Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03436.t1 | RHN51194.1 | 82.4 | 620 | 83 | 1 | 1 | 594 | 1 | 620 | 3.40E-286 | 993.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03436.t1 | Q05196 | 50.3 | 573 | 260 | 9 | 24 | 574 | 58 | 627 | 2.3e-145 | 517.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03436.t1 | A0A396HH90 | 82.4 | 620 | 83 | 1 | 1 | 594 | 1 | 620 | 2.5e-286 | 993.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03436.t1 | MTR_6g040190 | 82.258 | 620 | 84 | 1 | 1 | 594 | 1 | 620 | 0.0 | 1025 |
MS.gene03436.t1 | MTR_1g097440 | 61.111 | 648 | 193 | 12 | 1 | 596 | 1 | 641 | 0.0 | 748 |
MS.gene03436.t1 | MTR_6g040070 | 71.613 | 465 | 109 | 7 | 99 | 553 | 1 | 452 | 0.0 | 638 |
MS.gene03436.t1 | MTR_6g040070 | 35.495 | 293 | 157 | 7 | 25 | 292 | 15 | 300 | 5.20e-42 | 162 |
MS.gene03436.t1 | MTR_4g085540 | 52.076 | 578 | 239 | 11 | 22 | 574 | 31 | 595 | 0.0 | 545 |
MS.gene03436.t1 | MTR_1g019150 | 56.858 | 452 | 177 | 6 | 12 | 447 | 14 | 463 | 5.74e-175 | 511 |
MS.gene03436.t1 | MTR_3g102040 | 49.735 | 567 | 246 | 12 | 14 | 565 | 13 | 555 | 6.25e-169 | 494 |
MS.gene03436.t1 | MTR_7g102730 | 40.816 | 588 | 284 | 11 | 25 | 574 | 10 | 571 | 2.43e-127 | 388 |
MS.gene03436.t1 | MTR_1g061870 | 44.956 | 456 | 220 | 9 | 4 | 452 | 1 | 432 | 4.90e-119 | 363 |
MS.gene03436.t1 | MTR_1723s0010 | 76.623 | 77 | 17 | 1 | 3 | 78 | 2 | 78 | 1.80e-32 | 120 |
MS.gene03436.t1 | MTR_3g065190 | 37.640 | 178 | 108 | 3 | 19 | 194 | 19 | 195 | 1.73e-31 | 126 |
MS.gene03436.t1 | MTR_3g065190 | 30.645 | 186 | 108 | 5 | 203 | 385 | 28 | 195 | 3.71e-17 | 84.0 |
MS.gene03436.t1 | MTR_1g020080 | 29.545 | 264 | 158 | 6 | 23 | 263 | 95 | 353 | 1.71e-28 | 118 |
MS.gene03436.t1 | MTR_1g020080 | 24.382 | 283 | 200 | 8 | 115 | 389 | 99 | 375 | 4.90e-20 | 93.2 |
MS.gene03436.t1 | MTR_1g020080 | 29.412 | 187 | 110 | 4 | 18 | 187 | 183 | 364 | 2.46e-18 | 88.2 |
MS.gene03436.t1 | MTR_3g101370 | 29.310 | 290 | 173 | 9 | 12 | 275 | 80 | 363 | 3.54e-27 | 114 |
MS.gene03436.t1 | MTR_3g101370 | 23.958 | 288 | 190 | 9 | 115 | 386 | 95 | 369 | 2.16e-18 | 88.2 |
MS.gene03436.t1 | MTR_1889s0010 | 73.846 | 65 | 17 | 0 | 16 | 80 | 11 | 75 | 1.75e-24 | 97.8 |
MS.gene03436.t1 | MTR_8g022050 | 27.562 | 283 | 159 | 7 | 26 | 271 | 63 | 336 | 3.08e-24 | 105 |
MS.gene03436.t1 | MTR_8g022050 | 26.644 | 289 | 176 | 10 | 114 | 373 | 63 | 344 | 1.28e-16 | 82.8 |
MS.gene03436.t1 | MTR_8g022050 | 26.374 | 182 | 114 | 4 | 201 | 381 | 63 | 225 | 3.85e-13 | 72.0 |
MS.gene03436.t1 | MTR_4g131970 | 27.820 | 266 | 162 | 7 | 23 | 263 | 72 | 332 | 2.17e-23 | 103 |
MS.gene03436.t1 | MTR_4g131970 | 23.860 | 285 | 199 | 8 | 115 | 388 | 76 | 353 | 7.51e-20 | 92.8 |
MS.gene03436.t1 | MTR_2g022950 | 26.966 | 267 | 164 | 8 | 23 | 263 | 58 | 319 | 6.05e-23 | 101 |
MS.gene03436.t1 | MTR_2g022950 | 24.390 | 287 | 196 | 9 | 115 | 388 | 62 | 340 | 9.92e-19 | 89.0 |
MS.gene03436.t1 | MTR_2g022950 | 25.510 | 196 | 131 | 7 | 191 | 382 | 51 | 235 | 7.14e-11 | 64.7 |
MS.gene03436.t1 | MTR_4g124940 | 27.473 | 273 | 152 | 7 | 26 | 261 | 47 | 310 | 2.32e-22 | 100 |
MS.gene03436.t1 | MTR_4g124940 | 26.027 | 292 | 180 | 7 | 114 | 381 | 47 | 326 | 5.24e-19 | 90.1 |
MS.gene03436.t1 | MTR_3g109090 | 25.818 | 275 | 157 | 6 | 26 | 262 | 45 | 310 | 1.26e-21 | 98.2 |
MS.gene03436.t1 | MTR_3g109090 | 29.670 | 182 | 108 | 4 | 201 | 381 | 45 | 207 | 1.26e-16 | 82.8 |
MS.gene03436.t1 | MTR_3g109090 | 25.818 | 275 | 157 | 6 | 26 | 262 | 61 | 326 | 1.42e-21 | 98.2 |
MS.gene03436.t1 | MTR_3g109090 | 29.670 | 182 | 108 | 4 | 201 | 381 | 61 | 223 | 1.40e-16 | 82.8 |
MS.gene03436.t1 | MTR_2g097960 | 25.510 | 294 | 165 | 8 | 13 | 262 | 8 | 291 | 7.43e-21 | 95.9 |
MS.gene03436.t1 | MTR_2g097960 | 26.020 | 196 | 128 | 7 | 192 | 383 | 7 | 189 | 4.88e-12 | 68.6 |
MS.gene03436.t1 | MTR_3g075500 | 30.000 | 190 | 111 | 4 | 23 | 196 | 107 | 290 | 9.26e-20 | 90.5 |
MS.gene03436.t1 | MTR_3g075500 | 30.693 | 202 | 125 | 6 | 186 | 385 | 100 | 288 | 1.67e-17 | 84.0 |
MS.gene03436.t1 | MTR_6g040200 | 58.974 | 78 | 30 | 1 | 451 | 528 | 7 | 82 | 2.39e-19 | 83.2 |
MS.gene03436.t1 | MTR_1g020080 | 28.249 | 177 | 120 | 4 | 23 | 192 | 95 | 271 | 2.55e-18 | 86.7 |
MS.gene03436.t1 | MTR_3g101370 | 28.421 | 190 | 126 | 6 | 12 | 192 | 80 | 268 | 7.91e-18 | 84.7 |
MS.gene03436.t1 | MTR_3g101370 | 27.419 | 186 | 119 | 5 | 202 | 383 | 95 | 268 | 4.72e-13 | 70.5 |
MS.gene03436.t1 | MTR_3g075500 | 30.409 | 171 | 97 | 4 | 23 | 177 | 107 | 271 | 1.39e-17 | 83.6 |
MS.gene03436.t1 | MTR_3g075500 | 30.811 | 185 | 113 | 6 | 186 | 368 | 100 | 271 | 3.76e-15 | 76.3 |
MS.gene03436.t1 | MTR_3g075500 | 30.357 | 168 | 106 | 4 | 106 | 262 | 102 | 269 | 5.26e-13 | 70.1 |
MS.gene03436.t1 | MTR_4g104470 | 29.282 | 181 | 119 | 3 | 23 | 195 | 120 | 299 | 2.52e-17 | 83.6 |
MS.gene03436.t1 | MTR_4g104470 | 30.481 | 187 | 115 | 5 | 202 | 385 | 124 | 298 | 3.50e-15 | 77.0 |
MS.gene03436.t1 | MTR_4g104470 | 28.409 | 176 | 117 | 4 | 115 | 282 | 124 | 298 | 1.60e-12 | 68.9 |
MS.gene03436.t1 | MTR_7g118120 | 24.542 | 273 | 182 | 7 | 25 | 285 | 104 | 364 | 3.68e-17 | 85.1 |
MS.gene03436.t1 | MTR_7g118120 | 24.742 | 291 | 192 | 9 | 102 | 386 | 93 | 362 | 1.38e-13 | 73.9 |
MS.gene03436.t1 | MTR_4g052940 | 26.860 | 242 | 161 | 5 | 25 | 258 | 110 | 343 | 7.53e-17 | 84.0 |
MS.gene03436.t1 | MTR_4g052940 | 22.183 | 284 | 187 | 7 | 113 | 387 | 110 | 368 | 1.77e-13 | 73.6 |
MS.gene03436.t1 | MTR_1g056520 | 27.869 | 183 | 118 | 4 | 27 | 196 | 110 | 291 | 2.05e-16 | 80.9 |
MS.gene03436.t1 | MTR_1g056520 | 26.667 | 195 | 125 | 5 | 192 | 379 | 100 | 283 | 1.25e-11 | 66.6 |
MS.gene03436.t1 | MTR_4g052940 | 26.860 | 242 | 161 | 5 | 25 | 258 | 110 | 343 | 2.96e-16 | 80.9 |
MS.gene03436.t1 | MTR_4g052940 | 22.093 | 258 | 167 | 7 | 113 | 361 | 110 | 342 | 8.03e-11 | 64.3 |
MS.gene03436.t1 | MTR_7g010360 | 25.887 | 282 | 192 | 6 | 25 | 298 | 350 | 622 | 8.60e-16 | 81.3 |
MS.gene03436.t1 | MTR_4g122650 | 29.534 | 193 | 118 | 6 | 199 | 387 | 87 | 265 | 4.23e-15 | 79.3 |
MS.gene03436.t1 | MTR_4g122650 | 25.683 | 183 | 130 | 4 | 112 | 288 | 87 | 269 | 3.49e-11 | 66.6 |
MS.gene03436.t1 | MTR_8g007390 | 22.034 | 295 | 190 | 8 | 108 | 394 | 210 | 472 | 1.31e-14 | 77.8 |
MS.gene03436.t1 | MTR_8g007390 | 21.344 | 253 | 180 | 5 | 27 | 268 | 217 | 461 | 4.01e-14 | 76.3 |
MS.gene03436.t1 | MTR_8g007390 | 22.034 | 295 | 190 | 8 | 108 | 394 | 209 | 471 | 1.34e-14 | 77.8 |
MS.gene03436.t1 | MTR_8g007390 | 21.344 | 253 | 180 | 5 | 27 | 268 | 216 | 460 | 4.11e-14 | 76.3 |
MS.gene03436.t1 | MTR_1g064230 | 29.744 | 195 | 110 | 5 | 115 | 283 | 86 | 279 | 2.56e-14 | 73.9 |
MS.gene03436.t1 | MTR_1g064230 | 28.571 | 196 | 127 | 6 | 202 | 386 | 86 | 279 | 3.43e-11 | 64.7 |
MS.gene03436.t1 | MTR_2g022950 | 27.746 | 173 | 116 | 5 | 23 | 186 | 58 | 230 | 2.58e-14 | 73.9 |
MS.gene03436.t1 | MTR_2g022950 | 25.510 | 196 | 131 | 7 | 191 | 382 | 51 | 235 | 4.70e-11 | 64.3 |
