Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52921.t1 | RHN51194.1 | 89.8 | 620 | 62 | 1 | 1 | 619 | 1 | 620 | 0.00E+00 | 1083.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52921.t1 | Q05196 | 50.5 | 620 | 271 | 9 | 24 | 615 | 58 | 669 | 3.9e-156 | 553.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52921.t1 | A0A396HH90 | 89.8 | 620 | 62 | 1 | 1 | 619 | 1 | 620 | 0.0e+00 | 1083.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52921.t1 | MTR_6g040190 | 88.871 | 620 | 68 | 1 | 1 | 619 | 1 | 620 | 0.0 | 1114 |
MS.gene52921.t1 | MTR_1g097440 | 64.000 | 650 | 196 | 10 | 1 | 621 | 1 | 641 | 0.0 | 810 |
MS.gene52921.t1 | MTR_6g040070 | 69.247 | 465 | 119 | 6 | 99 | 552 | 1 | 452 | 0.0 | 624 |
MS.gene52921.t1 | MTR_6g040070 | 34.694 | 196 | 108 | 5 | 18 | 196 | 100 | 292 | 5.67e-22 | 101 |
MS.gene52921.t1 | MTR_4g085540 | 52.827 | 619 | 257 | 11 | 22 | 616 | 31 | 638 | 0.0 | 593 |
MS.gene52921.t1 | MTR_3g102040 | 50.553 | 633 | 234 | 14 | 14 | 611 | 13 | 601 | 0.0 | 551 |
MS.gene52921.t1 | MTR_1g019150 | 58.186 | 452 | 170 | 6 | 12 | 446 | 14 | 463 | 3.99e-178 | 520 |
MS.gene52921.t1 | MTR_7g102730 | 41.626 | 615 | 308 | 10 | 25 | 607 | 10 | 605 | 2.11e-139 | 420 |
MS.gene52921.t1 | MTR_1g061870 | 46.035 | 454 | 217 | 8 | 4 | 451 | 1 | 432 | 2.02e-123 | 375 |
MS.gene52921.t1 | MTR_0913s0010 | 91.429 | 70 | 6 | 0 | 552 | 621 | 1 | 70 | 9.74e-36 | 129 |
MS.gene52921.t1 | MTR_3g065190 | 38.202 | 178 | 107 | 3 | 19 | 194 | 19 | 195 | 4.01e-33 | 131 |
MS.gene52921.t1 | MTR_3g065190 | 30.769 | 234 | 135 | 11 | 203 | 432 | 28 | 238 | 9.08e-16 | 80.1 |
MS.gene52921.t1 | MTR_1723s0010 | 74.026 | 77 | 19 | 1 | 3 | 78 | 2 | 78 | 2.30e-31 | 117 |
MS.gene52921.t1 | MTR_1889s0010 | 73.846 | 65 | 17 | 0 | 16 | 80 | 11 | 75 | 4.16e-25 | 99.8 |
MS.gene52921.t1 | MTR_3g101370 | 26.885 | 305 | 191 | 9 | 12 | 290 | 80 | 378 | 3.83e-24 | 105 |
MS.gene52921.t1 | MTR_3g101370 | 23.050 | 282 | 200 | 7 | 115 | 386 | 95 | 369 | 4.31e-19 | 90.5 |
MS.gene52921.t1 | MTR_0989s0020 | 70.423 | 71 | 19 | 1 | 546 | 616 | 9 | 77 | 6.38e-24 | 96.7 |
MS.gene52921.t1 | MTR_8g022050 | 26.690 | 281 | 164 | 6 | 26 | 271 | 63 | 336 | 1.14e-23 | 104 |
MS.gene52921.t1 | MTR_8g022050 | 24.913 | 289 | 181 | 10 | 114 | 373 | 63 | 344 | 5.09e-15 | 78.2 |
MS.gene52921.t1 | MTR_8g022050 | 25.824 | 182 | 115 | 5 | 201 | 381 | 63 | 225 | 4.32e-12 | 68.9 |
MS.gene52921.t1 | MTR_1g020080 | 27.068 | 266 | 162 | 7 | 23 | 263 | 95 | 353 | 1.50e-23 | 103 |
MS.gene52921.t1 | MTR_1g020080 | 24.028 | 283 | 201 | 7 | 115 | 389 | 99 | 375 | 1.44e-20 | 95.1 |
MS.gene52921.t1 | MTR_1g020080 | 28.877 | 187 | 111 | 4 | 18 | 187 | 183 | 364 | 1.29e-17 | 85.9 |
MS.gene52921.t1 | MTR_4g124940 | 26.937 | 271 | 156 | 6 | 26 | 261 | 47 | 310 | 1.62e-22 | 100 |
MS.gene52921.t1 | MTR_4g124940 | 24.658 | 292 | 184 | 7 | 114 | 381 | 47 | 326 | 2.99e-17 | 84.7 |
MS.gene52921.t1 | MTR_4g124940 | 25.000 | 212 | 139 | 5 | 201 | 411 | 47 | 239 | 1.53e-14 | 76.3 |
MS.gene52921.t1 | MTR_3g109090 | 24.542 | 273 | 163 | 5 | 26 | 262 | 45 | 310 | 2.64e-21 | 97.4 |
MS.gene52921.t1 | MTR_3g109090 | 29.121 | 182 | 109 | 5 | 201 | 381 | 45 | 207 | 1.51e-15 | 79.7 |
MS.gene52921.t1 | MTR_3g109090 | 24.542 | 273 | 163 | 5 | 26 | 262 | 61 | 326 | 3.21e-21 | 97.4 |
MS.gene52921.t1 | MTR_3g109090 | 29.121 | 182 | 109 | 5 | 201 | 381 | 61 | 223 | 1.63e-15 | 79.7 |
MS.gene52921.t1 | MTR_2g022950 | 26.217 | 267 | 166 | 9 | 23 | 263 | 58 | 319 | 7.97e-21 | 95.5 |
MS.gene52921.t1 | MTR_2g022950 | 22.727 | 286 | 202 | 6 | 115 | 388 | 62 | 340 | 1.46e-18 | 88.6 |
MS.gene52921.t1 | MTR_4g131970 | 25.940 | 266 | 167 | 7 | 23 | 263 | 72 | 332 | 9.04e-21 | 95.5 |
MS.gene52921.t1 | MTR_4g131970 | 23.860 | 285 | 199 | 8 | 115 | 388 | 76 | 353 | 1.96e-20 | 94.4 |
MS.gene52921.t1 | MTR_2g097960 | 23.810 | 315 | 185 | 9 | 13 | 283 | 8 | 311 | 1.40e-18 | 89.0 |
MS.gene52921.t1 | MTR_3g075500 | 32.512 | 203 | 120 | 6 | 186 | 385 | 100 | 288 | 6.60e-18 | 85.1 |
MS.gene52921.t1 | MTR_3g075500 | 28.947 | 190 | 113 | 4 | 23 | 196 | 107 | 290 | 3.49e-16 | 80.1 |
MS.gene52921.t1 | MTR_7g118120 | 24.542 | 273 | 182 | 7 | 25 | 285 | 104 | 364 | 5.71e-17 | 84.3 |
MS.gene52921.t1 | MTR_4g052940 | 27.686 | 242 | 159 | 6 | 25 | 258 | 110 | 343 | 2.20e-16 | 82.8 |
MS.gene52921.t1 | MTR_4g052940 | 20.739 | 352 | 219 | 8 | 113 | 455 | 110 | 410 | 7.95e-13 | 71.6 |
MS.gene52921.t1 | MTR_4g052940 | 27.686 | 242 | 159 | 6 | 25 | 258 | 110 | 343 | 8.75e-16 | 79.7 |
MS.gene52921.t1 | MTR_3g075500 | 32.796 | 186 | 108 | 6 | 186 | 368 | 100 | 271 | 1.09e-15 | 78.2 |
MS.gene52921.t1 | MTR_3g075500 | 29.825 | 171 | 98 | 4 | 23 | 177 | 107 | 271 | 3.02e-15 | 76.6 |
MS.gene52921.t1 | MTR_3g075500 | 31.677 | 161 | 99 | 4 | 113 | 262 | 109 | 269 | 4.67e-12 | 67.4 |
MS.gene52921.t1 | MTR_4g086600 | 22.776 | 281 | 169 | 6 | 26 | 263 | 117 | 392 | 1.38e-15 | 80.1 |
MS.gene52921.t1 | MTR_4g086600 | 26.087 | 207 | 143 | 4 | 202 | 405 | 118 | 317 | 3.41e-11 | 66.2 |
MS.gene52921.t1 | MTR_1g056520 | 27.322 | 183 | 119 | 4 | 27 | 196 | 110 | 291 | 4.58e-15 | 77.0 |
MS.gene52921.t1 | MTR_4g104470 | 30.108 | 186 | 117 | 4 | 202 | 385 | 124 | 298 | 6.86e-15 | 76.3 |
MS.gene52921.t1 | MTR_4g104470 | 28.729 | 181 | 120 | 3 | 23 | 195 | 120 | 299 | 9.75e-15 | 75.9 |
MS.gene52921.t1 | MTR_4g104470 | 30.682 | 176 | 113 | 5 | 115 | 282 | 124 | 298 | 6.61e-12 | 67.4 |
MS.gene52921.t1 | MTR_3g101370 | 26.316 | 190 | 130 | 6 | 12 | 192 | 80 | 268 | 7.52e-15 | 76.3 |
MS.gene52921.t1 | MTR_6g040200 | 43.689 | 103 | 33 | 3 | 448 | 550 | 5 | 82 | 9.08e-15 | 70.5 |
MS.gene52921.t1 | MTR_7g010360 | 25.887 | 282 | 192 | 7 | 25 | 298 | 350 | 622 | 3.49e-14 | 76.3 |
MS.gene52921.t1 | MTR_7g010360 | 21.534 | 339 | 227 | 10 | 113 | 444 | 350 | 656 | 6.31e-11 | 65.9 |
MS.gene52921.t1 | MTR_4g122650 | 28.571 | 210 | 127 | 7 | 199 | 404 | 87 | 277 | 4.59e-14 | 75.9 |
MS.gene52921.t1 | MTR_1g020080 | 25.140 | 179 | 123 | 5 | 23 | 192 | 95 | 271 | 5.59e-14 | 73.6 |
MS.gene52921.t1 | MTR_1g064230 | 29.744 | 195 | 110 | 5 | 115 | 283 | 86 | 279 | 5.98e-14 | 73.2 |
MS.gene52921.t1 | MTR_7g107580 | 26.736 | 288 | 158 | 13 | 202 | 473 | 18 | 268 | 2.19e-13 | 72.4 |
MS.gene52921.t1 | MTR_7g107580 | 26.736 | 288 | 158 | 13 | 202 | 473 | 18 | 268 | 4.84e-13 | 72.0 |
MS.gene52921.t1 | MTR_7g106440 | 26.154 | 195 | 123 | 5 | 19 | 197 | 108 | 297 | 5.35e-13 | 70.9 |
MS.gene52921.t1 | MTR_7g106440 | 27.513 | 189 | 115 | 5 | 202 | 379 | 111 | 288 | 1.79e-11 | 66.2 |
MS.gene52921.t1 | MTR_8g007390 | 22.134 | 253 | 178 | 6 | 27 | 268 | 216 | 460 | 5.38e-13 | 72.8 |
MS.gene52921.t1 | MTR_8g007390 | 22.134 | 253 | 178 | 6 | 27 | 268 | 217 | 461 | 5.77e-13 | 72.4 |
MS.gene52921.t1 | MTR_2g022950 | 26.012 | 173 | 119 | 5 | 23 | 186 | 58 | 230 | 5.79e-13 | 70.1 |
MS.gene52921.t1 | MTR_3g027140 | 26.163 | 172 | 113 | 4 | 27 | 185 | 62 | 232 | 1.00e-12 | 68.6 |
