Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85832.t1 | RHN51194.1 | 82.8 | 616 | 80 | 1 | 1 | 590 | 1 | 616 | 8.40E-285 | 989.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85832.t1 | Q05196 | 50.4 | 568 | 258 | 7 | 24 | 569 | 58 | 623 | 7.3e-144 | 512.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85832.t1 | A0A396HH90 | 82.8 | 616 | 80 | 1 | 1 | 590 | 1 | 616 | 6.1e-285 | 989.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85832.t1 | MTR_6g040190 | 81.818 | 616 | 86 | 1 | 1 | 590 | 1 | 616 | 0.0 | 1011 |
MS.gene85832.t1 | MTR_1g097440 | 61.622 | 641 | 191 | 11 | 4 | 596 | 8 | 641 | 0.0 | 753 |
MS.gene85832.t1 | MTR_6g040070 | 70.753 | 465 | 113 | 7 | 99 | 553 | 1 | 452 | 0.0 | 629 |
MS.gene85832.t1 | MTR_6g040070 | 35.764 | 288 | 163 | 6 | 25 | 292 | 15 | 300 | 4.39e-41 | 159 |
MS.gene85832.t1 | MTR_4g085540 | 52.028 | 567 | 247 | 9 | 22 | 569 | 31 | 591 | 0.0 | 535 |
MS.gene85832.t1 | MTR_1g019150 | 57.589 | 448 | 174 | 6 | 11 | 447 | 21 | 463 | 7.83e-174 | 508 |
MS.gene85832.t1 | MTR_3g102040 | 50.264 | 569 | 238 | 13 | 12 | 565 | 17 | 555 | 9.05e-167 | 489 |
MS.gene85832.t1 | MTR_7g102730 | 40.933 | 579 | 283 | 10 | 25 | 567 | 10 | 565 | 2.89e-125 | 382 |
MS.gene85832.t1 | MTR_1g061870 | 46.667 | 435 | 208 | 8 | 25 | 452 | 15 | 432 | 1.90e-121 | 369 |
MS.gene85832.t1 | MTR_3g065190 | 38.202 | 178 | 107 | 3 | 19 | 194 | 19 | 195 | 5.73e-33 | 130 |
MS.gene85832.t1 | MTR_3g065190 | 31.183 | 186 | 107 | 6 | 203 | 385 | 28 | 195 | 2.02e-18 | 87.8 |
MS.gene85832.t1 | MTR_1723s0010 | 74.026 | 77 | 19 | 1 | 3 | 78 | 2 | 78 | 4.03e-32 | 119 |
MS.gene85832.t1 | MTR_1g020080 | 28.409 | 264 | 161 | 7 | 23 | 263 | 95 | 353 | 1.12e-25 | 110 |
MS.gene85832.t1 | MTR_1g020080 | 24.825 | 286 | 195 | 9 | 115 | 389 | 99 | 375 | 7.86e-20 | 92.8 |
MS.gene85832.t1 | MTR_1g020080 | 28.272 | 191 | 115 | 4 | 14 | 187 | 179 | 364 | 3.71e-17 | 84.7 |
MS.gene85832.t1 | MTR_1889s0010 | 75.385 | 65 | 16 | 0 | 16 | 80 | 11 | 75 | 1.57e-25 | 100 |
MS.gene85832.t1 | MTR_3g101370 | 28.417 | 278 | 168 | 9 | 12 | 264 | 80 | 351 | 4.94e-25 | 108 |
MS.gene85832.t1 | MTR_3g101370 | 23.509 | 285 | 195 | 9 | 115 | 386 | 95 | 369 | 3.28e-18 | 87.8 |
MS.gene85832.t1 | MTR_3g101370 | 27.933 | 179 | 107 | 4 | 26 | 187 | 188 | 361 | 9.24e-13 | 70.9 |
MS.gene85832.t1 | MTR_8g022050 | 27.208 | 283 | 160 | 8 | 26 | 271 | 63 | 336 | 2.69e-23 | 103 |
MS.gene85832.t1 | MTR_8g022050 | 26.871 | 294 | 169 | 10 | 114 | 373 | 63 | 344 | 1.93e-17 | 85.5 |
MS.gene85832.t1 | MTR_8g022050 | 25.275 | 182 | 116 | 4 | 201 | 381 | 63 | 225 | 6.62e-12 | 68.2 |
MS.gene85832.t1 | MTR_4g131970 | 27.068 | 266 | 164 | 7 | 23 | 263 | 72 | 332 | 1.59e-22 | 100 |
MS.gene85832.t1 | MTR_4g131970 | 24.573 | 293 | 187 | 10 | 115 | 388 | 76 | 353 | 1.14e-19 | 92.0 |
MS.gene85832.t1 | MTR_2g022950 | 26.592 | 267 | 165 | 8 | 23 | 263 | 58 | 319 | 2.42e-22 | 100 |
MS.gene85832.t1 | MTR_2g022950 | 23.077 | 286 | 201 | 7 | 115 | 388 | 62 | 340 | 2.55e-19 | 90.9 |
MS.gene85832.t1 | MTR_4g124940 | 27.473 | 273 | 152 | 8 | 26 | 261 | 47 | 310 | 4.94e-22 | 99.0 |
MS.gene85832.t1 | MTR_4g124940 | 26.621 | 293 | 177 | 7 | 114 | 381 | 47 | 326 | 8.83e-21 | 95.5 |
MS.gene85832.t1 | MTR_4g124940 | 25.121 | 207 | 133 | 6 | 201 | 404 | 47 | 234 | 8.25e-15 | 77.0 |
MS.gene85832.t1 | MTR_6g040200 | 60.256 | 78 | 29 | 1 | 451 | 528 | 7 | 82 | 4.36e-20 | 85.5 |
MS.gene85832.t1 | MTR_3g109090 | 24.542 | 273 | 163 | 6 | 26 | 262 | 45 | 310 | 6.10e-20 | 93.2 |
MS.gene85832.t1 | MTR_3g109090 | 30.055 | 183 | 106 | 6 | 201 | 381 | 45 | 207 | 3.46e-15 | 78.6 |
MS.gene85832.t1 | MTR_3g109090 | 24.542 | 273 | 163 | 6 | 26 | 262 | 61 | 326 | 6.85e-20 | 93.2 |
MS.gene85832.t1 | MTR_3g109090 | 30.055 | 183 | 106 | 6 | 201 | 381 | 61 | 223 | 3.66e-15 | 78.6 |
MS.gene85832.t1 | MTR_2g097960 | 23.944 | 284 | 167 | 7 | 23 | 262 | 13 | 291 | 1.24e-18 | 89.0 |
MS.gene85832.t1 | MTR_3g075500 | 29.703 | 202 | 127 | 6 | 186 | 385 | 100 | 288 | 6.43e-18 | 85.1 |
MS.gene85832.t1 | MTR_3g075500 | 29.474 | 190 | 112 | 4 | 23 | 196 | 107 | 290 | 3.12e-17 | 82.8 |
MS.gene85832.t1 | MTR_4g086600 | 24.555 | 281 | 164 | 7 | 26 | 263 | 117 | 392 | 9.54e-18 | 86.7 |
MS.gene85832.t1 | MTR_4g086600 | 27.094 | 203 | 138 | 4 | 202 | 401 | 118 | 313 | 1.02e-12 | 70.9 |
MS.gene85832.t1 | MTR_4g052940 | 27.273 | 242 | 160 | 6 | 25 | 258 | 110 | 343 | 8.90e-17 | 84.0 |
MS.gene85832.t1 | MTR_4g052940 | 21.246 | 353 | 217 | 10 | 113 | 456 | 110 | 410 | 1.06e-12 | 71.2 |
MS.gene85832.t1 | MTR_4g052940 | 27.273 | 242 | 160 | 6 | 25 | 258 | 110 | 343 | 3.16e-16 | 80.9 |
MS.gene85832.t1 | MTR_3g075500 | 30.409 | 171 | 97 | 4 | 23 | 177 | 107 | 271 | 3.36e-16 | 79.3 |
MS.gene85832.t1 | MTR_3g075500 | 29.730 | 185 | 115 | 6 | 186 | 368 | 100 | 271 | 1.41e-15 | 77.8 |
MS.gene85832.t1 | MTR_3g075500 | 31.056 | 161 | 100 | 4 | 113 | 262 | 109 | 269 | 6.93e-11 | 63.5 |
MS.gene85832.t1 | MTR_7g118120 | 23.443 | 273 | 185 | 7 | 25 | 285 | 104 | 364 | 3.95e-16 | 81.6 |
MS.gene85832.t1 | MTR_4g104470 | 29.834 | 181 | 118 | 3 | 23 | 195 | 120 | 299 | 4.30e-16 | 79.7 |
MS.gene85832.t1 | MTR_4g104470 | 28.495 | 186 | 120 | 4 | 202 | 385 | 124 | 298 | 4.10e-14 | 73.9 |
MS.gene85832.t1 | MTR_4g104470 | 29.545 | 176 | 115 | 5 | 115 | 282 | 124 | 298 | 8.99e-11 | 63.5 |
MS.gene85832.t1 | MTR_1g056520 | 27.322 | 183 | 119 | 4 | 27 | 196 | 110 | 291 | 8.86e-16 | 79.0 |
MS.gene85832.t1 | MTR_1g056520 | 26.154 | 195 | 126 | 5 | 192 | 379 | 100 | 283 | 3.35e-11 | 65.1 |
MS.gene85832.t1 | MTR_1g020080 | 25.989 | 177 | 124 | 4 | 23 | 192 | 95 | 271 | 2.33e-15 | 77.8 |
MS.gene85832.t1 | MTR_3g101370 | 26.316 | 190 | 130 | 6 | 12 | 192 | 80 | 268 | 2.65e-15 | 77.4 |
MS.gene85832.t1 | MTR_5g030020 | 29.224 | 219 | 142 | 6 | 201 | 415 | 97 | 306 | 9.64e-15 | 75.9 |
MS.gene85832.t1 | MTR_4g122650 | 27.461 | 193 | 122 | 5 | 199 | 387 | 87 | 265 | 2.78e-14 | 76.6 |
MS.gene85832.t1 | MTR_8g007390 | 22.530 | 253 | 177 | 6 | 27 | 268 | 217 | 461 | 2.81e-14 | 76.6 |
MS.gene85832.t1 | MTR_3g027140 | 29.665 | 209 | 134 | 6 | 177 | 379 | 34 | 235 | 2.89e-14 | 73.2 |
MS.gene85832.t1 | MTR_3g027140 | 26.744 | 172 | 112 | 4 | 27 | 185 | 62 | 232 | 1.24e-11 | 65.5 |
MS.gene85832.t1 | MTR_8g007390 | 22.530 | 253 | 177 | 6 | 27 | 268 | 216 | 460 | 2.93e-14 | 76.6 |
MS.gene85832.t1 | MTR_7g010360 | 25.177 | 282 | 194 | 7 | 25 | 298 | 350 | 622 | 4.35e-14 | 75.9 |
MS.gene85832.t1 | MTR_7g010360 | 22.034 | 354 | 215 | 14 | 113 | 457 | 350 | 651 | 2.82e-11 | 67.0 |
MS.gene85832.t1 | MTR_7g104800 | 26.172 | 256 | 159 | 9 | 25 | 264 | 101 | 342 | 2.17e-13 | 73.2 |
MS.gene85832.t1 | MTR_7g099940 | 43.023 | 86 | 48 | 1 | 301 | 385 | 32 | 117 | 2.25e-13 | 68.2 |