MS.gene03436.t1 | MTR_7g106440 | 24.623 | 199 | 121 | 5 | 19 | 197 | 108 | 297 | 5.47e-14 | 73.6 |
MS.gene03436.t1 | MTR_7g106440 | 27.461 | 193 | 110 | 5 | 202 | 379 | 111 | 288 | 1.96e-12 | 68.9 |
MS.gene03436.t1 | MTR_7g094660 | 33.158 | 190 | 108 | 8 | 114 | 288 | 642 | 827 | 5.48e-14 | 75.9 |
MS.gene03436.t1 | MTR_1g045510 | 26.829 | 164 | 114 | 3 | 27 | 185 | 115 | 277 | 5.63e-14 | 73.2 |
MS.gene03436.t1 | MTR_2g022950 | 27.746 | 173 | 116 | 5 | 23 | 186 | 58 | 230 | 2.11e-13 | 71.2 |
MS.gene03436.t1 | MTR_7g109810 | 27.064 | 218 | 141 | 7 | 202 | 413 | 76 | 281 | 2.79e-13 | 72.4 |
MS.gene03436.t1 | MTR_3g027140 | 26.744 | 172 | 112 | 4 | 27 | 185 | 62 | 232 | 4.39e-13 | 69.7 |
MS.gene03436.t1 | MTR_3g027140 | 30.049 | 203 | 128 | 7 | 177 | 372 | 34 | 229 | 1.48e-12 | 68.2 |
MS.gene03436.t1 | MTR_2g026180 | 32.240 | 183 | 102 | 9 | 115 | 279 | 6 | 184 | 5.48e-13 | 72.0 |
MS.gene03436.t1 | MTR_2g026180 | 25.287 | 174 | 121 | 4 | 202 | 369 | 6 | 176 | 1.50e-11 | 67.4 |
MS.gene03436.t1 | MTR_7g107580 | 26.471 | 272 | 163 | 11 | 202 | 469 | 18 | 256 | 9.69e-13 | 70.5 |
MS.gene03436.t1 | MTR_7g104800 | 23.158 | 285 | 180 | 8 | 113 | 387 | 101 | 356 | 1.42e-12 | 70.5 |
MS.gene03436.t1 | MTR_7g104800 | 25.391 | 256 | 161 | 9 | 25 | 264 | 101 | 342 | 2.35e-12 | 69.7 |
MS.gene03436.t1 | MTR_3g055990 | 29.762 | 168 | 96 | 6 | 115 | 262 | 8 | 173 | 1.49e-12 | 70.5 |
MS.gene03436.t1 | MTR_3g055990 | 29.762 | 168 | 96 | 6 | 115 | 262 | 8 | 173 | 1.55e-12 | 70.5 |
MS.gene03436.t1 | MTR_7g109810 | 27.064 | 218 | 141 | 7 | 202 | 413 | 76 | 281 | 1.67e-12 | 70.5 |
MS.gene03436.t1 | MTR_5g030020 | 28.311 | 219 | 144 | 6 | 201 | 415 | 97 | 306 | 2.11e-12 | 68.9 |
MS.gene03436.t1 | MTR_7g107580 | 26.471 | 272 | 163 | 11 | 202 | 469 | 18 | 256 | 2.26e-12 | 69.7 |
MS.gene03436.t1 | MTR_7g107580 | 43.820 | 89 | 46 | 2 | 299 | 386 | 343 | 428 | 2.52e-11 | 66.6 |
MS.gene03436.t1 | MTR_7g013730 | 38.298 | 94 | 54 | 2 | 107 | 199 | 34 | 124 | 2.67e-12 | 67.8 |
MS.gene03436.t1 | MTR_7g109810 | 27.000 | 200 | 133 | 6 | 200 | 393 | 74 | 266 | 3.17e-12 | 67.8 |
MS.gene03436.t1 | MTR_8g076100 | 24.595 | 309 | 191 | 13 | 107 | 404 | 414 | 691 | 3.24e-12 | 70.1 |
MS.gene03436.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 6 | 27 | 277 | 420 | 674 | 5.78e-12 | 69.3 |
MS.gene03436.t1 | MTR_7g099940 | 40.698 | 86 | 50 | 1 | 301 | 385 | 32 | 117 | 3.56e-12 | 64.7 |
MS.gene03436.t1 | MTR_8g076100 | 24.595 | 309 | 191 | 13 | 107 | 404 | 414 | 691 | 4.16e-12 | 69.7 |
MS.gene03436.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 6 | 27 | 277 | 420 | 674 | 6.62e-12 | 69.3 |
MS.gene03436.t1 | MTR_8g076100 | 24.595 | 309 | 191 | 13 | 107 | 404 | 414 | 691 | 5.72e-12 | 69.3 |
MS.gene03436.t1 | MTR_8g076100 | 21.673 | 263 | 186 | 6 | 27 | 277 | 420 | 674 | 8.28e-12 | 68.9 |
MS.gene03436.t1 | MTR_4g086600 | 27.273 | 209 | 140 | 5 | 202 | 407 | 118 | 317 | 6.89e-12 | 68.2 |
MS.gene03436.t1 | MTR_1g073690 | 27.225 | 191 | 105 | 7 | 115 | 279 | 8 | 190 | 1.30e-11 | 67.4 |
MS.gene03436.t1 | MTR_3g084040 | 35.227 | 88 | 55 | 2 | 106 | 192 | 29 | 115 | 1.46e-11 | 63.2 |
MS.gene03436.t1 | MTR_7g013740 | 38.554 | 83 | 50 | 1 | 301 | 382 | 37 | 119 | 2.02e-11 | 62.8 |
MS.gene03436.t1 | MTR_7g107580 | 43.820 | 89 | 46 | 2 | 299 | 386 | 344 | 429 | 2.42e-11 | 66.6 |
MS.gene03436.t1 | MTR_7g107580 | 26.374 | 273 | 163 | 12 | 202 | 469 | 18 | 257 | 6.01e-11 | 65.1 |
MS.gene03436.t1 | MTR_5g097580 | 28.655 | 171 | 94 | 7 | 115 | 262 | 8 | 173 | 3.28e-11 | 66.2 |
MS.gene03436.t1 | MTR_5g097580 | 28.655 | 171 | 94 | 7 | 115 | 262 | 8 | 173 | 3.47e-11 | 66.2 |
MS.gene03436.t1 | MTR_3g080130 | 32.967 | 91 | 57 | 2 | 115 | 201 | 38 | 128 | 5.25e-11 | 61.2 |
MS.gene03436.t1 | MTR_4g109540 | 41.026 | 78 | 45 | 1 | 115 | 191 | 44 | 121 | 6.22e-11 | 63.9 |
MS.gene03436.t1 | MTR_4g109540 | 35.789 | 95 | 60 | 1 | 94 | 187 | 31 | 125 | 8.96e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03436.t1 | AT1G22760 | 53.136 | 574 | 251 | 7 | 10 | 567 | 33 | 604 | 0.0 | 586 |
MS.gene03436.t1 | AT1G71770 | 51.134 | 573 | 255 | 9 | 24 | 574 | 58 | 627 | 0.0 | 553 |
MS.gene03436.t1 | AT1G71770 | 51.134 | 573 | 255 | 9 | 24 | 574 | 58 | 627 | 0.0 | 553 |
MS.gene03436.t1 | AT4G34110 | 55.579 | 466 | 186 | 6 | 2 | 451 | 16 | 476 | 5.88e-177 | 515 |
MS.gene03436.t1 | AT1G49760 | 48.376 | 585 | 248 | 11 | 26 | 574 | 46 | 612 | 7.78e-173 | 506 |
MS.gene03436.t1 | AT1G49760 | 48.376 | 585 | 248 | 11 | 26 | 574 | 46 | 612 | 7.78e-173 | 506 |
MS.gene03436.t1 | AT2G23350 | 48.517 | 573 | 251 | 11 | 25 | 574 | 46 | 597 | 3.49e-168 | 494 |
MS.gene03436.t1 | AT1G34140 | 49.517 | 414 | 193 | 6 | 83 | 490 | 1 | 404 | 6.12e-114 | 346 |
MS.gene03436.t1 | AT1G34140 | 33.101 | 287 | 162 | 6 | 27 | 290 | 33 | 312 | 1.54e-37 | 144 |
MS.gene03436.t1 | AT2G36660 | 45.822 | 371 | 198 | 2 | 25 | 393 | 24 | 393 | 7.24e-109 | 340 |
MS.gene03436.t1 | AT3G16380 | 46.154 | 377 | 193 | 5 | 26 | 395 | 22 | 395 | 1.12e-104 | 327 |
MS.gene03436.t1 | AT3G16380 | 33.681 | 288 | 169 | 6 | 25 | 293 | 112 | 396 | 2.93e-40 | 154 |
MS.gene03436.t1 | AT3G16380 | 36.126 | 191 | 106 | 4 | 19 | 194 | 196 | 385 | 1.02e-24 | 108 |
MS.gene03436.t1 | AT3G16380 | 34.715 | 193 | 110 | 4 | 196 | 387 | 17 | 194 | 3.13e-23 | 104 |
MS.gene03436.t1 | AT2G18510 | 36.517 | 178 | 110 | 3 | 19 | 194 | 19 | 195 | 2.32e-31 | 125 |
MS.gene03436.t1 | AT2G18510 | 30.481 | 187 | 109 | 6 | 202 | 385 | 27 | 195 | 5.73e-16 | 80.5 |
MS.gene03436.t1 | AT1G47490 | 32.222 | 270 | 150 | 9 | 23 | 264 | 99 | 363 | 6.86e-28 | 117 |
MS.gene03436.t1 | AT1G47490 | 25.517 | 290 | 191 | 10 | 115 | 388 | 103 | 383 | 1.02e-20 | 95.5 |
MS.gene03436.t1 | AT1G47490 | 30.058 | 173 | 104 | 6 | 225 | 393 | 129 | 288 | 1.11e-11 | 67.8 |
MS.gene03436.t1 | AT3G19130 | 30.743 | 296 | 161 | 9 | 26 | 282 | 109 | 399 | 4.02e-27 | 114 |
MS.gene03436.t1 | AT3G19130 | 27.010 | 311 | 187 | 11 | 115 | 394 | 110 | 411 | 2.97e-18 | 88.2 |
MS.gene03436.t1 | AT3G19130 | 27.317 | 205 | 135 | 5 | 202 | 403 | 110 | 303 | 4.60e-13 | 72.0 |
MS.gene03436.t1 | AT1G54080 | 28.571 | 273 | 149 | 7 | 26 | 261 | 64 | 327 | 1.57e-26 | 112 |
MS.gene03436.t1 | AT1G54080 | 28.028 | 289 | 168 | 9 | 105 | 367 | 55 | 329 | 3.05e-18 | 87.8 |
MS.gene03436.t1 | AT1G54080 | 28.022 | 182 | 111 | 4 | 201 | 381 | 64 | 226 | 8.56e-15 | 77.4 |
MS.gene03436.t1 | AT1G47500 | 31.111 | 270 | 153 | 9 | 23 | 264 | 101 | 365 | 8.46e-26 | 110 |
MS.gene03436.t1 | AT1G47500 | 24.828 | 290 | 193 | 10 | 115 | 388 | 105 | 385 | 4.51e-19 | 90.5 |
MS.gene03436.t1 | AT1G47500 | 31.443 | 194 | 105 | 5 | 17 | 187 | 187 | 375 | 6.35e-19 | 90.1 |
MS.gene03436.t1 | AT1G47500 | 29.480 | 173 | 105 | 6 | 225 | 393 | 131 | 290 | 3.43e-11 | 66.2 |
MS.gene03436.t1 | AT1G54080 | 28.417 | 278 | 149 | 8 | 26 | 262 | 64 | 332 | 4.81e-25 | 108 |
MS.gene03436.t1 | AT1G54080 | 27.645 | 293 | 168 | 9 | 105 | 367 | 55 | 333 | 3.64e-17 | 84.7 |