MS.gene52921.t1 | MTR_3g027140 | 30.049 | 203 | 128 | 7 | 177 | 372 | 34 | 229 | 9.20e-12 | 65.9 |
MS.gene52921.t1 | MTR_2g022950 | 26.012 | 173 | 119 | 5 | 23 | 186 | 58 | 230 | 4.05e-12 | 67.8 |
MS.gene52921.t1 | MTR_7g104800 | 25.000 | 256 | 162 | 9 | 25 | 264 | 101 | 342 | 4.79e-12 | 68.9 |
MS.gene52921.t1 | MTR_5g030020 | 32.065 | 184 | 114 | 5 | 201 | 382 | 97 | 271 | 5.99e-12 | 67.8 |
MS.gene52921.t1 | MTR_2g026180 | 31.694 | 183 | 103 | 9 | 115 | 279 | 6 | 184 | 8.49e-12 | 68.2 |
MS.gene52921.t1 | MTR_2g026180 | 25.287 | 174 | 121 | 4 | 202 | 369 | 6 | 176 | 4.65e-11 | 65.9 |
MS.gene52921.t1 | MTR_7g094660 | 32.804 | 189 | 108 | 8 | 115 | 288 | 643 | 827 | 8.84e-12 | 68.9 |
MS.gene52921.t1 | MTR_7g094660 | 28.692 | 237 | 140 | 9 | 176 | 394 | 609 | 834 | 7.67e-11 | 65.9 |
MS.gene52921.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 5 | 27 | 277 | 420 | 674 | 1.23e-11 | 68.6 |
MS.gene52921.t1 | MTR_7g107580 | 26.644 | 289 | 158 | 14 | 202 | 473 | 18 | 269 | 1.28e-11 | 67.4 |
MS.gene52921.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 5 | 27 | 277 | 420 | 674 | 1.45e-11 | 68.2 |
MS.gene52921.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 5 | 27 | 277 | 420 | 674 | 1.56e-11 | 68.2 |
MS.gene52921.t1 | MTR_7g099940 | 39.535 | 86 | 51 | 1 | 301 | 385 | 32 | 117 | 3.68e-11 | 61.6 |
MS.gene52921.t1 | MTR_5g097580 | 28.025 | 157 | 89 | 6 | 115 | 252 | 8 | 159 | 4.39e-11 | 65.9 |
MS.gene52921.t1 | MTR_5g097580 | 29.508 | 183 | 100 | 9 | 202 | 369 | 8 | 176 | 4.66e-11 | 65.9 |
MS.gene52921.t1 | MTR_3g084040 | 34.343 | 99 | 59 | 3 | 95 | 192 | 22 | 115 | 4.68e-11 | 61.6 |
MS.gene52921.t1 | MTR_5g097580 | 28.025 | 157 | 89 | 6 | 115 | 252 | 8 | 159 | 4.73e-11 | 65.9 |
MS.gene52921.t1 | MTR_5g097580 | 29.508 | 183 | 100 | 9 | 202 | 369 | 8 | 176 | 5.69e-11 | 65.5 |
MS.gene52921.t1 | MTR_3g055990 | 28.655 | 171 | 94 | 8 | 115 | 262 | 8 | 173 | 6.78e-11 | 65.5 |
MS.gene52921.t1 | MTR_3g055990 | 28.655 | 171 | 94 | 8 | 115 | 262 | 8 | 173 | 7.07e-11 | 65.5 |
MS.gene52921.t1 | MTR_1g045510 | 25.610 | 164 | 116 | 3 | 27 | 185 | 115 | 277 | 7.15e-11 | 63.9 |
MS.gene52921.t1 | MTR_7g013730 | 37.234 | 94 | 55 | 2 | 107 | 199 | 34 | 124 | 9.17e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52921.t1 | AT1G22760 | 53.167 | 600 | 262 | 8 | 24 | 607 | 48 | 644 | 0.0 | 605 |
MS.gene52921.t1 | AT1G71770 | 51.452 | 620 | 265 | 9 | 24 | 615 | 58 | 669 | 0.0 | 589 |
MS.gene52921.t1 | AT1G71770 | 51.452 | 620 | 265 | 9 | 24 | 615 | 58 | 669 | 0.0 | 589 |
MS.gene52921.t1 | AT4G34110 | 51.572 | 636 | 266 | 11 | 2 | 621 | 16 | 625 | 0.0 | 575 |
MS.gene52921.t1 | AT2G23350 | 49.674 | 614 | 272 | 12 | 25 | 618 | 46 | 642 | 0.0 | 541 |
MS.gene52921.t1 | AT1G49760 | 56.787 | 442 | 176 | 6 | 26 | 455 | 46 | 484 | 2.07e-168 | 496 |
MS.gene52921.t1 | AT1G49760 | 56.787 | 442 | 176 | 6 | 26 | 455 | 46 | 484 | 2.07e-168 | 496 |
MS.gene52921.t1 | AT2G36660 | 38.704 | 602 | 307 | 16 | 25 | 607 | 24 | 582 | 7.00e-116 | 358 |
MS.gene52921.t1 | AT1G34140 | 53.175 | 378 | 162 | 6 | 83 | 458 | 1 | 365 | 5.62e-115 | 349 |
MS.gene52921.t1 | AT1G34140 | 31.690 | 284 | 174 | 4 | 25 | 290 | 31 | 312 | 7.75e-38 | 145 |
MS.gene52921.t1 | AT3G16380 | 46.154 | 377 | 193 | 5 | 26 | 395 | 22 | 395 | 3.07e-102 | 321 |
MS.gene52921.t1 | AT3G16380 | 35.079 | 191 | 108 | 4 | 19 | 194 | 196 | 385 | 1.85e-23 | 105 |
MS.gene52921.t1 | AT3G16380 | 32.308 | 195 | 112 | 5 | 196 | 387 | 17 | 194 | 1.51e-20 | 95.9 |
MS.gene52921.t1 | AT2G18510 | 37.640 | 178 | 108 | 3 | 19 | 194 | 19 | 195 | 2.42e-33 | 131 |
MS.gene52921.t1 | AT2G18510 | 28.877 | 187 | 112 | 6 | 202 | 385 | 27 | 195 | 1.81e-14 | 75.9 |
MS.gene52921.t1 | AT1G54080 | 28.782 | 271 | 151 | 6 | 26 | 261 | 64 | 327 | 1.55e-27 | 116 |
MS.gene52921.t1 | AT1G54080 | 25.795 | 283 | 182 | 8 | 105 | 367 | 55 | 329 | 5.85e-17 | 84.0 |
MS.gene52921.t1 | AT1G54080 | 26.923 | 182 | 113 | 5 | 201 | 381 | 64 | 226 | 2.38e-13 | 72.8 |
MS.gene52921.t1 | AT1G54080 | 28.727 | 275 | 150 | 7 | 26 | 261 | 64 | 331 | 5.30e-26 | 111 |
MS.gene52921.t1 | AT1G54080 | 25.436 | 287 | 182 | 8 | 105 | 367 | 55 | 333 | 3.18e-16 | 82.0 |
MS.gene52921.t1 | AT1G54080 | 26.882 | 186 | 112 | 6 | 201 | 381 | 64 | 230 | 5.09e-12 | 68.9 |
MS.gene52921.t1 | AT3G14100 | 26.568 | 271 | 157 | 5 | 26 | 261 | 60 | 323 | 6.32e-24 | 105 |
MS.gene52921.t1 | AT3G14100 | 26.296 | 270 | 167 | 9 | 114 | 361 | 60 | 319 | 8.43e-17 | 83.6 |
MS.gene52921.t1 | AT3G14100 | 28.022 | 182 | 111 | 5 | 201 | 381 | 60 | 222 | 1.16e-14 | 77.0 |
MS.gene52921.t1 | AT1G47490 | 29.740 | 269 | 156 | 9 | 23 | 263 | 99 | 362 | 2.87e-23 | 103 |
MS.gene52921.t1 | AT1G47490 | 24.773 | 331 | 213 | 12 | 115 | 431 | 103 | 411 | 1.23e-20 | 95.5 |
MS.gene52921.t1 | AT1G47500 | 29.259 | 270 | 158 | 9 | 23 | 264 | 101 | 365 | 4.67e-23 | 102 |
MS.gene52921.t1 | AT1G47500 | 24.471 | 331 | 214 | 12 | 115 | 431 | 105 | 413 | 1.61e-19 | 92.0 |
MS.gene52921.t1 | AT3G19130 | 27.703 | 296 | 170 | 9 | 26 | 282 | 109 | 399 | 7.65e-22 | 99.0 |
MS.gene52921.t1 | AT3G19130 | 25.949 | 316 | 184 | 12 | 115 | 394 | 110 | 411 | 2.37e-18 | 88.6 |
MS.gene52921.t1 | AT3G19130 | 26.190 | 210 | 141 | 5 | 202 | 408 | 110 | 308 | 7.57e-11 | 65.1 |
MS.gene52921.t1 | AT1G17370 | 25.725 | 276 | 166 | 6 | 26 | 269 | 55 | 323 | 2.26e-21 | 97.4 |
MS.gene52921.t1 | AT1G17370 | 25.279 | 269 | 176 | 8 | 114 | 365 | 55 | 315 | 2.86e-16 | 82.0 |
MS.gene52921.t1 | AT1G17370 | 26.923 | 182 | 113 | 5 | 201 | 381 | 55 | 217 | 2.25e-12 | 69.7 |
MS.gene52921.t1 | AT1G49600 | 27.759 | 299 | 177 | 9 | 18 | 282 | 112 | 405 | 2.46e-21 | 97.8 |
MS.gene52921.t1 | AT1G17370 | 25.448 | 279 | 166 | 6 | 26 | 269 | 55 | 326 | 4.57e-21 | 96.7 |
MS.gene52921.t1 | AT1G17370 | 25.735 | 272 | 174 | 9 | 114 | 365 | 55 | 318 | 1.31e-15 | 79.7 |
MS.gene52921.t1 | AT1G17370 | 26.923 | 182 | 113 | 5 | 201 | 381 | 55 | 217 | 2.12e-12 | 70.1 |
MS.gene52921.t1 | AT1G49600 | 27.667 | 300 | 178 | 9 | 18 | 283 | 112 | 406 | 6.51e-21 | 96.7 |
MS.gene52921.t1 | AT1G49600 | 26.129 | 310 | 188 | 10 | 115 | 399 | 121 | 414 | 1.06e-18 | 89.7 |
MS.gene52921.t1 | AT1G49600 | 27.667 | 300 | 178 | 9 | 18 | 283 | 112 | 406 | 6.51e-21 | 96.7 |
MS.gene52921.t1 | AT1G49600 | 26.129 | 310 | 188 | 10 | 115 | 399 | 121 | 414 | 1.06e-18 | 89.7 |
MS.gene52921.t1 | AT5G54900 | 22.997 | 287 | 190 | 7 | 26 | 286 | 61 | 342 | 1.11e-18 | 89.0 |
MS.gene52921.t1 | AT5G54900 | 23.906 | 297 | 190 | 10 | 114 | 390 | 61 | 341 | 1.50e-18 | 88.6 |
MS.gene52921.t1 | AT5G19350 | 23.103 | 290 | 194 | 8 | 114 | 380 | 25 | 308 | 1.58e-18 | 89.0 |
MS.gene52921.t1 | AT5G19350 | 24.373 | 279 | 166 | 7 | 23 | 262 | 22 | 294 | 1.30e-16 | 83.2 |
MS.gene52921.t1 | AT2G37220 | 29.032 | 186 | 104 | 3 | 27 | 185 | 93 | 277 | 2.53e-18 | 86.3 |