MS.gene85832.t1 | MTR_2g022950 | 26.590 | 173 | 118 | 5 | 23 | 186 | 58 | 230 | 2.48e-13 | 70.9 |
MS.gene85832.t1 | MTR_7g107580 | 25.103 | 243 | 145 | 7 | 202 | 437 | 18 | 230 | 2.55e-13 | 72.0 |
MS.gene85832.t1 | MTR_7g107580 | 25.103 | 243 | 145 | 7 | 202 | 437 | 18 | 230 | 4.97e-13 | 71.6 |
MS.gene85832.t1 | MTR_7g106440 | 25.641 | 195 | 124 | 5 | 19 | 197 | 108 | 297 | 7.11e-13 | 70.5 |
MS.gene85832.t1 | MTR_7g106440 | 28.804 | 184 | 119 | 6 | 202 | 379 | 111 | 288 | 1.89e-12 | 68.9 |
MS.gene85832.t1 | MTR_2g022950 | 26.590 | 173 | 118 | 5 | 23 | 186 | 58 | 230 | 2.17e-12 | 68.6 |
MS.gene85832.t1 | MTR_7g013740 | 39.759 | 83 | 49 | 1 | 301 | 382 | 37 | 119 | 3.23e-12 | 65.1 |
MS.gene85832.t1 | MTR_2g026180 | 31.148 | 183 | 104 | 9 | 115 | 279 | 6 | 184 | 3.79e-12 | 69.3 |
MS.gene85832.t1 | MTR_2g026180 | 24.713 | 174 | 122 | 4 | 202 | 369 | 6 | 176 | 1.16e-11 | 67.8 |
MS.gene85832.t1 | MTR_1g064230 | 28.205 | 195 | 113 | 5 | 115 | 283 | 86 | 279 | 6.23e-12 | 67.0 |
MS.gene85832.t1 | MTR_1g064230 | 28.571 | 196 | 127 | 6 | 202 | 386 | 86 | 279 | 2.80e-11 | 65.1 |
MS.gene85832.t1 | MTR_5g097580 | 25.794 | 252 | 143 | 11 | 115 | 342 | 8 | 239 | 7.28e-12 | 68.6 |
MS.gene85832.t1 | MTR_5g097580 | 25.424 | 177 | 115 | 6 | 202 | 369 | 8 | 176 | 5.90e-11 | 65.5 |
MS.gene85832.t1 | MTR_5g097580 | 25.794 | 252 | 143 | 11 | 115 | 342 | 8 | 239 | 7.94e-12 | 68.2 |
MS.gene85832.t1 | MTR_5g097580 | 25.424 | 177 | 115 | 6 | 202 | 369 | 8 | 176 | 6.40e-11 | 65.5 |
MS.gene85832.t1 | MTR_8g076100 | 20.866 | 254 | 181 | 5 | 27 | 268 | 420 | 665 | 9.36e-12 | 68.6 |
MS.gene85832.t1 | MTR_8g076100 | 20.866 | 254 | 181 | 5 | 27 | 268 | 420 | 665 | 1.03e-11 | 68.6 |
MS.gene85832.t1 | MTR_8g076100 | 20.866 | 254 | 181 | 5 | 27 | 268 | 420 | 665 | 1.39e-11 | 68.2 |
MS.gene85832.t1 | MTR_7g107580 | 25.000 | 244 | 145 | 8 | 202 | 437 | 18 | 231 | 1.49e-11 | 67.0 |
MS.gene85832.t1 | MTR_3g055990 | 28.495 | 186 | 103 | 9 | 115 | 279 | 8 | 184 | 2.95e-11 | 66.2 |
MS.gene85832.t1 | MTR_3g055990 | 28.495 | 186 | 103 | 9 | 115 | 279 | 8 | 184 | 3.49e-11 | 66.2 |
MS.gene85832.t1 | MTR_7g094660 | 30.851 | 188 | 113 | 7 | 115 | 288 | 643 | 827 | 3.90e-11 | 66.6 |
MS.gene85832.t1 | MTR_7g094660 | 28.378 | 222 | 135 | 8 | 176 | 383 | 609 | 820 | 8.84e-11 | 65.5 |
MS.gene85832.t1 | MTR_1g045510 | 25.610 | 164 | 116 | 3 | 27 | 185 | 115 | 277 | 4.11e-11 | 64.7 |
MS.gene85832.t1 | MTR_4g088010 | 24.180 | 244 | 158 | 6 | 202 | 438 | 78 | 301 | 9.21e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85832.t1 | AT1G22760 | 52.962 | 574 | 252 | 7 | 10 | 567 | 33 | 604 | 0.0 | 577 |
MS.gene85832.t1 | AT1G71770 | 51.585 | 568 | 251 | 7 | 24 | 569 | 58 | 623 | 0.0 | 552 |
MS.gene85832.t1 | AT1G71770 | 51.585 | 568 | 251 | 7 | 24 | 569 | 58 | 623 | 0.0 | 552 |
MS.gene85832.t1 | AT4G34110 | 55.484 | 465 | 186 | 6 | 3 | 451 | 17 | 476 | 1.17e-174 | 509 |
MS.gene85832.t1 | AT2G23350 | 49.201 | 563 | 262 | 9 | 25 | 574 | 46 | 597 | 3.77e-168 | 494 |
MS.gene85832.t1 | AT1G49760 | 56.561 | 442 | 178 | 6 | 26 | 456 | 46 | 484 | 2.25e-167 | 492 |
MS.gene85832.t1 | AT1G49760 | 56.561 | 442 | 178 | 6 | 26 | 456 | 46 | 484 | 2.25e-167 | 492 |
MS.gene85832.t1 | AT1G34140 | 53.994 | 363 | 155 | 5 | 83 | 443 | 1 | 353 | 2.42e-114 | 347 |
MS.gene85832.t1 | AT1G34140 | 32.155 | 283 | 172 | 4 | 26 | 290 | 32 | 312 | 2.31e-36 | 140 |
MS.gene85832.t1 | AT2G36660 | 45.283 | 371 | 200 | 2 | 25 | 393 | 24 | 393 | 2.48e-105 | 330 |
MS.gene85832.t1 | AT3G16380 | 45.358 | 377 | 196 | 5 | 26 | 395 | 22 | 395 | 5.30e-102 | 320 |
MS.gene85832.t1 | AT3G16380 | 35.602 | 191 | 107 | 4 | 19 | 194 | 196 | 385 | 8.55e-24 | 105 |
MS.gene85832.t1 | AT3G16380 | 32.642 | 193 | 114 | 4 | 196 | 387 | 17 | 194 | 5.62e-22 | 100 |
MS.gene85832.t1 | AT2G18510 | 37.079 | 178 | 109 | 3 | 19 | 194 | 19 | 195 | 4.18e-32 | 127 |
MS.gene85832.t1 | AT2G18510 | 29.947 | 187 | 110 | 6 | 202 | 385 | 27 | 195 | 3.57e-17 | 84.0 |
MS.gene85832.t1 | AT2G18510 | 25.143 | 175 | 125 | 5 | 113 | 282 | 25 | 198 | 9.67e-12 | 67.4 |
MS.gene85832.t1 | AT1G54080 | 28.467 | 274 | 150 | 7 | 26 | 262 | 64 | 328 | 1.98e-27 | 115 |
MS.gene85832.t1 | AT1G54080 | 28.621 | 290 | 165 | 9 | 105 | 367 | 55 | 329 | 7.93e-20 | 92.8 |
MS.gene85832.t1 | AT1G54080 | 29.508 | 183 | 107 | 6 | 201 | 381 | 64 | 226 | 2.93e-14 | 75.5 |
MS.gene85832.t1 | AT1G54080 | 28.417 | 278 | 149 | 8 | 26 | 262 | 64 | 332 | 5.17e-26 | 111 |
MS.gene85832.t1 | AT1G54080 | 28.571 | 294 | 164 | 10 | 105 | 367 | 55 | 333 | 1.61e-18 | 89.0 |
MS.gene85832.t1 | AT1G54080 | 29.412 | 187 | 106 | 7 | 201 | 381 | 64 | 230 | 6.59e-13 | 71.6 |
MS.gene85832.t1 | AT1G47490 | 31.481 | 270 | 152 | 10 | 23 | 264 | 99 | 363 | 2.00e-25 | 109 |
MS.gene85832.t1 | AT1G47490 | 24.169 | 331 | 216 | 11 | 115 | 432 | 103 | 411 | 1.18e-20 | 95.5 |
MS.gene85832.t1 | AT1G47490 | 29.381 | 194 | 109 | 5 | 17 | 187 | 185 | 373 | 1.99e-16 | 82.4 |
MS.gene85832.t1 | AT1G47500 | 31.111 | 270 | 153 | 10 | 23 | 264 | 101 | 365 | 2.26e-25 | 109 |
MS.gene85832.t1 | AT1G47500 | 23.867 | 331 | 217 | 11 | 115 | 432 | 105 | 413 | 1.51e-19 | 92.0 |
MS.gene85832.t1 | AT3G14100 | 27.106 | 273 | 153 | 6 | 26 | 261 | 60 | 323 | 1.82e-24 | 106 |
MS.gene85832.t1 | AT3G14100 | 28.358 | 268 | 164 | 9 | 114 | 361 | 60 | 319 | 4.28e-19 | 90.5 |
MS.gene85832.t1 | AT3G14100 | 30.055 | 183 | 106 | 5 | 201 | 381 | 60 | 222 | 1.28e-15 | 79.7 |
MS.gene85832.t1 | AT3G19130 | 29.054 | 296 | 166 | 10 | 26 | 282 | 109 | 399 | 4.27e-23 | 102 |
MS.gene85832.t1 | AT3G19130 | 26.341 | 205 | 137 | 5 | 202 | 403 | 110 | 303 | 1.53e-11 | 67.4 |
MS.gene85832.t1 | AT1G49600 | 29.097 | 299 | 173 | 10 | 18 | 282 | 112 | 405 | 1.03e-22 | 101 |
MS.gene85832.t1 | AT1G49600 | 24.281 | 313 | 194 | 10 | 115 | 397 | 121 | 420 | 1.06e-16 | 83.2 |
MS.gene85832.t1 | AT1G49600 | 27.742 | 310 | 184 | 10 | 18 | 292 | 112 | 416 | 2.09e-22 | 100 |
MS.gene85832.t1 | AT1G49600 | 24.919 | 309 | 191 | 10 | 115 | 398 | 121 | 413 | 3.13e-17 | 85.1 |
MS.gene85832.t1 | AT1G49600 | 27.742 | 310 | 184 | 10 | 18 | 292 | 112 | 416 | 2.09e-22 | 100 |
MS.gene85832.t1 | AT1G49600 | 24.919 | 309 | 191 | 10 | 115 | 398 | 121 | 413 | 3.13e-17 | 85.1 |
MS.gene85832.t1 | AT1G17370 | 27.407 | 270 | 153 | 8 | 26 | 261 | 55 | 315 | 6.06e-22 | 99.0 |
MS.gene85832.t1 | AT1G17370 | 27.138 | 269 | 171 | 8 | 114 | 365 | 55 | 315 | 2.03e-18 | 88.6 |
MS.gene85832.t1 | AT1G17370 | 26.374 | 182 | 114 | 4 | 201 | 381 | 55 | 217 | 2.62e-12 | 69.3 |
MS.gene85832.t1 | AT1G17370 | 27.106 | 273 | 153 | 8 | 26 | 261 | 55 | 318 | 1.53e-21 | 97.8 |
MS.gene85832.t1 | AT1G17370 | 27.574 | 272 | 169 | 9 | 114 | 365 | 55 | 318 | 1.32e-17 | 85.9 |