MS.gene03436.t1 | AT1G54080 | 27.957 | 186 | 110 | 5 | 201 | 381 | 64 | 230 | 1.87e-13 | 73.2 |
MS.gene03436.t1 | AT3G14100 | 27.473 | 273 | 152 | 6 | 26 | 261 | 60 | 323 | 1.14e-24 | 107 |
MS.gene03436.t1 | AT3G14100 | 27.778 | 270 | 163 | 9 | 114 | 361 | 60 | 319 | 6.21e-18 | 87.0 |
MS.gene03436.t1 | AT3G14100 | 31.148 | 183 | 104 | 5 | 201 | 381 | 60 | 222 | 6.26e-16 | 80.9 |
MS.gene03436.t1 | AT1G49600 | 29.766 | 299 | 171 | 9 | 18 | 282 | 112 | 405 | 4.08e-24 | 105 |
MS.gene03436.t1 | AT1G49600 | 26.625 | 323 | 188 | 13 | 115 | 405 | 121 | 426 | 9.83e-18 | 86.7 |
MS.gene03436.t1 | AT1G49600 | 29.667 | 300 | 172 | 9 | 18 | 283 | 112 | 406 | 1.59e-23 | 104 |
MS.gene03436.t1 | AT1G49600 | 26.688 | 311 | 183 | 12 | 115 | 398 | 121 | 413 | 3.30e-18 | 88.2 |
MS.gene03436.t1 | AT1G49600 | 26.699 | 206 | 137 | 5 | 202 | 404 | 121 | 315 | 4.00e-11 | 65.9 |
MS.gene03436.t1 | AT1G49600 | 29.667 | 300 | 172 | 9 | 18 | 283 | 112 | 406 | 1.59e-23 | 104 |
MS.gene03436.t1 | AT1G49600 | 26.688 | 311 | 183 | 12 | 115 | 398 | 121 | 413 | 3.30e-18 | 88.2 |
MS.gene03436.t1 | AT1G49600 | 26.699 | 206 | 137 | 5 | 202 | 404 | 121 | 315 | 4.00e-11 | 65.9 |
MS.gene03436.t1 | AT1G17370 | 26.429 | 280 | 163 | 7 | 26 | 271 | 55 | 325 | 1.29e-22 | 101 |
MS.gene03436.t1 | AT1G17370 | 25.373 | 268 | 177 | 7 | 114 | 365 | 55 | 315 | 2.21e-17 | 85.1 |
MS.gene03436.t1 | AT1G17370 | 28.022 | 182 | 111 | 4 | 201 | 381 | 55 | 217 | 6.34e-14 | 74.7 |
MS.gene03436.t1 | AT1G17370 | 26.148 | 283 | 163 | 7 | 26 | 271 | 55 | 328 | 2.97e-22 | 100 |
MS.gene03436.t1 | AT1G17370 | 25.830 | 271 | 175 | 8 | 114 | 365 | 55 | 318 | 1.43e-16 | 82.8 |
MS.gene03436.t1 | AT1G17370 | 28.022 | 182 | 111 | 4 | 201 | 381 | 55 | 217 | 6.79e-14 | 74.3 |
MS.gene03436.t1 | AT5G54900 | 25.000 | 292 | 178 | 9 | 26 | 286 | 61 | 342 | 2.39e-21 | 97.1 |
MS.gene03436.t1 | AT5G54900 | 24.497 | 298 | 187 | 11 | 114 | 389 | 61 | 342 | 4.13e-18 | 87.0 |
MS.gene03436.t1 | AT2G37220 | 30.108 | 186 | 102 | 3 | 27 | 185 | 93 | 277 | 7.95e-21 | 93.6 |
MS.gene03436.t1 | AT1G11650 | 25.090 | 279 | 180 | 8 | 8 | 262 | 45 | 318 | 1.46e-20 | 94.7 |
MS.gene03436.t1 | AT1G11650 | 22.069 | 290 | 209 | 7 | 114 | 393 | 63 | 345 | 5.86e-15 | 77.8 |
MS.gene03436.t1 | AT1G11650 | 26.667 | 180 | 109 | 4 | 26 | 187 | 156 | 330 | 4.23e-13 | 72.0 |
MS.gene03436.t1 | AT5G19350 | 25.455 | 275 | 164 | 7 | 23 | 262 | 22 | 290 | 1.21e-19 | 92.0 |
MS.gene03436.t1 | AT4G27000 | 25.940 | 266 | 159 | 8 | 26 | 263 | 81 | 336 | 2.02e-19 | 91.3 |
MS.gene03436.t1 | AT4G27000 | 23.693 | 287 | 197 | 8 | 114 | 388 | 81 | 357 | 1.74e-16 | 82.4 |
MS.gene03436.t1 | AT5G19350 | 26.429 | 280 | 159 | 8 | 23 | 262 | 22 | 294 | 4.18e-19 | 90.5 |
MS.gene03436.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 5.12e-19 | 89.0 |
MS.gene03436.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 4.75e-17 | 83.2 |
MS.gene03436.t1 | AT4G24770 | 31.667 | 180 | 114 | 3 | 23 | 194 | 148 | 326 | 5.12e-19 | 89.0 |
MS.gene03436.t1 | AT4G24770 | 29.947 | 187 | 118 | 4 | 202 | 386 | 152 | 327 | 4.75e-17 | 83.2 |
MS.gene03436.t1 | AT5G50250 | 30.556 | 180 | 116 | 3 | 23 | 194 | 111 | 289 | 7.08e-19 | 87.8 |
MS.gene03436.t1 | AT5G50250 | 29.843 | 191 | 121 | 5 | 197 | 385 | 110 | 289 | 1.54e-15 | 77.8 |
MS.gene03436.t1 | AT5G50250 | 29.775 | 178 | 116 | 4 | 113 | 282 | 113 | 289 | 5.30e-14 | 73.6 |
MS.gene03436.t1 | AT1G11650 | 24.621 | 264 | 170 | 8 | 8 | 247 | 45 | 303 | 3.49e-18 | 86.3 |
MS.gene03436.t1 | AT1G11650 | 22.892 | 249 | 175 | 7 | 114 | 352 | 63 | 304 | 4.45e-12 | 67.8 |
MS.gene03436.t1 | AT1G47490 | 30.890 | 191 | 115 | 7 | 23 | 203 | 99 | 282 | 1.10e-17 | 84.7 |
MS.gene03436.t1 | AT1G47490 | 30.409 | 171 | 102 | 6 | 225 | 391 | 129 | 286 | 7.86e-12 | 67.0 |
MS.gene03436.t1 | AT2G35410 | 29.101 | 189 | 113 | 4 | 202 | 381 | 97 | 273 | 5.09e-17 | 82.8 |
MS.gene03436.t1 | AT2G35410 | 30.061 | 163 | 98 | 3 | 115 | 262 | 97 | 258 | 3.96e-16 | 80.1 |
MS.gene03436.t1 | AT3G52150 | 33.714 | 175 | 107 | 6 | 202 | 372 | 78 | 247 | 1.14e-16 | 80.5 |
MS.gene03436.t1 | AT3G52150 | 27.368 | 190 | 117 | 6 | 13 | 185 | 65 | 250 | 8.70e-13 | 69.3 |
MS.gene03436.t1 | AT3G52150 | 33.714 | 175 | 107 | 6 | 202 | 372 | 78 | 247 | 1.14e-16 | 80.5 |
MS.gene03436.t1 | AT3G52150 | 27.368 | 190 | 117 | 6 | 13 | 185 | 65 | 250 | 8.70e-13 | 69.3 |
MS.gene03436.t1 | AT4G00830 | 24.731 | 279 | 184 | 7 | 113 | 386 | 116 | 373 | 1.40e-16 | 83.2 |
MS.gene03436.t1 | AT4G00830 | 25.632 | 277 | 181 | 8 | 25 | 289 | 116 | 379 | 1.06e-15 | 80.5 |
MS.gene03436.t1 | AT4G00830 | 24.731 | 279 | 184 | 7 | 113 | 386 | 116 | 373 | 1.40e-16 | 83.2 |
MS.gene03436.t1 | AT4G00830 | 25.632 | 277 | 181 | 8 | 25 | 289 | 116 | 379 | 1.06e-15 | 80.5 |
MS.gene03436.t1 | AT4G00830 | 24.731 | 279 | 184 | 7 | 113 | 386 | 116 | 373 | 1.40e-16 | 83.2 |
MS.gene03436.t1 | AT4G00830 | 25.632 | 277 | 181 | 8 | 25 | 289 | 116 | 379 | 1.06e-15 | 80.5 |
MS.gene03436.t1 | AT1G60000 | 28.571 | 168 | 113 | 3 | 24 | 185 | 84 | 250 | 1.76e-16 | 80.1 |
MS.gene03436.t1 | AT1G60000 | 29.240 | 171 | 114 | 4 | 115 | 279 | 87 | 256 | 2.24e-12 | 68.2 |
MS.gene03436.t1 | AT1G47500 | 29.319 | 191 | 118 | 7 | 23 | 203 | 101 | 284 | 3.29e-16 | 80.5 |
MS.gene03436.t1 | AT1G47500 | 30.000 | 170 | 102 | 6 | 225 | 390 | 131 | 287 | 5.02e-11 | 64.7 |
MS.gene03436.t1 | AT3G52380 | 25.134 | 187 | 124 | 3 | 23 | 193 | 114 | 300 | 5.32e-16 | 80.1 |
MS.gene03436.t1 | AT3G52380 | 28.261 | 184 | 128 | 4 | 202 | 383 | 118 | 299 | 8.36e-12 | 67.4 |
MS.gene03436.t1 | AT4G00830 | 25.182 | 274 | 178 | 7 | 25 | 289 | 116 | 371 | 2.79e-15 | 79.3 |
MS.gene03436.t1 | AT4G00830 | 24.275 | 276 | 181 | 6 | 113 | 386 | 116 | 365 | 5.92e-15 | 78.2 |
MS.gene03436.t1 | AT4G00830 | 25.182 | 274 | 178 | 7 | 25 | 289 | 116 | 371 | 2.79e-15 | 79.3 |
MS.gene03436.t1 | AT4G00830 | 24.275 | 276 | 181 | 6 | 113 | 386 | 116 | 365 | 5.92e-15 | 78.2 |
MS.gene03436.t1 | AT4G00830 | 24.286 | 280 | 184 | 8 | 113 | 386 | 116 | 373 | 1.58e-14 | 77.0 |
MS.gene03436.t1 | AT4G00830 | 24.286 | 280 | 181 | 9 | 25 | 289 | 116 | 379 | 1.67e-12 | 70.5 |
MS.gene03436.t1 | AT1G45100 | 25.763 | 295 | 164 | 7 | 22 | 267 | 155 | 443 | 2.76e-14 | 76.3 |
MS.gene03436.t1 | AT1G45100 | 25.714 | 175 | 113 | 3 | 189 | 361 | 145 | 304 | 2.46e-11 | 66.6 |
MS.gene03436.t1 | AT1G01080 | 30.928 | 194 | 113 | 7 | 107 | 281 | 102 | 293 | 6.77e-14 | 73.2 |
MS.gene03436.t1 | AT5G03580 | 37.500 | 80 | 50 | 0 | 305 | 384 | 18 | 97 | 1.96e-13 | 67.0 |
MS.gene03436.t1 | AT2G47310 | 27.041 | 196 | 131 | 4 | 202 | 393 | 112 | 299 | 2.19e-13 | 73.2 |
MS.gene03436.t1 | AT1G01080 | 30.270 | 185 | 104 | 6 | 107 | 273 | 102 | 279 | 3.14e-13 | 70.9 |
MS.gene03436.t1 | AT1G01080 | 27.647 | 170 | 116 | 5 | 197 | 362 | 105 | 271 | 5.13e-11 | 64.3 |
MS.gene03436.t1 | AT2G44710 | 23.030 | 330 | 206 | 12 | 108 | 417 | 124 | 425 | 5.17e-13 | 72.4 |