MS.gene52921.t1 | AT1G11650 | 24.286 | 280 | 181 | 8 | 8 | 262 | 45 | 318 | 3.68e-18 | 87.4 |
MS.gene52921.t1 | AT1G11650 | 21.799 | 289 | 211 | 5 | 114 | 393 | 63 | 345 | 3.07e-15 | 78.6 |
MS.gene52921.t1 | AT4G27000 | 24.830 | 294 | 185 | 10 | 114 | 388 | 81 | 357 | 3.95e-18 | 87.4 |
MS.gene52921.t1 | AT4G27000 | 23.684 | 266 | 165 | 8 | 26 | 263 | 81 | 336 | 4.15e-16 | 81.3 |
MS.gene52921.t1 | AT4G24770 | 31.016 | 187 | 116 | 4 | 202 | 386 | 152 | 327 | 5.08e-18 | 86.3 |
MS.gene52921.t1 | AT4G24770 | 30.556 | 180 | 116 | 3 | 23 | 194 | 148 | 326 | 1.83e-16 | 81.6 |
MS.gene52921.t1 | AT4G24770 | 31.016 | 187 | 116 | 4 | 202 | 386 | 152 | 327 | 5.08e-18 | 86.3 |
MS.gene52921.t1 | AT4G24770 | 30.556 | 180 | 116 | 3 | 23 | 194 | 148 | 326 | 1.83e-16 | 81.6 |
MS.gene52921.t1 | AT5G50250 | 30.000 | 180 | 117 | 3 | 23 | 194 | 111 | 289 | 1.09e-17 | 84.3 |
MS.gene52921.t1 | AT5G50250 | 29.319 | 191 | 122 | 4 | 197 | 385 | 110 | 289 | 8.14e-16 | 79.0 |
MS.gene52921.t1 | AT5G50250 | 30.337 | 178 | 115 | 4 | 113 | 282 | 113 | 289 | 1.49e-14 | 75.1 |
MS.gene52921.t1 | AT5G19350 | 23.358 | 274 | 171 | 6 | 23 | 262 | 22 | 290 | 4.40e-17 | 84.3 |
MS.gene52921.t1 | AT5G41690 | 19.283 | 446 | 267 | 10 | 26 | 380 | 69 | 512 | 3.20e-16 | 82.4 |
MS.gene52921.t1 | AT5G41690 | 19.283 | 446 | 267 | 10 | 26 | 380 | 69 | 512 | 3.20e-16 | 82.4 |
MS.gene52921.t1 | AT5G41690 | 19.283 | 446 | 267 | 10 | 26 | 380 | 69 | 512 | 3.20e-16 | 82.4 |
MS.gene52921.t1 | AT1G11650 | 23.774 | 265 | 171 | 8 | 8 | 247 | 45 | 303 | 5.04e-16 | 79.7 |
MS.gene52921.t1 | AT1G11650 | 22.581 | 248 | 177 | 5 | 114 | 352 | 63 | 304 | 1.74e-12 | 69.3 |
MS.gene52921.t1 | AT2G35410 | 28.042 | 189 | 115 | 4 | 202 | 381 | 97 | 273 | 1.59e-15 | 78.2 |
MS.gene52921.t1 | AT2G35410 | 28.834 | 163 | 100 | 3 | 115 | 262 | 97 | 258 | 9.97e-14 | 72.8 |
MS.gene52921.t1 | AT3G52150 | 33.143 | 175 | 108 | 6 | 202 | 372 | 78 | 247 | 4.28e-15 | 75.9 |
MS.gene52921.t1 | AT3G52150 | 26.702 | 191 | 117 | 5 | 13 | 185 | 65 | 250 | 3.05e-13 | 70.5 |
MS.gene52921.t1 | AT3G52150 | 33.143 | 175 | 108 | 6 | 202 | 372 | 78 | 247 | 4.28e-15 | 75.9 |
MS.gene52921.t1 | AT3G52150 | 26.702 | 191 | 117 | 5 | 13 | 185 | 65 | 250 | 3.05e-13 | 70.5 |
MS.gene52921.t1 | AT1G01080 | 32.124 | 193 | 111 | 7 | 107 | 281 | 102 | 292 | 4.67e-15 | 76.6 |
MS.gene52921.t1 | AT1G45100 | 21.410 | 383 | 258 | 10 | 24 | 368 | 63 | 440 | 1.38e-14 | 77.0 |
MS.gene52921.t1 | AT1G45100 | 25.763 | 295 | 164 | 7 | 22 | 267 | 155 | 443 | 6.93e-13 | 71.6 |
MS.gene52921.t1 | AT1G01080 | 31.959 | 194 | 111 | 7 | 107 | 281 | 102 | 293 | 1.67e-14 | 75.1 |
MS.gene52921.t1 | AT4G00830 | 25.746 | 268 | 180 | 7 | 25 | 283 | 116 | 373 | 3.07e-14 | 75.9 |
MS.gene52921.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 1.81e-13 | 73.6 |
MS.gene52921.t1 | AT4G00830 | 25.746 | 268 | 180 | 7 | 25 | 283 | 116 | 373 | 3.07e-14 | 75.9 |
MS.gene52921.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 1.81e-13 | 73.6 |
MS.gene52921.t1 | AT4G00830 | 25.746 | 268 | 180 | 7 | 25 | 283 | 116 | 373 | 3.07e-14 | 75.9 |
MS.gene52921.t1 | AT4G00830 | 23.297 | 279 | 188 | 6 | 113 | 386 | 116 | 373 | 1.81e-13 | 73.6 |
MS.gene52921.t1 | AT3G52380 | 24.599 | 187 | 125 | 3 | 23 | 193 | 114 | 300 | 4.86e-14 | 74.3 |
MS.gene52921.t1 | AT3G52380 | 28.704 | 216 | 129 | 7 | 115 | 311 | 118 | 327 | 6.84e-12 | 67.8 |
MS.gene52921.t1 | AT1G60000 | 27.381 | 168 | 115 | 3 | 24 | 185 | 84 | 250 | 6.70e-14 | 72.8 |
MS.gene52921.t1 | AT1G60000 | 29.240 | 171 | 114 | 4 | 115 | 279 | 87 | 256 | 1.15e-11 | 65.9 |
MS.gene52921.t1 | AT1G47500 | 26.702 | 191 | 123 | 7 | 23 | 203 | 101 | 284 | 9.83e-14 | 73.2 |
MS.gene52921.t1 | AT4G00830 | 25.373 | 268 | 173 | 7 | 25 | 283 | 116 | 365 | 1.61e-13 | 73.9 |
MS.gene52921.t1 | AT4G00830 | 23.188 | 276 | 184 | 6 | 113 | 386 | 116 | 365 | 8.47e-13 | 71.6 |
MS.gene52921.t1 | AT4G00830 | 25.373 | 268 | 173 | 7 | 25 | 283 | 116 | 365 | 1.61e-13 | 73.9 |
MS.gene52921.t1 | AT4G00830 | 23.188 | 276 | 184 | 6 | 113 | 386 | 116 | 365 | 8.47e-13 | 71.6 |
MS.gene52921.t1 | AT1G01080 | 30.682 | 176 | 103 | 5 | 107 | 264 | 102 | 276 | 1.69e-13 | 72.0 |
MS.gene52921.t1 | AT5G03580 | 37.037 | 81 | 51 | 0 | 304 | 384 | 17 | 97 | 4.16e-13 | 66.2 |
MS.gene52921.t1 | AT3G07810 | 32.787 | 183 | 101 | 8 | 115 | 279 | 8 | 186 | 1.70e-12 | 70.5 |
MS.gene52921.t1 | AT3G07810 | 32.787 | 183 | 101 | 8 | 115 | 279 | 8 | 186 | 1.95e-12 | 70.5 |
MS.gene52921.t1 | AT2G44710 | 21.654 | 254 | 180 | 6 | 27 | 269 | 131 | 376 | 2.92e-12 | 70.1 |
MS.gene52921.t1 | AT2G44710 | 21.654 | 254 | 180 | 6 | 27 | 269 | 216 | 461 | 3.05e-12 | 70.5 |
MS.gene52921.t1 | AT2G44710 | 21.654 | 254 | 180 | 6 | 27 | 269 | 216 | 461 | 3.05e-12 | 70.5 |
MS.gene52921.t1 | AT5G47620 | 29.825 | 171 | 92 | 8 | 115 | 262 | 8 | 173 | 3.32e-12 | 69.3 |
MS.gene52921.t1 | AT5G47620 | 29.825 | 171 | 92 | 8 | 115 | 262 | 8 | 173 | 3.32e-12 | 69.3 |
MS.gene52921.t1 | AT5G47620 | 29.825 | 171 | 92 | 8 | 115 | 262 | 8 | 173 | 3.32e-12 | 69.3 |
MS.gene52921.t1 | AT4G36960 | 32.558 | 172 | 105 | 6 | 115 | 281 | 5 | 170 | 3.51e-12 | 68.9 |
MS.gene52921.t1 | AT4G36960 | 32.558 | 172 | 105 | 6 | 115 | 281 | 5 | 170 | 3.51e-12 | 68.9 |
MS.gene52921.t1 | AT4G00830 | 23.214 | 280 | 187 | 7 | 113 | 386 | 116 | 373 | 3.64e-12 | 69.3 |
MS.gene52921.t1 | AT4G16280 | 26.606 | 218 | 138 | 6 | 175 | 388 | 99 | 298 | 5.52e-12 | 68.9 |
MS.gene52921.t1 | AT4G16280 | 25.510 | 196 | 140 | 3 | 115 | 304 | 122 | 317 | 9.48e-12 | 68.2 |
MS.gene52921.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 1.64e-11 | 67.4 |
MS.gene52921.t1 | AT4G16280 | 26.606 | 218 | 138 | 6 | 175 | 388 | 99 | 298 | 9.37e-12 | 68.6 |
MS.gene52921.t1 | AT4G16280 | 25.510 | 196 | 140 | 3 | 115 | 304 | 122 | 317 | 1.38e-11 | 68.2 |
MS.gene52921.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 2.09e-11 | 67.4 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 9.89e-12 | 67.8 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 9.89e-12 | 67.8 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 9.89e-12 | 67.8 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 9.89e-12 | 67.8 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 9.89e-12 | 67.8 |
MS.gene52921.t1 | AT4G16280 | 26.606 | 218 | 138 | 6 | 175 | 388 | 24 | 223 | 1.34e-11 | 68.2 |
MS.gene52921.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 41 | 198 | 1.65e-11 | 67.8 |
MS.gene52921.t1 | AT4G16280 | 24.752 | 202 | 146 | 3 | 109 | 304 | 41 | 242 | 1.74e-11 | 67.8 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 1.64e-11 | 67.4 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 1.64e-11 | 67.4 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 1.64e-11 | 67.4 |
MS.gene52921.t1 | AT5G55550 | 29.688 | 192 | 97 | 9 | 115 | 279 | 8 | 188 | 1.64e-11 | 67.4 |
MS.gene52921.t1 | AT2G47310 | 25.888 | 197 | 134 | 4 | 202 | 394 | 112 | 300 | 3.08e-11 | 66.6 |