MS.gene85832.t1 | AT1G17370 | 26.374 | 182 | 114 | 4 | 201 | 381 | 55 | 217 | 2.92e-12 | 69.3 |
MS.gene85832.t1 | AT5G54900 | 25.373 | 268 | 160 | 9 | 26 | 263 | 61 | 318 | 9.72e-20 | 92.0 |
MS.gene85832.t1 | AT5G54900 | 23.569 | 297 | 191 | 9 | 114 | 390 | 61 | 341 | 5.33e-18 | 86.7 |
MS.gene85832.t1 | AT2G37220 | 30.645 | 186 | 101 | 3 | 27 | 185 | 93 | 277 | 1.03e-19 | 90.5 |
MS.gene85832.t1 | AT1G11650 | 24.735 | 283 | 182 | 8 | 5 | 262 | 42 | 318 | 2.51e-19 | 90.9 |
MS.gene85832.t1 | AT1G11650 | 22.754 | 334 | 213 | 10 | 114 | 432 | 63 | 366 | 2.75e-15 | 78.6 |
MS.gene85832.t1 | AT4G27000 | 25.940 | 266 | 159 | 8 | 26 | 263 | 81 | 336 | 8.35e-19 | 89.7 |
MS.gene85832.t1 | AT4G27000 | 23.469 | 294 | 189 | 10 | 114 | 388 | 81 | 357 | 2.80e-17 | 84.7 |
MS.gene85832.t1 | AT5G19350 | 22.759 | 290 | 195 | 9 | 114 | 380 | 25 | 308 | 1.08e-18 | 89.4 |
MS.gene85832.t1 | AT5G19350 | 24.731 | 279 | 165 | 7 | 23 | 262 | 22 | 294 | 3.28e-17 | 84.7 |
MS.gene85832.t1 | AT5G50250 | 30.556 | 180 | 116 | 3 | 23 | 194 | 111 | 289 | 1.21e-18 | 87.0 |
MS.gene85832.t1 | AT5G50250 | 28.796 | 191 | 123 | 4 | 197 | 385 | 110 | 289 | 2.41e-15 | 77.4 |
MS.gene85832.t1 | AT5G50250 | 28.652 | 178 | 118 | 4 | 113 | 282 | 113 | 289 | 5.92e-13 | 70.1 |
MS.gene85832.t1 | AT5G19350 | 22.378 | 286 | 197 | 7 | 114 | 380 | 25 | 304 | 3.22e-18 | 87.8 |
MS.gene85832.t1 | AT5G19350 | 23.723 | 274 | 170 | 6 | 23 | 262 | 22 | 290 | 1.25e-17 | 85.9 |
MS.gene85832.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 1.16e-17 | 85.1 |
MS.gene85832.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 1.43e-17 | 84.7 |
MS.gene85832.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 1.16e-17 | 85.1 |
MS.gene85832.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 1.43e-17 | 84.7 |
MS.gene85832.t1 | AT1G11650 | 24.254 | 268 | 172 | 8 | 5 | 247 | 42 | 303 | 5.49e-17 | 82.4 |
MS.gene85832.t1 | AT1G11650 | 22.177 | 248 | 178 | 6 | 114 | 352 | 63 | 304 | 1.57e-11 | 66.2 |
MS.gene85832.t1 | AT3G52150 | 32.597 | 181 | 114 | 5 | 202 | 379 | 78 | 253 | 6.00e-17 | 81.3 |
MS.gene85832.t1 | AT3G52150 | 26.437 | 174 | 112 | 4 | 27 | 185 | 78 | 250 | 4.58e-12 | 67.0 |
MS.gene85832.t1 | AT3G52150 | 32.597 | 181 | 114 | 5 | 202 | 379 | 78 | 253 | 6.00e-17 | 81.3 |
MS.gene85832.t1 | AT3G52150 | 26.437 | 174 | 112 | 4 | 27 | 185 | 78 | 250 | 4.58e-12 | 67.0 |
MS.gene85832.t1 | AT5G41690 | 18.876 | 445 | 270 | 8 | 26 | 380 | 69 | 512 | 1.42e-16 | 83.6 |
MS.gene85832.t1 | AT5G41690 | 18.876 | 445 | 270 | 8 | 26 | 380 | 69 | 512 | 1.42e-16 | 83.6 |
MS.gene85832.t1 | AT5G41690 | 18.876 | 445 | 270 | 8 | 26 | 380 | 69 | 512 | 1.42e-16 | 83.6 |
MS.gene85832.t1 | AT2G35410 | 29.570 | 186 | 116 | 5 | 202 | 381 | 97 | 273 | 1.57e-16 | 81.3 |
MS.gene85832.t1 | AT2G35410 | 28.834 | 163 | 100 | 3 | 115 | 262 | 97 | 258 | 5.40e-14 | 73.6 |
MS.gene85832.t1 | AT1G01080 | 31.606 | 193 | 112 | 6 | 107 | 281 | 102 | 292 | 2.24e-16 | 80.5 |
MS.gene85832.t1 | AT1G01080 | 29.240 | 171 | 112 | 6 | 197 | 362 | 105 | 271 | 2.05e-12 | 68.6 |
MS.gene85832.t1 | AT1G01080 | 31.443 | 194 | 112 | 6 | 107 | 281 | 102 | 293 | 8.59e-16 | 79.0 |
MS.gene85832.t1 | AT1G01080 | 29.070 | 172 | 112 | 6 | 197 | 362 | 105 | 272 | 4.37e-12 | 67.8 |
MS.gene85832.t1 | AT1G47500 | 28.272 | 191 | 120 | 7 | 23 | 203 | 101 | 284 | 2.49e-15 | 77.8 |
MS.gene85832.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 4.12e-15 | 78.6 |
MS.gene85832.t1 | AT4G00830 | 23.297 | 279 | 188 | 7 | 113 | 386 | 116 | 373 | 1.11e-13 | 74.3 |
MS.gene85832.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 4.12e-15 | 78.6 |
MS.gene85832.t1 | AT4G00830 | 23.297 | 279 | 188 | 7 | 113 | 386 | 116 | 373 | 1.11e-13 | 74.3 |
MS.gene85832.t1 | AT4G00830 | 26.966 | 267 | 176 | 7 | 25 | 282 | 116 | 372 | 4.12e-15 | 78.6 |
MS.gene85832.t1 | AT4G00830 | 23.297 | 279 | 188 | 7 | 113 | 386 | 116 | 373 | 1.11e-13 | 74.3 |
MS.gene85832.t1 | AT1G47490 | 28.796 | 191 | 119 | 7 | 23 | 203 | 99 | 282 | 7.47e-15 | 76.3 |
MS.gene85832.t1 | AT1G47490 | 30.994 | 171 | 101 | 6 | 225 | 391 | 129 | 286 | 8.69e-12 | 67.0 |
MS.gene85832.t1 | AT3G52380 | 25.134 | 187 | 124 | 3 | 23 | 193 | 114 | 300 | 9.35e-15 | 76.3 |
MS.gene85832.t1 | AT3G52380 | 27.174 | 184 | 130 | 4 | 202 | 383 | 118 | 299 | 3.31e-11 | 65.5 |
MS.gene85832.t1 | AT1G17640 | 27.869 | 183 | 116 | 4 | 202 | 382 | 68 | 236 | 1.11e-14 | 76.6 |
MS.gene85832.t1 | AT1G17640 | 27.869 | 183 | 116 | 4 | 202 | 382 | 68 | 236 | 1.11e-14 | 76.6 |
MS.gene85832.t1 | AT1G17640 | 27.869 | 183 | 116 | 4 | 202 | 382 | 68 | 236 | 1.11e-14 | 76.6 |
MS.gene85832.t1 | AT1G01080 | 31.250 | 176 | 102 | 5 | 107 | 264 | 102 | 276 | 1.58e-14 | 74.7 |
MS.gene85832.t1 | AT1G01080 | 30.055 | 183 | 116 | 8 | 197 | 372 | 105 | 282 | 6.57e-13 | 70.1 |
MS.gene85832.t1 | AT1G60000 | 27.976 | 168 | 114 | 3 | 24 | 185 | 84 | 250 | 1.72e-14 | 74.3 |
MS.gene85832.t1 | AT4G00830 | 26.119 | 268 | 171 | 7 | 25 | 283 | 116 | 365 | 4.83e-14 | 75.5 |
MS.gene85832.t1 | AT4G00830 | 22.826 | 276 | 185 | 6 | 113 | 386 | 116 | 365 | 9.30e-13 | 71.2 |
MS.gene85832.t1 | AT4G00830 | 26.119 | 268 | 171 | 7 | 25 | 283 | 116 | 365 | 4.83e-14 | 75.5 |
MS.gene85832.t1 | AT4G00830 | 22.826 | 276 | 185 | 6 | 113 | 386 | 116 | 365 | 9.30e-13 | 71.2 |
MS.gene85832.t1 | AT1G45100 | 26.102 | 295 | 163 | 7 | 22 | 267 | 155 | 443 | 5.94e-14 | 75.1 |
MS.gene85832.t1 | AT4G36960 | 24.359 | 312 | 172 | 10 | 115 | 369 | 5 | 309 | 2.17e-13 | 72.8 |
MS.gene85832.t1 | AT4G36960 | 24.359 | 312 | 172 | 10 | 115 | 369 | 5 | 309 | 2.17e-13 | 72.8 |
MS.gene85832.t1 | AT5G47620 | 27.835 | 194 | 111 | 7 | 202 | 369 | 8 | 198 | 4.16e-13 | 72.0 |
MS.gene85832.t1 | AT2G47310 | 26.396 | 197 | 133 | 4 | 202 | 394 | 112 | 300 | 4.27e-13 | 72.4 |
MS.gene85832.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 6.34e-13 | 71.6 |
MS.gene85832.t1 | AT5G03580 | 37.500 | 80 | 50 | 0 | 305 | 384 | 18 | 97 | 6.93e-13 | 65.5 |
MS.gene85832.t1 | AT5G03580 | 38.824 | 85 | 50 | 2 | 195 | 278 | 11 | 94 | 2.28e-11 | 61.2 |
MS.gene85832.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 7.22e-13 | 71.6 |
MS.gene85832.t1 | AT2G44710 | 20.866 | 254 | 182 | 6 | 27 | 269 | 131 | 376 | 7.50e-13 | 72.0 |
MS.gene85832.t1 | AT2G44710 | 20.866 | 254 | 182 | 6 | 27 | 269 | 216 | 461 | 1.10e-12 | 71.6 |
MS.gene85832.t1 | AT2G44710 | 20.866 | 254 | 182 | 6 | 27 | 269 | 216 | 461 | 1.10e-12 | 71.6 |
MS.gene85832.t1 | AT4G16280 | 25.134 | 187 | 134 | 3 | 109 | 289 | 116 | 302 | 1.51e-12 | 70.9 |
MS.gene85832.t1 | AT4G16280 | 25.688 | 218 | 140 | 6 | 175 | 388 | 99 | 298 | 4.62e-12 | 69.3 |
MS.gene85832.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 6.06e-12 | 68.9 |