MS.gene03436.t1 | AT4G16280 | 26.776 | 183 | 128 | 3 | 109 | 285 | 116 | 298 | 5.34e-13 | 72.0 |
MS.gene03436.t1 | AT4G16280 | 26.178 | 191 | 123 | 4 | 202 | 388 | 122 | 298 | 8.30e-12 | 68.6 |
MS.gene03436.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 1.67e-11 | 67.4 |
MS.gene03436.t1 | AT2G44710 | 23.030 | 330 | 206 | 12 | 108 | 417 | 209 | 510 | 8.21e-13 | 72.0 |
MS.gene03436.t1 | AT2G44710 | 23.030 | 330 | 206 | 12 | 108 | 417 | 209 | 510 | 8.21e-13 | 72.0 |
MS.gene03436.t1 | AT4G16280 | 26.486 | 185 | 130 | 3 | 109 | 287 | 116 | 300 | 8.86e-13 | 72.0 |
MS.gene03436.t1 | AT4G16280 | 26.178 | 191 | 123 | 4 | 202 | 388 | 122 | 298 | 1.15e-11 | 68.2 |
MS.gene03436.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 116 | 273 | 2.49e-11 | 67.4 |
MS.gene03436.t1 | AT4G16280 | 26.776 | 183 | 128 | 3 | 109 | 285 | 41 | 223 | 9.57e-13 | 71.6 |
MS.gene03436.t1 | AT4G16280 | 26.178 | 191 | 123 | 4 | 202 | 388 | 47 | 223 | 1.31e-11 | 68.2 |
MS.gene03436.t1 | AT4G16280 | 27.215 | 158 | 112 | 2 | 21 | 175 | 41 | 198 | 2.26e-11 | 67.4 |
MS.gene03436.t1 | AT5G47620 | 27.835 | 194 | 111 | 7 | 202 | 369 | 8 | 198 | 1.10e-12 | 70.9 |
MS.gene03436.t1 | AT4G36960 | 29.143 | 175 | 109 | 7 | 114 | 281 | 4 | 170 | 1.77e-12 | 69.7 |
MS.gene03436.t1 | AT4G36960 | 29.143 | 175 | 109 | 7 | 114 | 281 | 4 | 170 | 1.77e-12 | 69.7 |
MS.gene03436.t1 | AT5G47620 | 28.177 | 181 | 105 | 8 | 202 | 369 | 8 | 176 | 2.73e-12 | 69.7 |
MS.gene03436.t1 | AT5G47620 | 28.177 | 181 | 105 | 8 | 202 | 369 | 8 | 176 | 2.73e-12 | 69.7 |
MS.gene03436.t1 | AT5G47620 | 28.177 | 181 | 105 | 8 | 202 | 369 | 8 | 176 | 2.73e-12 | 69.7 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 3.35e-12 | 69.3 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 3.35e-12 | 69.3 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 3.35e-12 | 69.3 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 3.35e-12 | 69.3 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 3.35e-12 | 69.3 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 4.30e-12 | 68.9 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 4.30e-12 | 68.9 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 4.30e-12 | 68.9 |
MS.gene03436.t1 | AT5G55550 | 28.042 | 189 | 104 | 7 | 115 | 279 | 8 | 188 | 4.30e-12 | 68.9 |
MS.gene03436.t1 | AT1G17640 | 27.174 | 184 | 118 | 5 | 202 | 383 | 68 | 237 | 7.46e-12 | 67.8 |
MS.gene03436.t1 | AT1G17640 | 27.174 | 184 | 118 | 5 | 202 | 383 | 68 | 237 | 7.46e-12 | 67.8 |
MS.gene03436.t1 | AT1G17640 | 27.174 | 184 | 118 | 5 | 202 | 383 | 68 | 237 | 7.46e-12 | 67.8 |
MS.gene03436.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 9.96e-12 | 68.2 |
MS.gene03436.t1 | AT3G07810 | 32.240 | 183 | 102 | 8 | 115 | 279 | 8 | 186 | 1.01e-11 | 68.2 |
MS.gene03436.t1 | AT1G58470 | 30.178 | 169 | 86 | 4 | 115 | 253 | 8 | 174 | 1.40e-11 | 67.0 |
MS.gene03436.t1 | AT1G58470 | 30.178 | 169 | 86 | 4 | 115 | 253 | 8 | 174 | 1.40e-11 | 67.0 |
MS.gene03436.t1 | AT3G04500 | 35.484 | 93 | 56 | 2 | 306 | 394 | 139 | 231 | 2.61e-11 | 64.7 |
MS.gene03436.t1 | AT3G46020 | 30.000 | 90 | 62 | 1 | 304 | 392 | 7 | 96 | 3.46e-11 | 60.8 |
MS.gene03436.t1 | AT3G23830 | 36.250 | 80 | 50 | 1 | 304 | 382 | 35 | 114 | 4.42e-11 | 61.2 |
MS.gene03436.t1 | AT3G23830 | 36.250 | 80 | 50 | 1 | 304 | 382 | 35 | 114 | 4.42e-11 | 61.2 |
MS.gene03436.t1 | AT1G01080 | 27.647 | 170 | 116 | 5 | 197 | 362 | 105 | 271 | 5.75e-11 | 64.3 |
MS.gene03436.t1 | AT2G37510 | 38.158 | 76 | 46 | 1 | 295 | 369 | 25 | 100 | 5.93e-11 | 61.2 |
MS.gene03436.t1 | AT3G13224 | 27.742 | 155 | 104 | 4 | 113 | 261 | 19 | 171 | 7.00e-11 | 64.7 |
MS.gene03436.t1 | AT3G13224 | 28.105 | 153 | 102 | 4 | 115 | 261 | 12 | 162 | 7.53e-11 | 64.7 |
Find 131 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGGAGCTGTTCTCTGATTT+TGG | 0.143169 | 6.2:+35229077 | MS.gene03436:CDS |
TACGAATGGGCTTTCCATTC+AGG | 0.215326 | 6.2:-35228386 | None:intergenic |
TTCCAGCCACAGTTCATTTC+AGG | 0.232782 | 6.2:+35230000 | MS.gene03436:CDS |
GATCCTTTCATTCGGAAAAC+TGG | 0.282292 | 6.2:+35228426 | MS.gene03436:CDS |
AATGGGAACTCTAAATGTTT+TGG | 0.284735 | 6.2:+35228822 | MS.gene03436:CDS |
TTGTATTTAGACCCTTGGTT+TGG | 0.319716 | 6.2:-35230260 | None:intergenic |
TCTAAATACAATGGTCAAAA+TGG | 0.321666 | 6.2:+35230272 | MS.gene03436:CDS |
TGATATGGAAGGATGTAATT+TGG | 0.327195 | 6.2:-35230045 | None:intergenic |
TTTGCTGCTGTCGTACTTGC+TGG | 0.335337 | 6.2:-35230125 | None:intergenic |
TGTATTTAGACCCTTGGTTT+GGG | 0.336427 | 6.2:-35230259 | None:intergenic |
CCCTGCCTCTGAAGGTGATA+TGG | 0.339221 | 6.2:-35230060 | None:intergenic |
AAACTCACTTGCTTCAACTT+TGG | 0.343816 | 6.2:+35230391 | MS.gene03436:CDS |
GCCGCTGGAACCACTATCTT+TGG | 0.349978 | 6.2:-35227073 | None:intergenic |
ACCTTTGCTGTCTGATTGCT+TGG | 0.361267 | 6.2:-35230664 | None:intergenic |
TGCTCCAGTCGTTTCTGTTA+AGG | 0.361385 | 6.2:+35227195 | MS.gene03436:CDS |
TACAGCTTTGCTTGCTTCCT+CGG | 0.365876 | 6.2:-35229349 | None:intergenic |
TTGGATGGCATGCTGATAAA+TGG | 0.369343 | 6.2:+35228633 | MS.gene03436:CDS |
AATGGTCAATCTAGGGGATA+TGG | 0.372328 | 6.2:+35228561 | MS.gene03436:CDS |
TTGAACTATGTTACCCTGAA+TGG | 0.377843 | 6.2:+35228372 | MS.gene03436:CDS |
CTGGGCCACAGAAACATATA+GGG | 0.378332 | 6.2:-35229500 | None:intergenic |
TGGATAGCAATGGTCAATCT+AGG | 0.378409 | 6.2:+35228553 | MS.gene03436:CDS |
GACCATTGTATTTAGACCCT+TGG | 0.384743 | 6.2:-35230265 | None:intergenic |
TGGAAATGTGCTTTCTTGTA+AGG | 0.392841 | 6.2:+35228524 | MS.gene03436:CDS |
GTGGTTCCAGCGGCTTTAAC+CGG | 0.395798 | 6.2:+35227082 | MS.gene03436:CDS |
TTCATTTCAGGTGTTGGAAC+TGG | 0.400070 | 6.2:+35230012 | MS.gene03436:CDS |
GCTGGGCCACAGAAACATAT+AGG | 0.412544 | 6.2:-35229501 | None:intergenic |
CTCATCGAGATCCTTTCATT+CGG | 0.415929 | 6.2:+35228418 | MS.gene03436:CDS |
AGAAAGCACATTTCCAAAAT+CGG | 0.416631 | 6.2:-35228517 | None:intergenic |
GACCCTTGGTTTGGGTTATG+AGG | 0.420980 | 6.2:-35230251 | None:intergenic |
ACGAATGGGCTTTCCATTCA+GGG | 0.428554 | 6.2:-35228385 | None:intergenic |
TAGCTGCTGAATCTGAGCTT+TGG | 0.448697 | 6.2:-35228857 | None:intergenic |
GAAATGAATGGAAAGATGAT+TGG | 0.448870 | 6.2:+35229469 | MS.gene03436:CDS |
CCAGCGGCTTTAACCGGTGC+TGG | 0.449211 | 6.2:+35227088 | MS.gene03436:CDS |
CACCTGAAATGAACTGTGGC+TGG | 0.449242 | 6.2:-35230002 | None:intergenic |
CAAGTCTTTGTACACTTGAA+TGG | 0.449373 | 6.2:-35229909 | None:intergenic |
CCACAGTTCATTTCAGGTGT+TGG | 0.450453 | 6.2:+35230006 | MS.gene03436:CDS |
ATGGGAAAGTTCTATTTGTC+GGG | 0.450813 | 6.2:+35228916 | MS.gene03436:CDS |
TGATGCTCGTGGCCGTAGCA+AGG | 0.453334 | 6.2:+35229299 | MS.gene03436:CDS |
TCGTCTCAGCCAAACGGATA+CGG | 0.457960 | 6.2:+35229976 | MS.gene03436:CDS |
AGATAGAAAAGCTCAATTGC+AGG | 0.460306 | 6.2:+35229531 | MS.gene03436:CDS |
ATTGAGGCGATTCGATTCCT+TGG | 0.460513 | 6.2:+35230688 | MS.gene03436:CDS |
CGTGGCCGTAGCAAGGGCTT+CGG | 0.462959 | 6.2:+35229306 | MS.gene03436:CDS |