MS.gene52921.t1 | AT3G52660 | 23.482 | 247 | 165 | 6 | 25 | 258 | 92 | 327 | 8.61e-11 | 65.1 |
MS.gene52921.t1 | AT3G52660 | 23.482 | 247 | 165 | 6 | 25 | 258 | 92 | 327 | 8.61e-11 | 65.1 |
MS.gene52921.t1 | AT3G52660 | 23.482 | 247 | 165 | 6 | 25 | 258 | 92 | 327 | 8.61e-11 | 65.1 |
Find 141 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACGAATGGGCTTTCCATTC+AGG | 0.215326 | 6.1:+22288547 | None:intergenic |
TGATATGGCGGCAAGTAATT+TGG | 0.257803 | 6.1:+22286930 | None:intergenic |
TTTGCTTGTGTCTCACTTGC+TGG | 0.279263 | 6.1:+22286850 | None:intergenic |
CCATGCCTTTGAAGGTGATA+TGG | 0.282817 | 6.1:+22286915 | None:intergenic |
AATGGGAACTCTAAATGTTT+TGG | 0.284735 | 6.1:-22288111 | MS.gene52921:CDS |
CTTCAAAGGCATGGAAATCT+AGG | 0.285529 | 6.1:-22286906 | MS.gene52921:CDS |
GATCCTCTCATTCGGAAAAC+TGG | 0.296987 | 6.1:-22288507 | MS.gene52921:CDS |
AATGGTCAATCTAGGGGATT+TGG | 0.306755 | 6.1:-22288372 | MS.gene52921:CDS |
TGGATCCATCATTTGACTTC+CGG | 0.307120 | 6.1:+22286660 | None:intergenic |
TGGACATGTGCTTTCTTGTA+AGG | 0.312279 | 6.1:-22288409 | MS.gene52921:CDS |
TCTAAATACAATGGTCAAAA+TGG | 0.321666 | 6.1:-22286703 | MS.gene52921:CDS |
TGGTTTCTGTTAGGATTTGC+AGG | 0.322189 | 6.1:-22290050 | MS.gene52921:CDS |
CAGAAACCACTGGAGCAATT+TGG | 0.329438 | 6.1:+22290064 | None:intergenic |
CCCGCGGCTTTGACCGGTGC+TGG | 0.332096 | 6.1:-22290165 | MS.gene52921:CDS |
CTAGATTTCCATGCCTTTGA+AGG | 0.333551 | 6.1:+22286907 | None:intergenic |
TTGGGCCACAGAAACATATA+AGG | 0.339551 | 6.1:+22287444 | None:intergenic |
TTGTATTTAGACCCTTTGTT+CGG | 0.342341 | 6.1:+22286715 | None:intergenic |
TTGTATGTTGGTGATCTAGA+AGG | 0.354376 | 6.1:-22290123 | MS.gene52921:CDS |
GGATCCATCATTTGACTTCC+GGG | 0.355706 | 6.1:+22286661 | None:intergenic |
TTGCTCCAGTGGTTTCTGTT+AGG | 0.357998 | 6.1:-22290059 | MS.gene52921:CDS |
GCCGCGGGAACAACGATCTT+TGG | 0.363060 | 6.1:+22290180 | None:intergenic |
TGTCACCTTTGCAGTCTGAT+TGG | 0.366895 | 6.1:+22286388 | None:intergenic |
TTGAACTATGTTACCCTGAA+TGG | 0.377536 | 6.1:-22288561 | MS.gene52921:CDS |
TGGATAGCAATGGTCAATCT+AGG | 0.378409 | 6.1:-22288380 | MS.gene52921:CDS |
TATTATGCGCAAGGTACATT+TGG | 0.391782 | 6.1:-22287029 | MS.gene52921:CDS |
CAAGTCGCTTGCTTCAGCTT+TGG | 0.396191 | 6.1:-22286584 | MS.gene52921:CDS |
GGAAGAACATTTGTTTCCTC+TGG | 0.397046 | 6.1:-22286429 | MS.gene52921:CDS |
ACCTTCATCTTCAGCTCCTC+AGG | 0.401679 | 6.1:+22286314 | None:intergenic |
CTCATCGAGATCCTCTCATT+CGG | 0.404413 | 6.1:-22288515 | MS.gene52921:CDS |
TGTATTTAGACCCTTTGTTC+GGG | 0.408784 | 6.1:+22286716 | None:intergenic |
ACACAGTCATCTCTTCGTTA+TGG | 0.411939 | 6.1:-22290018 | MS.gene52921:CDS |
CTTTCCTGTCCTCTTTGCGT+TGG | 0.419707 | 6.1:+22287425 | None:intergenic |
TTTCCTGTCCTCTTTGCGTT+GGG | 0.420351 | 6.1:+22287426 | None:intergenic |
GACAAGAATGTTGCTTGAAA+TGG | 0.427526 | 6.1:-22286369 | MS.gene52921:CDS |
ACGAATGGGCTTTCCATTCA+GGG | 0.428554 | 6.1:+22288548 | None:intergenic |
GAAATGAATGGGAAGATGAT+TGG | 0.438745 | 6.1:-22287475 | MS.gene52921:CDS |
GTTGTTCCCGCGGCTTTGAC+CGG | 0.440477 | 6.1:-22290171 | MS.gene52921:CDS |
TTCATGTCAGGTGTGGGAAC+TGG | 0.440482 | 6.1:-22286963 | MS.gene52921:CDS |
GGACAGGAAAGCTCAATTGC+AGG | 0.441542 | 6.1:-22287413 | MS.gene52921:intron |
ACCTTTGCAGTCTGATTGGT+TGG | 0.441633 | 6.1:+22286392 | None:intergenic |
TTTAGATCAATGAAATGAAT+GGG | 0.452453 | 6.1:-22287486 | MS.gene52921:intron |
CACCTGACATGAACTGTGGC+TGG | 0.456062 | 6.1:+22286973 | None:intergenic |
TGATGCTCGTGGCCGCAGCA+AGG | 0.460666 | 6.1:-22287636 | MS.gene52921:CDS |
GACCCTTTGTTCGGGTTATG+AGG | 0.462045 | 6.1:+22286724 | None:intergenic |
ACATACACATTTGTGAACTT+AGG | 0.463325 | 6.1:+22288228 | None:intergenic |
TAGCTGCTGAATCTGAGCTT+TGG | 0.466989 | 6.1:+22288076 | None:intergenic |
TTCCAGCCACAGTTCATGTC+AGG | 0.467171 | 6.1:-22286975 | MS.gene52921:CDS |
GGCATGGAAATCTAGGGAAT+AGG | 0.475187 | 6.1:-22286899 | MS.gene52921:CDS |
GCTTTCTTGTAAGGTTGCTA+TGG | 0.481734 | 6.1:-22288400 | MS.gene52921:CDS |
ATTCAAGTATTGGGAAATGC+TGG | 0.483025 | 6.1:-22287092 | MS.gene52921:CDS |
AATGGGAGCACAACTAATGA+TGG | 0.484741 | 6.1:-22288036 | MS.gene52921:CDS |
AATGATAAGAAAGTTTATGT+AGG | 0.485281 | 6.1:-22288282 | MS.gene52921:CDS |
TACTCAAGAAAATCAACATC+GGG | 0.486689 | 6.1:-22286554 | MS.gene52921:intron |
GATGCTCGTGGCCGCAGCAA+GGG | 0.490321 | 6.1:-22287635 | MS.gene52921:CDS |
GGCTGGAAACCGTATCCGTC+TGG | 0.491941 | 6.1:+22286990 | None:intergenic |
GGATAGCAATGGTCAATCTA+GGG | 0.497370 | 6.1:-22288379 | MS.gene52921:CDS |
GTGATAATGAAACATGAGAA+TGG | 0.507258 | 6.1:-22288129 | MS.gene52921:CDS |
AAGTGTTGAAAAGCTGCTTA+AGG | 0.508202 | 6.1:+22288172 | None:intergenic |
TGAGAAAACATAATACGAAT+GGG | 0.509410 | 6.1:+22288534 | None:intergenic |
CCTGCAGTTGGTGATCAGAT+TGG | 0.512215 | 6.1:-22286251 | MS.gene52921:CDS |
CGTGGCCGCAGCAAGGGCGT+CGG | 0.514938 | 6.1:-22287629 | MS.gene52921:CDS |
CATCAGTATATGATTCAGAA+AGG | 0.518661 | 6.1:+22288199 | None:intergenic |
GAACATTTGTTTCCTCTGGT+CGG | 0.519158 | 6.1:-22286425 | MS.gene52921:CDS |
ATGAGAAAACATAATACGAA+TGG | 0.522254 | 6.1:+22288533 | None:intergenic |
ATCTAGGGAATAGGATGGGT+GGG | 0.525142 | 6.1:-22286890 | MS.gene52921:CDS |
ATGATAAGAAAGTTTATGTA+GGG | 0.526737 | 6.1:-22288281 | MS.gene52921:CDS |
CCAGCACCGGTCAAAGCCGC+GGG | 0.526775 | 6.1:+22290165 | None:intergenic |
ACGGCTTTACTCGCTTCCTC+AGG | 0.529364 | 6.1:+22287587 | None:intergenic |
TCGCCTCAGCCAGACGGATA+CGG | 0.530016 | 6.1:-22286999 | MS.gene52921:CDS |
ACCATGATGGTTATTGTCAA+TGG | 0.530651 | 6.1:+22286618 | None:intergenic |
TGATAATGAAACATGAGAAT+GGG | 0.532657 | 6.1:-22288128 | MS.gene52921:CDS |
ACTGCTGTTGAGAAGTTGAA+TGG | 0.534617 | 6.1:-22288054 | MS.gene52921:CDS |
AAAAGATATGAGAAATTACA+AGG | 0.535183 | 6.1:-22287931 | MS.gene52921:CDS |
CTGCTGTTGAGAAGTTGAAT+GGG | 0.541657 | 6.1:-22288053 | MS.gene52921:CDS |
TGGCCCAACGCAAAGAGGAC+AGG | 0.543729 | 6.1:-22287429 | MS.gene52921:CDS |
TTCTAGATCACCAACATACA+AGG | 0.543787 | 6.1:+22290125 | None:intergenic |
ACTTGCTGGAAATTACCATC+TGG | 0.544952 | 6.1:+22286864 | None:intergenic |
CCATATCACCTTCAAAGGCA+TGG | 0.545282 | 6.1:-22286915 | MS.gene52921:CDS |
TCCAGCACCGGTCAAAGCCG+CGG | 0.549669 | 6.1:+22290164 | None:intergenic |
GTTTAGCCAAATTGCTCCAG+TGG | 0.550076 | 6.1:-22290070 | MS.gene52921:CDS |
GACCTCATAACCCGAACAAA+GGG | 0.552871 | 6.1:-22286726 | MS.gene52921:CDS |
GGTTTCTGTTAGGATTTGCA+GGG | 0.556788 | 6.1:-22290049 | MS.gene52921:CDS |
ACCAAAGATCGTTGTTCCCG+CGG | 0.558390 | 6.1:-22290181 | MS.gene52921:CDS |
TGCCGCCATATCACCTTCAA+AGG | 0.559692 | 6.1:-22286920 | MS.gene52921:CDS |
AACTTCTCAAACGCTCGTGA+TGG | 0.560289 | 6.1:-22289988 | MS.gene52921:intron |
TACTGCAGCTGCTAATGCGA+TGG | 0.562006 | 6.1:-22288589 | MS.gene52921:intron |
TACAATGGTCAAAATGGCGT+GGG | 0.564110 | 6.1:-22286697 | MS.gene52921:CDS |
ACCTGAGGAGCTGAAGATGA+AGG | 0.565275 | 6.1:-22286315 | MS.gene52921:CDS |