MS.gene85832.t1 | AT4G00830 | 23.214 | 280 | 187 | 8 | 113 | 386 | 116 | 373 | 1.80e-12 | 70.5 |
MS.gene85832.t1 | AT4G00830 | 25.556 | 270 | 176 | 8 | 25 | 282 | 116 | 372 | 4.04e-11 | 66.2 |
MS.gene85832.t1 | AT5G47620 | 27.072 | 181 | 107 | 7 | 202 | 369 | 8 | 176 | 1.95e-12 | 70.1 |
MS.gene85832.t1 | AT5G47620 | 29.240 | 171 | 93 | 8 | 115 | 262 | 8 | 173 | 7.69e-12 | 68.2 |
MS.gene85832.t1 | AT5G47620 | 27.072 | 181 | 107 | 7 | 202 | 369 | 8 | 176 | 1.95e-12 | 70.1 |
MS.gene85832.t1 | AT5G47620 | 29.240 | 171 | 93 | 8 | 115 | 262 | 8 | 173 | 7.69e-12 | 68.2 |
MS.gene85832.t1 | AT5G47620 | 27.072 | 181 | 107 | 7 | 202 | 369 | 8 | 176 | 1.95e-12 | 70.1 |
MS.gene85832.t1 | AT5G47620 | 29.240 | 171 | 93 | 8 | 115 | 262 | 8 | 173 | 7.69e-12 | 68.2 |
MS.gene85832.t1 | AT4G16280 | 25.967 | 181 | 128 | 3 | 115 | 289 | 122 | 302 | 2.26e-12 | 70.5 |
MS.gene85832.t1 | AT4G16280 | 25.688 | 218 | 140 | 6 | 175 | 388 | 99 | 298 | 7.25e-12 | 68.9 |
MS.gene85832.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 7.83e-12 | 68.9 |
MS.gene85832.t1 | AT4G16280 | 25.967 | 181 | 128 | 3 | 115 | 289 | 47 | 227 | 2.71e-12 | 70.1 |
MS.gene85832.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 41 | 198 | 7.80e-12 | 68.6 |
MS.gene85832.t1 | AT4G16280 | 25.688 | 218 | 140 | 6 | 175 | 388 | 24 | 223 | 8.66e-12 | 68.6 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.49e-12 | 68.6 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.49e-12 | 68.6 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.49e-12 | 68.6 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.49e-12 | 68.6 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 6.49e-12 | 68.6 |
MS.gene85832.t1 | AT2G37510 | 39.474 | 76 | 45 | 1 | 295 | 369 | 25 | 100 | 7.51e-12 | 63.9 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 1.00e-11 | 67.8 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 1.00e-11 | 67.8 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 1.00e-11 | 67.8 |
MS.gene85832.t1 | AT5G55550 | 29.167 | 192 | 98 | 9 | 115 | 279 | 8 | 188 | 1.00e-11 | 67.8 |
MS.gene85832.t1 | AT3G52660 | 24.066 | 241 | 171 | 5 | 25 | 258 | 92 | 327 | 1.15e-11 | 67.8 |
MS.gene85832.t1 | AT3G52660 | 24.066 | 241 | 171 | 5 | 25 | 258 | 92 | 327 | 1.15e-11 | 67.8 |
MS.gene85832.t1 | AT3G52660 | 24.066 | 241 | 171 | 5 | 25 | 258 | 92 | 327 | 1.15e-11 | 67.8 |
MS.gene85832.t1 | AT4G26650 | 25.263 | 190 | 132 | 5 | 189 | 369 | 1 | 189 | 1.35e-11 | 67.4 |
MS.gene85832.t1 | AT4G26650 | 26.087 | 184 | 126 | 5 | 195 | 369 | 10 | 192 | 1.44e-11 | 67.4 |
MS.gene85832.t1 | AT4G03110 | 43.210 | 81 | 45 | 1 | 299 | 378 | 344 | 424 | 1.70e-11 | 67.0 |
MS.gene85832.t1 | AT3G46020 | 31.111 | 90 | 61 | 1 | 304 | 392 | 7 | 96 | 2.15e-11 | 61.2 |
MS.gene85832.t1 | AT3G13224 | 25.301 | 166 | 107 | 5 | 202 | 365 | 21 | 171 | 3.36e-11 | 65.9 |
MS.gene85832.t1 | AT3G13224 | 25.301 | 166 | 107 | 5 | 202 | 365 | 12 | 162 | 5.75e-11 | 64.7 |
Find 129 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATGACATACCGCTTTAC+TGG | 0.235434 | 6.4:-14773487 | None:intergenic |
TTGCTCCAGTGGTTTCTGTT+AGG | 0.261932 | 6.4:+14771542 | MS.gene85832:CDS |
AACGGGAACTCTAAATGTTT+TGG | 0.290568 | 6.4:+14772971 | MS.gene85832:CDS |
GCCGTTGGAACCACTATCTT+TGG | 0.291556 | 6.4:-14771421 | None:intergenic |
GATCCTCTCATTCGGAAAAC+TGG | 0.296987 | 6.4:+14772575 | MS.gene85832:CDS |
AATGGTCAATCTAGGGGATT+TGG | 0.306755 | 6.4:+14772710 | MS.gene85832:CDS |
TGGACATGTGCTTTCTTGTA+AGG | 0.312279 | 6.4:+14772673 | MS.gene85832:CDS |
TCTAAATACAATGGTCAAAA+TGG | 0.321666 | 6.4:+14774483 | MS.gene85832:CDS |
TTTGCTGCTGTCGTACTTGC+TGG | 0.335337 | 6.4:-14774336 | None:intergenic |
TGATATGGCTGGATGTAATT+TGG | 0.337632 | 6.4:-14774256 | None:intergenic |
TTGGGCCACAGAAACATATA+AGG | 0.339551 | 6.4:-14773629 | None:intergenic |
AAACTCACTTGCTTCAACTT+TGG | 0.343816 | 6.4:+14774602 | MS.gene85832:CDS |
CCCTGCCTCTGAAGGTGATA+TGG | 0.344309 | 6.4:-14774271 | None:intergenic |
TTGTATTTAGACCCTTGGTT+CGG | 0.356031 | 6.4:-14774471 | None:intergenic |
TGCTCCAGTGGTTTCTGTTA+GGG | 0.357944 | 6.4:+14771543 | MS.gene85832:CDS |
TTGAACTATGTTACTCTGAA+TGG | 0.368953 | 6.4:+14772521 | MS.gene85832:CDS |
ACCTTTGATGTCTGATTGCT+TGG | 0.371815 | 6.4:-14774801 | None:intergenic |
TGGATAGCAATGGTCAATCT+AGG | 0.378409 | 6.4:+14772702 | MS.gene85832:CDS |
TATTATGGGCAAGGTACATT+TGG | 0.380004 | 6.4:+14774157 | MS.gene85832:CDS |
GACCATTGTATTTAGACCCT+TGG | 0.384743 | 6.4:-14774476 | None:intergenic |
TGTATTTAGACCCTTGGTTC+GGG | 0.398817 | 6.4:-14774470 | None:intergenic |
CTCATCGAGATCCTCTCATT+CGG | 0.404413 | 6.4:+14772567 | MS.gene85832:CDS |
CCAACGGCTTTGACCGGTGC+TGG | 0.405111 | 6.4:+14771436 | MS.gene85832:CDS |
CTTTCCTGTCCTCTTTGCGT+TGG | 0.419707 | 6.4:-14773648 | None:intergenic |
TTTCCTGTCCTCTTTGCGTT+GGG | 0.420351 | 6.4:-14773647 | None:intergenic |
TTCCAGCCACAGTTCATGTT+AGG | 0.422595 | 6.4:+14774211 | MS.gene85832:CDS |
TGGATTCATCGTTTGACTGC+CGG | 0.438493 | 6.4:-14774526 | None:intergenic |
GGACAGGAAAGCTCAATTGC+AGG | 0.441542 | 6.4:+14773660 | MS.gene85832:CDS |
GGATTCATCGTTTGACTGCC+GGG | 0.445707 | 6.4:-14774525 | None:intergenic |
CAGAAACCACTGGAGCAATC+TGG | 0.446450 | 6.4:-14771537 | None:intergenic |
TTGTACGTTGGTGATCTTGA+AGG | 0.446826 | 6.4:+14771478 | MS.gene85832:CDS |
GAAATGAATGGAAAGATGAT+TGG | 0.448870 | 6.4:+14773598 | MS.gene85832:CDS |
CAAGTCTTTGTACACTTGAA+TGG | 0.449373 | 6.4:-14774120 | None:intergenic |
CACCTAACATGAACTGTGGC+TGG | 0.452510 | 6.4:-14774213 | None:intergenic |
TGATGCTCGTGGCCGTAGCA+AGG | 0.453334 | 6.4:+14773428 | MS.gene85832:CDS |
TCGCCTCAGCCAAACGGATA+CGG | 0.457960 | 6.4:+14774187 | MS.gene85832:CDS |
ATTGAGGCGATTCGATTCCT+TGG | 0.460513 | 6.4:+14774825 | MS.gene85832:CDS |
GATTTCATCACCAAAGATAG+TGG | 0.460581 | 6.4:+14771411 | MS.gene85832:CDS |
GACCCTTGGTTCGGGTTATG+AGG | 0.462045 | 6.4:-14774462 | None:intergenic |
CGTGGCCGTAGCAAGGGCTT+CGG | 0.462959 | 6.4:+14773435 | MS.gene85832:CDS |
CTCGATGTCCCTGCCTCTGA+AGG | 0.465894 | 6.4:-14774279 | None:intergenic |
TAGCTGCTGAATCTGAGCTT+TGG | 0.466989 | 6.4:-14773006 | None:intergenic |
GCCTCTGAAGGTGATATGGC+TGG | 0.468011 | 6.4:-14774267 | None:intergenic |
TTCATGTTAGGTGTTGGAAC+TGG | 0.470772 | 6.4:+14774223 | MS.gene85832:CDS |
GCCATATCACCTTCAGAGGC+AGG | 0.471754 | 6.4:+14774270 | MS.gene85832:CDS |
TGATAATGAAAGATAAGAAC+GGG | 0.472074 | 6.4:+14772954 | MS.gene85832:CDS |
AGAACATTTATATCCTCTGC+TGG | 0.472397 | 6.4:+14774767 | MS.gene85832:CDS |
TACTAAAGAAAATCAACATC+GGG | 0.474307 | 6.4:+14774632 | MS.gene85832:CDS |
GGCTGGAAACCGTATCCGTT+TGG | 0.476240 | 6.4:-14774196 | None:intergenic |
AATGGGACCACAACTAATGA+TGG | 0.477121 | 6.4:+14773046 | MS.gene85832:CDS |