CTCGATGTCCCTGCCTCTGA+AGG | 0.465894 | 6.2:-35230068 | None:intergenic |
ACAGCTTTGCTTGCTTCCTC+GGG | 0.470452 | 6.2:-35229348 | None:intergenic |
AGAACATTTATATCCTCTGC+TGG | 0.472397 | 6.2:+35230630 | MS.gene03436:CDS |
GGATTCATTGTTTGACTGCC+GGG | 0.473401 | 6.2:-35230314 | None:intergenic |
TCCATATCACCTTCAGAGGC+AGG | 0.475318 | 6.2:+35230059 | MS.gene03436:CDS |
GGCTGGAAACCGTATCCGTT+TGG | 0.476240 | 6.2:-35229985 | None:intergenic |
CAGAAACGACTGGAGCAATC+TGG | 0.478644 | 6.2:-35227189 | None:intergenic |
TTGTACACTTGAATGGTATC+CGG | 0.478650 | 6.2:-35229902 | None:intergenic |
CCAGCACCGGTTAAAGCCGC+TGG | 0.479450 | 6.2:-35227088 | None:intergenic |
GCTTTCTTGTAAGGTTGCTA+TGG | 0.481734 | 6.2:+35228533 | MS.gene03436:CDS |
CATCAGTGTATGTTTCAGAA+AGG | 0.482201 | 6.2:-35228734 | None:intergenic |
AATGGGAGCACAACTAATGA+TGG | 0.484741 | 6.2:+35228897 | MS.gene03436:CDS |
TTTGCTTGCTTCCTCGGGAG+TGG | 0.484995 | 6.2:-35229343 | None:intergenic |
AATGGTAAGAAAGTTTATGT+AGG | 0.485281 | 6.2:+35228651 | MS.gene03436:CDS |
GATGGGAAAGTTCTATTTGT+CGG | 0.494432 | 6.2:+35228915 | MS.gene03436:CDS |
GGCAGGGACATCGAGGGAAT+AGG | 0.496250 | 6.2:+35230076 | MS.gene03436:CDS |
GGATAGCAATGGTCAATCTA+GGG | 0.497370 | 6.2:+35228554 | MS.gene03436:CDS |
GACTTCATCACCAAAGATAG+TGG | 0.497598 | 6.2:+35227063 | MS.gene03436:CDS |
TGGATTCATTGTTTGACTGC+CGG | 0.497855 | 6.2:-35230315 | None:intergenic |
CGGGAGGGCTCAGAGAAAAT+CGG | 0.502917 | 6.2:+35228935 | MS.gene03436:CDS |
CAAGTATCAGGTGGAAATGC+CGG | 0.504373 | 6.2:+35229883 | MS.gene03436:CDS |
CATCGAGGGAATAGGATGGG+TGG | 0.507712 | 6.2:+35230084 | MS.gene03436:CDS |
AAGTGTTGAAAAGCTGCTTA+AGG | 0.508202 | 6.2:-35228761 | None:intergenic |
CAGATGATGCAGTTATCTCT+TGG | 0.508402 | 6.2:+35227229 | MS.gene03436:CDS |
TGAGAAAACATAATACGAAT+GGG | 0.509410 | 6.2:-35228399 | None:intergenic |
AACTTCTCCAATGCTCGTGA+TGG | 0.509824 | 6.2:+35227265 | MS.gene03436:CDS |
CTCATTTCGTCTCAGCCAAA+CGG | 0.510364 | 6.2:+35229970 | MS.gene03436:CDS |
ACATACACATTAGTGAACTT+AGG | 0.510507 | 6.2:-35228705 | None:intergenic |
ATACAAACCATCACGAGCAT+TGG | 0.514373 | 6.2:-35227272 | None:intergenic |
ATGCAGTTATCTCTTGGCTA+TGG | 0.516836 | 6.2:+35227235 | MS.gene03436:CDS |
ACCATGACGGTGATTGTCAA+TGG | 0.518236 | 6.2:-35230357 | None:intergenic |
ATGAGAAAACATAATACGAA+TGG | 0.522254 | 6.2:-35228400 | None:intergenic |
GATGCTCGTGGCCGTAGCAA+GGG | 0.526704 | 6.2:+35229300 | MS.gene03436:CDS |
ATGGTAAGAAAGTTTATGTA+GGG | 0.526737 | 6.2:+35228652 | MS.gene03436:CDS |
AATGCTGTTGAGAAGTTGAA+TGG | 0.537368 | 6.2:+35228879 | MS.gene03436:CDS |
GTGATTATGAAGGATGAGAA+TGG | 0.540231 | 6.2:+35228804 | MS.gene03436:CDS |
TGGAACAATAACATCTTGCA+AGG | 0.543016 | 6.2:+35229097 | MS.gene03436:CDS |
TGATTATGAAGGATGAGAAT+GGG | 0.546030 | 6.2:+35228805 | MS.gene03436:CDS |
ATTCTCAAATCTTCCAGCAC+CGG | 0.553987 | 6.2:-35227101 | None:intergenic |
TCAGACAGCAAAGGTGATTG+AGG | 0.556522 | 6.2:+35230672 | MS.gene03436:CDS |
AGGATGGGTGGGCATCCAGC+TGG | 0.557662 | 6.2:+35230096 | MS.gene03436:CDS |
CAAACAATGAATCCATCTGC+AGG | 0.560188 | 6.2:+35230323 | MS.gene03436:CDS |
GAGGTTGCAGCACCTGCAGA+TGG | 0.564964 | 6.2:-35230335 | None:intergenic |
GAGAATGCTTCTTTGTACGT+TGG | 0.569957 | 6.2:+35227118 | MS.gene03436:CDS |
CCAATGTGATCACGAACTGC+AGG | 0.570626 | 6.2:-35230727 | None:intergenic |
ATCGAGGGAATAGGATGGGT+GGG | 0.570681 | 6.2:+35230085 | MS.gene03436:CDS |
TGCCCATAATAAAATTGTTG+CGG | 0.575659 | 6.2:-35229934 | None:intergenic |
ACTTGCTGGAAGTTACCAGC+TGG | 0.576607 | 6.2:-35230111 | None:intergenic |
GTGGATATGTCTGTAGATCC+CGG | 0.577216 | 6.2:+35230296 | MS.gene03436:CDS |
AAAAGATATGAGAAATTACA+AGG | 0.585849 | 6.2:+35229002 | MS.gene03436:CDS |
GGGACATCGAGGGAATAGGA+TGG | 0.597122 | 6.2:+35230080 | MS.gene03436:CDS |
ATGCTGTTGAGAAGTTGAAT+GGG | 0.597414 | 6.2:+35228880 | MS.gene03436:CDS |
TCCTTCCATATCACCTTCAG+AGG | 0.598914 | 6.2:+35230055 | MS.gene03436:CDS |
GGAAAGTTCTATTTGTCGGG+AGG | 0.599440 | 6.2:+35228919 | MS.gene03436:CDS |
TATTGCAGCTGCTAATGCGA+TGG | 0.601570 | 6.2:+35228344 | MS.gene03436:intron |
TCTGCAATTCAAGTATCAGG+TGG | 0.603144 | 6.2:+35229874 | MS.gene03436:CDS |
CAAAACCGAAGCCCTTGCTA+CGG | 0.604667 | 6.2:-35229311 | None:intergenic |
TCTTAATGATGAAAAGCTGA+AGG | 0.607920 | 6.2:+35229058 | MS.gene03436:CDS |
TCCATTGACAATCACCGTCA+TGG | 0.612971 | 6.2:+35230356 | MS.gene03436:CDS |
GAACATTTATATCCTCTGCT+GGG | 0.614538 | 6.2:+35230631 | MS.gene03436:CDS |
ATGGGAGCACAACTAATGAT+GGG | 0.614755 | 6.2:+35228898 | MS.gene03436:CDS |
ATACAATGGTCAAAATGGCG+TGG | 0.615038 | 6.2:+35230277 | MS.gene03436:CDS |
AACAAGTGTTGTGATTATGA+AGG | 0.616535 | 6.2:+35228794 | MS.gene03436:CDS |
TCAGAGAAAATCGGAAAGAG+AGG | 0.618895 | 6.2:+35228944 | MS.gene03436:CDS |
CAAACCTTAACAGAAACGAC+TGG | 0.618906 | 6.2:-35227199 | None:intergenic |
GGACATCGAGGGAATAGGAT+GGG | 0.619886 | 6.2:+35230081 | MS.gene03436:CDS |
CCATATCACCTTCAGAGGCA+GGG | 0.626559 | 6.2:+35230060 | MS.gene03436:CDS |
AGAAACATCAATAGATAACA+AGG | 0.626663 | 6.2:+35228476 | MS.gene03436:CDS |
GAAAGTTCTATTTGTCGGGA+GGG | 0.627850 | 6.2:+35228920 | MS.gene03436:CDS |
GAAGCCCCTATATGTTTCTG+TGG | 0.630341 | 6.2:+35229495 | MS.gene03436:CDS |
GCCTCTGAAGGTGATATGGA+AGG | 0.632703 | 6.2:-35230056 | None:intergenic |
GACTTCTTGAAGCTTCACCA+AGG | 0.637912 | 6.2:-35230705 | None:intergenic |
CAGGTAATGTCTGATGCTCG+TGG | 0.638564 | 6.2:+35229288 | MS.gene03436:intron |
CCTGCAGTTCGTGATCACAT+TGG | 0.640189 | 6.2:+35230727 | MS.gene03436:CDS |
GGTGTAAGACGACCCAGCAG+AGG | 0.642146 | 6.2:-35230643 | None:intergenic |
ACCAAAGATAGTGGTTCCAG+CGG | 0.644085 | 6.2:+35227072 | MS.gene03436:CDS |
CGACCTCATAACCCAAACCA+AGG | 0.648151 | 6.2:+35230248 | MS.gene03436:CDS |
AAGGTTGCTATGGATAGCAA+TGG | 0.649706 | 6.2:+35228543 | MS.gene03436:CDS |
TTCAGAGGCAGGGACATCGA+GGG | 0.651455 | 6.2:+35230070 | MS.gene03436:CDS |
AACCAAGGGTCTAAATACAA+TGG | 0.653471 | 6.2:+35230263 | MS.gene03436:CDS |
CTTCAGAGGCAGGGACATCG+AGG | 0.656911 | 6.2:+35230069 | MS.gene03436:CDS |
TTCTGAAACATACACTGATG+AGG | 0.659321 | 6.2:+35228737 | MS.gene03436:CDS |
TCTTGAAGTGAACGTCAATG+AGG | 0.667625 | 6.2:+35227144 | MS.gene03436:CDS |
GATAGCAATGGTCAATCTAG+GGG | 0.669289 | 6.2:+35228555 | MS.gene03436:CDS |
ACCAAGCAATCAGACAGCAA+AGG | 0.679325 | 6.2:+35230663 | MS.gene03436:CDS |
TGGGCCACAGAAACATATAG+GGG | 0.700145 | 6.2:-35229499 | None:intergenic |
GACCTCATAACCCAAACCAA+GGG | 0.712058 | 6.2:+35230249 | MS.gene03436:CDS |
ATGACGGTGATTGTCAATGG+AGG | 0.724574 | 6.2:-35230354 | None:intergenic |
CCAACACCTGAAATGAACTG+TGG | 0.729227 | 6.2:-35230006 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATGATTATAAATACT+AGG | - | chr6.2:35227538-35227557 | None:intergenic | 10.0% |
!! | AAAAATGATTATAAATACTA+GGG | - | chr6.2:35227537-35227556 | None:intergenic | 10.0% |
!!! | AAAACATAATTTTAAATACT+AGG | - | chr6.2:35227896-35227915 | None:intergenic | 10.0% |
!!! | AAACATAATTTTAAATACTA+GGG | - | chr6.2:35227895-35227914 | None:intergenic | 10.0% |