CCTCAGGTGACTCAATCAGA+TGG | 0.568290 | 6.1:+22286330 | None:intergenic |
GCCACAGTTCATGTCAGGTG+TGG | 0.569110 | 6.1:-22286970 | MS.gene52921:CDS |
CAAAACCGACGCCCTTGCTG+CGG | 0.572202 | 6.1:+22287624 | None:intergenic |
AAACCGTATCCGTCTGGCTG+AGG | 0.574548 | 6.1:+22286996 | None:intergenic |
TGGAACAATAACATCTTGCA+AGG | 0.575684 | 6.1:-22287836 | MS.gene52921:intron |
TTCAAAGGCATGGAAATCTA+GGG | 0.577027 | 6.1:-22286905 | MS.gene52921:CDS |
GTGGGTATGTCTGTAGATCC+CGG | 0.577216 | 6.1:-22286679 | MS.gene52921:CDS |
AGGATGGGTGGGCGTCCAGA+TGG | 0.578293 | 6.1:-22286879 | MS.gene52921:CDS |
TCCATTGACAATAACCATCA+TGG | 0.578816 | 6.1:-22286619 | MS.gene52921:CDS |
CTACTCAAGAAAATCAACAT+CGG | 0.581357 | 6.1:-22286555 | MS.gene52921:CDS |
TGCGCATAATAAAATTGTTG+CGG | 0.582174 | 6.1:+22287041 | None:intergenic |
AGATCCCGGAAGTCAAATGA+TGG | 0.582698 | 6.1:-22286665 | MS.gene52921:CDS |
TGTATGTTGGTGATCTAGAA+GGG | 0.584535 | 6.1:-22290122 | MS.gene52921:CDS |
GAGGTTGTAGCACTTGCAGA+TGG | 0.586843 | 6.1:+22286640 | None:intergenic |
GTTCTCAAATCTTCCAGCAC+CGG | 0.587827 | 6.1:+22290152 | None:intergenic |
CTCATGTCGCCTCAGCCAGA+CGG | 0.588715 | 6.1:-22287005 | MS.gene52921:CDS |
TTCCTTCGTGAAGCTTCACA+AGG | 0.588860 | 6.1:-22286275 | MS.gene52921:CDS |
CCAATCTGATCACCAACTGC+AGG | 0.592064 | 6.1:+22286251 | None:intergenic |
GCTTCACAAGGTCCTGCAGT+TGG | 0.593166 | 6.1:-22286263 | MS.gene52921:CDS |
TGTTAGACAATGGACCATGA+TGG | 0.593339 | 6.1:+22286605 | None:intergenic |
TGGGCCACAGAAACATATAA+GGG | 0.593978 | 6.1:+22287445 | None:intergenic |
CGACCTCATAACCCGAACAA+AGG | 0.594003 | 6.1:-22286727 | MS.gene52921:CDS |
ATACAATGGTCAAAATGGCG+TGG | 0.599872 | 6.1:-22286698 | MS.gene52921:CDS |
CAAATCCTAACAGAAACCAC+TGG | 0.602361 | 6.1:+22290054 | None:intergenic |
TTTACTCGCTTCCTCAGGTG+TGG | 0.602529 | 6.1:+22287592 | None:intergenic |
TGGAAATCTAGGGAATAGGA+TGG | 0.610492 | 6.1:-22286895 | MS.gene52921:CDS |
GAAGCCCTTATATGTTTCTG+TGG | 0.610500 | 6.1:-22287449 | MS.gene52921:CDS |
GAGAACGCTTCCTTGTATGT+TGG | 0.613918 | 6.1:-22290135 | MS.gene52921:CDS |
TTCTGAATCATATACTGATG+AGG | 0.614844 | 6.1:-22288196 | MS.gene52921:CDS |
GTTGCTTGAAATGGACCAGT+CGG | 0.620223 | 6.1:-22286360 | MS.gene52921:CDS |
TCAGATGGATGACCTCCGAC+TGG | 0.623553 | 6.1:+22286345 | None:intergenic |
TTCTGTGGCCCAACGCAAAG+AGG | 0.624780 | 6.1:-22287434 | MS.gene52921:CDS |
CCACAGTTCATGTCAGGTGT+GGG | 0.624896 | 6.1:-22286969 | MS.gene52921:CDS |
ATGGGAGCACAACTAATGAT+GGG | 0.625227 | 6.1:-22288035 | MS.gene52921:CDS |
AATCTAGGGAATAGGATGGG+TGG | 0.626543 | 6.1:-22286891 | MS.gene52921:CDS |
GAGCACAACTAATGATGGGA+AGG | 0.632165 | 6.1:-22288031 | MS.gene52921:CDS |
AACAAAGGGTCTAAATACAA+TGG | 0.632983 | 6.1:-22286712 | MS.gene52921:CDS |
CAGGTAATGTCTGATGCTCG+TGG | 0.638564 | 6.1:-22287647 | MS.gene52921:CDS |
AGAAACATCAATAGATAACA+AGG | 0.638852 | 6.1:-22288457 | MS.gene52921:CDS |
TGCCTTTGAAGGTGATATGG+CGG | 0.646991 | 6.1:+22286918 | None:intergenic |
GATAGCAATGGTCAATCTAG+GGG | 0.648957 | 6.1:-22288378 | MS.gene52921:CDS |
AAGGTTGCTATGGATAGCAA+TGG | 0.649706 | 6.1:-22288390 | MS.gene52921:CDS |
GCTTGAAATGGACCAGTCGG+AGG | 0.651459 | 6.1:-22286357 | MS.gene52921:CDS |
GGAAATCTAGGGAATAGGAT+GGG | 0.668794 | 6.1:-22286894 | MS.gene52921:CDS |
ATGATGGTTATTGTCAATGG+AGG | 0.669928 | 6.1:+22286621 | None:intergenic |
GCAAGCGACTTGTTAGACAA+TGG | 0.670626 | 6.1:+22286595 | None:intergenic |
CCATCTGATTGAGTCACCTG+AGG | 0.674252 | 6.1:-22286330 | MS.gene52921:CDS |
ACCAACCAATCAGACTGCAA+AGG | 0.679325 | 6.1:-22286393 | MS.gene52921:CDS |
GACCTTGTGAAGCTTCACGA+AGG | 0.694693 | 6.1:+22286273 | None:intergenic |
TGAAGGTGTCTGAAGCGATG+CGG | 0.701614 | 6.1:-22286298 | MS.gene52921:CDS |
GGTGTAAGACAACCGACCAG+AGG | 0.703793 | 6.1:+22286413 | None:intergenic |
AAAGATATGAGAAATTACAA+GGG | 0.704417 | 6.1:-22287930 | MS.gene52921:CDS |
CCCACACCTGACATGAACTG+TGG | 0.725165 | 6.1:+22286969 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAACATAATTTAATTACT+GGG | + | chr6.1:22287081-22287100 | None:intergenic | 10.0% |
!! | AACAAAAAAAAATTTCAATA+AGG | + | chr6.1:22286581-22286600 | None:intergenic | 10.0% |
!! | TAAAAACATAATTTAATTAC+TGG | + | chr6.1:22287082-22287101 | None:intergenic | 10.0% |
!!! | ATTTTTTTAATTAAATACGT+GGG | - | chr6.1:22287568-22287587 | MS.gene52921:intron | 10.0% |
!!! | GAATAATAACATTTAAAATT+GGG | + | chr6.1:22287154-22287173 | None:intergenic | 10.0% |
!!! | TATTGAAATTTTTTTTTGTT+TGG | - | chr6.1:22286581-22286600 | MS.gene52921:CDS | 10.0% |
!!! | TATTTTTTTAATTAAATACG+TGG | - | chr6.1:22287567-22287586 | MS.gene52921:intron | 10.0% |
!!! | TGAATAATAACATTTAAAAT+TGG | + | chr6.1:22287155-22287174 | None:intergenic | 10.0% |
!! | AAAACATAATTTAATTACTG+GGG | + | chr6.1:22287080-22287099 | None:intergenic | 15.0% |
!! | AAAACATGATTATAAATACT+AGG | + | chr6.1:22286718-22286737 | None:intergenic | 15.0% |
!! | AAACATGATTATAAATACTA+GGG | + | chr6.1:22286717-22286736 | None:intergenic | 15.0% |
!! | AACAAAAAAACTTAGATTTA+TGG | + | chr6.1:22289635-22289654 | None:intergenic | 15.0% |
!! | TATTCAATTACAATTTGATT+TGG | - | chr6.1:22289116-22289135 | MS.gene52921:intron | 15.0% |
!! | TTATCCATAATATCATTATA+AGG | + | chr6.1:22289090-22289109 | None:intergenic | 15.0% |
!!! | TATATATTATAGTAGTTTTG+AGG | - | chr6.1:22287665-22287684 | MS.gene52921:intron | 15.0% |
!!! | TTTTTTTAATTAAATACGTG+GGG | - | chr6.1:22287569-22287588 | MS.gene52921:intron | 15.0% |
!! | AAAAATTGCCATTGAAAAAT+TGG | - | chr6.1:22288126-22288145 | MS.gene52921:CDS | 20.0% |
!! | AAAAGATATGAGAAATTACA+AGG | - | chr6.1:22288514-22288533 | MS.gene52921:CDS | 20.0% |
!! | AAAGATATGAGAAATTACAA+GGG | - | chr6.1:22288515-22288534 | MS.gene52921:CDS | 20.0% |
!! | AATGATAAGAAAGTTTATGT+AGG | - | chr6.1:22288163-22288182 | MS.gene52921:CDS | 20.0% |
!! | ATGATAAGAAAGTTTATGTA+GGG | - | chr6.1:22288164-22288183 | MS.gene52921:CDS | 20.0% |
!! | CATAAAACTCAATTAAGAAT+TGG | + | chr6.1:22287010-22287029 | None:intergenic | 20.0% |
!! | GGATAATATATTCTTATTGA+TGG | - | chr6.1:22286532-22286551 | MS.gene52921:intron | 20.0% |
!! | GTACATTAGTAATCATATAT+AGG | + | chr6.1:22286669-22286688 | None:intergenic | 20.0% |
!! | TTGACCTTATAATGATATTA+TGG | - | chr6.1:22289083-22289102 | MS.gene52921:intron | 20.0% |
!! | TTTAGATCAATGAAATGAAT+GGG | - | chr6.1:22288959-22288978 | MS.gene52921:intron | 20.0% |
!! | TTTGGAGAGAAAAAAAATAA+GGG | - | chr6.1:22286599-22286618 | MS.gene52921:CDS | 20.0% |
!!! | ATCATTTGTCATTTAAATCA+TGG | - | chr6.1:22286845-22286864 | MS.gene52921:CDS | 20.0% |
!!! | CTTTTTTAACAAATGACATA+CGG | + | chr6.1:22288880-22288899 | None:intergenic | 20.0% |
!!! | TAAATTATGTTTTTATGTCG+TGG | - | chr6.1:22287087-22287106 | MS.gene52921:CDS | 20.0% |
!!! | TCTTTTTATTTATGAGTTGT+AGG | - | chr6.1:22287518-22287537 | MS.gene52921:intron | 20.0% |
!!! | TTTTAGATCAATGAAATGAA+TGG | - | chr6.1:22288958-22288977 | MS.gene52921:intron | 20.0% |
