | 51330:7561-7580 | None:intergenic | 40.0% | |
| CGTCTGAAAATGATCCTAGT+TGG | - | 51330:6601-6620 | MS.gene07080:intron | 40.0% | |
| CTAGAAGAAGTTCCAGAGAT+GGG | - | 51330:9427-9446 | MS.gene07080:intron | 40.0% | |
| CTAGGTTTGACTGAAACTTG+TGG | - | 51330:9325-9344 | MS.gene07080:intron | 40.0% | |
| CTGGGAAGAGTTCTTACAAA+TGG | - | 51330:7559-7578 | MS.gene07080:intron | 40.0% | |
| GAAGGATCTAACTGCATTGA+GGG | - | 51330:8262-8281 | MS.gene07080:intron | 40.0% | |
| GACATTGTTTGGCATCTTCA+GGG | - | 51330:9649-9668 | MS.gene07080:intron | 40.0% | |
| GCACAAAACAGAGAAAACAG+GGG | + | 51330:6572-6591 | None:intergenic | 40.0% | |
| GCATACACAAATGGTTTCGT+GGG | - | 51330:10076-10095 | MS.gene07080:intron | 40.0% | |
| GTACCTCTCTATGATACTCT+TGG | - | 51330:6504-6523 | MS.gene07080:intron | 40.0% | |
| GTGAAACCATCCATCTACTA+TGG | + | 51330:9551-9570 | None:intergenic | 40.0% | |
| GTTCGACTAATAATAACCGG+AGG | - | 51330:8855-8874 | MS.gene07080:intron | 40.0% | |
| TAAACATCAAATGCAGGGTC+CGG | - | 51330:7141-7160 | MS.gene07080:intron | 40.0% | |
| TATCCTTGATCGGACAATTG+AGG | - | 51330:8064-8083 | MS.gene07080:intron | 40.0% | |
| TGAAACCAACACTGTTTGCT+GGG | - | 51330:8300-8319 | MS.gene07080:CDS | 40.0% | |
| TGAAGGATCTAACTGCATTG+AGG | - | 51330:8261-8280 | MS.gene07080:intron | 40.0% | |
| TGACATTGTTTGGCATCTTC+AGG | - | 51330:9648-9667 | MS.gene07080:intron | 40.0% | |
| TGCTACGACCCTATATATTG+TGG | - | 51330:9863-9882 | MS.gene07080:intron | 40.0% | |
| TGTATGTCAAGGCTATGGTA+AGG | - | 51330:8932-8951 | MS.gene07080:intron | 40.0% | |
| TTCAGGTATCAAGAAAGCAG+TGG | - | 51330:8428-8447 | MS.gene07080:intron | 40.0% | |
| TTGAAACCAACACTGTTTGC+TGG | - | 51330:8299-8318 | MS.gene07080:CDS | 40.0% | |
| TTTGTTCAAAGCCCTTAAGC+TGG | + | 51330:10505-10524 | None:intergenic | 40.0% | |
| ! | AGAGGGAAATCAGTTTTCTC+CGG | - | 51330:9493-9512 | MS.gene07080:intron | 40.0% |
| ! | CGTGAAGCTGATTTACAATC+AGG | + | 51330:7363-7382 | None:intergenic | 40.0% |
| ! | CTTTGGCTCATATCCTTGAT+CGG | - | 51330:8054-8073 | MS.gene07080:intron | 40.0% |
| ! | GCTTTTGTATGTCAAGGCTA+TGG | - | 51330:8927-8946 | MS.gene07080:intron | 40.0% |
| ! | TCTGGTGCTTTTGTATGTCA+AGG | - | 51330:8921-8940 | MS.gene07080:intron | 40.0% |
| ! | TGGAGTTTCTTTTCCCTACA+AGG | + | 51330:7675-7694 | None:intergenic | 40.0% |
| ! | TGGGGTCACTCTTCATATTT+TGG | - | 51330:6621-6640 | MS.gene07080:CDS | 40.0% |
| ! | TTTTCAACGCACCAGCTTAA+GGG | - | 51330:10491-10510 | MS.gene07080:intron | 40.0% |
| !! | GAGAAATTGGTGTCAATGCT+AGG | + | 51330:6786-6805 | None:intergenic | 40.0% |
| !! | GCGTGAATTTGTTGATGGAA+AGG | - | 51330:6021-6040 | MS.gene07080:CDS | 40.0% |