GGCTTCCTCAGAAGTAGAAA+AGG | 0.477831 | 6.4:-14773466 | None:intergenic |
GCTTTCTTGTAAGGTTGCTA+TGG | 0.481734 | 6.4:+14772682 | MS.gene85832:CDS |
AATGATAAGAAAGTTTATGT+AGG | 0.485281 | 6.4:+14772800 | MS.gene85832:CDS |
CTCATTTCGCCTCAGCCAAA+CGG | 0.486466 | 6.4:+14774181 | MS.gene85832:CDS |
GGCAGGGACATCGAGGGAAT+AGG | 0.496250 | 6.4:+14774287 | MS.gene85832:CDS |
GGATAGCAATGGTCAATCTA+GGG | 0.497370 | 6.4:+14772703 | MS.gene85832:CDS |
AGGATGGGTGGGCGTCCAGC+AGG | 0.506024 | 6.4:+14774307 | MS.gene85832:CDS |
CATCGAGGGAATAGGATGGG+TGG | 0.507712 | 6.4:+14774295 | MS.gene85832:CDS |
AAGTGTTGAAAAGCTGCTTA+AGG | 0.508202 | 6.4:-14772910 | None:intergenic |
TGAGAAAACATAATACGAAT+GGG | 0.509410 | 6.4:-14772548 | None:intergenic |
AACTTCTCCAATGCTCGTGA+TGG | 0.509824 | 6.4:+14771613 | MS.gene85832:CDS |
ACATACACATTAGTGAACTT+AGG | 0.510507 | 6.4:-14772854 | None:intergenic |
GTGGTTCCAACGGCTTTGAC+CGG | 0.514270 | 6.4:+14771430 | MS.gene85832:CDS |
ATACAAACCATCACGAGCAT+TGG | 0.514373 | 6.4:-14771620 | None:intergenic |
ACCATGACGGTGATTGTCAA+TGG | 0.518236 | 6.4:-14774568 | None:intergenic |
CATCAGTATATGATTCAGAA+AGG | 0.518661 | 6.4:-14772883 | None:intergenic |
CCACAGTTCATGTTAGGTGT+TGG | 0.519887 | 6.4:+14774217 | MS.gene85832:CDS |
ATGAGAAAACATAATACGAA+TGG | 0.522254 | 6.4:-14772549 | None:intergenic |
GATGCTCGTGGCCGTAGCAA+GGG | 0.526704 | 6.4:+14773429 | MS.gene85832:CDS |
ATGATAAGAAAGTTTATGTA+GGG | 0.526737 | 6.4:+14772801 | MS.gene85832:CDS |
ATACAGTCATCTCTTGGCTA+TGG | 0.528110 | 6.4:+14771583 | MS.gene85832:CDS |
GTTCAGCCAGATTGCTCCAG+TGG | 0.530685 | 6.4:+14771531 | MS.gene85832:CDS |
ACTGCTGTTGAGAAGTTGAA+TGG | 0.532720 | 6.4:+14773028 | MS.gene85832:CDS |
CAGATGATACAGTCATCTCT+TGG | 0.533145 | 6.4:+14771577 | MS.gene85832:CDS |
GAGGTTGCAGCACTTGCAGA+TGG | 0.534402 | 6.4:-14774546 | None:intergenic |
CTGCTGTTGAGAAGTTGAAT+GGG | 0.538447 | 6.4:+14773029 | MS.gene85832:CDS |
TGGCCCAACGCAAAGAGGAC+AGG | 0.543729 | 6.4:+14773644 | MS.gene85832:CDS |
CCAGCACCGGTCAAAGCCGT+TGG | 0.547983 | 6.4:-14771436 | None:intergenic |
TCAGACATCAAAGGTGATTG+AGG | 0.554226 | 6.4:+14774809 | MS.gene85832:CDS |
AACCTTCCCATCATTAGTTG+TGG | 0.559527 | 6.4:-14773053 | None:intergenic |
ACTTGCTGGAAGTTACCTGC+TGG | 0.561738 | 6.4:-14774322 | None:intergenic |
TGTACGTTGGTGATCTTGAA+GGG | 0.569691 | 6.4:+14771479 | MS.gene85832:CDS |
ATCGAGGGAATAGGATGGGT+GGG | 0.570681 | 6.4:+14774296 | MS.gene85832:CDS |
TGCCCATAATAAAATTGTTG+CGG | 0.575659 | 6.4:-14774145 | None:intergenic |
AAACCGTATCCGTTTGGCTG+AGG | 0.576720 | 6.4:-14774190 | None:intergenic |
GTGGATATGTCTGTAGATCC+CGG | 0.577216 | 6.4:+14774507 | MS.gene85832:CDS |
CCAATGTGATTACGAACTGC+AGG | 0.577917 | 6.4:-14774864 | None:intergenic |
ATTCTCAAATCTTCCAGCAC+CGG | 0.579811 | 6.4:-14771449 | None:intergenic |
CTACTAAAGAAAATCAACAT+CGG | 0.581357 | 6.4:+14774631 | MS.gene85832:CDS |
TGCGGCAGCTGCTAATGCGA+TGG | 0.584096 | 6.4:+14772493 | MS.gene85832:intron |
TGGAACAATAATATCATGCA+AGG | 0.584496 | 6.4:+14773246 | MS.gene85832:CDS |
GTGATAATGAAAGATAAGAA+CGG | 0.585610 | 6.4:+14772953 | MS.gene85832:CDS |
TGGGCCACAGAAACATATAA+GGG | 0.593978 | 6.4:-14773628 | None:intergenic |
AAAAGATATGAGAAATTACA+AGG | 0.594728 | 6.4:+14773151 | MS.gene85832:CDS |
GGGACATCGAGGGAATAGGA+TGG | 0.597122 | 6.4:+14774291 | MS.gene85832:CDS |
TCTTGAAGGGAACGTGAATG+AGG | 0.601096 | 6.4:+14771492 | MS.gene85832:CDS |
TCCAGCCATATCACCTTCAG+AGG | 0.601841 | 6.4:+14774266 | MS.gene85832:CDS |
CAAAACCGAAGCCCTTGCTA+CGG | 0.604667 | 6.4:-14773440 | None:intergenic |
TAAGCCCTTATATGTTTCTG+TGG | 0.606849 | 6.4:+14773624 | MS.gene85832:CDS |
TTCCTTGGTGAAGCTTCAAG+AGG | 0.611698 | 6.4:+14774840 | MS.gene85832:CDS |
TCCATTGACAATCACCGTCA+TGG | 0.612971 | 6.4:+14774567 | MS.gene85832:CDS |
GAACATTTATATCCTCTGCT+GGG | 0.614538 | 6.4:+14774768 | MS.gene85832:CDS |
TTCTGAATCATATACTGATG+AGG | 0.614844 | 6.4:+14772886 | MS.gene85832:CDS |
ATACAATGGTCAAAATGGCG+TGG | 0.615038 | 6.4:+14774488 | MS.gene85832:CDS |
GGACATCGAGGGAATAGGAT+GGG | 0.619886 | 6.4:+14774292 | MS.gene85832:CDS |
GACCACAACTAATGATGGGA+AGG | 0.621274 | 6.4:+14773051 | MS.gene85832:CDS |
CAAACCCTAACAGAAACCAC+TGG | 0.623004 | 6.4:-14771547 | None:intergenic |
TTCTGTGGCCCAACGCAAAG+AGG | 0.624780 | 6.4:+14773639 | MS.gene85832:CDS |
AGAAACATCAATAGATAACA+AGG | 0.626663 | 6.4:+14772625 | MS.gene85832:CDS |
CGACCTCATAACCCGAACCA+AGG | 0.627910 | 6.4:+14774459 | MS.gene85832:CDS |
ACCAAAGATAGTGGTTCCAA+CGG | 0.628784 | 6.4:+14771420 | MS.gene85832:CDS |
CCATATCACCTTCAGAGGCA+GGG | 0.629042 | 6.4:+14774271 | MS.gene85832:CDS |
ATGGGACCACAACTAATGAT+GGG | 0.633994 | 6.4:+14773047 | MS.gene85832:CDS |
TCTGCAATTCAAGTATCGGG+TGG | 0.637021 | 6.4:+14774085 | MS.gene85832:CDS |
CAGGTAATGTCTGATGCTCG+TGG | 0.638564 | 6.4:+14773417 | MS.gene85832:intron |
GGTGTAAGACGACCCAGCAG+AGG | 0.642146 | 6.4:-14774780 | None:intergenic |
GATAGCAATGGTCAATCTAG+GGG | 0.648957 | 6.4:+14772704 | MS.gene85832:CDS |
AAGGTTGCTATGGATAGCAA+TGG | 0.649706 | 6.4:+14772692 | MS.gene85832:CDS |
CCTGCAGTTCGTAATCACAT+TGG | 0.649736 | 6.4:+14774864 | MS.gene85832:CDS |
TTCAGAGGCAGGGACATCGA+GGG | 0.651455 | 6.4:+14774281 | MS.gene85832:CDS |
GAGAATGCTTCATTGTACGT+TGG | 0.652942 | 6.4:+14771466 | MS.gene85832:CDS |
AACCAAGGGTCTAAATACAA+TGG | 0.653471 | 6.4:+14774474 | MS.gene85832:CDS |
CTTCAGAGGCAGGGACATCG+AGG | 0.656911 | 6.4:+14774280 | MS.gene85832:CDS |
GACCTCATAACCCGAACCAA+GGG | 0.657603 | 6.4:+14774460 | MS.gene85832:CDS |
ACCAAGCAATCAGACATCAA+AGG | 0.661183 | 6.4:+14774800 | MS.gene85832:CDS |
GACCTCTTGAAGCTTCACCA+AGG | 0.662786 | 6.4:-14774842 | None:intergenic |
TTCTGAGGAAGCCAGTAAAG+CGG | 0.665676 | 6.4:+14773476 | MS.gene85832:CDS |
ATGACGGTGATTGTCAATGG+AGG | 0.724574 | 6.4:-14774565 | None:intergenic |
CCAACACCTAACATGAACTG+TGG | 0.743437 | 6.4:-14774217 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAAAAAAAAATTTCAATA+AGG | - | chr6.4:14771797-14771816 | None:intergenic | 10.0% |
!!! | ATATTCTTTTTTTTTTTTGA+GGG | + | chr6.4:14771725-14771744 | MS.gene85832:intron | 10.0% |
!!! | ATTGAAATTTTTTTTTTGTT+TGG | + | chr6.4:14771798-14771817 | MS.gene85832:intron | 10.0% |
!!! | TATATTCTTTTTTTTTTTTG+AGG | + | chr6.4:14771724-14771743 | MS.gene85832:intron | 10.0% |
!! | AAAAAATAATTCTTTCAACA+TGG | - | chr6.4:14772168-14772187 | None:intergenic | 15.0% |
!! | AAAACATGATTATAAATACT+AGG | - | chr6.4:14771937-14771956 | None:intergenic | 15.0% |
!! | AAACATGATTATAAATACTA+GGG | - | chr6.4:14771936-14771955 | None:intergenic | 15.0% |
!! | AAATTTAATATTTCAGCAAA+TGG | - | chr6.4:14773797-14773816 | None:intergenic | 15.0% |
!! | AACAAAAAAACTTAGATTTA+CGG | - | chr6.4:14774376-14774395 | None:intergenic | 15.0% |