! | AATGACAAATGATGTCAAAT+AGG | + | chr6.1:22286838-22286857 | None:intergenic | 25.0% |
! | AGAAACATCAATAGATAACA+AGG | - | chr6.1:22287988-22288007 | MS.gene52921:CDS | 25.0% |
! | AGAGAAAAAAAATAAGGGTT+AGG | - | chr6.1:22286604-22286623 | MS.gene52921:CDS | 25.0% |
! | AGATTTATGGAATAAGTACT+TGG | + | chr6.1:22289622-22289641 | None:intergenic | 25.0% |
! | ATGACAAATGATGTCAAATA+GGG | + | chr6.1:22286837-22286856 | None:intergenic | 25.0% |
! | ATGAGAAAACATAATACGAA+TGG | + | chr6.1:22287915-22287934 | None:intergenic | 25.0% |
! | CTCATAAAGAAGGATATATT+TGG | + | chr6.1:22288914-22288933 | None:intergenic | 25.0% |
! | GATATATTGTAATGCATTGT+TGG | - | chr6.1:22289980-22289999 | MS.gene52921:intron | 25.0% |
! | GTTTGGAGAGAAAAAAAATA+AGG | - | chr6.1:22286598-22286617 | MS.gene52921:CDS | 25.0% |
! | TCTAAATACAATGGTCAAAA+TGG | - | chr6.1:22289742-22289761 | MS.gene52921:intron | 25.0% |
! | TCTTAATGAAGAAAAACTGA+AGG | - | chr6.1:22288570-22288589 | MS.gene52921:CDS | 25.0% |
! | TGAGAAAACATAATACGAAT+GGG | + | chr6.1:22287914-22287933 | None:intergenic | 25.0% |
! | TGCATTTAATATGTTTCTTC+AGG | - | chr6.1:22288779-22288798 | MS.gene52921:intron | 25.0% |
! | TTTATGACTCTGATTACAAA+AGG | - | chr6.1:22287024-22287043 | MS.gene52921:CDS | 25.0% |
!! | AACAATTTTCTACATTACCA+AGG | + | chr6.1:22287291-22287310 | None:intergenic | 25.0% |
!! | AGCTATATGTTGTATCTTTT+TGG | - | chr6.1:22287625-22287644 | MS.gene52921:CDS | 25.0% |
!! | CTTCTAAGAAGAAAATTCAA+AGG | + | chr6.1:22289946-22289965 | None:intergenic | 25.0% |
!! | TAAGTTGTTACTCTTGTTAT+CGG | - | chr6.1:22287460-22287479 | MS.gene52921:CDS | 25.0% |
!! | TGATAATGAAACATGAGAAT+GGG | - | chr6.1:22288317-22288336 | MS.gene52921:CDS | 25.0% |
!! | TTTTCTGCAATTCAAGTATT+GGG | - | chr6.1:22289344-22289363 | MS.gene52921:intron | 25.0% |
!! | TTTTTCTGCAATTCAAGTAT+TGG | - | chr6.1:22289343-22289362 | MS.gene52921:intron | 25.0% |
!!! | GTTAGGTTTTTCAAAACTTA+TGG | - | chr6.1:22286621-22286640 | MS.gene52921:CDS | 25.0% |
!!! | TGTTTTTTGAATTCGATCTT+TGG | - | chr6.1:22286511-22286530 | MS.gene52921:intron | 25.0% |
!!! | TTTATGTAGGGTATTTTGTT+CGG | - | chr6.1:22288176-22288195 | MS.gene52921:CDS | 25.0% |
AACAAAGGGTCTAAATACAA+TGG | - | chr6.1:22289733-22289752 | MS.gene52921:intron | 30.0% | |
AATCAAGCATCTCATAAAGA+AGG | + | chr6.1:22288924-22288943 | None:intergenic | 30.0% | |
ACATACACATTTGTGAACTT+AGG | + | chr6.1:22288220-22288239 | None:intergenic | 30.0% | |
ATCATGAATGATGTTGAACA+TGG | + | chr6.1:22287250-22287269 | None:intergenic | 30.0% | |
ATTGCCATTGAAAAATTGGA+TGG | - | chr6.1:22288130-22288149 | MS.gene52921:CDS | 30.0% | |
CATCAGTATATGATTCAGAA+AGG | + | chr6.1:22288249-22288268 | None:intergenic | 30.0% | |
CTACTCAAGAAAATCAACAT+CGG | - | chr6.1:22289890-22289909 | MS.gene52921:intron | 30.0% | |
GGATTCTTTAATATTGTGTC+GGG | - | chr6.1:22287118-22287137 | MS.gene52921:intron | 30.0% | |
GGGATTCTTTAATATTGTGT+CGG | - | chr6.1:22287117-22287136 | MS.gene52921:intron | 30.0% | |
TACTCAAGAAAATCAACATC+GGG | - | chr6.1:22289891-22289910 | MS.gene52921:intron | 30.0% | |
TGCGCATAATAAAATTGTTG+CGG | + | chr6.1:22289407-22289426 | None:intergenic | 30.0% | |
TGTAGGTTATGTTATAAGCA+TGG | - | chr6.1:22287535-22287554 | MS.gene52921:intron | 30.0% | |
TGTGGAAATATCATAAACCT+TGG | - | chr6.1:22286943-22286962 | MS.gene52921:CDS | 30.0% | |
TTCTGAATCATATACTGATG+AGG | - | chr6.1:22288249-22288268 | MS.gene52921:CDS | 30.0% | |
TTGTATTTAGACCCTTTGTT+CGG | + | chr6.1:22289733-22289752 | None:intergenic | 30.0% | |
TTGTGTTAATGAAGTGATTG+TGG | - | chr6.1:22286925-22286944 | MS.gene52921:CDS | 30.0% | |
! | AATGGGAACTCTAAATGTTT+TGG | - | chr6.1:22288334-22288353 | MS.gene52921:CDS | 30.0% |
! | CAACAATTTTATTATGCGCA+AGG | - | chr6.1:22289407-22289426 | MS.gene52921:intron | 30.0% |
! | GACTCTTATCAATGTTTTTC+AGG | + | chr6.1:22288552-22288571 | None:intergenic | 30.0% |
! | GTAGAAGTTTGATGATATGA+TGG | - | chr6.1:22289193-22289212 | MS.gene52921:intron | 30.0% |
! | GTGATAATGAAACATGAGAA+TGG | - | chr6.1:22288316-22288335 | MS.gene52921:CDS | 30.0% |
! | TTTTTATGTCGTGGTTAAGT+CGG | - | chr6.1:22287096-22287115 | MS.gene52921:CDS | 30.0% |
ACAGCACAAAATCAGCTTAT+CGG | + | chr6.1:22287701-22287720 | None:intergenic | 35.0% | |
ACCATGATGGTTATTGTCAA+TGG | + | chr6.1:22289830-22289849 | None:intergenic | 35.0% | |
ATGATGGTTATTGTCAATGG+AGG | + | chr6.1:22289827-22289846 | None:intergenic | 35.0% | |
ATTTCTTTAGTGCATGTGAG+TGG | - | chr6.1:22288678-22288697 | MS.gene52921:intron | 35.0% | |
CACAAACACAACAACAATTG+TGG | + | chr6.1:22286807-22286826 | None:intergenic | 35.0% | |
GAAATGAATGGGAAGATGAT+TGG | - | chr6.1:22288970-22288989 | MS.gene52921:intron | 35.0% | |
TATTATGCGCAAGGTACATT+TGG | - | chr6.1:22289416-22289435 | MS.gene52921:intron | 35.0% | |
TCCATTGACAATAACCATCA+TGG | - | chr6.1:22289826-22289845 | MS.gene52921:intron | 35.0% | |
TCTACTCACAAAGCAACATT+TGG | + | chr6.1:22289178-22289197 | None:intergenic | 35.0% | |
TGGAACAATAACATCTTGCA+AGG | - | chr6.1:22288609-22288628 | MS.gene52921:intron | 35.0% | |
TGTATTTAGACCCTTTGTTC+GGG | + | chr6.1:22289732-22289751 | None:intergenic | 35.0% | |
TTCTAGATCACCAACATACA+AGG | + | chr6.1:22286323-22286342 | None:intergenic | 35.0% | |
TTGAACTATGTTACCCTGAA+TGG | - | chr6.1:22287884-22287903 | MS.gene52921:CDS | 35.0% | |
! | AAGCAGCTTTTCAACACTTT+TGG | - | chr6.1:22288277-22288296 | MS.gene52921:CDS | 35.0% |
! | ATTGTTGGTTAAACAGATGC+TGG | - | chr6.1:22289995-22290014 | MS.gene52921:CDS | 35.0% |
! | GACAAGAATGTTGCTTGAAA+TGG | - | chr6.1:22290076-22290095 | MS.gene52921:CDS | 35.0% |
! | TTCAAAGGCATGGAAATCTA+GGG | - | chr6.1:22289540-22289559 | MS.gene52921:intron | 35.0% |
! | TTTTATGTCGTGGTTAAGTC+GGG | - | chr6.1:22287097-22287116 | MS.gene52921:CDS | 35.0% |
!! | AAGTGTTGAAAAGCTGCTTA+AGG | + | chr6.1:22288276-22288295 | None:intergenic | 35.0% |
!! | ATTCAAGTATTGGGAAATGC+TGG | - | chr6.1:22289353-22289372 | MS.gene52921:intron | 35.0% |
!! | CATGCCATCCAATTTTTCAA+TGG | + | chr6.1:22288137-22288156 | None:intergenic | 35.0% |
!! | GGCGTTACATGATACTTTTT+CGG | - | chr6.1:22288009-22288028 | MS.gene52921:CDS | 35.0% |
!! | TGTATGTTGGTGATCTAGAA+GGG | - | chr6.1:22286323-22286342 | MS.gene52921:CDS | 35.0% |
!! | TTGTATGTTGGTGATCTAGA+AGG | - | chr6.1:22286322-22286341 | MS.gene52921:CDS | 35.0% |
!!! | ATGGGAAGGTTTTATTTGTC+GGG | - | chr6.1:22288428-22288447 | MS.gene52921:CDS | 35.0% |
!!! | CATGATACTTTTTCGGCTTT+TGG | - | chr6.1:22288016-22288035 | MS.gene52921:CDS | 35.0% |
!!! | GATGGGAAGGTTTTATTTGT+CGG | - | chr6.1:22288427-22288446 | MS.gene52921:CDS | 35.0% |
AACAACAATTGTGGCCACTT+GGG | + | chr6.1:22286798-22286817 | None:intergenic | 40.0% | |
AAGGTTGCTATGGATAGCAA+TGG | - | chr6.1:22288055-22288074 | MS.gene52921:CDS | 40.0% | |
AATGGTCAATCTAGGGGATT+TGG | - | chr6.1:22288073-22288092 | MS.gene52921:CDS | 40.0% | |