| AGACATATCTCGCCACATGA+AGG | + | 51330:9472-9491 | None:intergenic | 45.0% | |
| AGAGGATTGTAACCCATCTC+TGG | + | 51330:9442-9461 | None:intergenic | 45.0% | |
| AGTTAGGTCAAAGCTCGGTT+AGG | - | 51330:8825-8844 | MS.gene07080:intron | 45.0% | |
| ATATGGCTTAACCCCAATGC+TGG | + | 51330:7537-7556 | None:intergenic | 45.0% | |
| ATGTGCATGCTTGGTACTGT+TGG | - | 51330:9376-9395 | MS.gene07080:intron | 45.0% | |
| CAAAACAGAGAAAACAGGGG+AGG | + | 51330:6569-6588 | None:intergenic | 45.0% | |
| CAAGGATATGAGCCAAAGGA+AGG | + | 51330:8052-8071 | None:intergenic | 45.0% | |
| CCAAGCATGCACATTTCATC+AGG | + | 51330:9370-9389 | None:intergenic | 45.0% | |
| CCTGATGAAATGTGCATGCT+TGG | - | 51330:9367-9386 | MS.gene07080:intron | 45.0% | |
| CGATCAAGGATATGAGCCAA+AGG | + | 51330:8056-8075 | None:intergenic | 45.0% | |
| CTGCATGAACATATACCCCA+TGG | + | 51330:8127-8146 | None:intergenic | 45.0% | |
| GAGGTACACAAACCAAGCTA+TGG | + | 51330:6491-6510 | None:intergenic | 45.0% | |
| GCTTATCTCCCGTTGATCTT+TGG | + | 51330:10756-10775 | None:intergenic | 45.0% | |
| GGCATACACAAATGGTTTCG+TGG | - | 51330:10075-10094 | MS.gene07080:intron | 45.0% | |
| GGCTCACGAATTGGAGTTTA+TGG | - | 51330:6325-6344 | MS.gene07080:intron | 45.0% | |
| GTAGATGGATGGTTTCACAC+AGG | - | 51330:9553-9572 | MS.gene07080:intron | 45.0% | |
| GTGGCGAGATATGTCTTAGA+GGG | - | 51330:9476-9495 | MS.gene07080:intron | 45.0% | |
| GTTGACTGCTGAGAGAAACA+AGG | - | 51330:10159-10178 | MS.gene07080:intron | 45.0% | |
| TATGAAGAGTGACCCCAACT+AGG | + | 51330:6618-6637 | None:intergenic | 45.0% | |
| TGGGGTTAAGCCATATTCCT+GGG | - | 51330:7541-7560 | MS.gene07080:intron | 45.0% | |
| TGGTGAGTTAGGTCAAAGCT+CGG | - | 51330:8820-8839 | MS.gene07080:intron | 45.0% | |
| TGTGGCGAGATATGTCTTAG+AGG | - | 51330:9475-9494 | MS.gene07080:intron | 45.0% | |
| TTGGGGTTAAGCCATATTCC+TGG | - | 51330:7540-7559 | MS.gene07080:intron | 45.0% | |
| ! | AGCTTTGACCTAACTCACCA+AGG | + | 51330:8820-8839 | None:intergenic | 45.0% |
| ! | ATCTGTTGGCTACTACCATG+GGG | - | 51330:8109-8128 | MS.gene07080:CDS | 45.0% |
| ! | ATGAGCTTGTGGTGGTGAAA+TGG | + | 51330:7702-7721 | None:intergenic | 45.0% |
| ! | CATCTGTTGGCTACTACCAT+GGG | - | 51330:8108-8127 | MS.gene07080:CDS | 45.0% |
| ! | CTTTTCAACGCACCAGCTTA+AGG | - | 51330:10490-10509 | MS.gene07080:intron | 45.0% |
| ! | GAAACCAACACTGTTTGCTG+GGG | - | 51330:8301-8320 | MS.gene07080:CDS | 45.0% |
| ! | GGTCCCTAGAGTCTTTGAAA+AGG | - | 51330:8322-8341 | MS.gene07080:CDS | 45.0% |
| ! | TGTGGTGGTGAAATGGTTGA+TGG | + | 51330:7695-7714 | None:intergenic | 45.0% |
| ! | TTCCATAAGGGTGCATCTGT+TGG | - | 51330:8095-8114 | MS.gene07080:CDS | 45.0% |