!! | TTAAATACTAATGTCAAATA+GGG | - | chr6.4:14772056-14772075 | None:intergenic | 15.0% |
!! | TTAACCACATTATAATTATA+AGG | - | chr6.4:14773728-14773747 | None:intergenic | 15.0% |
!! | TTGAATAATATTTGTATCTT+TGG | + | chr6.4:14773286-14773305 | MS.gene85832:intron | 15.0% |
!! | TTTACTATTTCAGAAAAAAT+AGG | - | chr6.4:14771912-14771931 | None:intergenic | 15.0% |
!!! | TATATATTATAGTAGTTTTG+AGG | + | chr6.4:14772286-14772305 | MS.gene85832:intron | 15.0% |
!!! | TATTCTTTTTTTTTTTTGAG+GGG | + | chr6.4:14771726-14771745 | MS.gene85832:intron | 15.0% |
!! | AAAAATTGCCATTGAAAAAT+TGG | + | chr6.4:14772763-14772782 | MS.gene85832:CDS | 20.0% |
!! | AAAAGATATGAGAAATTACA+AGG | + | chr6.4:14773151-14773170 | MS.gene85832:CDS | 20.0% |
!! | AATGATAAGAAAGTTTATGT+AGG | + | chr6.4:14772800-14772819 | MS.gene85832:CDS | 20.0% |
!! | ATGATAAGAAAGTTTATGTA+GGG | + | chr6.4:14772801-14772820 | MS.gene85832:CDS | 20.0% |
!! | CTTAAATACTAATGTCAAAT+AGG | - | chr6.4:14772057-14772076 | None:intergenic | 20.0% |
!! | TATACTTAAAAAACATTGAC+AGG | + | chr6.4:14773182-14773201 | MS.gene85832:CDS | 20.0% |
!! | TATGCTATCAATATATACAT+TGG | + | chr6.4:14774664-14774683 | MS.gene85832:intron | 20.0% |
!! | TCATAAAAAGAGGTTATATT+TGG | - | chr6.4:14773541-14773560 | None:intergenic | 20.0% |
!! | TCTTAATGATGAAAAATTGA+AGG | + | chr6.4:14773207-14773226 | MS.gene85832:CDS | 20.0% |
!! | TGTATTTAATATGTTTCTTC+AGG | + | chr6.4:14773398-14773417 | MS.gene85832:intron | 20.0% |
!! | TTAACTTCAAAAAAATTGTG+CGG | + | chr6.4:14772475-14772494 | MS.gene85832:intron | 20.0% |
!! | TTCACCTTATAATTATAATG+TGG | + | chr6.4:14773721-14773740 | MS.gene85832:intron | 20.0% |
!! | TTTGGAGAGAAAAAAAATAA+CGG | + | chr6.4:14771816-14771835 | MS.gene85832:intron | 20.0% |
!!! | ATATAGCTTCAAAATTCTTT+TGG | - | chr6.4:14772271-14772290 | None:intergenic | 20.0% |
!!! | ATTCTTTTTTTTTTTTGAGG+GGG | + | chr6.4:14771727-14771746 | MS.gene85832:intron | 20.0% |
!!! | TCTTTTTATTTATGAGTTGT+AGG | + | chr6.4:14772131-14772150 | MS.gene85832:intron | 20.0% |
!!! | TTTTAGATCAATGAAATGAA+TGG | + | chr6.4:14773586-14773605 | MS.gene85832:intron | 20.0% |
! | AATTCAACAGTTAGATTTAC+AGG | + | chr6.4:14774038-14774057 | MS.gene85832:intron | 25.0% |
! | AGAAACATCAATAGATAACA+AGG | + | chr6.4:14772625-14772644 | MS.gene85832:CDS | 25.0% |
! | AGAGAAAAAAAATAACGGTT+AGG | + | chr6.4:14771821-14771840 | MS.gene85832:intron | 25.0% |
! | AGATTTACGGAATAAATACT+TGG | - | chr6.4:14774363-14774382 | None:intergenic | 25.0% |
! | AGTTACATACAATATTGTGT+CGG | + | chr6.4:14774707-14774726 | MS.gene85832:intron | 25.0% |
! | ATGAGAAAACATAATACGAA+TGG | - | chr6.4:14772552-14772571 | None:intergenic | 25.0% |
! | ATGATCGAAAACCAAAAAAA+TGG | - | chr6.4:14773981-14774000 | None:intergenic | 25.0% |
! | ATTATTTATGCAGTACGATT+TGG | + | chr6.4:14773752-14773771 | MS.gene85832:intron | 25.0% |
! | ATTCAACAGTTAGATTTACA+GGG | + | chr6.4:14774039-14774058 | MS.gene85832:intron | 25.0% |
! | CTACTAAAGAAAATCAACAT+CGG | + | chr6.4:14774631-14774650 | MS.gene85832:CDS | 25.0% |
! | GGTATATTATAATGTACTGT+TGG | + | chr6.4:14774728-14774747 | MS.gene85832:intron | 25.0% |
! | TACTAAAGAAAATCAACATC+GGG | + | chr6.4:14774632-14774651 | MS.gene85832:CDS | 25.0% |
! | TCTAAATACAATGGTCAAAA+TGG | + | chr6.4:14774483-14774502 | MS.gene85832:CDS | 25.0% |
! | TGAGAAAACATAATACGAAT+GGG | - | chr6.4:14772551-14772570 | None:intergenic | 25.0% |
!! | ATAGAAGTTTGTTCATATGA+TGG | + | chr6.4:14773933-14773952 | MS.gene85832:intron | 25.0% |
!! | GGATCATATATTTTTCTTGA+TGG | + | chr6.4:14771748-14771767 | MS.gene85832:intron | 25.0% |
!! | GTGATAATGAAAGATAAGAA+CGG | + | chr6.4:14772953-14772972 | MS.gene85832:CDS | 25.0% |
!! | TAAGTTGTTACTCTTGTTAT+GGG | + | chr6.4:14772073-14772092 | MS.gene85832:intron | 25.0% |
!! | TGATAATGAAAGATAAGAAC+GGG | + | chr6.4:14772954-14772973 | MS.gene85832:CDS | 25.0% |
!! | TTAAGTTGTTACTCTTGTTA+TGG | + | chr6.4:14772072-14772091 | MS.gene85832:intron | 25.0% |
!! | TTTTTCTGCAATTCAAGTAT+CGG | + | chr6.4:14774081-14774100 | MS.gene85832:CDS | 25.0% |
!!! | GCACAATTTTTTTGAAGTTA+AGG | - | chr6.4:14772476-14772495 | None:intergenic | 25.0% |
!!! | TTTATGTAGGGTATTTTGTT+CGG | + | chr6.4:14772813-14772832 | MS.gene85832:CDS | 25.0% |
ACATACACATTAGTGAACTT+AGG | - | chr6.4:14772857-14772876 | None:intergenic | 30.0% | |
ATCAAGCATCTCATAAAAAG+AGG | - | chr6.4:14773551-14773570 | None:intergenic | 30.0% | |
ATTGCCATTGAAAAATTGGA+TGG | + | chr6.4:14772767-14772786 | MS.gene85832:CDS | 30.0% | |
CATCAGTATATGATTCAGAA+AGG | - | chr6.4:14772886-14772905 | None:intergenic | 30.0% | |
CTTAAACTCAACAACAATTG+TGG | - | chr6.4:14772026-14772045 | None:intergenic | 30.0% | |
GAAATGAATGGAAAGATGAT+TGG | + | chr6.4:14773598-14773617 | MS.gene85832:CDS | 30.0% | |
TGCCCATAATAAAATTGTTG+CGG | - | chr6.4:14774148-14774167 | None:intergenic | 30.0% | |
TGGAACAATAATATCATGCA+AGG | + | chr6.4:14773246-14773265 | MS.gene85832:CDS | 30.0% | |
TTCTATTCACAAGCAAGATT+TGG | - | chr6.4:14773919-14773938 | None:intergenic | 30.0% | |
TTCTGAATCATATACTGATG+AGG | + | chr6.4:14772886-14772905 | MS.gene85832:CDS | 30.0% | |
TTGAACTATGTTACTCTGAA+TGG | + | chr6.4:14772521-14772540 | MS.gene85832:CDS | 30.0% | |
! | AATTCTTTTGGCAAAGACAT+AGG | - | chr6.4:14772259-14772278 | None:intergenic | 30.0% |
! | CAACAATTTTATTATGGGCA+AGG | + | chr6.4:14774148-14774167 | MS.gene85832:CDS | 30.0% |
! | CTCCGCAACAATTTTATTAT+GGG | + | chr6.4:14774143-14774162 | MS.gene85832:CDS | 30.0% |
! | TTTTCTGCAATTCAAGTATC+GGG | + | chr6.4:14774082-14774101 | MS.gene85832:CDS | 30.0% |
!! | GGCATTACATGATACTTTTT+CGG | + | chr6.4:14772646-14772665 | MS.gene85832:CDS | 30.0% |
!!! | CATGCTTACTTCCATTTTTT+TGG | + | chr6.4:14773967-14773986 | MS.gene85832:intron | 30.0% |
AAACTCACTTGCTTCAACTT+TGG | + | chr6.4:14774602-14774621 | MS.gene85832:CDS | 35.0% | |
AACCAAGGGTCTAAATACAA+TGG | + | chr6.4:14774474-14774493 | MS.gene85832:CDS | 35.0% | |
AGAACATTTATATCCTCTGC+TGG | + | chr6.4:14774767-14774786 | MS.gene85832:CDS | 35.0% | |
ATGGACTTACACCTATTTCA+AGG | - | chr6.4:14773778-14773797 | None:intergenic | 35.0% | |
CAAGTCTTTGTACACTTGAA+TGG | - | chr6.4:14774123-14774142 | None:intergenic | 35.0% | |
GAACATTTATATCCTCTGCT+GGG | + | chr6.4:14774768-14774787 | MS.gene85832:CDS | 35.0% | |
GACTCAGAAAAAATCGGAAA+GGG | + | chr6.4:14773090-14773109 | MS.gene85832:CDS | 35.0% | |
GATTTCATCACCAAAGATAG+TGG | + | chr6.4:14771411-14771430 | MS.gene85832:CDS | 35.0% | |
TATTATGGGCAAGGTACATT+TGG | + | chr6.4:14774157-14774176 | MS.gene85832:CDS | 35.0% | |
TCTGAGTTTATGTTACTCAC+AGG | + | chr6.4:14772218-14772237 | MS.gene85832:intron | 35.0% | |