ACACAGTCATCTCTTCGTTA+TGG | - | chr6.1:22286427-22286446 | MS.gene52921:CDS | 40.0% | |
ACTGCTGTTGAGAAGTTGAA+TGG | - | chr6.1:22288391-22288410 | MS.gene52921:CDS | 40.0% | |
ATACAATGGTCAAAATGGCG+TGG | - | chr6.1:22289747-22289766 | MS.gene52921:intron | 40.0% | |
ATGCATGTTACACACAACCA+TGG | + | chr6.1:22288711-22288730 | None:intergenic | 40.0% | |
ATGTGAGTGGATATACTCCA+TGG | - | chr6.1:22288691-22288710 | MS.gene52921:intron | 40.0% | |
ATGTTCGCATGTTAGTAACG+CGG | + | chr6.1:22287184-22287203 | None:intergenic | 40.0% | |
CAAATCCTAACAGAAACCAC+TGG | + | chr6.1:22286394-22286413 | None:intergenic | 40.0% | |
CGTAGTCACAATTTCTGATG+TGG | - | chr6.1:22287211-22287230 | MS.gene52921:intron | 40.0% | |
CTAGATTTCCATGCCTTTGA+AGG | + | chr6.1:22289541-22289560 | None:intergenic | 40.0% | |
CTGCAATAGTAATGTGACTG+TGG | - | chr6.1:22287373-22287392 | MS.gene52921:intron | 40.0% | |
CTGCTGTTGAGAAGTTGAAT+GGG | - | chr6.1:22288392-22288411 | MS.gene52921:CDS | 40.0% | |
GAACATTTGTTTCCTCTGGT+CGG | - | chr6.1:22290020-22290039 | MS.gene52921:CDS | 40.0% | |
GATAGCAATGGTCAATCTAG+GGG | - | chr6.1:22288067-22288086 | MS.gene52921:CDS | 40.0% | |
GCTTTCTTGTAAGGTTGCTA+TGG | - | chr6.1:22288045-22288064 | MS.gene52921:CDS | 40.0% | |
GGAAATCTAGGGAATAGGAT+GGG | - | chr6.1:22289551-22289570 | MS.gene52921:intron | 40.0% | |
GGAAGAACATTTGTTTCCTC+TGG | - | chr6.1:22290016-22290035 | MS.gene52921:CDS | 40.0% | |
GGATAGCAATGGTCAATCTA+GGG | - | chr6.1:22288066-22288085 | MS.gene52921:CDS | 40.0% | |
GGCTCAGAAAAAATCGGAAA+GGG | - | chr6.1:22288453-22288472 | MS.gene52921:CDS | 40.0% | |
GGTTTCTGTTAGGATTTGCA+GGG | - | chr6.1:22286396-22286415 | MS.gene52921:CDS | 40.0% | |
TAAATCATCGTTGCGATCCT+TGG | - | chr6.1:22287271-22287290 | MS.gene52921:intron | 40.0% | |
TACAATGGTCAAAATGGCGT+GGG | - | chr6.1:22289748-22289767 | MS.gene52921:intron | 40.0% | |
TCACAAAGCAACATTTGGAC+AGG | + | chr6.1:22289173-22289192 | None:intergenic | 40.0% | |
TCACAAGCTTGTGTAATTGC+AGG | - | chr6.1:22289316-22289335 | MS.gene52921:intron | 40.0% | |
TCAGAAAAAATCGGAAAGGG+AGG | - | chr6.1:22288456-22288475 | MS.gene52921:CDS | 40.0% | |
TGATATGGCGGCAAGTAATT+TGG | + | chr6.1:22289518-22289537 | None:intergenic | 40.0% | |
TGGAAATCTAGGGAATAGGA+TGG | - | chr6.1:22289550-22289569 | MS.gene52921:intron | 40.0% | |
TGGACATGTGCTTTCTTGTA+AGG | - | chr6.1:22288036-22288055 | MS.gene52921:CDS | 40.0% | |
TGGATAGCAATGGTCAATCT+AGG | - | chr6.1:22288065-22288084 | MS.gene52921:CDS | 40.0% | |
TGGGCCACAGAAACATATAA+GGG | + | chr6.1:22289003-22289022 | None:intergenic | 40.0% | |
TGGTTTCTGTTAGGATTTGC+AGG | - | chr6.1:22286395-22286414 | MS.gene52921:CDS | 40.0% | |
TGTTAGACAATGGACCATGA+TGG | + | chr6.1:22289843-22289862 | None:intergenic | 40.0% | |
TTGGGCCACAGAAACATATA+AGG | + | chr6.1:22289004-22289023 | None:intergenic | 40.0% | |
! | AATCCAGTTTTCCGAATGAG+AGG | + | chr6.1:22287944-22287963 | None:intergenic | 40.0% |
! | AATGGGAGCACAACTAATGA+TGG | - | chr6.1:22288409-22288428 | MS.gene52921:CDS | 40.0% |
! | ACTTGCTGGAAATTACCATC+TGG | + | chr6.1:22289584-22289603 | None:intergenic | 40.0% |
! | ATGGGAGCACAACTAATGAT+GGG | - | chr6.1:22288410-22288429 | MS.gene52921:CDS | 40.0% |
! | ATTTTGTTCGGCGTCAAGAA+AGG | - | chr6.1:22288188-22288207 | MS.gene52921:CDS | 40.0% |
! | CTGGGGTTTTACTCAGAAAA+AGG | + | chr6.1:22287063-22287082 | None:intergenic | 40.0% |
! | CTTCAAAGGCATGGAAATCT+AGG | - | chr6.1:22289539-22289558 | MS.gene52921:intron | 40.0% |
! | GAAGCCCTTATATGTTTCTG+TGG | - | chr6.1:22288996-22289015 | MS.gene52921:intron | 40.0% |
! | GTTGTTACTCTTGTTATCGG+TGG | - | chr6.1:22287463-22287482 | MS.gene52921:CDS | 40.0% |
! | TGGATCCATCATTTGACTTC+CGG | + | chr6.1:22289788-22289807 | None:intergenic | 40.0% |
!! | AAGGAGCTGTTTTCTGAGTT+TGG | - | chr6.1:22288589-22288608 | MS.gene52921:intron | 40.0% |
!!! | GAAGGTTTTATTTGTCGGGA+GGG | - | chr6.1:22288432-22288451 | MS.gene52921:CDS | 40.0% |
AACTTCTCAAACGCTCGTGA+TGG | - | chr6.1:22286457-22286476 | MS.gene52921:intron | 45.0% | |
AAGCAACATTTGGACAGGCA+CGG | + | chr6.1:22289168-22289187 | None:intergenic | 45.0% | |
AATCTAGGGAATAGGATGGG+TGG | - | chr6.1:22289554-22289573 | MS.gene52921:intron | 45.0% | |
ACCAACCAATCAGACTGCAA+AGG | - | chr6.1:22290052-22290071 | MS.gene52921:CDS | 45.0% | |
ACCTTTGCAGTCTGATTGGT+TGG | + | chr6.1:22290056-22290075 | None:intergenic | 45.0% | |
AGATCCCGGAAGTCAAATGA+TGG | - | chr6.1:22289780-22289799 | MS.gene52921:intron | 45.0% | |
ATCTAGGGAATAGGATGGGT+GGG | - | chr6.1:22289555-22289574 | MS.gene52921:intron | 45.0% | |
CAACAACAATTGTGGCCACT+TGG | + | chr6.1:22286799-22286818 | None:intergenic | 45.0% | |
CAATTGTAGTCACGTTGCCA+AGG | + | chr6.1:22287411-22287430 | None:intergenic | 45.0% | |
CAGAAACCACTGGAGCAATT+TGG | + | chr6.1:22286384-22286403 | None:intergenic | 45.0% | |
CCATATCACCTTCAAAGGCA+TGG | - | chr6.1:22289530-22289549 | MS.gene52921:intron | 45.0% | |
CTCATCGAGATCCTCTCATT+CGG | - | chr6.1:22287930-22287949 | MS.gene52921:CDS | 45.0% | |
CTTTAGTAGTCACGATGCCA+AGG | + | chr6.1:22286963-22286982 | None:intergenic | 45.0% | |
GACCTCATAACCCGAACAAA+GGG | - | chr6.1:22289719-22289738 | MS.gene52921:intron | 45.0% | |
GAGAACGCTTCCTTGTATGT+TGG | - | chr6.1:22286310-22286329 | MS.gene52921:CDS | 45.0% | |
GATCCTCTCATTCGGAAAAC+TGG | - | chr6.1:22287938-22287957 | MS.gene52921:CDS | 45.0% | |
GGCAATAGTCTATGCGTCAA+TGG | - | chr6.1:22287341-22287360 | MS.gene52921:intron | 45.0% | |
GGCATGGAAATCTAGGGAAT+AGG | - | chr6.1:22289546-22289565 | MS.gene52921:intron | 45.0% | |
GGGCTCAGAAAAAATCGGAA+AGG | - | chr6.1:22288452-22288471 | MS.gene52921:CDS | 45.0% | |
GTTCTCAAATCTTCCAGCAC+CGG | + | chr6.1:22286296-22286315 | None:intergenic | 45.0% | |
GTTGCCAAACACGACTAATG+CGG | - | chr6.1:22287308-22287327 | MS.gene52921:intron | 45.0% | |
GTTGCTTGAAATGGACCAGT+CGG | - | chr6.1:22290085-22290104 | MS.gene52921:CDS | 45.0% | |
GTTTAGCCAAATTGCTCCAG+TGG | - | chr6.1:22286375-22286394 | MS.gene52921:CDS | 45.0% | |
TAGCTGCTGAATCTGAGCTT+TGG | + | chr6.1:22288372-22288391 | None:intergenic | 45.0% | |
TGTCACCTTTGCAGTCTGAT+TGG | + | chr6.1:22290060-22290079 | None:intergenic | 45.0% | |
TTCCTTCGTGAAGCTTCACA+AGG | - | chr6.1:22290170-22290189 | MS.gene52921:CDS | 45.0% | |
TTGCTCCAGTGGTTTCTGTT+AGG | - | chr6.1:22286386-22286405 | MS.gene52921:CDS | 45.0% | |
TTTCCTGTCCTCTTTGCGTT+GGG | + | chr6.1:22289022-22289041 | None:intergenic | 45.0% | |
TTTGCTTGTGTCTCACTTGC+TGG | + | chr6.1:22289598-22289617 | None:intergenic | 45.0% | |
! | ACGAATGGGCTTTCCATTCA+GGG | + | chr6.1:22287900-22287919 | None:intergenic | 45.0% |
! | CCATGCCTTTGAAGGTGATA+TGG | + | chr6.1:22289533-22289552 | None:intergenic | 45.0% |
! | GAGCACAACTAATGATGGGA+AGG | - | chr6.1:22288414-22288433 | MS.gene52921:CDS | 45.0% |
! | GGATCCATCATTTGACTTCC+GGG | + | chr6.1:22289787-22289806 | None:intergenic | 45.0% |