!!! | GATTATAATGTTTTTTTTTT+AGG | + | chr6.2:35227341-35227360 | MS.gene03436:intron | 10.0% |
!!! | TTATAATGTTTTTTTTTTAG+GGG | + | chr6.2:35227343-35227362 | MS.gene03436:intron | 10.0% |
!! | AAATTTCATATTTCAGAAAA+TGG | - | chr6.2:35229670-35229689 | None:intergenic | 15.0% |
!! | AACAAAAAAACTTAGATTTA+CGG | - | chr6.2:35230165-35230184 | None:intergenic | 15.0% |
!! | GGATAAATCAATTATTTATA+TGG | + | chr6.2:35229615-35229634 | MS.gene03436:intron | 15.0% |
!! | TAAAATTTAATAAGATTTGC+AGG | - | chr6.2:35227476-35227495 | None:intergenic | 15.0% |
!!! | ACAATTTTAATTTTGAATCT+AGG | + | chr6.2:35230223-35230242 | MS.gene03436:intron | 15.0% |
!! | AAAAAAAATGAAAGTAAGCA+TGG | - | chr6.2:35229757-35229776 | None:intergenic | 20.0% |
!! | AAAAGATATGAGAAATTACA+AGG | + | chr6.2:35229002-35229021 | MS.gene03436:CDS | 20.0% |
!! | ATTATTTATATGGTACGATT+TGG | + | chr6.2:35229625-35229644 | MS.gene03436:intron | 20.0% |
!! | CTCATAAAAAAGGTTATATT+TGG | - | chr6.2:35229412-35229431 | None:intergenic | 20.0% |
!! | GATTAATGACATTTAAAAGA+GGG | - | chr6.2:35227970-35227989 | None:intergenic | 20.0% |
!! | TGATTAATGACATTTAAAAG+AGG | - | chr6.2:35227971-35227990 | None:intergenic | 20.0% |
!! | TGGATTTAATATATTTCTTC+AGG | + | chr6.2:35229269-35229288 | MS.gene03436:intron | 20.0% |
!! | TGTTTAGAGAGAAAAAATAA+GGG | + | chr6.2:35227435-35227454 | MS.gene03436:intron | 20.0% |
!! | TTAAATGTCATTAATCATTG+CGG | + | chr6.2:35227974-35227993 | MS.gene03436:intron | 20.0% |
!!! | AAAATTATGTTTTTATGTCG+TGG | + | chr6.2:35227903-35227922 | MS.gene03436:intron | 20.0% |
!!! | ATCCATATATTTTAATTACG+AGG | - | chr6.2:35229599-35229618 | None:intergenic | 20.0% |
!!! | ATGCTTACTTTCATTTTTTT+TGG | + | chr6.2:35229756-35229775 | MS.gene03436:intron | 20.0% |
!!! | TTTTAGATCAATGAAATGAA+TGG | + | chr6.2:35229457-35229476 | MS.gene03436:intron | 20.0% |
! | AATCAAGCATCTCATAAAAA+AGG | - | chr6.2:35229422-35229441 | None:intergenic | 25.0% |
! | AATCCAGTTATTAGTACTTT+CGG | - | chr6.2:35229255-35229274 | None:intergenic | 25.0% |
! | AATGGTAAGAAAGTTTATGT+AGG | + | chr6.2:35228651-35228670 | MS.gene03436:CDS | 25.0% |
! | AGAAACATCAATAGATAACA+AGG | + | chr6.2:35228476-35228495 | MS.gene03436:CDS | 25.0% |
! | AGATTTACGGAATAAATACT+TGG | - | chr6.2:35230152-35230171 | None:intergenic | 25.0% |
! | ATCATTCGTCATTTAAATCA+TGG | + | chr6.2:35227660-35227679 | MS.gene03436:intron | 25.0% |
! | ATGAGAAAACATAATACGAA+TGG | - | chr6.2:35228403-35228422 | None:intergenic | 25.0% |
! | ATGGTAAGAAAGTTTATGTA+GGG | + | chr6.2:35228652-35228671 | MS.gene03436:CDS | 25.0% |
! | CACCTCGTAATTAAAATATA+TGG | + | chr6.2:35229594-35229613 | MS.gene03436:intron | 25.0% |
! | CTGTTTAGAGAGAAAAAATA+AGG | + | chr6.2:35227434-35227453 | MS.gene03436:intron | 25.0% |
! | GAATCATATATTCTTGTTGA+TGG | + | chr6.2:35227365-35227384 | MS.gene03436:intron | 25.0% |
! | TCTAAATACAATGGTCAAAA+TGG | + | chr6.2:35230272-35230291 | MS.gene03436:CDS | 25.0% |
! | TGAGAAAACATAATACGAAT+GGG | - | chr6.2:35228402-35228421 | None:intergenic | 25.0% |
! | TTAAATGACGAATGATGTTA+GGG | - | chr6.2:35227656-35227675 | None:intergenic | 25.0% |
! | TTTAAATGACGAATGATGTT+AGG | - | chr6.2:35227657-35227676 | None:intergenic | 25.0% |
!! | TTTTACATACAATACTGTGT+CGG | + | chr6.2:35230570-35230589 | MS.gene03436:intron | 25.0% |
!!! | AAAAAGTGCCATTGAAAAAT+TGG | + | chr6.2:35228614-35228633 | MS.gene03436:CDS | 25.0% |
!!! | TGTGGAAATATTTTAAACCT+TGG | + | chr6.2:35227758-35227777 | MS.gene03436:intron | 25.0% |
!!! | TTTATGTAGGGTATTTTGTT+CGG | + | chr6.2:35228664-35228683 | MS.gene03436:CDS | 25.0% |
ACATACACATTAGTGAACTT+AGG | - | chr6.2:35228708-35228727 | None:intergenic | 30.0% | |
AGAGAGAAAAAATAAGGGTT+AGG | + | chr6.2:35227440-35227459 | MS.gene03436:intron | 30.0% | |
AGATACAATCTTAGTCACAT+CGG | - | chr6.2:35228044-35228063 | None:intergenic | 30.0% | |
CTACTAAAGCTCTTAAGATT+TGG | + | chr6.2:35227789-35227808 | MS.gene03436:intron | 30.0% | |
GAAATGAATGGAAAGATGAT+TGG | + | chr6.2:35229469-35229488 | MS.gene03436:CDS | 30.0% | |
GGGATTCTTTAATATTGTGT+CGG | + | chr6.2:35227933-35227952 | MS.gene03436:intron | 30.0% | |
TACAACAGCTTAATTGTGTT+GGG | + | chr6.2:35228078-35228097 | MS.gene03436:intron | 30.0% | |
TCTTAATGATGAAAAGCTGA+AGG | + | chr6.2:35229058-35229077 | MS.gene03436:CDS | 30.0% | |
TGATATGGAAGGATGTAATT+TGG | - | chr6.2:35230048-35230067 | None:intergenic | 30.0% | |
TGATTATGAAGGATGAGAAT+GGG | + | chr6.2:35228805-35228824 | MS.gene03436:CDS | 30.0% | |
TGCCCATAATAAAATTGTTG+CGG | - | chr6.2:35229937-35229956 | None:intergenic | 30.0% | |
TTGTGTTAATGAAGTGATTG+TGG | + | chr6.2:35227740-35227759 | MS.gene03436:intron | 30.0% | |
! | AACAAGTGTTGTGATTATGA+AGG | + | chr6.2:35228794-35228813 | MS.gene03436:CDS | 30.0% |
! | AATGGGAACTCTAAATGTTT+TGG | + | chr6.2:35228822-35228841 | MS.gene03436:CDS | 30.0% |
! | AGAAAGCACATTTCCAAAAT+CGG | - | chr6.2:35228520-35228539 | None:intergenic | 30.0% |
! | CAACAATTTTATTATGGGCA+AGG | + | chr6.2:35229937-35229956 | MS.gene03436:CDS | 30.0% |
! | CTAGGGTTTTACTCATAAAA+AGG | - | chr6.2:35227878-35227897 | None:intergenic | 30.0% |
! | CTCCGCAACAATTTTATTAT+GGG | + | chr6.2:35229932-35229951 | MS.gene03436:CDS | 30.0% |
! | TTTTCTGCAATTCAAGTATC+AGG | + | chr6.2:35229871-35229890 | MS.gene03436:CDS | 30.0% |
!! | CATGAAACTTTTTCCGATTT+TGG | + | chr6.2:35228504-35228523 | MS.gene03436:CDS | 30.0% |
!! | TATCCGAAAGTACTAATAAC+TGG | + | chr6.2:35229249-35229268 | MS.gene03436:intron | 30.0% |
AAACTCACTTGCTTCAACTT+TGG | + | chr6.2:35230391-35230410 | MS.gene03436:CDS | 35.0% | |
AACCAAGGGTCTAAATACAA+TGG | + | chr6.2:35230263-35230282 | MS.gene03436:CDS | 35.0% | |
AATGCTGTTGAGAAGTTGAA+TGG | + | chr6.2:35228879-35228898 | MS.gene03436:CDS | 35.0% | |
ACAACAGCTTAATTGTGTTG+GGG | + | chr6.2:35228079-35228098 | MS.gene03436:intron | 35.0% | |
AGAACATTTATATCCTCTGC+TGG | + | chr6.2:35230630-35230649 | MS.gene03436:CDS | 35.0% | |
AGATAGAAAAGCTCAATTGC+AGG | + | chr6.2:35229531-35229550 | MS.gene03436:CDS | 35.0% | |
ATGCTGTTGAGAAGTTGAAT+GGG | + | chr6.2:35228880-35228899 | MS.gene03436:CDS | 35.0% | |
ATGGGAAAGTTCTATTTGTC+GGG | + | chr6.2:35228916-35228935 | MS.gene03436:CDS | 35.0% | |
ATGTTCACATGATCGTAACA+CGG | - | chr6.2:35228000-35228019 | None:intergenic | 35.0% | |
ATTGTTCGTTAAACAGATGC+TGG | + | chr6.2:35230606-35230625 | MS.gene03436:intron | 35.0% | |
CAAGTCTTTGTACACTTGAA+TGG | - | chr6.2:35229912-35229931 | None:intergenic | 35.0% | |
CACAAACACAACAACAATTG+TGG | - | chr6.2:35227626-35227645 | None:intergenic | 35.0% | |
CATCAGTGTATGTTTCAGAA+AGG | - | chr6.2:35228737-35228756 | None:intergenic | 35.0% | |
GAACATTTATATCCTCTGCT+GGG | + | chr6.2:35230631-35230650 | MS.gene03436:CDS | 35.0% | |
GATGGGAAAGTTCTATTTGT+CGG | + | chr6.2:35228915-35228934 | MS.gene03436:CDS | 35.0% | |
GATGTGACTAAGATTGTATC+TGG | + | chr6.2:35228043-35228062 | MS.gene03436:intron | 35.0% | |