TGATATGGCTGGATGTAATT+TGG | - | chr6.4:14774259-14774278 | None:intergenic | 35.0% | |
TTCACAAGCAAGATTTGGAT+AGG | - | chr6.4:14773914-14773933 | None:intergenic | 35.0% | |
TTGTATCTTTGGTATGTGAG+TGG | + | chr6.4:14773297-14773316 | MS.gene85832:intron | 35.0% | |
TTGTATTTAGACCCTTGGTT+CGG | - | chr6.4:14774474-14774493 | None:intergenic | 35.0% | |
! | AACGGGAACTCTAAATGTTT+TGG | + | chr6.4:14772971-14772990 | MS.gene85832:CDS | 35.0% |
! | AAGCAGCTTTTCAACACTTT+TGG | + | chr6.4:14772914-14772933 | MS.gene85832:CDS | 35.0% |
! | CTCACAGGTCTATATCTTTT+TGG | + | chr6.4:14772233-14772252 | MS.gene85832:intron | 35.0% |
! | GCTCCGCAACAATTTTATTA+TGG | + | chr6.4:14774142-14774161 | MS.gene85832:CDS | 35.0% |
! | TAAGCCCTTATATGTTTCTG+TGG | + | chr6.4:14773624-14773643 | MS.gene85832:CDS | 35.0% |
!! | AAATTGAAGGAGCTGTTTTC+TGG | + | chr6.4:14773220-14773239 | MS.gene85832:CDS | 35.0% |
!! | AAGTGTTGAAAAGCTGCTTA+AGG | - | chr6.4:14772913-14772932 | None:intergenic | 35.0% |
!! | CATGCCATCCAATTTTTCAA+TGG | - | chr6.4:14772774-14772793 | None:intergenic | 35.0% |
!! | GCAAGTGAGTTTTTAGACAA+CGG | - | chr6.4:14774594-14774613 | None:intergenic | 35.0% |
!!! | ATGGGAAGGTTTTATTTGTC+CGG | + | chr6.4:14773065-14773084 | MS.gene85832:CDS | 35.0% |
!!! | CATGATACTTTTTCGGCTTT+TGG | + | chr6.4:14772653-14772672 | MS.gene85832:CDS | 35.0% |
AACAACAATTGTGGCCACTT+TGG | - | chr6.4:14772017-14772036 | None:intergenic | 40.0% | |
AACCTTCCCATCATTAGTTG+TGG | - | chr6.4:14773056-14773075 | None:intergenic | 40.0% | |
AAGGTTGCTATGGATAGCAA+TGG | + | chr6.4:14772692-14772711 | MS.gene85832:CDS | 40.0% | |
AATGGGACCACAACTAATGA+TGG | + | chr6.4:14773046-14773065 | MS.gene85832:CDS | 40.0% | |
AATGGTCAATCTAGGGGATT+TGG | + | chr6.4:14772710-14772729 | MS.gene85832:CDS | 40.0% | |
ACCAAGCAATCAGACATCAA+AGG | + | chr6.4:14774800-14774819 | MS.gene85832:CDS | 40.0% | |
ACCTTTGATGTCTGATTGCT+TGG | - | chr6.4:14774804-14774823 | None:intergenic | 40.0% | |
ACTGCTGTTGAGAAGTTGAA+TGG | + | chr6.4:14773028-14773047 | MS.gene85832:CDS | 40.0% | |
ATACAAACCATCACGAGCAT+TGG | - | chr6.4:14771623-14771642 | None:intergenic | 40.0% | |
ATACAATGGTCAAAATGGCG+TGG | + | chr6.4:14774488-14774507 | MS.gene85832:CDS | 40.0% | |
ATACAGTCATCTCTTGGCTA+TGG | + | chr6.4:14771583-14771602 | MS.gene85832:CDS | 40.0% | |
ATGGGACCACAACTAATGAT+GGG | + | chr6.4:14773047-14773066 | MS.gene85832:CDS | 40.0% | |
ATTCTCAAATCTTCCAGCAC+CGG | - | chr6.4:14771452-14771471 | None:intergenic | 40.0% | |
CAAATGACATACCGCTTTAC+TGG | - | chr6.4:14773490-14773509 | None:intergenic | 40.0% | |
CAGATGATACAGTCATCTCT+TGG | + | chr6.4:14771577-14771596 | MS.gene85832:CDS | 40.0% | |
CTGCTGTTGAGAAGTTGAAT+GGG | + | chr6.4:14773029-14773048 | MS.gene85832:CDS | 40.0% | |
GACCATTGTATTTAGACCCT+TGG | - | chr6.4:14774479-14774498 | None:intergenic | 40.0% | |
GAGAATGCTTCATTGTACGT+TGG | + | chr6.4:14771466-14771485 | MS.gene85832:CDS | 40.0% | |
GATAGCAATGGTCAATCTAG+GGG | + | chr6.4:14772704-14772723 | MS.gene85832:CDS | 40.0% | |
GCTTTCTTGTAAGGTTGCTA+TGG | + | chr6.4:14772682-14772701 | MS.gene85832:CDS | 40.0% | |
GGACTCAGAAAAAATCGGAA+AGG | + | chr6.4:14773089-14773108 | MS.gene85832:CDS | 40.0% | |
GGATAGCAATGGTCAATCTA+GGG | + | chr6.4:14772703-14772722 | MS.gene85832:CDS | 40.0% | |
GTATGTGAGTGGATACTCAA+TGG | + | chr6.4:14773308-14773327 | MS.gene85832:intron | 40.0% | |
TCAGAAAAAATCGGAAAGGG+AGG | + | chr6.4:14773093-14773112 | MS.gene85832:CDS | 40.0% | |
TCAGACATCAAAGGTGATTG+AGG | + | chr6.4:14774809-14774828 | MS.gene85832:CDS | 40.0% | |
TGGACATGTGCTTTCTTGTA+AGG | + | chr6.4:14772673-14772692 | MS.gene85832:CDS | 40.0% | |
TGGATAGCAATGGTCAATCT+AGG | + | chr6.4:14772702-14772721 | MS.gene85832:CDS | 40.0% | |
TGGGCCACAGAAACATATAA+GGG | - | chr6.4:14773631-14773650 | None:intergenic | 40.0% | |
TGTATTTAGACCCTTGGTTC+GGG | - | chr6.4:14774473-14774492 | None:intergenic | 40.0% | |
TTACAGGGTTGTGTAATTGC+AGG | + | chr6.4:14774054-14774073 | MS.gene85832:intron | 40.0% | |
TTGGGCCACAGAAACATATA+AGG | - | chr6.4:14773632-14773651 | None:intergenic | 40.0% | |
! | AATCCAGTTTTCCGAATGAG+AGG | - | chr6.4:14772581-14772600 | None:intergenic | 40.0% |
! | ACCAAAGATAGTGGTTCCAA+CGG | + | chr6.4:14771420-14771439 | MS.gene85832:CDS | 40.0% |
! | ACTGTTGGTTAAACAGATGC+TGG | + | chr6.4:14774743-14774762 | MS.gene85832:intron | 40.0% |
! | ATTTTGTTCGGCGTCAAGAA+AGG | + | chr6.4:14772825-14772844 | MS.gene85832:CDS | 40.0% |
! | TGTTGCCTTTTCTACTTCTG+AGG | + | chr6.4:14773461-14773480 | MS.gene85832:CDS | 40.0% |
! | TTTTAGACAACGGACCATGA+CGG | - | chr6.4:14774584-14774603 | None:intergenic | 40.0% |
!! | AAGGAGCTGTTTTCTGGATT+TGG | + | chr6.4:14773226-14773245 | MS.gene85832:CDS | 40.0% |
!! | GTACGATTTGGCCTTGAAAT+AGG | + | chr6.4:14773764-14773783 | MS.gene85832:intron | 40.0% |
!! | TGTACGTTGGTGATCTTGAA+GGG | + | chr6.4:14771479-14771498 | MS.gene85832:CDS | 40.0% |
!! | TTCATGTTAGGTGTTGGAAC+TGG | + | chr6.4:14774223-14774242 | MS.gene85832:CDS | 40.0% |
!! | TTGTACGTTGGTGATCTTGA+AGG | + | chr6.4:14771478-14771497 | MS.gene85832:CDS | 40.0% |
AACTTCTCCAATGCTCGTGA+TGG | + | chr6.4:14771613-14771632 | MS.gene85832:CDS | 45.0% | |
ACCATGACGGTGATTGTCAA+TGG | - | chr6.4:14774571-14774590 | None:intergenic | 45.0% | |
ATGACGGTGATTGTCAATGG+AGG | - | chr6.4:14774568-14774587 | None:intergenic | 45.0% | |
ATTGAGGCGATTCGATTCCT+TGG | + | chr6.4:14774825-14774844 | MS.gene85832:CDS | 45.0% | |
CAAACCCTAACAGAAACCAC+TGG | - | chr6.4:14771550-14771569 | None:intergenic | 45.0% | |
CACTACCAAATACGCCAAAG+TGG | + | chr6.4:14772000-14772019 | MS.gene85832:intron | 45.0% | |
CCAACACCTAACATGAACTG+TGG | - | chr6.4:14774220-14774239 | None:intergenic | 45.0% | |
CCAATGTGATTACGAACTGC+AGG | - | chr6.4:14774867-14774886 | None:intergenic | 45.0% | |
CCACAGTTCATGTTAGGTGT+TGG | + | chr6.4:14774217-14774236 | MS.gene85832:CDS | 45.0% | |
CCGGAGGACTCAGAAAAAAT+CGG | + | chr6.4:14773084-14773103 | MS.gene85832:CDS | 45.0% | |
CCTGCAGTTCGTAATCACAT+TGG | + | chr6.4:14774864-14774883 | MS.gene85832:CDS | 45.0% | |
CTCATCGAGATCCTCTCATT+CGG | + | chr6.4:14772567-14772586 | MS.gene85832:CDS | 45.0% | |
GATCCTCTCATTCGGAAAAC+TGG | + | chr6.4:14772575-14772594 | MS.gene85832:CDS | 45.0% | |
GGCTTCCTCAGAAGTAGAAA+AGG | - | chr6.4:14773469-14773488 | None:intergenic | 45.0% | |
GTGGATATGTCTGTAGATCC+CGG | + | chr6.4:14774507-14774526 | MS.gene85832:CDS | 45.0% | |
TAGCTGCTGAATCTGAGCTT+TGG | - | chr6.4:14773009-14773028 | None:intergenic | 45.0% | |
TCCATTGACAATCACCGTCA+TGG | + | chr6.4:14774567-14774586 | MS.gene85832:CDS | 45.0% | |
TCTTGAAGGGAACGTGAATG+AGG | + | chr6.4:14771492-14771511 | MS.gene85832:CDS | 45.0% | |
TGCTCCAGTGGTTTCTGTTA+GGG | + | chr6.4:14771543-14771562 | MS.gene85832:CDS | 45.0% | |