! | TACGAATGGGCTTTCCATTC+AGG | + | chr6.1:22287901-22287920 | None:intergenic | 45.0% |
! | TGCCTTTGAAGGTGATATGG+CGG | + | chr6.1:22289530-22289549 | None:intergenic | 45.0% |
!! | GCAAGCGACTTGTTAGACAA+TGG | + | chr6.1:22289853-22289872 | None:intergenic | 45.0% |
!!! | GGAAGGTTTTATTTGTCGGG+AGG | - | chr6.1:22288431-22288450 | MS.gene52921:CDS | 45.0% |
!!! | TGTTGCTTTTTCCACACCTG+AGG | - | chr6.1:22288842-22288861 | MS.gene52921:intron | 45.0% |
ACCAAAGATCGTTGTTCCCG+CGG | - | chr6.1:22286264-22286283 | MS.gene52921:CDS | 50.0% | |
ACCTGAGGAGCTGAAGATGA+AGG | - | chr6.1:22290130-22290149 | MS.gene52921:CDS | 50.0% | |
ACCTTCATCTTCAGCTCCTC+AGG | + | chr6.1:22290134-22290153 | None:intergenic | 50.0% | |
CAAGTCGCTTGCTTCAGCTT+TGG | - | chr6.1:22289861-22289880 | MS.gene52921:intron | 50.0% | |
CAGGTAATGTCTGATGCTCG+TGG | - | chr6.1:22288798-22288817 | MS.gene52921:intron | 50.0% | |
CCAATCTGATCACCAACTGC+AGG | + | chr6.1:22290197-22290216 | None:intergenic | 50.0% | |
CCACAGTTCATGTCAGGTGT+GGG | - | chr6.1:22289476-22289495 | MS.gene52921:intron | 50.0% | |
CCATCTGATTGAGTCACCTG+AGG | - | chr6.1:22290115-22290134 | MS.gene52921:CDS | 50.0% | |
CCTCAGGTGACTCAATCAGA+TGG | + | chr6.1:22290118-22290137 | None:intergenic | 50.0% | |
CGACCTCATAACCCGAACAA+AGG | - | chr6.1:22289718-22289737 | MS.gene52921:intron | 50.0% | |
CGGGAGGGCTCAGAAAAAAT+CGG | - | chr6.1:22288447-22288466 | MS.gene52921:CDS | 50.0% | |
CGTGACTACAATTGACGCGT+AGG | - | chr6.1:22287417-22287436 | MS.gene52921:CDS | 50.0% | |
CTTTCCTGTCCTCTTTGCGT+TGG | + | chr6.1:22289023-22289042 | None:intergenic | 50.0% | |
GACCTTGTGAAGCTTCACGA+AGG | + | chr6.1:22290175-22290194 | None:intergenic | 50.0% | |
GACTAATGCGGCTGCAATGT+TGG | - | chr6.1:22287320-22287339 | MS.gene52921:intron | 50.0% | |
GAGGTTGTAGCACTTGCAGA+TGG | + | chr6.1:22289808-22289827 | None:intergenic | 50.0% | |
GGACAGGAAAGCTCAATTGC+AGG | - | chr6.1:22289032-22289051 | MS.gene52921:intron | 50.0% | |
GTGGGTATGTCTGTAGATCC+CGG | - | chr6.1:22289766-22289785 | MS.gene52921:intron | 50.0% | |
TACTGCAGCTGCTAATGCGA+TGG | - | chr6.1:22287856-22287875 | MS.gene52921:CDS | 50.0% | |
TGCCGCCATATCACCTTCAA+AGG | - | chr6.1:22289525-22289544 | MS.gene52921:intron | 50.0% | |
TTCATGTCAGGTGTGGGAAC+TGG | - | chr6.1:22289482-22289501 | MS.gene52921:intron | 50.0% | |
TTCCAGCCACAGTTCATGTC+AGG | - | chr6.1:22289470-22289489 | MS.gene52921:intron | 50.0% | |
TTTACTCGCTTCCTCAGGTG+TGG | + | chr6.1:22288856-22288875 | None:intergenic | 50.0% | |
! | GACCCTTTGTTCGGGTTATG+AGG | + | chr6.1:22289724-22289743 | None:intergenic | 50.0% |
!! | CCTGCAGTTGGTGATCAGAT+TGG | - | chr6.1:22290194-22290213 | MS.gene52921:CDS | 50.0% |
!! | TGAAGGTGTCTGAAGCGATG+CGG | - | chr6.1:22290147-22290166 | MS.gene52921:CDS | 50.0% |
AAACCGTATCCGTCTGGCTG+AGG | + | chr6.1:22289452-22289471 | None:intergenic | 55.0% | |
ACGGCTTTACTCGCTTCCTC+AGG | + | chr6.1:22288861-22288880 | None:intergenic | 55.0% | |
CACCTGACATGAACTGTGGC+TGG | + | chr6.1:22289475-22289494 | None:intergenic | 55.0% | |
CACTGCCAAATACGCCCAAG+TGG | - | chr6.1:22286781-22286800 | MS.gene52921:intron | 55.0% | |
CCCACACCTGACATGAACTG+TGG | + | chr6.1:22289479-22289498 | None:intergenic | 55.0% | |
CGGGTTATGAGGTCGCATCT+AGG | + | chr6.1:22289713-22289732 | None:intergenic | 55.0% | |
GCAGCCGCATTAGTCGTGTT+TGG | + | chr6.1:22287315-22287334 | None:intergenic | 55.0% | |
GCCACAGTTCATGTCAGGTG+TGG | - | chr6.1:22289475-22289494 | MS.gene52921:intron | 55.0% | |
GCTTCACAAGGTCCTGCAGT+TGG | - | chr6.1:22290182-22290201 | MS.gene52921:CDS | 55.0% | |
GCTTGAAATGGACCAGTCGG+AGG | - | chr6.1:22290088-22290107 | MS.gene52921:CDS | 55.0% | |
GGTGTAAGACAACCGACCAG+AGG | + | chr6.1:22290035-22290054 | None:intergenic | 55.0% | |
TCAGATGGATGACCTCCGAC+TGG | + | chr6.1:22290103-22290122 | None:intergenic | 55.0% | |
TGTGGCCACTTGGGCGTATT+TGG | + | chr6.1:22286789-22286808 | None:intergenic | 55.0% | |
TTCTGTGGCCCAACGCAAAG+AGG | - | chr6.1:22289011-22289030 | MS.gene52921:intron | 55.0% | |
CAAAACCGACGCCCTTGCTG+CGG | + | chr6.1:22288824-22288843 | None:intergenic | 60.0% | |
CTCATGTCGCCTCAGCCAGA+CGG | - | chr6.1:22289440-22289459 | MS.gene52921:intron | 60.0% | |
GCCGCGGGAACAACGATCTT+TGG | + | chr6.1:22286268-22286287 | None:intergenic | 60.0% | |
GGCTGGAAACCGTATCCGTC+TGG | + | chr6.1:22289458-22289477 | None:intergenic | 60.0% | |
TCGCCTCAGCCAGACGGATA+CGG | - | chr6.1:22289446-22289465 | MS.gene52921:intron | 60.0% | |
TGGCCCAACGCAAAGAGGAC+AGG | - | chr6.1:22289016-22289035 | MS.gene52921:intron | 60.0% | |
! | GTTGTTCCCGCGGCTTTGAC+CGG | - | chr6.1:22286274-22286293 | MS.gene52921:CDS | 60.0% |
AGGATGGGTGGGCGTCCAGA+TGG | - | chr6.1:22289566-22289585 | MS.gene52921:intron | 65.0% | |
GATGCTCGTGGCCGCAGCAA+GGG | - | chr6.1:22288810-22288829 | MS.gene52921:intron | 65.0% | |
TGATGCTCGTGGCCGCAGCA+AGG | - | chr6.1:22288809-22288828 | MS.gene52921:intron | 65.0% | |
!! | TCCAGCACCGGTCAAAGCCG+CGG | + | chr6.1:22286284-22286303 | None:intergenic | 65.0% |
!! | CCAGCACCGGTCAAAGCCGC+GGG | + | chr6.1:22286283-22286302 | None:intergenic | 70.0% |
! | CCCGCGGCTTTGACCGGTGC+TGG | - | chr6.1:22286280-22286299 | MS.gene52921:CDS | 75.0% |
! | CGTGGCCGCAGCAAGGGCGT+CGG | - | chr6.1:22288816-22288835 | MS.gene52921:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 22286244 | 22290223 | 22286244 | ID=MS.gene52921 |
chr6.1 | mRNA | 22286244 | 22290223 | 22286244 | ID=MS.gene52921.t1;Parent=MS.gene52921 |
chr6.1 | exon | 22289989 | 22290223 | 22289989 | ID=MS.gene52921.t1.exon1;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22289989 | 22290223 | 22289989 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22287837 | 22288603 | 22287837 | ID=MS.gene52921.t1.exon2;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22287837 | 22288603 | 22287837 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22287589 | 22287666 | 22287589 | ID=MS.gene52921.t1.exon3;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22287589 | 22287666 | 22287589 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22287414 | 22287503 | 22287414 | ID=MS.gene52921.t1.exon4;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22287414 | 22287503 | 22287414 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22286845 | 22287129 | 22286845 | ID=MS.gene52921.t1.exon5;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22286845 | 22287129 | 22286845 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22286555 | 22286752 | 22286555 | ID=MS.gene52921.t1.exon6;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22286555 | 22286752 | 22286555 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
chr6.1 | exon | 22286244 | 22286456 | 22286244 | ID=MS.gene52921.t1.exon7;Parent=MS.gene52921.t1 |
chr6.1 | CDS | 22286244 | 22286456 | 22286244 | ID=cds.MS.gene52921.t1;Parent=MS.gene52921.t1 |
Gene Sequence |
Protein sequence |