GTACAACAGCTTAATTGTGT+TGG | + | chr6.2:35228077-35228096 | MS.gene03436:intron | 35.0% | |
GTGATTATGAAGGATGAGAA+TGG | + | chr6.2:35228804-35228823 | MS.gene03436:CDS | 35.0% | |
TGGAAATGTGCTTTCTTGTA+AGG | + | chr6.2:35228524-35228543 | MS.gene03436:CDS | 35.0% | |
TGGAACAATAACATCTTGCA+AGG | + | chr6.2:35229097-35229116 | MS.gene03436:CDS | 35.0% | |
TGGATAGGCAAGACAAAAAT+AGG | - | chr6.2:35229722-35229741 | None:intergenic | 35.0% | |
TGTATTTAGACCCTTGGTTT+GGG | - | chr6.2:35230262-35230281 | None:intergenic | 35.0% | |
TTGAACTATGTTACCCTGAA+TGG | + | chr6.2:35228372-35228391 | MS.gene03436:CDS | 35.0% | |
TTGTACACTTGAATGGTATC+CGG | - | chr6.2:35229905-35229924 | None:intergenic | 35.0% | |
TTGTATTTAGACCCTTGGTT+TGG | - | chr6.2:35230263-35230282 | None:intergenic | 35.0% | |
! | AAGCAGCTTTTCAACACTTT+TGG | + | chr6.2:35228765-35228784 | MS.gene03436:CDS | 35.0% |
! | AATCCAGTTTTCCGAATGAA+AGG | - | chr6.2:35228432-35228451 | None:intergenic | 35.0% |
! | AGTGCCATTGAAAAATTGGA+TGG | + | chr6.2:35228618-35228637 | MS.gene03436:CDS | 35.0% |
! | GCTCCGCAACAATTTTATTA+TGG | + | chr6.2:35229931-35229950 | MS.gene03436:CDS | 35.0% |
! | TTTTTATGTCGTGGTTGAGT+CGG | + | chr6.2:35227912-35227931 | MS.gene03436:intron | 35.0% |
!! | AAGCATGGTTCTGAAAGATT+TGG | - | chr6.2:35229742-35229761 | None:intergenic | 35.0% |
!! | AAGTGTTGAAAAGCTGCTTA+AGG | - | chr6.2:35228764-35228783 | None:intergenic | 35.0% |
!! | CATGCCATCCAATTTTTCAA+TGG | - | chr6.2:35228625-35228644 | None:intergenic | 35.0% |
!! | GCAAGTGAGTTTTTAGACAA+CGG | - | chr6.2:35230383-35230402 | None:intergenic | 35.0% |
!! | TGGTTCTGAAAGATTTGGAT+AGG | - | chr6.2:35229737-35229756 | None:intergenic | 35.0% |
!! | TTCTGAAACATACACTGATG+AGG | + | chr6.2:35228737-35228756 | MS.gene03436:CDS | 35.0% |
!! | TTTTCTATCTTGTTTGCGCT+GGG | - | chr6.2:35229521-35229540 | None:intergenic | 35.0% |
AAGGTTGCTATGGATAGCAA+TGG | + | chr6.2:35228543-35228562 | MS.gene03436:CDS | 40.0% | |
AATGGTCAATCTAGGGGATA+TGG | + | chr6.2:35228561-35228580 | MS.gene03436:CDS | 40.0% | |
ATACAAACCATCACGAGCAT+TGG | - | chr6.2:35227275-35227294 | None:intergenic | 40.0% | |
ATACAATGGTCAAAATGGCG+TGG | + | chr6.2:35230277-35230296 | MS.gene03436:CDS | 40.0% | |
ATGCAGTTATCTCTTGGCTA+TGG | + | chr6.2:35227235-35227254 | MS.gene03436:CDS | 40.0% | |
ATGGACGTACACCTATTTCA+AGG | - | chr6.2:35229651-35229670 | None:intergenic | 40.0% | |
ATGGATGTTACACGAAACCA+TGG | - | chr6.2:35229197-35229216 | None:intergenic | 40.0% | |
ATTCTCAAATCTTCCAGCAC+CGG | - | chr6.2:35227104-35227123 | None:intergenic | 40.0% | |
CAAACAATGAATCCATCTGC+AGG | + | chr6.2:35230323-35230342 | MS.gene03436:CDS | 40.0% | |
CAAACCTTAACAGAAACGAC+TGG | - | chr6.2:35227202-35227221 | None:intergenic | 40.0% | |
CAGATGATGCAGTTATCTCT+TGG | + | chr6.2:35227229-35227248 | MS.gene03436:CDS | 40.0% | |
CTCATCGAGATCCTTTCATT+CGG | + | chr6.2:35228418-35228437 | MS.gene03436:CDS | 40.0% | |
GAAAGTTCTATTTGTCGGGA+GGG | + | chr6.2:35228920-35228939 | MS.gene03436:CDS | 40.0% | |
GACCATTGTATTTAGACCCT+TGG | - | chr6.2:35230268-35230287 | None:intergenic | 40.0% | |
GACTTCATCACCAAAGATAG+TGG | + | chr6.2:35227063-35227082 | MS.gene03436:CDS | 40.0% | |
GAGAATGCTTCTTTGTACGT+TGG | + | chr6.2:35227118-35227137 | MS.gene03436:CDS | 40.0% | |
GATAGCAATGGTCAATCTAG+GGG | + | chr6.2:35228555-35228574 | MS.gene03436:CDS | 40.0% | |
GATCCTTTCATTCGGAAAAC+TGG | + | chr6.2:35228426-35228445 | MS.gene03436:CDS | 40.0% | |
GCTTTCTTGTAAGGTTGCTA+TGG | + | chr6.2:35228533-35228552 | MS.gene03436:CDS | 40.0% | |
GGATAGCAATGGTCAATCTA+GGG | + | chr6.2:35228554-35228573 | MS.gene03436:CDS | 40.0% | |
TCACAAGCTTGTGTATTTGC+AGG | + | chr6.2:35229843-35229862 | MS.gene03436:intron | 40.0% | |
TCAGAGAAAATCGGAAAGAG+AGG | + | chr6.2:35228944-35228963 | MS.gene03436:CDS | 40.0% | |
TCTGCAATTCAAGTATCAGG+TGG | + | chr6.2:35229874-35229893 | MS.gene03436:CDS | 40.0% | |
TCTTGAAGTGAACGTCAATG+AGG | + | chr6.2:35227144-35227163 | MS.gene03436:CDS | 40.0% | |
TGGATAGCAATGGTCAATCT+AGG | + | chr6.2:35228553-35228572 | MS.gene03436:CDS | 40.0% | |
TGGATTCATTGTTTGACTGC+CGG | - | chr6.2:35230318-35230337 | None:intergenic | 40.0% | |
TTGGATGGCATGCTGATAAA+TGG | + | chr6.2:35228633-35228652 | MS.gene03436:CDS | 40.0% | |
! | AAGGAGCTGTTCTCTGATTT+TGG | + | chr6.2:35229077-35229096 | MS.gene03436:CDS | 40.0% |
! | AATGGGAGCACAACTAATGA+TGG | + | chr6.2:35228897-35228916 | MS.gene03436:CDS | 40.0% |
! | ATGGGAGCACAACTAATGAT+GGG | + | chr6.2:35228898-35228917 | MS.gene03436:CDS | 40.0% |
! | ATTTTGTTCGGCGTCAAGAA+AGG | + | chr6.2:35228676-35228695 | MS.gene03436:CDS | 40.0% |
! | TTTTAGACAACGGACCATGA+CGG | - | chr6.2:35230373-35230392 | None:intergenic | 40.0% |
! | TTTTATGTCGTGGTTGAGTC+GGG | + | chr6.2:35227913-35227932 | MS.gene03436:intron | 40.0% |
!! | CTTTTCTATCTTGTTTGCGC+TGG | - | chr6.2:35229522-35229541 | None:intergenic | 40.0% |
!! | GTACGATTTGGCCTTGAAAT+AGG | + | chr6.2:35229637-35229656 | MS.gene03436:intron | 40.0% |
!! | TTCATTTCAGGTGTTGGAAC+TGG | + | chr6.2:35230012-35230031 | MS.gene03436:CDS | 40.0% |
AACTTCTCCAATGCTCGTGA+TGG | + | chr6.2:35227265-35227284 | MS.gene03436:CDS | 45.0% | |
ACCAAGCAATCAGACAGCAA+AGG | + | chr6.2:35230663-35230682 | MS.gene03436:CDS | 45.0% | |
ACCATGACGGTGATTGTCAA+TGG | - | chr6.2:35230360-35230379 | None:intergenic | 45.0% | |
ACTGTTGTAGTGCATGTGAG+TGG | + | chr6.2:35229166-35229185 | MS.gene03436:intron | 45.0% | |
ATGACGGTGATTGTCAATGG+AGG | - | chr6.2:35230357-35230376 | None:intergenic | 45.0% | |
ATTGAGGCGATTCGATTCCT+TGG | + | chr6.2:35230688-35230707 | MS.gene03436:CDS | 45.0% | |
CAACAACAATTGTGGCCACT+TGG | - | chr6.2:35227618-35227637 | None:intergenic | 45.0% | |
CAAGTATCAGGTGGAAATGC+CGG | + | chr6.2:35229883-35229902 | MS.gene03436:CDS | 45.0% | |
CCAACACCTGAAATGAACTG+TGG | - | chr6.2:35230009-35230028 | None:intergenic | 45.0% | |
CTCATTTCGTCTCAGCCAAA+CGG | + | chr6.2:35229970-35229989 | MS.gene03436:CDS | 45.0% | |
CTGGGCCACAGAAACATATA+GGG | - | chr6.2:35229503-35229522 | None:intergenic | 45.0% | |
GAAGTGAGCGATGACACAAA+TGG | - | chr6.2:35229216-35229235 | None:intergenic | 45.0% | |
GACCTCATAACCCAAACCAA+GGG | + | chr6.2:35230249-35230268 | MS.gene03436:CDS | 45.0% | |
GACTTCTTGAAGCTTCACCA+AGG | - | chr6.2:35230708-35230727 | None:intergenic | 45.0% | |
GGAAAGTTCTATTTGTCGGG+AGG | + | chr6.2:35228919-35228938 | MS.gene03436:CDS | 45.0% | |
GGATTCATTGTTTGACTGCC+GGG | - | chr6.2:35230317-35230336 | None:intergenic | 45.0% | |
GTGGATATGTCTGTAGATCC+CGG | + | chr6.2:35230296-35230315 | MS.gene03436:CDS | 45.0% | |
TACAGCTTTGCTTGCTTCCT+CGG | - | chr6.2:35229352-35229371 | None:intergenic | 45.0% | |
TAGCTGCTGAATCTGAGCTT+TGG | - | chr6.2:35228860-35228879 | None:intergenic | 45.0% | |
TATTGCAGCTGCTAATGCGA+TGG | + | chr6.2:35228344-35228363 | MS.gene03436:intron | 45.0% | |
TCAGACAGCAAAGGTGATTG+AGG | + | chr6.2:35230672-35230691 | MS.gene03436:CDS | 45.0% | |