| !! | GAGATGGGTTACAATCCTCT+TGG | - | 51330:9442-9461 | MS.gene07080:intron | 45.0% |
| !! | GGATGGCGTGAATTTGTTGA+TGG | - | 51330:6016-6035 | MS.gene07080:CDS | 45.0% |
| !!! | ACGGTTTTAAAGTGCAGCTG+TGG | - | 51330:9837-9856 | MS.gene07080:intron | 45.0% |
| !! | TAAAAATAAAGAAAAATTTA+AGG | + | 51330:6756-6775 | None:intergenic | 5.0% |
| !!! | ATATTTTAAAATTATTAACA+CGG | - | 51330:9217-9236 | MS.gene07080:CDS | 5.0% |
| !!! | ATTTTTAATTACTTATTTAT+CGG | - | 51330:7069-7088 | MS.gene07080:CDS | 5.0% |
| !!! | TATTTTATTTTATTATAGTT+TGG | - | 51330:6128-6147 | MS.gene07080:intron | 5.0% |
| AGCCAACAGATGCACCCTTA+TGG | + | 51330:8100-8119 | None:intergenic | 50.0% | |
| CCACATGAAGGAGTTCCAAG+AGG | + | 51330:9460-9479 | None:intergenic | 50.0% | |
| CCTCTTGGAACTCCTTCATG+TGG | - | 51330:9457-9476 | MS.gene07080:intron | 50.0% | |
| CTCTTACGAGCATAGGACTG+AGG | - | 51330:9098-9117 | MS.gene07080:intron | 50.0% | |
| GAGGACCCAGAAAAGAGCAA+AGG | + | 51330:10657-10676 | None:intergenic | 50.0% | |
| GGAACAAGTGGAGACCCTAA+AGG | - | 51330:7749-7768 | MS.gene07080:intron | 50.0% | |
| TAGGTCAAAGCTCGGTTAGG+AGG | - | 51330:8828-8847 | MS.gene07080:intron | 50.0% | |
| TCCATTGCCGCAATCCATTG+AGG | + | 51330:6361-6380 | None:intergenic | 50.0% | |
| TGTGGTTGTGCTAACAACGG+AGG | + | 51330:9056-9075 | None:intergenic | 50.0% | |
| TTGGCATCTTCAGGGGACAT+AGG | - | 51330:9657-9676 | MS.gene07080:intron | 50.0% | |
| ! | CTCAGGGTTTTTGTGGTAGC+CGG | + | 51330:9515-9534 | None:intergenic | 50.0% |
| ! | GCATCTGTTGGCTACTACCA+TGG | - | 51330:8107-8126 | MS.gene07080:CDS | 50.0% |
| !! | TCAATGGATTGCGGCAATGG+AGG | - | 51330:6360-6379 | MS.gene07080:intron | 50.0% |
| !! | TCCTCAATGGATTGCGGCAA+TGG | - | 51330:6357-6376 | MS.gene07080:intron | 50.0% |
| GGTTCAGCTCTACGTGCATC+TGG | - | 51330:6203-6222 | MS.gene07080:CDS | 55.0% | |
| TGAACTCAACGGTGCACCTC+CGG | + | 51330:8874-8893 | None:intergenic | 55.0% | |
| GGGACCCCAGCAAACAGTGT+TGG | + | 51330:8308-8327 | None:intergenic | 60.0% | |
| !! | GGCTTGTTGCGCCCATAGCT+TGG | - | 51330:6476-6495 | MS.gene07080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51330 | gene | 6010 | 10786 | 6010 | ID=MS.gene07080 |
| 51330 | mRNA | 6010 | 10786 | 6010 | ID=MS.gene07080.t1;Parent=MS.gene07080 |
| 51330 | exon | 10754 | 10786 | 10754 | ID=MS.gene07080.t1.exon1;Parent=MS.gene07080.t1 |
| 51330 | CDS | 10754 | 10786 | 10754 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 10561 | 10650 | 10561 | ID=MS.gene07080.t1.exon2;Parent=MS.gene07080.t1 |
| 51330 | CDS | 10561 | 10650 | 10561 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 10415 | 10471 | 10415 | ID=MS.gene07080.t1.exon3;Parent=MS.gene07080.t1 |