TGGATTCATCGTTTGACTGC+CGG | - | chr6.4:14774529-14774548 | None:intergenic | 45.0% | |
TTCCAGCCACAGTTCATGTT+AGG | + | chr6.4:14774211-14774230 | MS.gene85832:CDS | 45.0% | |
TTCCTTGGTGAAGCTTCAAG+AGG | + | chr6.4:14774840-14774859 | MS.gene85832:CDS | 45.0% | |
TTGCTCCAGTGGTTTCTGTT+AGG | + | chr6.4:14771542-14771561 | MS.gene85832:CDS | 45.0% | |
TTTCCTGTCCTCTTTGCGTT+GGG | - | chr6.4:14773650-14773669 | None:intergenic | 45.0% | |
! | GACCACAACTAATGATGGGA+AGG | + | chr6.4:14773051-14773070 | MS.gene85832:CDS | 45.0% |
! | TTCTGAGGAAGCCAGTAAAG+CGG | + | chr6.4:14773476-14773495 | MS.gene85832:CDS | 45.0% |
!! | TCTGCAATTCAAGTATCGGG+TGG | + | chr6.4:14774085-14774104 | MS.gene85832:CDS | 45.0% |
!!! | CCGATTTTTTCTGAGTCCTC+CGG | - | chr6.4:14773087-14773106 | None:intergenic | 45.0% |
!!! | GGAAGGTTTTATTTGTCCGG+AGG | + | chr6.4:14773068-14773087 | MS.gene85832:CDS | 45.0% |
!!! | ATTTTTTTAATTAAATAAGT+GGG | + | chr6.4:14772181-14772200 | MS.gene85832:intron | 5.0% |
!!! | TATTTTTTTAATTAAATAAG+TGG | + | chr6.4:14772180-14772199 | MS.gene85832:intron | 5.0% |
AAACCGTATCCGTTTGGCTG+AGG | - | chr6.4:14774193-14774212 | None:intergenic | 50.0% | |
ATCGAGGGAATAGGATGGGT+GGG | + | chr6.4:14774296-14774315 | MS.gene85832:CDS | 50.0% | |
CAAAACCGAAGCCCTTGCTA+CGG | - | chr6.4:14773443-14773462 | None:intergenic | 50.0% | |
CACCTAACATGAACTGTGGC+TGG | - | chr6.4:14774216-14774235 | None:intergenic | 50.0% | |
CAGAAACCACTGGAGCAATC+TGG | - | chr6.4:14771540-14771559 | None:intergenic | 50.0% | |
CAGGTAATGTCTGATGCTCG+TGG | + | chr6.4:14773417-14773436 | MS.gene85832:intron | 50.0% | |
CCATATCACCTTCAGAGGCA+GGG | + | chr6.4:14774271-14774290 | MS.gene85832:CDS | 50.0% | |
CTCATTTCGCCTCAGCCAAA+CGG | + | chr6.4:14774181-14774200 | MS.gene85832:CDS | 50.0% | |
CTTTCCTGTCCTCTTTGCGT+TGG | - | chr6.4:14773651-14773670 | None:intergenic | 50.0% | |
GACCTCATAACCCGAACCAA+GGG | + | chr6.4:14774460-14774479 | MS.gene85832:CDS | 50.0% | |
GACCTCTTGAAGCTTCACCA+AGG | - | chr6.4:14774845-14774864 | None:intergenic | 50.0% | |
GCCGTTGGAACCACTATCTT+TGG | - | chr6.4:14771424-14771443 | None:intergenic | 50.0% | |
GGACAGGAAAGCTCAATTGC+AGG | + | chr6.4:14773660-14773679 | MS.gene85832:CDS | 50.0% | |
GGACATCGAGGGAATAGGAT+GGG | + | chr6.4:14774292-14774311 | MS.gene85832:CDS | 50.0% | |
GGATTCATCGTTTGACTGCC+GGG | - | chr6.4:14774528-14774547 | None:intergenic | 50.0% | |
TCCAGCCATATCACCTTCAG+AGG | + | chr6.4:14774266-14774285 | MS.gene85832:CDS | 50.0% | |
TTTGCTGCTGTCGTACTTGC+TGG | - | chr6.4:14774339-14774358 | None:intergenic | 50.0% | |
! | ACTTGCTGGAAGTTACCTGC+TGG | - | chr6.4:14774325-14774344 | None:intergenic | 50.0% |
! | TGTGGCCACTTTGGCGTATT+TGG | - | chr6.4:14772008-14772027 | None:intergenic | 50.0% |
CATCGAGGGAATAGGATGGG+TGG | + | chr6.4:14774295-14774314 | MS.gene85832:CDS | 55.0% | |
CGACCTCATAACCCGAACCA+AGG | + | chr6.4:14774459-14774478 | MS.gene85832:CDS | 55.0% | |
GAGGTTGCAGCACTTGCAGA+TGG | - | chr6.4:14774549-14774568 | None:intergenic | 55.0% | |
GCCATATCACCTTCAGAGGC+AGG | + | chr6.4:14774270-14774289 | MS.gene85832:CDS | 55.0% | |
GGCTGGAAACCGTATCCGTT+TGG | - | chr6.4:14774199-14774218 | None:intergenic | 55.0% | |
GGGACATCGAGGGAATAGGA+TGG | + | chr6.4:14774291-14774310 | MS.gene85832:CDS | 55.0% | |
GTTCAGCCAGATTGCTCCAG+TGG | + | chr6.4:14771531-14771550 | MS.gene85832:CDS | 55.0% | |
TCGCCTCAGCCAAACGGATA+CGG | + | chr6.4:14774187-14774206 | MS.gene85832:CDS | 55.0% | |
TTCAGAGGCAGGGACATCGA+GGG | + | chr6.4:14774281-14774300 | MS.gene85832:CDS | 55.0% | |
TTCTGTGGCCCAACGCAAAG+AGG | + | chr6.4:14773639-14773658 | MS.gene85832:CDS | 55.0% | |
! | CCCTGCCTCTGAAGGTGATA+TGG | - | chr6.4:14774274-14774293 | None:intergenic | 55.0% |
! | GCCTCTGAAGGTGATATGGC+TGG | - | chr6.4:14774270-14774289 | None:intergenic | 55.0% |
! | GTGGTTCCAACGGCTTTGAC+CGG | + | chr6.4:14771430-14771449 | MS.gene85832:CDS | 55.0% |
!! | GACCCTTGGTTCGGGTTATG+AGG | - | chr6.4:14774465-14774484 | None:intergenic | 55.0% |
CTCGATGTCCCTGCCTCTGA+AGG | - | chr6.4:14774282-14774301 | None:intergenic | 60.0% | |
CTTCAGAGGCAGGGACATCG+AGG | + | chr6.4:14774280-14774299 | MS.gene85832:CDS | 60.0% | |
GATGCTCGTGGCCGTAGCAA+GGG | + | chr6.4:14773429-14773448 | MS.gene85832:CDS | 60.0% | |
GGCAGGGACATCGAGGGAAT+AGG | + | chr6.4:14774287-14774306 | MS.gene85832:CDS | 60.0% | |
GGTGTAAGACGACCCAGCAG+AGG | - | chr6.4:14774783-14774802 | None:intergenic | 60.0% | |
TGATGCTCGTGGCCGTAGCA+AGG | + | chr6.4:14773428-14773447 | MS.gene85832:CDS | 60.0% | |
TGCGGCAGCTGCTAATGCGA+TGG | + | chr6.4:14772493-14772512 | MS.gene85832:intron | 60.0% | |
TGGCCCAACGCAAAGAGGAC+AGG | + | chr6.4:14773644-14773663 | MS.gene85832:CDS | 60.0% | |
CGTGGCCGTAGCAAGGGCTT+CGG | + | chr6.4:14773435-14773454 | MS.gene85832:CDS | 65.0% | |
! | CCAACGGCTTTGACCGGTGC+TGG | + | chr6.4:14771436-14771455 | MS.gene85832:CDS | 65.0% |
!! | CCAGCACCGGTCAAAGCCGT+TGG | - | chr6.4:14771439-14771458 | None:intergenic | 65.0% |
AGGATGGGTGGGCGTCCAGC+AGG | + | chr6.4:14774307-14774326 | MS.gene85832:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 14771400 | 14774893 | 14771400 | ID=MS.gene85832 |
chr6.4 | mRNA | 14771400 | 14774893 | 14771400 | ID=MS.gene85832.t1;Parent=MS.gene85832 |
chr6.4 | exon | 14771400 | 14771634 | 14771400 | ID=MS.gene85832.t1.exon1;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14771400 | 14771634 | 14771400 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14772501 | 14773267 | 14772501 | ID=MS.gene85832.t1.exon2;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14772501 | 14773267 | 14772501 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14773420 | 14773497 | 14773420 | ID=MS.gene85832.t1.exon3;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14773420 | 14773497 | 14773420 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14773592 | 14773681 | 14773592 | ID=MS.gene85832.t1.exon4;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14773592 | 14773681 | 14773592 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14774076 | 14774363 | 14774076 | ID=MS.gene85832.t1.exon5;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14774076 | 14774363 | 14774076 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14774456 | 14774653 | 14774456 | ID=MS.gene85832.t1.exon6;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14774456 | 14774653 | 14774456 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
chr6.4 | exon | 14774759 | 14774893 | 14774759 | ID=MS.gene85832.t1.exon7;Parent=MS.gene85832.t1 |
chr6.4 | CDS | 14774759 | 14774893 | 14774759 | ID=cds.MS.gene85832.t1;Parent=MS.gene85832.t1 |
Gene Sequence |
Protein sequence |