TCCATTGACAATCACCGTCA+TGG | + | chr6.2:35230356-35230375 | MS.gene03436:CDS | 45.0% | |
TCCTTCCATATCACCTTCAG+AGG | + | chr6.2:35230055-35230074 | MS.gene03436:CDS | 45.0% | |
TGCTCCAGTCGTTTCTGTTA+AGG | + | chr6.2:35227195-35227214 | MS.gene03436:CDS | 45.0% | |
TGGGCCACAGAAACATATAG+GGG | - | chr6.2:35229502-35229521 | None:intergenic | 45.0% | |
TTCCAGCCACAGTTCATTTC+AGG | + | chr6.2:35230000-35230019 | MS.gene03436:CDS | 45.0% | |
! | ACCAAAGATAGTGGTTCCAG+CGG | + | chr6.2:35227072-35227091 | MS.gene03436:CDS | 45.0% |
! | ACCTTTGCTGTCTGATTGCT+TGG | - | chr6.2:35230667-35230686 | None:intergenic | 45.0% |
! | ACGAATGGGCTTTCCATTCA+GGG | - | chr6.2:35228388-35228407 | None:intergenic | 45.0% |
! | CCACAGTTCATTTCAGGTGT+TGG | + | chr6.2:35230006-35230025 | MS.gene03436:CDS | 45.0% |
! | GAAGCCCCTATATGTTTCTG+TGG | + | chr6.2:35229495-35229514 | MS.gene03436:CDS | 45.0% |
! | TACGAATGGGCTTTCCATTC+AGG | - | chr6.2:35228389-35228408 | None:intergenic | 45.0% |
!! | ATATATATATATATATATGT+TGG | + | chr6.2:35230531-35230550 | MS.gene03436:intron | 5.0% |
!!! | ATTATAATGTTTTTTTTTTA+GGG | + | chr6.2:35227342-35227361 | MS.gene03436:intron | 5.0% |
ACAGCTTTGCTTGCTTCCTC+GGG | - | chr6.2:35229351-35229370 | None:intergenic | 50.0% | |
ATCGAGGGAATAGGATGGGT+GGG | + | chr6.2:35230085-35230104 | MS.gene03436:CDS | 50.0% | |
CAAAACCGAAGCCCTTGCTA+CGG | - | chr6.2:35229314-35229333 | None:intergenic | 50.0% | |
CACCTGAAATGAACTGTGGC+TGG | - | chr6.2:35230005-35230024 | None:intergenic | 50.0% | |
CACTACCAAGTACGTCCAAG+TGG | + | chr6.2:35227600-35227619 | MS.gene03436:intron | 50.0% | |
CAGAAACGACTGGAGCAATC+TGG | - | chr6.2:35227192-35227211 | None:intergenic | 50.0% | |
CAGGTAATGTCTGATGCTCG+TGG | + | chr6.2:35229288-35229307 | MS.gene03436:intron | 50.0% | |
CCAATGTGATCACGAACTGC+AGG | - | chr6.2:35230730-35230749 | None:intergenic | 50.0% | |
CCATATCACCTTCAGAGGCA+GGG | + | chr6.2:35230060-35230079 | MS.gene03436:CDS | 50.0% | |
CCTGCAGTTCGTGATCACAT+TGG | + | chr6.2:35230727-35230746 | MS.gene03436:CDS | 50.0% | |
CGACCTCATAACCCAAACCA+AGG | + | chr6.2:35230248-35230267 | MS.gene03436:CDS | 50.0% | |
CTTTAGTAGTTGCGACGCCA+AGG | - | chr6.2:35227778-35227797 | None:intergenic | 50.0% | |
GCATGTGAGTGGATACTCCA+TGG | + | chr6.2:35229177-35229196 | MS.gene03436:intron | 50.0% | |
GCTGGGCCACAGAAACATAT+AGG | - | chr6.2:35229504-35229523 | None:intergenic | 50.0% | |
GGACATCGAGGGAATAGGAT+GGG | + | chr6.2:35230081-35230100 | MS.gene03436:CDS | 50.0% | |
TAATTGTGTTGGGGCTGAGC+AGG | + | chr6.2:35228088-35228107 | MS.gene03436:intron | 50.0% | |
TCCATATCACCTTCAGAGGC+AGG | + | chr6.2:35230059-35230078 | MS.gene03436:CDS | 50.0% | |
TCGTCTCAGCCAAACGGATA+CGG | + | chr6.2:35229976-35229995 | MS.gene03436:CDS | 50.0% | |
TTTGCTGCTGTCGTACTTGC+TGG | - | chr6.2:35230128-35230147 | None:intergenic | 50.0% | |
! | ACTTGCTGGAAGTTACCAGC+TGG | - | chr6.2:35230114-35230133 | None:intergenic | 50.0% |
! | GCCTCTGAAGGTGATATGGA+AGG | - | chr6.2:35230059-35230078 | None:intergenic | 50.0% |
!! | GACCCTTGGTTTGGGTTATG+AGG | - | chr6.2:35230254-35230273 | None:intergenic | 50.0% |
!!! | TGTTGCTTTTTCCACTCCCG+AGG | + | chr6.2:35229332-35229351 | MS.gene03436:CDS | 50.0% |
CATCGAGGGAATAGGATGGG+TGG | + | chr6.2:35230084-35230103 | MS.gene03436:CDS | 55.0% | |
CGGGAGGGCTCAGAGAAAAT+CGG | + | chr6.2:35228935-35228954 | MS.gene03436:CDS | 55.0% | |
GCCGCTGGAACCACTATCTT+TGG | - | chr6.2:35227076-35227095 | None:intergenic | 55.0% | |
GGCTGGAAACCGTATCCGTT+TGG | - | chr6.2:35229988-35230007 | None:intergenic | 55.0% | |
GGGACATCGAGGGAATAGGA+TGG | + | chr6.2:35230080-35230099 | MS.gene03436:CDS | 55.0% | |
TGTGGCCACTTGGACGTACT+TGG | - | chr6.2:35227608-35227627 | None:intergenic | 55.0% | |
TTCAGAGGCAGGGACATCGA+GGG | + | chr6.2:35230070-35230089 | MS.gene03436:CDS | 55.0% | |
TTTGCTTGCTTCCTCGGGAG+TGG | - | chr6.2:35229346-35229365 | None:intergenic | 55.0% | |
! | CCCTGCCTCTGAAGGTGATA+TGG | - | chr6.2:35230063-35230082 | None:intergenic | 55.0% |
! | GTGGTTCCAGCGGCTTTAAC+CGG | + | chr6.2:35227082-35227101 | MS.gene03436:CDS | 55.0% |
CTCGATGTCCCTGCCTCTGA+AGG | - | chr6.2:35230071-35230090 | None:intergenic | 60.0% | |
CTTCAGAGGCAGGGACATCG+AGG | + | chr6.2:35230069-35230088 | MS.gene03436:CDS | 60.0% | |
GAGGTTGCAGCACCTGCAGA+TGG | - | chr6.2:35230338-35230357 | None:intergenic | 60.0% | |
GATGCTCGTGGCCGTAGCAA+GGG | + | chr6.2:35229300-35229319 | MS.gene03436:CDS | 60.0% | |
GGCAGGGACATCGAGGGAAT+AGG | + | chr6.2:35230076-35230095 | MS.gene03436:CDS | 60.0% | |
GGTGTAAGACGACCCAGCAG+AGG | - | chr6.2:35230646-35230665 | None:intergenic | 60.0% | |
TGATGCTCGTGGCCGTAGCA+AGG | + | chr6.2:35229299-35229318 | MS.gene03436:CDS | 60.0% | |
TGTGTTGGGGCTGAGCAGGT+GGG | + | chr6.2:35228092-35228111 | MS.gene03436:intron | 60.0% | |
TTGTGTTGGGGCTGAGCAGG+TGG | + | chr6.2:35228091-35228110 | MS.gene03436:intron | 60.0% | |
AGGATGGGTGGGCATCCAGC+TGG | + | chr6.2:35230096-35230115 | MS.gene03436:CDS | 65.0% | |
CGTGGCCGTAGCAAGGGCTT+CGG | + | chr6.2:35229306-35229325 | MS.gene03436:CDS | 65.0% | |
! | CCAGCGGCTTTAACCGGTGC+TGG | + | chr6.2:35227088-35227107 | MS.gene03436:CDS | 65.0% |
! | GGGGCTGAGCAGGTGGGTTT+AGG | + | chr6.2:35228098-35228117 | MS.gene03436:intron | 65.0% |
!! | CCAGCACCGGTTAAAGCCGC+TGG | - | chr6.2:35227091-35227110 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 35227052 | 35230756 | 35227052 | ID=MS.gene03436 |
chr6.2 | mRNA | 35227052 | 35230756 | 35227052 | ID=MS.gene03436.t1;Parent=MS.gene03436 |
chr6.2 | exon | 35227052 | 35227286 | 35227052 | ID=MS.gene03436.t1.exon1;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35227052 | 35227286 | 35227052 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35228352 | 35229118 | 35228352 | ID=MS.gene03436.t1.exon2;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35228352 | 35229118 | 35228352 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35229291 | 35229368 | 35229291 | ID=MS.gene03436.t1.exon3;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35229291 | 35229368 | 35229291 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35229463 | 35229552 | 35229463 | ID=MS.gene03436.t1.exon4;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35229463 | 35229552 | 35229463 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35229865 | 35230152 | 35229865 | ID=MS.gene03436.t1.exon5;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35229865 | 35230152 | 35229865 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35230245 | 35230442 | 35230245 | ID=MS.gene03436.t1.exon6;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35230245 | 35230442 | 35230245 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
chr6.2 | exon | 35230622 | 35230756 | 35230622 | ID=MS.gene03436.t1.exon7;Parent=MS.gene03436.t1 |
chr6.2 | CDS | 35230622 | 35230756 | 35230622 | ID=cds.MS.gene03436.t1;Parent=MS.gene03436.t1 |
Gene Sequence |
Protein sequence |