| 51330 | CDS | 10415 | 10471 | 10415 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 10271 | 10319 | 10271 | ID=MS.gene07080.t1.exon4;Parent=MS.gene07080.t1 |
| 51330 | CDS | 10271 | 10319 | 10271 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 9563 | 9639 | 9563 | ID=MS.gene07080.t1.exon5;Parent=MS.gene07080.t1 |
| 51330 | CDS | 9563 | 9639 | 9563 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 9406 | 9445 | 9406 | ID=MS.gene07080.t1.exon6;Parent=MS.gene07080.t1 |
| 51330 | CDS | 9406 | 9445 | 9406 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 9216 | 9310 | 9216 | ID=MS.gene07080.t1.exon7;Parent=MS.gene07080.t1 |
| 51330 | CDS | 9216 | 9310 | 9216 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 8949 | 9116 | 8949 | ID=MS.gene07080.t1.exon8;Parent=MS.gene07080.t1 |
| 51330 | CDS | 8949 | 9116 | 8949 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 8666 | 8776 | 8666 | ID=MS.gene07080.t1.exon9;Parent=MS.gene07080.t1 |
| 51330 | CDS | 8666 | 8776 | 8666 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 8443 | 8530 | 8443 | ID=MS.gene07080.t1.exon10;Parent=MS.gene07080.t1 |
| 51330 | CDS | 8443 | 8530 | 8443 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 8297 | 8363 | 8297 | ID=MS.gene07080.t1.exon11;Parent=MS.gene07080.t1 |
| 51330 | CDS | 8297 | 8363 | 8297 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 8080 | 8155 | 8080 | ID=MS.gene07080.t1.exon12;Parent=MS.gene07080.t1 |
| 51330 | CDS | 8080 | 8155 | 8080 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 7848 | 7965 | 7848 | ID=MS.gene07080.t1.exon13;Parent=MS.gene07080.t1 |
| 51330 | CDS | 7848 | 7965 | 7848 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 7222 | 7467 | 7222 | ID=MS.gene07080.t1.exon14;Parent=MS.gene07080.t1 |
| 51330 | CDS | 7222 | 7467 | 7222 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 6987 | 7126 | 6987 | ID=MS.gene07080.t1.exon15;Parent=MS.gene07080.t1 |
| 51330 | CDS | 6987 | 7126 | 6987 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 6616 | 6798 | 6616 | ID=MS.gene07080.t1.exon16;Parent=MS.gene07080.t1 |
| 51330 | CDS | 6616 | 6798 | 6616 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 6171 | 6290 | 6171 | ID=MS.gene07080.t1.exon17;Parent=MS.gene07080.t1 |
| 51330 | CDS | 6171 | 6290 | 6171 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| 51330 | exon | 6010 | 6063 | 6010 | ID=MS.gene07080.t1.exon18;Parent=MS.gene07080.t1 |
| 51330 | CDS | 6010 | 6063 | 6010 | ID=cds.MS.gene07080.t1;Parent=MS.gene07080.t1 |
| Gene Sequence |
| Protein sequence |
